Citrus Sinensis ID: 044471

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
CVFKAVTFINGATGNFSRRLVVAGGGGDGSFPVTLTLERAIPASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTTSNTGRSEFVNAGQLSDNSSRRNVPQKLIPKCIIAFLLHICMLGSYLFL
cccccEEHHHHHccccccEEEEEcccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEcccccEEEEEEEccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEEcccccccccccccEEEEEccccccccccccccccEEEEccccccHHHHHHHcccccccccEEEcccccccccEEEEcccccccEEEEccccccccEEEEEEEEEEccEEEccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccEEccccccccccEEEEEEccccEEEEccccEEEEEcccccEEEEEEEEEcccccEEEEEEEEEEEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcc
ccEEEEHHEccccHHHHHHHHHHHHHHHcccEEEEEcEccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEccccEEEEEEEEcccccEEEcccccccccccccHHHHcccEcHHHcccEEEEEccccHHHHccccccccccccccccEEEEEEcccccccEEEEEcEEEEcEEEEccccccccccEEEEEEEcccccEEEEcccccEEEccccccccHHHHHHHccccccEEEEEEcccccccEEEEEEcEEcccEEEEEccccccEEEEEEEEEEEccEEEEcccccEEcccccEEEEcccEccEEEcHHHHHHHHHHHcccccccccEEEEEccccccccEEEEEEEccEEccccHHHEEEEEcccccEEEEEccccccccEEEEEEEEEccEEEEEEccccEEEEEEcccccEEEEEEccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccc
CVFKAVTFINGATGNFSRRLVVaggggdgsfpVTLTLeraipashKVELSQLIARDRVRHGRLlqsaagvvdfsvegtydpfvvGLYYTkvqlgspprefhvqidtgsdVLWVscsscngcpgtsglqiqlnffdpsssstaslvrcsdqrcslglntadsgcssesnqcsytfqygdgsgtsgyyVADFLHLDtilqgslttnstAQIMFgcstmqtgdltksdravdgifgfgQQSMSVISQLssqgltprvfshclkgdsngggiLVLGeivepnivysplvpsqphynlnlqsisvngqtlsidpsafstssnkgtivdtgtTLAYLTEAAYDPLINAITssvsqsvrpvltkgnhtaifpqisfnfaggASLILNAQEYLIQQNSVGGTAVWCIGIQKiqgqtilgdlvlkdkifvydlagqrigwsnydcsmsvnvsttsntgrsefvnagqlsdnssrrnvpqkliPKCIIAFLLHICMLGSYLFL
CVFKAVTFingatgnfsRRLVVAGGGGDGSFPVTLTLERAIPASHKVELSQLIARDRVRHGRLLqsaagvvdfsvEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTadsgcssesNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSafstssnkgtivDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSttsntgrsefvnagqlsdnssrrnvPQKLIPKCIIAFLLHICMLGSYLFL
CVFKAVTFINGATGNFSRRLVVAGGGGDGSFPVTLTLERAIPASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMsvnvsttsntGRSEFVNAGQLSDNSSRRNVPQKLIPKCIIAFLLHICMLGSYLFL
*VFKAVTFINGATGNFSRRLVVAGGGGDGSFPVTLTLERAIPASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFD*********VRC****CSLG*************QCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLS************GTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNV****************************KLIPKCIIAFLLHICMLGSYLF*
*VFKAVTFINGATGNFS***************************************************************PFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSL*************NQCSYTFQYGDGSGTSGYYVADFLHLDTILQG***TNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYD**************************************PKCIIAFLLHICMLGSYLFL
CVFKAVTFINGATGNFSRRLVVAGGGGDGSFPVTLTLERAIPASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDP**********CSDQRCSLGLNT********SNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTTSNTGRSEFVNAGQLSDNSSRRNVPQKLIPKCIIAFLLHICMLGSYLFL
CVFKAVTFINGATGNFSRRLVVAGGGGDGSFPVTLTLERAIPASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTTSNTGRSEFVNAGQLSDNSSRRNVPQKLIPKCIIAFLLHICMLGSYLFL
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
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CVFKAVTFINGATGNFSRRLVVAGGGGDGSFPVTLTLERAIPASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTTSNTGRSEFVNAGQLSDNSSRRNVPQKLIPKCIIAFLLHICMLGSYLFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query493 2.2.26 [Sep-21-2011]
Q9S9K4475 Aspartic proteinase-like no no 0.787 0.816 0.379 9e-73
Q9LX20528 Aspartic proteinase-like no no 0.764 0.714 0.272 9e-27
Q766C2438 Aspartic proteinase nepen N/A no 0.724 0.815 0.279 6e-26
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.655 0.787 0.265 2e-25
Q766C3437 Aspartic proteinase nepen N/A no 0.713 0.805 0.280 8e-25
Q3EBM5447 Probable aspartic proteas no no 0.683 0.753 0.268 3e-23
Q0IU52410 Aspartic proteinase Asp1 no no 0.665 0.8 0.250 2e-22
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.655 0.646 0.286 2e-20
Q9LZL3453 Aspartic proteinase PCS1 no no 0.651 0.708 0.273 3e-20
Q6XBF8437 Aspartic proteinase CDR1 no no 0.667 0.752 0.284 6e-19
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function desciption
 Score =  274 bits (701), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 159/419 (37%), Positives = 230/419 (54%), Gaps = 31/419 (7%)

Query: 43  ASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHV 102
           A  K  L    + D  RH R+L S    +D  + G      VGLY+TK++LGSPP+E+HV
Sbjct: 34  AGKKKNLEHFKSHDTRRHSRMLAS----IDLPLGGDSRVDSVGLYFTKIKLGSPPKEYHV 89

Query: 103 QIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSG 162
           Q+DTGSD+LW++C  C  CP  + L  +L+ FD ++SST+  V C D  CS  ++ +DS 
Sbjct: 90  QVDTGSDILWINCKPCPKCPTKTNLNFRLSLFDMNASSTSKKVGCDDDFCSF-ISQSDS- 147

Query: 163 CSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQ-IMFGCSTMQTGDL 221
               +  CSY   Y D S + G ++ D L L+ +  G L T    Q ++FGC + Q+G L
Sbjct: 148 -CQPALGCSYHIVYADESTSDGKFIRDMLTLEQV-TGDLKTGPLGQEVVFGCGSDQSGQL 205

Query: 222 TKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVEPNIVY 281
              D AVDG+ GFGQ + SV+SQL++ G   RVFSHCL  +  GGGI  +G +  P +  
Sbjct: 206 GNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCLD-NVKGGGIFAVGVVDSPKVKT 264

