Citrus Sinensis ID: 044498

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MGTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPVQLGSPCAEDDKE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEEccccccHHHHHHHHHHHcccEEEEEccccccccccccHHHccccccccccEEEEEEEccHHHHHccccccHHEEccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccEEEcccccccccccHHHHHHHHHHHHHccccccEEccccccccHHHHHHHHHHHHcccccEEccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHccccEEEEEcHHHHHccccHHHHHHHcccccEEEEEEEcccHHHHHHHHHcccEEEEEHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEccccccccccHHHHHHccccccEEcccccHHHHHEHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccEcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEccccccEccccccccccc
Coil and Loop (DISEMBL)
mgtsygectydklereshwpsgklrissigvggfipsnIARRLKSERhystsipnALYIIASdwnknehmmedmfchefHLVDLRVMDnclrmtsgvdnmSNLAadmggmgfiqsNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVssaciypefkqldtdvkeseawpaepqdayglEKLATEGLCKHYTKDFEIEcrlvgekapaafsrkavtstdnfemwgdgkqtrsLTFIDECVEGVLRLIKsdfreplnigsdemVSINEMAEIILSFeneklpihpipgpegvrgrnsddtlineelgwaptmkqkdeLRITYFWIKEQVEKEKAqgidlsiygssnvvatqapvqlgspcaeddke
Flexible Loop (DISEMBL)
mgtsygectydklereshwpsgklrissigvggfIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEkapaafsrkavtstdnfemwgdgkqtrslTFIDECVEGVLRLiksdfreplnigsdEMVSINEMAEIILSFENEKLPIhpipgpegvrgrnSDDTLINEelgwaptmkqkdELRITYFWIKEQVEKEKAQGIDLSIYgssnvvatqapvqlgspcaeddke
Low Complexity Region (SEG)
MGTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPVQLGSPCAEDDKE
Disordered region (IsUnstruct)
*****************HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKE*EAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH****************LINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVA*****************
Disordered Region (DISOPRED)
*****************HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK****************************************
Disordered Region (DISEMBL)
MGTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPVQL**********
Disordered Region (DISPRO)
***SYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPV************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPVQLGSPCAEDDKE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	366	2.2.26 [Sep-21-2011]
A3C4S4	378	GDP-mannose 3,5-epimerase	yes	no	0.964	0.933	0.754	1e-163
A2Z7B3	378	GDP-mannose 3,5-epimerase	N/A	no	0.964	0.933	0.751	1e-162
Q2R1V8	371	GDP-mannose 3,5-epimerase	no	no	0.950	0.938	0.756	1e-161
Q93VR3	377	GDP-mannose 3,5-epimerase	yes	no	0.967	0.938	0.712	1e-156
Q67WR5	347	Putative GDP-L-fucose syn	no	no	0.609	0.642	0.237	5e-11
Q9LMU0	328	Putative GDP-L-fucose syn	no	no	0.612	0.682	0.254	5e-11
O34886	316	Uncharacterized UDP-gluco	yes	no	0.505	0.585	0.279	4e-10
Q6GMI9	418	UDP-glucuronic acid decar	yes	no	0.797	0.698	0.224	2e-09
Q67WR2	328	Probable GDP-L-fucose syn	no	no	0.617	0.689	0.240	2e-09
P55353	314	Uncharacterized protein y	no	no	0.554	0.646	0.260	4e-09

>sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1

 Score =  574 bits (1479), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 289/383 (75%), Positives = 315/383 (82%), Gaps = 30/383 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YGE TY +LERE +WPS KLRIS  G GGFI S+IARRLKSE HY         IIA
Sbjct: 8   GTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHY---------IIA 58

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIM 118

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYG
Sbjct: 119 YNNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 176

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFE 223
           LEKLATE LCKHYTKDF IECR VG                EKAPAAF RKA TSTD FE
Sbjct: 177 LEKLATEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 235

Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEIILSFE+ +LPI
Sbjct: 236 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPI 295

Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEK QG+D++ YG
Sbjct: 296 HHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYG 355

Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV+TQAPVQLGS  A D KE
Sbjct: 356 SSKVVSTQAPVQLGSLRAADGKE 378

Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 8

>sp|A2Z7B3|GME1_ORYSI GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1

 Score =  572 bits (1473), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 288/383 (75%), Positives = 314/383 (81%), Gaps = 30/383 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YGE TY +LERE +WPS KLRIS  G GGFI S+IARRLKSE HY         IIA
Sbjct: 8   GTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHY---------IIA 58

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+ VD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIM 118

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYG
Sbjct: 119 YNNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 176

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFE 223
           LEKLATE LCKHYTKDF IECR VG                EKAPAAF RKA TSTD FE
Sbjct: 177 LEKLATEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 235

Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEIILSFE+ +LPI
Sbjct: 236 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPI 295

Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEK QG+D++ YG
Sbjct: 296 HHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYG 355

Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV+TQAPVQLGS  A D KE
Sbjct: 356 SSKVVSTQAPVQLGSLRAADGKE 378

Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose.

Oryza sativa subsp. indica (taxid: 39946)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q2R1V8|GME2_ORYSJ GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2

 Score =  566 bits (1459), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 286/378 (75%), Positives = 311/378 (82%), Gaps = 30/378 (7%)

Query: 7   ECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK 66
           E TY +LE+E +WP  KLRIS  G GGFI S+IARRLKSE HY         IIASDW K
Sbjct: 6   EYTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHY---------IIASDWKK 56

Query: 67  NEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTT 126
           NEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIMY NT 
Sbjct: 57  NEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 116

Query: 127 ISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYGLEKLA 184
           ISF+MLEAAR+NGV    FF+ SSACIYPEFKQLDT V  KES+AWPAEPQDAYGLEKLA
Sbjct: 117 ISFNMLEAARINGVKR--FFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLA 174

Query: 185 TEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFEMWGDG 228
           TE LCKHYTKDF IECR VG                EKAPAAF RKA+TSTD FEMWGDG
Sbjct: 175 TEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDG 233

Query: 229 KQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG 288
            QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN++LPIH IPG
Sbjct: 234 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG 293

Query: 289 PEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVV 348
           PEGVRGRNSD+TLI E+LGWAPTM+ KD LRITYFWIKEQ+EKEKA+G+DLS YGSS VV
Sbjct: 294 PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGSSKVV 353

Query: 349 ATQAPVQLGSPCAEDDKE 366
            TQAPVQLGS  A D KE
Sbjct: 354 QTQAPVQLGSLRAADGKE 371

Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q93VR3|GME_ARATH GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1

 Score =  550 bits (1417), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 273/383 (71%), Positives = 305/383 (79%), Gaps = 29/383 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT YG  TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IA
Sbjct: 6   GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 56

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 57  SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 116

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT---DVKESEAWPAEPQDAY 178
           Y NT ISF+M+EAAR+NG+    FF+ SSACIYPEFKQL+T    +KES+AWPAEPQDAY
Sbjct: 117 YNNTMISFNMIEAARINGIKR--FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAY 174

Query: 179 GLEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFE 223
           GLEKLATE LCKHY KDF IECR+                 EKAPAAF RKA TSTD FE
Sbjct: 175 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 234

Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPI
Sbjct: 235 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 294

Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YG
Sbjct: 295 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYG 354

Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV TQAPVQLGS  A D KE
Sbjct: 355 SSKVVGTQAPVQLGSLRAADGKE 377

Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q67WR5|FCL2_ORYSJ Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica GN=Os06g0652300 PE=3 SV=1

 Score = 69.3 bits (168), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 25/248 (10%)

Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP-EFKQLDT 162
           AA +GG+    +  +  + +N  I+ ++++AAR  G +      ++S+ IYP +  Q   
Sbjct: 94  AAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVR-KLLVLASSTIYPADAPQPTP 152

Query: 163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC------RLVGEKAP-------- 208
           +       PAE  + Y + K+A   +C+    ++ ++        L G + P        
Sbjct: 153 ESALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHV 212