Query: 282 SPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLIN 341
           +P+VP+Q HYN+ L  + V+G +L +     S   N GTIVD+GTTLAY  +  YD LI 
Sbjct: 265 TPMVPNQMHYNVMLMGMDVDGTSLDL---PRSIVRNGGTIVDSGTTLAYFPKVLYDSLIE 321

Query: 342 AITSS-------VSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGT 394
            I +        V ++ +      N    FP +SF F     L +   +YL         
Sbjct: 322 TILARQPVKLHIVEETFQCFSFSTNVDEAFPPVSFEFEDSVKLTVYPHDYLFTLEE---- 377

Query: 395 AVWCIGIQ-------KIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTTS 446
            ++C G Q       +     +LGDLVL +K+ VYDL  + IGW++++CS S+ +   S
Sbjct: 378 ELYCFGWQAGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVIGWADHNCSSSIKIKDGS 436

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
224104765468 predicted protein [Populus trichocarpa] 0.926 0.976 0.728 0.0
356543524493 PREDICTED: aspartic proteinase-like prot 0.945 0.945 0.715 0.0
356564743490 PREDICTED: aspartic proteinase-like prot 0.941 0.946 0.717 0.0
297812425493 aspartyl protease family protein [Arabid 0.890 0.890 0.736 0.0
255565531507 Aspartic proteinase Asp1 precursor, puta 0.931 0.905 0.712 0.0
30688682493 aspartyl protease family protein [Arabid 0.890 0.890 0.727 0.0
10177232539 protease-like protein [Arabidopsis thali 0.931 0.851 0.705 0.0
225436397499 PREDICTED: aspartic proteinase-like prot 0.937 0.925 0.732 0.0
297734873484 unnamed protein product [Vitis vinifera] 0.937 0.954 0.732 0.0
449456068500 PREDICTED: aspartic proteinase-like prot 0.898 0.886 0.719 0.0
>gi|224104765|ref|XP_002313558.1| predicted protein [Populus trichocarpa] gi|222849966|gb|EEE87513.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/468 (72%), Positives = 401/468 (85%), Gaps = 11/468 (2%)

Query: 37  LERAIPASHKVELSQLIARDRVRHGRLLQSAA-GVVDFSVEGTYDPFVVGLYYTKVQLGS 95
           LER I A++K++LS+L  RDRVRHGR+LQS+  GVVDF V+GT+DPF+VGLYYT++QLG+
Sbjct: 1   LERGITANYKLKLSKLKERDRVRHGRMLQSSGVGVVDFPVQGTFDPFLVGLYYTRLQLGT 60

Query: 96  PPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLG 155
           PPR+F+VQIDTGSDVLWVSC SCNGCP  SGL I LNFFDP SS TASL+ CSDQRCSLG
Sbjct: 61  PPRDFYVQIDTGSDVLWVSCGSCNGCPVNSGLHIPLNFFDPGSSPTASLISCSDQRCSLG 120

Query: 156 LNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCST 215
           L ++DS CS+++N C Y FQYGDGSGTSGYYV+D LH DT+L GS+  NS+A I+FGCS 
Sbjct: 121 LQSSDSVCSAQNNLCGYNFQYGDGSGTSGYYVSDLLHFDTVLGGSVMNNSSAPIVFGCSA 180

Query: 216 MQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIV 275
           +QTGDLTKSDRAVDGIFGFGQQ MSV+SQL+SQG++PR FSHCLKGD +GGGILVLGEIV
Sbjct: 181 LQTGDLTKSDRAVDGIFGFGQQDMSVVSQLASQGISPRAFSHCLKGDDSGGGILVLGEIV 240

Query: 276 EPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAA 335
           EPNIVY+PLVPSQPHYNLN+QSISVNGQTL+IDPS F TSS++GTI+D+GTTLAYL EAA
Sbjct: 241 EPNIVYTPLVPSQPHYNLNMQSISVNGQTLAIDPSVFGTSSSQGTIIDSGTTLAYLAEAA 300

Query: 336 YDPLINAITSSVSQSVRPVLTKGNH--------TAIFPQISFNFAGGASLILNAQEYLIQ 387
           YDP I+AITS VS SVRP L+KGNH          IFPQ+S NFAGGAS+IL  Q+YLIQ
Sbjct: 301 YDPFISAITSIVSPSVRPYLSKGNHCYLISSSINDIFPQVSLNFAGGASMILIPQDYLIQ 360

Query: 388 QNSVGGTAVWCIGIQKIQGQ--TILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTT 445
           Q+S+GG A+WCIG QKIQGQ  TILGDLVLKDKIFVYD+A QRIGW+NYDCSMSVNVST 
Sbjct: 361 QSSIGGAALWCIGFQKIQGQGITILGDLVLKDKIFVYDIANQRIGWANYDCSMSVNVSTA 420

Query: 446 SNTGRSEFVNAGQLSDNSSRRNVPQKLIPKCIIAFLLHICMLGSYLFL 493
            +TG+SEFVNAG LS+N S +N+P KL P  +++FLLH+ +L  Y+FL
Sbjct: 421 IDTGKSEFVNAGTLSNNGSPKNMPHKLTPVTMMSFLLHMLLLSCYMFL 468

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356543524|ref|XP_003540210.1| PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356564743|ref|XP_003550608.1| PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297812425|ref|XP_002874096.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297319933|gb|EFH50355.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255565531|ref|XP_002523756.1| Aspartic proteinase Asp1 precursor, putative [Ricinus communis] gi|223537060|gb|EEF38696.1| Aspartic proteinase Asp1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|30688682|ref|NP_197676.2| aspartyl protease family protein [Arabidopsis thaliana] gi|110736370|dbj|BAF00154.1| protease-like protein [Arabidopsis thaliana] gi|332005704|gb|AED93087.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|10177232|dbj|BAB10606.1| protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225436397|ref|XP_002272121.1| PREDICTED: aspartic proteinase-like protein 2 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297734873|emb|CBI17107.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449456068|ref|XP_004145772.1| PREDICTED: aspartic proteinase-like protein 2-like [Cucumis sativus] gi|449496218|ref|XP_004160076.1| PREDICTED: aspartic proteinase-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
TAIR|locus:2172661493 AT5G22850 [Arabidopsis thalian 0.890 0.890 0.714 1.2e-175
TAIR|locus:2200023492 AT1G08210 [Arabidopsis thalian 0.908 0.910 0.580 2.7e-139
TAIR|locus:2040545512 AT2G36670 [Arabidopsis thalian 0.904 0.871 0.576 2.5e-136
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.860 0.868 0.405 1.4e-80
TAIR|locus:2198753485 AT1G05840 [Arabidopsis thalian 0.746 0.758 0.395 5.7e-75
TAIR|locus:2183617482 AT5G36260 [Arabidopsis thalian 0.782 0.800 0.394 1.4e-73
TAIR|locus:2101586430 AT3G42550 [Arabidopsis thalian 0.314 0.360 0.503 3.3e-69
TAIR|locus:2200365475 AT1G65240 [Arabidopsis thalian 0.766 0.795 0.391 6.3e-69
TAIR|locus:2167776 631 AT5G43100 [Arabidopsis thalian 0.541 0.423 0.327 1.8e-45
TAIR|locus:2083098 632 AT3G50050 [Arabidopsis thalian 0.716 0.558 0.308 7.4e-41
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1706 (605.6 bits), Expect = 1.2e-175, P = 1.2e-175
 Identities = 323/452 (71%), Positives = 377/452 (83%)

Query:    31 FPVTLTLERAIPASHKVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTK 90
             FP  L LER IPA+H++ELSQL ARD  RHGRLLQS  GV+DF V+GT+DPFVVGLYYTK
Sbjct:    25 FPAALKLERVIPANHEMELSQLKARDEARHGRLLQSLGGVIDFPVDGTFDPFVVGLYYTK 84

Query:    91 VQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQ 150
             ++LG+PPR+F+VQ+DTGSDVLWVSC+SCNGCP TSGLQIQLNFFDP SS TAS + CSDQ
Sbjct:    85 LRLGTPPRDFYVQVDTGSDVLWVSCASCNGCPQTSGLQIQLNFFDPGSSVTASPISCSDQ 144

Query:   151 RCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIM 210
             RCS G+ ++DSGCS ++N C+YTFQYGDGSGTSG+YV+D L  D I+  SL  NSTA ++
Sbjct:   145 RCSWGIQSSDSGCSVQNNLCAYTFQYGDGSGTSGFYVSDVLQFDMIVGSSLVPNSTAPVV 204

Query:   211 FGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILV 270
             FGCST QTGDL KSDRAVDGIFGFGQQ MSVISQL+SQG+ PRVFSHCLKG++ GGGILV
Sbjct:   205 FGCSTSQTGDLVKSDRAVDGIFGFGQQGMSVISQLASQGIAPRVFSHCLKGENGGGGILV 264

Query:   271 LGEIVEPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAY 330
             LGEIVEPN+V++PLVPSQPHYN+NL SISVNGQ L I+PS FSTS+ +GTI+DTGTTLAY
Sbjct:   265 LGEIVEPNMVFTPLVPSQPHYNVNLLSISVNGQALPINPSVFSTSNGQGTIIDTGTTLAY 324

Query:   331 LTEAAYDPLINAITSSVSQSVRPVLTKGNH-----TA---IFPQISFNFAGGASLILNAQ 382
             L+EAAY P + AIT++VSQSVRPV++KGN      T+   IFP +S NFAGGAS+ LN Q
Sbjct:   325 LSEAAYVPFVEAITNAVSQSVRPVVSKGNQCYVITTSVGDIFPPVSLNFAGGASMFLNPQ 384

Query:   383 EYLIQQNSVGGTAVWCIGIQKIQGQ--TILGDLVLKDKIFVYDLAGQRIGWSNYDCSMXX 440
             +YLIQQN+VGGTAVWCIG Q+IQ Q  TILGDLVLKDKIFVYDL GQRIGW+NYDCS   
Sbjct:   385 DYLIQQNNVGGTAVWCIGFQRIQNQGITILGDLVLKDKIFVYDLVGQRIGWANYDCSTSV 444

Query:   441 XXXXXXXXGRSEFVNAGQLSDNSSRRNVPQKL 472
                     GRSE+VNAGQ S+N++    PQKL
Sbjct:   445 NVSATSSSGRSEYVNAGQFSENAA---APQKL 473
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101586 AT3G42550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.6__2272__AT5G22850.1
annotation not avaliable (493 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 4e-62
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 5e-49
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 2e-36
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 2e-36
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 7e-35
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 5e-33
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 4e-29
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 2e-21
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 1e-18
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 6e-18
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 4e-15
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 1e-12
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 1e-12
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-11
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 3e-10
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 5e-10
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 7e-10
cd05487326 cd05487, renin_like, Renin stimulates production o 3e-09
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 8e-09
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 1e-07
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 4e-06
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 3e-05
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  203 bits (518), Expect = 4e-62
 Identities = 103/362 (28%), Positives = 151/362 (41%), Gaps = 110/362 (30%)

Query: 87  YYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVR 146
           Y   + +G+PP+ F + +DTGSD+ W  C                               
Sbjct: 2   YLVTLSIGTPPQPFSLIVDTGSDLTWTQC------------------------------- 30

Query: 147 CSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNST 206
           CS                       Y + YGDGS TSG    +            ++ S 
Sbjct: 31  CS-----------------------YEYSYGDGSSTSGVLATETFTFGD------SSVSV 61

Query: 207 AQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKG--DSN 264
             + FGC T   G    S    DGI G G+  +S++SQL   G T   FS+CL    D+ 
Sbjct: 62  PNVAFGCGTDNEGG---SFGGADGILGLGRGPLSLVSQL---GSTGNKFSYCLVPHDDTG 115

Query: 265 GGGILVLGEIVE---PNIVYSPLVPS---QPHYNLNLQSISVNGQTLSIDPSAFSTSS-- 316
           G   L+LG+  +     +VY+PLV +     +Y +NL+ ISV G+ L I PS F+  S  
Sbjct: 116 GSSPLILGDAADLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDG 175

Query: 317 NKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGAS 376
           + GTI+D+GTTL YL + AY                            P ++ +F GGA 
Sbjct: 176 SGGTIIDSGTTLTYLPDPAY----------------------------PDLTLHFDGGAD 207

Query: 377 LILNAQEYLIQQNSVGGTAVWCIGIQKI--QGQTILGDLVLKDKIFVYDLAGQRIGWSNY 434
           L L  + Y +      G  V C+ I      G +ILG++  ++ +  YDL   R+G++  
Sbjct: 208 LELPPENYFVD----VGEGVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPA 263

Query: 435 DC 436
           DC
Sbjct: 264 DC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 493
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.89
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.88
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.9
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.94
PF1365090 Asp_protease_2: Aspartyl protease 95.58
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.04
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.97
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 92.77
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 91.83
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 91.82
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.33
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 88.68
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 88.44
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 87.52
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 85.97
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 83.33
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 81.14
cd0609489 RP_Saci_like RP_Saci_like, retropepsin family. Ret 80.32
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.9e-60  Score=491.96  Aligned_cols=386  Identities=27%  Similarity=0.454  Sum_probs=299.3