Query: 209 -----AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI-KSDFREPLNIGSDE 262
                  F R  +       +WG G   R  T +D+  E V+ L+ +    E +N+GS E
Sbjct: 213 IPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGE 272

Query: 263 MVSINEMAEIILSFEN-EKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRIT 321
            V++ E+AE +      E +       PEGV  R  D   +  +LGW P +  +D ++  
Sbjct: 273 EVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMR-KLGWEPRVALRDGIQDL 331

Query: 322 Y-FWIKEQ 328
           Y F+++ +
Sbjct: 332 YRFYLRHE 339

Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: 1

>sp|Q9LMU0|FCL2_ARATH Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 31/255 (12%)

Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD 163
           AA +GG+    +  +  +  N  I  +++ +A  +GV  L   F+ S+CIYP+F      
Sbjct: 79  AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKL--LFLGSSCIYPKFAPQPIP 136

Query: 164 VKESEAWPAEPQDA-YGLEKLATEGLCKHYTKDFE------IECRLVGEK---------- 206
                  P EP +  Y + K+A   +C+ Y    +      +   L G+           
Sbjct: 137 ESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHV 196

Query: 207 APAA---FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK--SDFREPLNIGSD 261
            PA    F      + D   +WG G   R    +D+  +  + L+   S F E +N+GS 
Sbjct: 197 LPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGF-EHVNVGSG 255

Query: 262 EMVSINEMAEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDEL 318
             V+I E+AE++   + F+ +   +     P+G   +  D + +   LGW P +  KD L
Sbjct: 256 VEVTIKELAELVKEVVGFKGKL--VWDTTKPDGTPRKLMDSSKL-ASLGWTPKISLKDGL 312

Query: 319 RITYFWIKEQVEKEK 333
             TY W  E V ++K
Sbjct: 313 SQTYEWYLENVVQKK 327

Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: 1

>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis (strain 168) GN=ytcB PE=3 SV=1

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)

Query: 93  MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC 152
           +  GVD + +LAA  G      ++       N      +LEA R + +   TF F S++ 
Sbjct: 71  LLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQ--TFVFASTSS 128

Query: 153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG-------- 204
           +Y E KQ     K SE     P   YG+ KL  E LC  Y + F I   ++         
Sbjct: 129 VYGE-KQ----GKVSENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPR 183

Query: 205 EKAPAAFSR--KAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGS 260
           ++   AF R  K         ++GDG+Q+R  T+I +CV+G+  ++       E +NIG 
Sbjct: 184 QRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGG 243

Query: 261 DEMVSINEMAEIILSFENEKLPIH 284
            E  S+ ++  +I      K  +H
Sbjct: 244 AERASVLKVVSLIEDISGRKATLH 267

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 4

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 136/325 (41%), Gaps = 33/325 (10%)

Query: 25  RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
           RI   G  GF+ S++  +L  + H  T + N        +   +  +E    HE F L++
Sbjct: 88  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNF-------FTGRKRNVEHWIGHENFELIN 140

Query: 84  LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
             V++    +   VD + +LA+      ++  N    +  NT  + +ML  A+  G    
Sbjct: 141 HDVVEP---LYIEVDQIYHLASPASPPNYM-YNPIKTLKTNTIGTLNMLGLAKRVGA--- 193

Query: 144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
                S++ +Y  PE    + D       P  P+  Y   K   E +C  Y K   +E R
Sbjct: 194 RLLLASTSEVYGDPEVHPQNEDY-WGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 252

Query: 202 LV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
           +                +  + F  +A+   +   ++G G QTR+  ++ + V G++ L+
Sbjct: 253 VARIFNTFGSRMHMNDGRVVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVSLM 311

Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
            S+   P+N+G+ E  +I E A++I S    +  I  +P   +  + R  D       LG
Sbjct: 312 NSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLG 371

Query: 308 WAPTMKQKDELRITYFWIKEQVEKE 332
           W P +  ++ L  T  +   ++E +
Sbjct: 372 WEPVVPLEEGLNKTIQYFSRELEHQ 396

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q67WR2|FCL1_ORYSJ Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 28/254 (11%)

Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD 163
           AA +GG+    +  +  +  N  I  ++++AA   G +     F+ S+CIYP+F      
Sbjct: 78  AAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVR-KLLFLGSSCIYPKFAPQPIP 136

Query: 164 VKESEAWPAEPQDA-YGLEKLATEGLCKHY-------------------TKDFEIECRLV 203
                + P EP +  Y + K+A   +C+ Y                     +F  E   V
Sbjct: 137 ENSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHV 196

Query: 204 GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS-DFREPLNIGSDE 262
                  F     ++     +WG G   R    +D+  + V+ L+      E +N+GS  
Sbjct: 197 LPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGS 256

Query: 263 MVSINEMAEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELR 319
            V+I E+AE++   + F+ +   +     P+G   +  D + I +E+GW P +  K+ L 
Sbjct: 257 EVTIKELAELVKEVVGFQGKL--VWDSSKPDGTPRKLMDSSKI-QEMGWKPKVPLKEGLV 313

Query: 320 ITYFWIKEQVEKEK 333
            TY W  E V   K
Sbjct: 314 ETYKWYVENVISAK 327

Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: 1

>sp|P55353|Y4AF_RHISN Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1

 Score = 62.8 bits (151), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 27/230 (11%)

Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD 163
           AA +GG+    +  +  +Y+N  +  +++E +  +GV  L   F+ S+CIYP++      
Sbjct: 67  AAKVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKL--LFLGSSCIYPKYAAQPIR 124

Query: 164 VKESEAWPAEPQDA-YGLEKLATEGLCKHYTKDF------EIECRLVGEK---------A 207
            +     P EP +  Y + K+A   LC+ Y K +       +   L G +          
Sbjct: 125 EEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHV 184

Query: 208 PAAFSRKA----VTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS-DFREPLNIGSDE 262
             A  RKA    +       +WG G  TR   + ++C + ++ L+K     E +NIGS  
Sbjct: 185 VPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGG 244

Query: 263 MVSINEMAEIILSFENEKLPI-HPIPGPEGV-RGRNSDDTLINEELGWAP 310
            +SI E+A I+      K  I      P+G  R   S + L++  +GW P
Sbjct: 245 EISIIELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVS--MGWRP 292

Putative nucleotide sugar epimerase/dehydrogenase.

Rhizobium sp. (strain NGR234) (taxid: 394)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
255580957	376	dtdp-glucose 4-6-dehydratase, putative [	0.967	0.941	0.756	1e-163
147794688	376	hypothetical protein VITISV_003948 [Viti	0.967	0.941	0.748	1e-162
284437921	376	GDP-D-mannose 3',5'-epimerase [Actinidia	0.964	0.938	0.753	1e-162
225451338	376	PREDICTED: GDP-mannose 3,5-epimerase 1 [	0.967	0.941	0.751	1e-162
225432858	376	PREDICTED: GDP-mannose 3,5-epimerase 1 i	0.967	0.941	0.748	1e-162
339899489	376	GDP-D-mannose 3',5'-epimerase [Actinidia	0.964	0.938	0.750	1e-161
115482032	378	Os10g0417600 [Oryza sativa Japonica Grou	0.964	0.933	0.754	1e-161
242039695	380	hypothetical protein SORBIDRAFT_01g02189	0.961	0.926	0.753	1e-161
146432257	376	GDP-mannose-3',5'-epimerase [Vitis vinif	0.967	0.941	0.748	1e-161
224035479	380	unknown [Zea mays]	0.961	0.926	0.748	1e-160

>gi|255580957|ref|XP_002531297.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gi|223529130|gb|EEF31110.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 289/382 (75%), Positives = 315/382 (82%), Gaps = 28/382 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YG  TY+ LERE +WPS KLRIS  G GGFI S+IARRLKSE HY         IIA
Sbjct: 6   GTNYGAYTYENLEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHY---------IIA 56

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 57  SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIM 116

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEA+R+NGV  L  F+ SSACIYPEFKQLDT+V  KES+AWPAEPQDAYG
Sbjct: 117 YNNTMISFNMLEASRINGVKRL--FYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYG 174