Q ss_pred             CCCCeEEEeeeecCC-----CC----cccHHHHHHHhHHhhhhhhhccCCceeeeccCCCccccceeEEEEEEeCCCCeE
Q 044471           29 GSFPVTLTLERAIPA-----SH----KVELSQLIARDRVRHGRLLQSAAGVVDFSVEGTYDPFVVGLYYTKVQLGSPPRE   99 (493)
Q Consensus        29 ~~~~~~l~l~r~~~~-----~~----~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~   99 (493)
                      .....+++|.|+-..     .+    ...+.+..+|+++|++++.++....  .++..... ..+++|+++|+||||||+
T Consensus        21 ~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~~~~~~~~-~~~~~Y~v~i~iGTPpq~   97 (431)
T PLN03146         21 PKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDASP--NDPQSDLI-SNGGEYLMNISIGTPPVP   97 (431)
T ss_pred             cCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccccC--CccccCcc-cCCccEEEEEEcCCCCce
Confidence            444678888775321     11    1234556677777776664332221  12222111 345799999999999999


Q ss_pred             EEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCCCCCCCCCCceeEEEcCCC
Q 044471          100 FHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDG  179 (493)
Q Consensus       100 ~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~G  179 (493)
                      +.|++||||+++||+|.+|..|..+.     .+.|||++|+||+.++|+++.|.....  ...|.. ++.|.|.+.|+||
T Consensus        98 ~~vi~DTGS~l~Wv~C~~C~~C~~~~-----~~~fdps~SST~~~~~C~s~~C~~~~~--~~~c~~-~~~c~y~i~Ygdg  169 (431)
T PLN03146         98 ILAIADTGSDLIWTQCKPCDDCYKQV-----SPLFDPKKSSTYKDVSCDSSQCQALGN--QASCSD-ENTCTYSYSYGDG  169 (431)
T ss_pred             EEEEECCCCCcceEcCCCCcccccCC-----CCcccCCCCCCCcccCCCCcccccCCC--CCCCCC-CCCCeeEEEeCCC
Confidence            99999999999999999999998653     379999999999999999999976432  234654 4569999999999


Q ss_pred             CeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCCcHHHHHHhCCCCCcceEEee
Q 044471          180 SGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCL  259 (493)
Q Consensus       180 s~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~qL~~~g~i~~~FS~~l  259 (493)
                      +.+.|.+++|+|+|++...+.   ..+.++.|||++.+.+.+.   ...+||||||+...|+++||..+  ++++||+||
T Consensus       170 s~~~G~l~~Dtltlg~~~~~~---~~v~~~~FGc~~~~~g~f~---~~~~GilGLG~~~~Sl~sql~~~--~~~~FSycL  241 (431)
T PLN03146        170 SFTKGNLAVETLTIGSTSGRP---VSFPGIVFGCGHNNGGTFD---EKGSGIVGLGGGPLSLISQLGSS--IGGKFSYCL  241 (431)
T ss_pred             CceeeEEEEEEEEeccCCCCc---ceeCCEEEeCCCCCCCCcc---CCCceeEecCCCCccHHHHhhHh--hCCcEEEEC
Confidence            988999999999998643221   2367899999998877542   24789999999999999999763  557999999


Q ss_pred             cCCC---CCcceEEeCCCCC---CCeEEecCCCC--CCeeeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceec
Q 044471          260 KGDS---NGGGILVLGEIVE---PNIVYSPLVPS--QPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYL  331 (493)
Q Consensus       260 ~~~~---~~~G~l~fGg~d~---~~~~~~pl~~~--~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~l  331 (493)
                      .+..   ...|.|+||+..+   +++.|+|++.+  ..+|.|+|++|+||++.+.++...+......++||||||++++|
T Consensus       242 ~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~L  321 (431)
T PLN03146        242 VPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTLL  321 (431)
T ss_pred             CCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCCccceec
Confidence            7522   3479999999642   35899999843  46899999999999999988776654334468999999999999


Q ss_pred             cHHHHHHHHHHHHhhcccCc----cccccCCCC---cCccceEEEEecCCcEEEecCcccEEEecccCCeeEEEEEEEec
Q 044471          332 TEAAYDPLINAITSSVSQSV----RPVLTKGNH---TAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKI  404 (493)
Q Consensus       332 p~~~~~~i~~~i~~~~~~~~----~~~~~~~~~---~~~~P~i~f~f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~  404 (493)
                      |+++|+++.+++.+++....    ......|..   ...+|+|+|+| +|+++.|+|++|+++..    .+..|+++...
T Consensus       322 p~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~F-~Ga~~~l~~~~~~~~~~----~~~~Cl~~~~~  396 (431)
T PLN03146        322 PSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTSDIKLPIITAHF-TGADVKLQPLNTFVKVS----EDLVCFAMIPT  396 (431)
T ss_pred             CHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCCCCCCCeEEEEE-CCCeeecCcceeEEEcC----CCcEEEEEecC
Confidence            99999999999988775321    112234543   24789999999 68999999999999753    24579999876


Q ss_pred             CCceeechhhhcceEEEEECCCCEEEEEeCCCCC
Q 044471          405 QGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSM  438 (493)
Q Consensus       405 ~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~  438 (493)
                      .+.+|||+.|||++|+|||++++|||||+.+|+.
T Consensus       397 ~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        397 SSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             CCceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            6779999999999999999999999999999974

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd06094 RP_Saci_like RP_Saci_like, retropepsin family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1htr_B329 Crystal And Molecular Structures Of Human Progastri 3e-12
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 3e-11
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 1e-10
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 2e-10
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 2e-10
5pep_A326 X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim 5e-10
3psg_A370 The High Resolution Crystal Structure Of Porcine Pe 8e-10
2bks_A340 Crystal Structure Of Renin-Pf00074777 Complex Lengt 9e-10
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 9e-10
1hrn_A337 High Resolution Crystal Structures Of Recombinant H 9e-10
1psa_A326 Structure Of A Pepsin(Slash)renin Inhibitor Complex 9e-10
2i4q_A336 Human ReninPF02342674 COMPLEX Length = 336 9e-10
2g24_A333 Ketopiperazine-Based Renin Inhibitors: Optimization 1e-09
3d91_A341 Human Renin In Complex With Remikiren Length = 341 1e-09
3pep_A326 Revised 2.3 Angstroms Structure Of Porcine Pepsin. 1e-09
2psg_A370 Refined Structure Of Porcine Pepsinogen At 1.8 Angs 2e-09
1f34_A326 Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou 2e-09
4pep_A326 The Molecular And Crystal Structures Of Monoclinic 2e-09
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 3e-09
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 9e-09
1flh_A326 Crystal Structure Of Human Uropepsin At 2.45 A Reso 2e-08
1pso_E326 The Crystal Structure Of Human Pepsin And Its Compl 3e-08
1eag_A342 Secreted Aspartic Proteinase (Sap2) From Candida Al 3e-08
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 4e-08
1zap_A342 Secreted Aspartic Protease From C. Albicans Length 4e-08
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 4e-08
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 2e-07
3vla_A413 Crystal Structure Of Edgp Length = 413 2e-07
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 5e-07
2rmp_A361 Rmp-Pepstatin A Complex Length = 361 1e-06
1smr_A335 The 3-D Structure Of Mouse Submaxillary Renin Compl 1e-06
2qzw_A341 Secreted Aspartic Proteinase (Sap) 1 From Candida A 2e-06
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 3e-06
2qzx_A342 Secreted Aspartic Proteinase (Sap) 5 From Candida A 9e-06
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 2e-05
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 2e-05
2h6s_A340 Secreted Aspartic Proteinase (sap) 3 From Candida A 5e-05
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 5e-05
1mpp_A361 X-Ray Analyses Of Aspartic Proteinases. V. Structur 7e-05
3qrv_A336 Crystal Structure Of Plasmepsin I (Pmi) From Plasmo 7e-05
1b5f_A239 Native Cardosin A From Cynara Cardunculus L. Length 7e-05
1j71_A334 Structure Of The Extracellular Aspartic Proteinase 9e-05
2zjk_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 2e-04
3ixk_A405 Potent Beta-Secretase 1 Inhibitor Length = 405 2e-04
2qk5_A395 Structure Of Bace1 Bound To Sch626485 Length = 395 2e-04
1fkn_A391 Structure Of Beta-Secretase Complexed With Inhibito 2e-04
4b1d_A388 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 2e-04
2hm1_A406 Crystal Structure Of Human Beta-Secretase (Bace) In 2e-04
3dm6_A406 Beta-Secretase 1 Complexed With Statine-Based Inhib 2e-04
2q11_A388 Structure Of Bace Complexed To Compound 1 Length = 2e-04
2zhr_A411 Crystal Structure Of Bace1 In Complex With Om99-2 A 2e-04
3kmx_A395 Structure Of Bace Bound To Sch346572 Length = 395 2e-04
2qzl_A411 Crystal Structure Of Human Beta Secretase Complexed 2e-04
1sgz_A389 Crystal Structure Of Unbound Beta-Secretase Catalyt 2e-04
4dpf_A391 Bace-1 In Complex With A Hea-Macrocyclic Type Inhib 2e-04
2zjn_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 2e-04
2fdp_A388 Crystal Structure Of Beta-Secretase Complexed With 2e-04
3udh_A404 Crystal Structure Of Bace With Compound 1 Length = 2e-04
3exo_A413 Crystal Structure Of Bace1 Bound To Inhibitor Lengt 2e-04
3tpr_A433 Crystal Structure Of Bace1 Complexed With An Inhibi 2e-04
3u6a_A390 Rational Design And Synthesis Of Aminopiperazinones 2e-04
1ym2_A402 Crystal Structure Of Human Beta Secretase Complexed 2e-04
2va5_A455 X-Ray Crystal Structure Of Beta Secretase Complexed 2e-04
2of0_A402 X-Ray Crystal Structure Of Beta Secretase Complexed 2e-04
3cib_A390 Structure Of Bace Bound To Sch727596 Length = 390 2e-04
2wjo_A412 Human Bace (Beta Secretase) In Complex With Cyclohe 2e-04
2q15_A385 Structure Of Bace Complexed To Compound 3a Length = 2e-04
2hiz_A455 Crystal Structure Of Human Beta-Secretase (Bace) In 2e-04
1tqf_A405 Crystal Structure Of Human Beta Secretase Complexed 2e-04
3l58_A414 Structure Of Bace Bound To Sch589432 Length = 414 2e-04
1ym4_A408 Crystal Structure Of Human Beta Secretase Complexed 2e-04
4ewo_A386 Design And Synthesis Of Potent Hydroxyethylamine (H 2e-04
3r1g_B402 Structure Basis Of Allosteric Inhibition Of Bace1 B 2e-04
3lpi_A455 Structure Of Bace Bound To Sch745132 Length = 455 2e-04
2zji_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 2e-04
3tpj_A433 Apo Structure Of Bace1 Length = 433 2e-04
3vv6_A416 Crystal Structure Of Beta Secetase In Complex With 2e-04
2vie_A392 Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2- 2e-04
3qi1_A408 Design And Synthesis Of Hydroxyethylamine (Hea) Bac 3e-04
3hvg_A411 Structure Of Bace (Beta Secretase) In Complex With 3e-04
2qu2_A415 Bace1 With Compound 1 Length = 415 3e-04
1w50_A411 Apo Structure Of Bace (beta Secretase) Length = 411 3e-04
3ckp_A412 Crystal Structure Of Bace-1 In Complex With Inhibit 3e-04
4b1c_A375 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 4e-04
3bra_A409 Bace-1 Complexed With Compound 1 Length = 409 4e-04
1czi_E323 Chymosin Complex With The Inhibitor Cp-113972 Lengt 5e-04
3cms_A323 Engineering Enzyme Sub-Site Specificity: Preparatio 5e-04
2zjh_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 6e-04
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 7e-04
2zjj_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 9e-04
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure 
Iteration: 1