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEM 224
           LEKLATE LCKHYTKDF IECR+                 EKAPAAF RKA+TSTD FEM
Sbjct: 175 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEM 234

Query: 225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH 284
           WGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFE+ KLPIH
Sbjct: 235 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDRKLPIH 294

Query: 285 PIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGS 344
            IPGPEGVRGRNSD+TLI E+LGWAPTM+ KD LRITYFWIKEQ+EKEK+QG+DLSIYGS
Sbjct: 295 HIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKSQGVDLSIYGS 354

Query: 345 SNVVATQAPVQLGSPCAEDDKE 366
           S VV TQAPVQLGS  A D KE
Sbjct: 355 SKVVGTQAPVQLGSLRAADGKE 376

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147794688|emb|CAN69149.1| hypothetical protein VITISV_003948 [Vitis vinifera]

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/382 (74%), Positives = 314/382 (82%), Gaps = 28/382 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YGE TY+ L RE +WPS KLRIS  G GGFI S+IARRLK+E HY         IIA
Sbjct: 6   GTTYGEYTYENLXREPYWPSEKLRISITGAGGFIASHIARRLKTEGHY---------IIA 56

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 57  SDWKKNEHMPEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIM 116

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEA+R+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYG
Sbjct: 117 YNNTMISFNMLEASRINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 174

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEM 224
           LEKLATE LCKHYTKDF IECR+                 EKAPAAF RKA+TSTD FEM
Sbjct: 175 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEM 234

Query: 225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH 284
           WGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN+ LPIH
Sbjct: 235 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIH 294

Query: 285 PIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGS 344
            IPGPEGVRGRNSD+ LI E+LGWAPTM+ KD LRITYFWIKEQ+EKEK QGIDLS+YGS
Sbjct: 295 HIPGPEGVRGRNSDNNLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKVQGIDLSVYGS 354

Query: 345 SNVVATQAPVQLGSPCAEDDKE 366
           S VV TQAPVQLGS  A D KE
Sbjct: 355 SKVVGTQAPVQLGSLRAADGKE 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|284437921|gb|ADB85573.1| GDP-D-mannose 3',5'-epimerase [Actinidia deliciosa]

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/381 (75%), Positives = 311/381 (81%), Gaps = 28/381 (7%)

Query: 3   TSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS 62
           ++YG  TY+ LERE +WP  KLRIS  G GGFI S+IARRLK E HY         IIAS
Sbjct: 7   SNYGSYTYENLEREPYWPEAKLRISITGAGGFIASHIARRLKGEGHY---------IIAS 57

Query: 63  DWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMY 122
           DW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIMY
Sbjct: 58  DWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMY 117

Query: 123 KNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYGL 180
            NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQLDT+V  KES+AWPAEPQDAYGL
Sbjct: 118 NNTMISFNMLEAARVNGVKR--FFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGL 175

Query: 181 EKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEMW 225
           EKLATE LCKHYTKDF IECR+                 EKAPAAF RK +TSTD FEMW
Sbjct: 176 EKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKTLTSTDRFEMW 235

Query: 226 GDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP 285
           GDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN+KLPIH 
Sbjct: 236 GDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKKLPIHH 295

Query: 286 IPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSS 345
           IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEKAQGIDLS YGSS
Sbjct: 296 IPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQLEKEKAQGIDLSTYGSS 355

Query: 346 NVVATQAPVQLGSPCAEDDKE 366
            VV TQAPVQLGS  A D KE
Sbjct: 356 KVVGTQAPVQLGSLRAADGKE 376

Source: Actinidia deliciosa

Species: Actinidia deliciosa

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451338|ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Vitis vinifera]

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/382 (75%), Positives = 315/382 (82%), Gaps = 28/382 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YG  TY++LERE +W S KLRIS  G GGFI S+IARRLK+E HY         IIA
Sbjct: 6   GTTYGAYTYEELEREPYWQSEKLRISITGAGGFIASHIARRLKTEGHY---------IIA 56

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 57  SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIM 116

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEA+R+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYG
Sbjct: 117 YNNTMISFNMLEASRINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 174