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 151/371 (40%), Gaps = 63/371 (16%)
Query: 78  TYDP--FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFD 135
           TY+P  ++   Y+ ++ +G+PP+ F V  DTGS  LWV    C     TS  +     F+
Sbjct: 3   TYEPMAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSR-----FN 57
Query: 136 PSSSSTASLVRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDT 195
           PS SST S                       +N  +++ QYG GS T G++  D L + +
Sbjct: 58  PSESSTYS-----------------------TNGQTFSLQYGSGSLT-GFFGYDTLTVQS 93
Query: 196 ILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSS-QG----- 249
           I              FG S  + G      +  DGI G    ++SV    ++ QG     
Sbjct: 94  I--------QVPNQEFGLSENEPGTNFVYAQ-FDGIMGLAYPALSVDEATTAMQGMVQEG 144
Query: 250 -LTPRVFSHCLKGDS-NGGGILVLG----EIVEPNIVYSPLVPSQPHYNLNLQSISVNGQ 303
            LT  VFS  L     + GG +V G     +    I ++P V  + ++ + ++   + GQ
Sbjct: 145 ALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAP-VTQELYWQIGIEEFLIGGQ 203
Query: 304 TLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAI 363
                 ++   S     IVDTGT+L  + +     L+ A T +        L   N    
Sbjct: 204 ------ASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQA-TGAQEDEYGQFLVNCNSIQN 256
Query: 364 FPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQT--ILGDLVLKDKIFV 421
            P ++F    G    L    Y++  N      V    +    GQ   ILGD+ L+    V
Sbjct: 257 LPSLTF-IINGVEFPLPPSSYILSNNGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSV 315
Query: 422 YDLAGQRIGWS 432
           YDL   R+G++
Sbjct: 316 YDLGNNRVGFA 326
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 Back     alignment and structure
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 Back     alignment and structure
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 Back     alignment and structure
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 Back     alignment and structure
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 Back     alignment and structure
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 Back     alignment and structure
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 Back     alignment and structure
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution Length = 326 Back     alignment and structure
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 Back     alignment and structure
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 Back     alignment and structure
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex Length = 361 Back     alignment and structure
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed With A Decapeptide Inhibitor Ch-66 Based On The 4-16 Fragment Of Rat Angiotensinogen Length = 335 Back     alignment and structure
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans Length = 341 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans Length = 342 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans Length = 340 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And Refinement At 2.0 Angstroms Resolution Of The Aspartic Proteinase From Mucor Pusillus Length = 361 Back     alignment and structure
>pdb|3QRV|A Chain A, Crystal Structure Of Plasmepsin I (Pmi) From Plasmodium Falciparum Length = 336 Back     alignment and structure
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 Back     alignment and structure
>pdb|1J71|A Chain A, Structure Of The Extracellular Aspartic Proteinase From Candida Tropicalis Yeast Length = 334 Back     alignment and structure
>pdb|2ZJK|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid(3-Mercapto-Propyl)-Amide Length = 405 Back     alignment and structure
>pdb|3IXK|A Chain A, Potent Beta-Secretase 1 Inhibitor Length = 405 Back     alignment and structure
>pdb|2QK5|A Chain A, Structure Of Bace1 Bound To Sch626485 Length = 395 Back     alignment and structure
>pdb|1FKN|A Chain A, Structure Of Beta-Secretase Complexed With Inhibitor Length = 391 Back     alignment and structure
>pdb|4B1D|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 388 Back     alignment and structure
>pdb|2HM1|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor (2) Length = 406 Back     alignment and structure
>pdb|3DM6|A Chain A, Beta-Secretase 1 Complexed With Statine-Based Inhibitor Length = 406 Back     alignment and structure
>pdb|2Q11|A Chain A, Structure Of Bace Complexed To Compound 1 Length = 388 Back     alignment and structure
>pdb|2ZHR|A Chain A, Crystal Structure Of Bace1 In Complex With Om99-2 At Ph 5.0 Length = 411 Back     alignment and structure
>pdb|3KMX|A Chain A, Structure Of Bace Bound To Sch346572 Length = 395 Back     alignment and structure
>pdb|2QZL|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Ixs Length = 411 Back     alignment and structure
>pdb|1SGZ|A Chain A, Crystal Structure Of Unbound Beta-Secretase Catalytic Domain. Length = 389 Back     alignment and structure
>pdb|4DPF|A Chain A, Bace-1 In Complex With A Hea-Macrocyclic Type Inhibitor Length = 391 Back     alignment and structure
>pdb|2ZJN|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(5-Chloro-2-Isopropoxy-3-Methoxy-Benzyl)- Piperidin-4-Yl]-2-(2-Methyl-4-Sulfamoyl-Phenoxy)- Acetamide Length = 405 Back     alignment and structure
>pdb|2FDP|A Chain A, Crystal Structure Of Beta-Secretase Complexed With An Amino- Ethylene Inhibitor Length = 388 Back     alignment and structure
>pdb|3UDH|A Chain A, Crystal Structure Of Bace With Compound 1 Length = 404 Back     alignment and structure
>pdb|3EXO|A Chain A, Crystal Structure Of Bace1 Bound To Inhibitor Length = 413 Back     alignment and structure
>pdb|3TPR|A Chain A, Crystal Structure Of Bace1 Complexed With An Inhibitor Length = 433 Back     alignment and structure
>pdb|3U6A|A Chain A, Rational Design And Synthesis Of Aminopiperazinones As Beta Secretase (Bace) Inhibitors Length = 390 Back     alignment and structure
>pdb|1YM2|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Aur200 Length = 402 Back     alignment and structure
>pdb|2VA5|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 8c Length = 455 Back     alignment and structure
>pdb|2OF0|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 5 Length = 402 Back     alignment and structure
>pdb|3CIB|A Chain A, Structure Of Bace Bound To Sch727596 Length = 390 Back     alignment and structure
>pdb|2WJO|A Chain A, Human Bace (Beta Secretase) In Complex With Cyclohexanecarboxylic Acid (2-(2-Am Ino-6-Phenoxy-4h- Quinazolin-3-Yl)-2-Cyclohexyl-Ethyl)-Amide Length = 412 Back     alignment and structure
>pdb|2Q15|A Chain A, Structure Of Bace Complexed To Compound 3a Length = 385 Back     alignment and structure
>pdb|2HIZ|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor Length = 455 Back     alignment and structure
>pdb|1TQF|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Inhibitor Length = 405 Back     alignment and structure
>pdb|3L58|A Chain A, Structure Of Bace Bound To Sch589432 Length = 414 Back     alignment and structure
>pdb|1YM4|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Amk640 Length = 408 Back     alignment and structure
>pdb|4EWO|A Chain A, Design And Synthesis Of Potent Hydroxyethylamine (Hea) Bace-1 Inhibitors Length = 386 Back     alignment and structure
>pdb|3R1G|B Chain B, Structure Basis Of Allosteric Inhibition Of Bace1 By An Exosite- Binding Antibody Length = 402 Back     alignment and structure
>pdb|3LPI|A Chain A, Structure Of Bace Bound To Sch745132 Length = 455 Back     alignment and structure
>pdb|2ZJI|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(2, 6-Dimethoxy-Benzyl)-Piperidin-4-Yl]-4-Mercapto- Butyramide Length = 405 Back     alignment and structure
>pdb|3TPJ|A Chain A, Apo Structure Of Bace1 Length = 433 Back     alignment and structure
>pdb|3VV6|A Chain A, Crystal Structure Of Beta Secetase In Complex With 2-Amino-3-Methyl-6- ((1s, 2r)-2-Phenylcyclopropyl)pyrimidin-4(3h)-One Length = 416 Back     alignment and structure
>pdb|2VIE|A Chain A, Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2-Hydroxy- 3-((1,1, 5-Trimethylhexyl)amino)propyl)-3-(Ethylamino)-5-(2- Oxopyrrolidin-1-Yl)benzamide Length = 392 Back     alignment and structure
>pdb|3QI1|A Chain A, Design And Synthesis Of Hydroxyethylamine (Hea) Bace-1 Inhibitors: Prime Side Chromane-Containing Inhibitors Length = 408 Back     alignment and structure
>pdb|3HVG|A Chain A, Structure Of Bace (Beta Secretase) In Complex With Ev0 Length = 411 Back     alignment and structure
>pdb|2QU2|A Chain A, Bace1 With Compound 1 Length = 415 Back     alignment and structure
>pdb|1W50|A Chain A, Apo Structure Of Bace (beta Secretase) Length = 411 Back     alignment and structure
>pdb|3CKP|A Chain A, Crystal Structure Of Bace-1 In Complex With Inhibitor Length = 412 Back     alignment and structure
>pdb|4B1C|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 375 Back     alignment and structure
>pdb|3BRA|A Chain A, Bace-1 Complexed With Compound 1 Length = 409 Back     alignment and structure
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 Back     alignment and structure
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 Back     alignment and structure
>pdb|2ZJH|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-(1-Benzyl-Piperidin-4-Yl)-4-Mercapto-Butyramide Length = 405 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure
>pdb|2ZJJ|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid (2-Mercapto-Ethyl)- Amide Length = 405 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-75
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-68
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 5e-66
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-40
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 9e-40
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-38
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 4e-38
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 6e-38
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 7e-38
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 2e-37
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 2e-37
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 5e-36
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 8e-36
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 2e-35
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 4e-35
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 8e-35
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 5e-34
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 6e-34
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-33
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-33
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 1e-33
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-33
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-33
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-33
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-33
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 6e-33
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-32
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 2e-32
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-29
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 6e-27
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-26
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-25
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-04
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 1e-17
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 6e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  241 bits (617), Expect = 2e-75
 Identities = 64/380 (16%), Positives = 130/380 (34%), Gaps = 39/380 (10%)

Query: 85  GLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASL 144
           GL++  +Q  +P  +  V +D   + LWV+C              Q  F   +  S A+ 
Sbjct: 21  GLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSK-----TYQAPFCHSTQCSRANT 75

Query: 145 VRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTN 204
            +C     +       + C         +          G    D L +      +    
Sbjct: 76  HQCLSCPAASRPGCHKNTC------GLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLG 129

Query: 205 STAQI---MFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKG 261
               +   +F C+           R   G+ G G   +S+ +QL+S     R F+ CL  
Sbjct: 130 PLVTVPQFLFSCAPSFLVQ-KGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSR 188

Query: 262 DSNGGGILVLGE-----------IVEPNIVYSPLVPS-QPHYNLNLQSISVNGQTLSIDP 309
                G ++ G+            +  ++ ++PL  + Q  YN+ + SI +N  ++    
Sbjct: 189 YPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLN 248

Query: 310 SAFSTSS---NKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRP---------VLTK 357
              ST     + GT++ T T    L ++ Y          + +  +            + 
Sbjct: 249 KISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSN 308

Query: 358 GNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKD 417
             +      +  +   G    ++ ++ ++Q            G  + + +  LG   L++
Sbjct: 309 KINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEE 368

Query: 418 KIFVYDLAGQRIGWSNYDCS 437
            + V+DLA  R+G+S     
Sbjct: 369 NLVVFDLARSRVGFSTSSLH 388
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.88
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.67
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.01
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 92.5
2hs1_A99 HIV-1 protease; ultra-high resolution active site 80.8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=3.1e-60  Score=483.56  Aligned_cols=308  Identities=26%  Similarity=0.460  Sum_probs=259.3

Q ss_pred             eeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC----CCCCCCCCcccCCcCCCCCCCccceec
Q 044471           71 VDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN----GCPGTSGLQIQLNFFDPSSSSTASLVR  146 (493)
Q Consensus        71 ~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~----~C~~~~~~~~~~~~y~p~~SsT~~~v~  146 (493)
                      ...|+.+    +.+.+|+++|+||||||+|+|++||||+++||+|..|.    .|..+       +.|||++|+||+.  
T Consensus        51 ~~~~l~n----~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~-------~~y~~~~SsT~~~--  117 (383)
T 2x0b_A           51 SSVILTN----YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYKH--  117 (383)
T ss_dssp             CEEEEEE----ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS-------CCBCGGGCTTCEE--
T ss_pred             ceEeeee----cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC-------CCCCCCCCCcEEE--
Confidence            3456654    45689999999999999999999999999999999996    58776       8999999999983  


Q ss_pred             cCCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCC
Q 044471          147 CSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDR  226 (493)
Q Consensus       147 C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~  226 (493)
                                           ++|.|.++|++|+ ++|++++|+|++++..        +. +.|||++.+.+.. +...
T Consensus       118 ---------------------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~-f~~~  165 (383)
T 2x0b_A          118 ---------------------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALP-FMLA  165 (383)
T ss_dssp             ---------------------EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHH-HTTC
T ss_pred             ---------------------CCcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCcc-cccC
Confidence                                 4589999999998 6999999999998643        55 8999999876532 1245


Q ss_pred             CcceEEeeCCCCCc------HHHHHHhCCCCC-cceEEeecCCCCC----cceEEeCCCCC----CCeEEecCCCCCCee
Q 044471          227 AVDGIFGFGQQSMS------VISQLSSQGLTP-RVFSHCLKGDSNG----GGILVLGEIVE----PNIVYSPLVPSQPHY  291 (493)
Q Consensus       227 ~~~GIlGLg~~~~s------~~~qL~~~g~i~-~~FS~~l~~~~~~----~G~l~fGg~d~----~~~~~~pl~~~~~~y  291 (493)
                      .+|||||||++..+      ++++|++||+|+ ++||+||++....    +|.|+|||+|+    +++.|+|+. ...+|
T Consensus       166 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w  244 (383)
T 2x0b_A          166 EFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVW  244 (383)
T ss_dssp             SSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSC
T ss_pred             CCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceE
Confidence            67999999998654      789999999996 8999999886433    79999999994    689999998 57899


Q ss_pred             eEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEe
Q 044471          292 NLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNF  371 (493)
Q Consensus       292 ~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f  371 (493)
                      +|.|++|.|+++.+.       ...+..+|+||||+++++|++++++|.+++++..  ....+.++|+....+|+|+|+|
T Consensus       245 ~v~l~~i~v~~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--~~g~~~v~C~~~~~~P~i~f~~  315 (383)
T 2x0b_A          245 QIQMKGVSVGSSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK--RLFDYVVKCNEGPTLPDISFHL  315 (383)
T ss_dssp             EEEECEEEESSCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE--CSSCEEEEGGGTTTCCCEEEEE
T ss_pred             EEEEeEEEeCCceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc--cCCcEEEeccccccCceEEEEE
Confidence            999999999987642       2345689999999999999999999999998766  3344667888777899999999