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEM 224
           LEKLATE LCKHYTKDF IECR+                 EKAPAAF RKA+TSTD FEM
Sbjct: 175 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEM 234

Query: 225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH 284
           WGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN+ LPIH
Sbjct: 235 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIH 294

Query: 285 PIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGS 344
            IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LRITYFWIKEQ+EKEK +GIDLSIYGS
Sbjct: 295 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKEQIEKEKVKGIDLSIYGS 354

Query: 345 SNVVATQAPVQLGSPCAEDDKE 366
           S VV TQAPVQLGS  A D KE
Sbjct: 355 SKVVGTQAPVQLGSLRAADGKE 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432858|ref|XP_002283898.1| PREDICTED: GDP-mannose 3,5-epimerase 1 isoform 1 [Vitis vinifera] gi|359477586|ref|XP_003631999.1| PREDICTED: GDP-mannose 3,5-epimerase 1 isoform 2 [Vitis vinifera]

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/382 (74%), Positives = 314/382 (82%), Gaps = 28/382 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YGE TY+ LERE +WPS KLRIS  G GGFI S+IARRLK+E HY         IIA
Sbjct: 6   GTTYGEYTYENLEREPYWPSEKLRISITGAGGFIASHIARRLKTEGHY---------IIA 56

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GV ++ NLAADMGGMGFIQSNHSVIM
Sbjct: 57  SDWKKNEHMPEDMFCHEFHLVDLRVMDNCLKVTTGVGHVFNLAADMGGMGFIQSNHSVIM 116

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEA+R+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYG
Sbjct: 117 YNNTMISFNMLEASRINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 174

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEM 224
           LEKLATE LCKHYTKDF IECR+                 EKAPAAF RKA+TSTD FEM
Sbjct: 175 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEM 234

Query: 225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH 284
           WGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN+ LPIH
Sbjct: 235 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIH 294

Query: 285 PIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGS 344
            IPGPEGVRGRNSD+ LI E+LGWAPTM+ KD LRITYFWIKEQ+EKEK QGIDLS+YGS
Sbjct: 295 HIPGPEGVRGRNSDNNLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKVQGIDLSVYGS 354

Query: 345 SNVVATQAPVQLGSPCAEDDKE 366
           S VV TQAPVQLGS  A D KE
Sbjct: 355 SKVVGTQAPVQLGSLRAADGKE 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|339899489|gb|AEK22069.1| GDP-D-mannose 3',5'-epimerase [Actinidia rufa]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 286/381 (75%), Positives = 311/381 (81%), Gaps = 28/381 (7%)

Query: 3   TSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS 62
           ++YG  TY+ LERE +WP  KLRIS  G GGFI S+IARRLK E HY         IIAS
Sbjct: 7   SNYGSYTYENLEREPYWPEAKLRISITGAGGFIASHIARRLKGEGHY---------IIAS 57

Query: 63  DWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMY 122
           DW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIMY
Sbjct: 58  DWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMY 117

Query: 123 KNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYGL 180
            NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQLDT+V  KES+AWPAEPQDAYGL
Sbjct: 118 NNTMISFNMLEAARVNGVKR--FFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGL 175

Query: 181 EKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEMW 225
           EKLATE LCKHYTKDF IECR+                 EKAPAAF RK +TSTD FEMW
Sbjct: 176 EKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKTLTSTDRFEMW 235

Query: 226 GDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP 285
           GDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN+KLPIH 
Sbjct: 236 GDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKKLPIHH 295

Query: 286 IPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSS 345
           IPGPEGVRGRNSD+TLI E+LGWAPTMK K+ LR TYFWIKEQ+EKEKAQGIDLS YGSS
Sbjct: 296 IPGPEGVRGRNSDNTLIKEKLGWAPTMKLKNGLRFTYFWIKEQLEKEKAQGIDLSTYGSS 355

Query: 346 NVVATQAPVQLGSPCAEDDKE 366
            VV TQAPVQLGS  A D KE
Sbjct: 356 KVVGTQAPVQLGSLRAADGKE 376

Source: Actinidia rufa

Species: Actinidia rufa

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115482032|ref|NP_001064609.1| Os10g0417600 [Oryza sativa Japonica Group] gi|152032497|sp|A3C4S4.1|GME1_ORYSJ RecName: Full=GDP-mannose 3,5-epimerase 1; Short=GDP-Man 3,5-epimerase 1; AltName: Full=OsGME-1 gi|20042976|gb|AAM08784.1|AC016780_14 Putative epimerase/dehydratase [Oryza sativa] gi|54650506|dbj|BAD66930.1| GDP-mannose-3'',5''-epimerase [Oryza sativa Japonica Group] gi|75265514|gb|ABA18619.1| putative epimerase/dehydratase [Oryza sativa Indica Group] gi|110289081|gb|ABB47619.2| NAD dependent epimerase/dehydratase family protein, expressed [Oryza sativa Japonica Group] gi|113639218|dbj|BAF26523.1| Os10g0417600 [Oryza sativa Japonica Group] gi|125574803|gb|EAZ16087.1| hypothetical protein OsJ_31532 [Oryza sativa Japonica Group] gi|215740821|dbj|BAG96977.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 289/383 (75%), Positives = 315/383 (82%), Gaps = 30/383 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YGE TY +LERE +WPS KLRIS  G GGFI S+IARRLKSE HY         IIA
Sbjct: 8   GTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHY---------IIA 58

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIM 118

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYG
Sbjct: 119 YNNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 176

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFE 223
           LEKLATE LCKHYTKDF IECR VG                EKAPAAF RKA TSTD FE
Sbjct: 177 LEKLATEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 235

Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEIILSFE+ +LPI
Sbjct: 236 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPI 295

Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEK QG+D++ YG
Sbjct: 296 HHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYG 355

Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV+TQAPVQLGS  A D KE
Sbjct: 356 SSKVVSTQAPVQLGSLRAADGKE 378

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242039695|ref|XP_002467242.1| hypothetical protein SORBIDRAFT_01g021890 [Sorghum bicolor] gi|241921096|gb|EER94240.1| hypothetical protein SORBIDRAFT_01g021890 [Sorghum bicolor]

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 288/382 (75%), Positives = 313/382 (81%), Gaps = 30/382 (7%)

Query: 3   TSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS 62
           T+YGE TY +LERE +WPS KLRIS  G GGFI S+IARRLKSE HY         IIAS
Sbjct: 9   TAYGEYTYAELEREPYWPSEKLRISITGAGGFIGSHIARRLKSEGHY---------IIAS 59

Query: 63  DWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMY 122
           DW KNEHM EDMFCHEFHLVDLRVMDNCL++T GVD++ NLAADMGGMGFIQSNHSVIMY
Sbjct: 60  DWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTQGVDHVFNLAADMGGMGFIQSNHSVIMY 119

Query: 123 KNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYGL 180
            NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQLDT+V  KES+AWPAEPQDAYGL
Sbjct: 120 NNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGL 177

Query: 181 EKLATEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFEM 224
           EKLATE LCKHYTKDF IECR VG                EKAPAAF RKA TST+ FEM
Sbjct: 178 EKLATEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTERFEM 236

Query: 225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH 284
           WGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFE+ KLPIH
Sbjct: 237 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDRKLPIH 296

Query: 285 PIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGS 344
            IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEK QG+D++ YGS
Sbjct: 297 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAAYGS 356

Query: 345 SNVVATQAPVQLGSPCAEDDKE 366
           S VV+TQAPVQLGS  A D KE
Sbjct: 357 SKVVSTQAPVQLGSLRAADGKE 378

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|146432257|gb|ABQ41112.1| GDP-mannose-3',5'-epimerase [Vitis vinifera]

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 286/382 (74%), Positives = 314/382 (82%), Gaps = 28/382 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT+YG  TY++LERE +W S KLRIS  G GGFI S+IARRLK+E HY         IIA
Sbjct: 6   GTTYGAYTYEELEREPYWQSEKLRISITGAGGFIASHIARRLKTEGHY---------IIA 56

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFCHEF LVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