Q ss_pred             cCCcEEEecCcccEEEecccCCeeEEEEEEEecC------CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471          372 AGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ------GQTILGDLVLKDKIFVYDLAGQRIGWSNYD  435 (493)
Q Consensus       372 ~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~------~~~ILG~~fl~~~yvvfD~~~~~igfA~~~  435 (493)
                       +|.+++|+|++|+++... .+...|.++|+..+      +.||||++|||++|+|||++++|||||+++
T Consensus       316 -~g~~~~l~~~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~  383 (383)
T 2x0b_A          316 -GGKEYTLTSADYVFQESY-SSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR  383 (383)
T ss_dssp             -TTEEEEECHHHHBCCCCC-CTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             -CCEEEEECHHHhEeeccC-CCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence             889999999999987532 12334555787642      689999999999999999999999999863
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 493
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-45
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 4e-43
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-40
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 4e-38
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 8e-37
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-36
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 4e-36
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 8e-36
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-35
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-34
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 8e-33
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 3e-32
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 3e-32
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-31
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 3e-31
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 4e-31
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 6e-31
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-30
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 3e-30
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 7e-30
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 3e-29
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 9e-25
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  161 bits (408), Expect = 1e-45
 Identities = 58/393 (14%), Positives = 122/393 (31%), Gaps = 67/393 (17%)

Query: 85  GLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASL 144
            LY      G+      + +D    ++W +C            +I  +      ++    
Sbjct: 14  SLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPA-----EIPCSSPTCLLANAYPA 63

Query: 145 VRCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTN 204
             C    C             +    +Y +    G+  +G         +T       + 
Sbjct: 64  PGCPAPSCGS--------DKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSK 115

Query: 205 STAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSN 264
               ++  C+  +        R   G+ G     +++ +Q++S       F  CL     
Sbjct: 116 VNVGVLAACAPSKLLAS--LPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGP 173

Query: 265 GGGILVLGEI----VEPNIVYSPLV--PSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNK 318
           G  I   G +       ++ Y+PLV     P + ++ +SI V    + +   A +T    
Sbjct: 174 GVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATG--- 230

Query: 319 GTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVR---------------------PVLTK 357
           G ++ T      L    Y PL++A T +++                           L  
Sbjct: 231 GVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN 290

Query: 358 GNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQG---------QT 408
                  P +     GG+   +  +  ++           C+   +++G           
Sbjct: 291 NLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ----GTACVAFVEMKGVAAGDGRAPAV 346

Query: 409 ILGDLVLKDKIFVYDLAGQRIGWS----NYDCS 437
           ILG   ++D +  +D+  +R+G+S       C 
Sbjct: 347 ILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCG 379
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.4e-56  Score=454.41  Aligned_cols=300  Identities=27%  Similarity=0.482  Sum_probs=253.0

Q ss_pred             ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCC
Q 044471           82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADS  161 (493)
Q Consensus        82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~  161 (493)
                      +.+.+|+++|+||||||+|+|++||||+++||+|..|..|..+.     .+.|||++|+|++.                 
T Consensus        53 ~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~-----~~~yd~~~Sst~~~-----------------  110 (370)
T d3psga_          53 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSD-----HNQFNPDDSSTFEA-----------------  110 (370)
T ss_dssp             GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-----SCCBCGGGCTTCEE-----------------
T ss_pred             ccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCccccc-----ccccCCCccccccc-----------------
Confidence            55689999999999999999999999999999999999876442     38999999999984                 


Q ss_pred             CCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC--
Q 044471          162 GCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM--  239 (493)
Q Consensus       162 ~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~--  239 (493)
                            ..|.|.+.|++|+ +.|.++.|++.+++..        +.++.|||+....+.+. .....+||+|||++..  
T Consensus       111 ------~~~~~~~~Yg~Gs-~~G~~~~d~~~~~~~~--------~~~~~f~~~~~~~~~~~-~~~~~~Gi~gl~~~~~~~  174 (370)
T d3psga_         111 ------TSQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFL-YYAPFDGILGLAYPSISA  174 (370)
T ss_dssp             ------EEEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG-GGCSCSEEEECSCGGGCG
T ss_pred             ------CCCcEEEEeCCce-EEEEEEEEEEeeecee--------eeeeEEEEEeeccCcee-cccccccccccccCcccc
Confidence                  4578999999998 5999999999998654        56789999998766543 2356799999998654  


Q ss_pred             ----cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEEeecCCC
Q 044471          240 ----SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPS  310 (493)
Q Consensus       240 ----s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~~~  310 (493)
                          .++.+|.++++|+ ++||+|+.+....+|.|+||++|    +++++|+|+. +..+|.|.++++.++++.+..   
T Consensus       175 ~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~-~~~~w~v~~~~i~v~g~~~~~---  250 (370)
T d3psga_         175 SGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC---  250 (370)
T ss_dssp             GGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC---
T ss_pred             cCCCchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeec-ccceEEEEEeeEEeCCeEEec---
Confidence                4899999999997 79999999877778999999998    4789999986 678999999999999987753   


Q ss_pred             cccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEEecc
Q 044471          311 AFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNS  390 (493)
Q Consensus       311 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~~~  390 (493)
                          ..+..++|||||++++||++++++|.+++.+..... ..+.+.|...+.+|+|+|+| ||.+++|+|++|+++.. 
T Consensus       251 ----~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~~~-~~~~~~C~~~~~~P~l~f~f-~g~~~~l~~~~yi~~~~-  323 (370)
T d3psga_         251 ----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSD-GEMVISCSSIDSLPDIVFTI-DGVQYPLSPSAYILQDD-  323 (370)
T ss_dssp             ----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTT-CCEECCGGGGGGCCCEEEEE-TTEEEEECHHHHEEECS-
T ss_pred             ----CCCccEEEecCCceEeCCHHHHHHHHHHhCCeeecC-CcEEEeccccCCCceEEEEE-CCEEEEEChHHeEEEcC-
Confidence                245679999999999999999999999998876543 44667787778899999999 89999999999999742 


Q ss_pred             cCCeeEEEEEEEecC------CceeechhhhcceEEEEECCCCEEEEEeC
Q 044471          391 VGGTAVWCIGIQKIQ------GQTILGDLVLKDKIFVYDLAGQRIGWSNY  434 (493)
Q Consensus       391 ~~~~~~~cl~i~~~~------~~~ILG~~fl~~~yvvfD~~~~~igfA~~  434 (493)
                          +.|++++...+      +.||||++|||++|+|||++++||||||+
T Consensus       324 ----~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~  369 (370)
T d3psga_         324 ----DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV  369 (370)
T ss_dssp             ----SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             ----CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEec
Confidence                34666665432      57999999999999999999999999986
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure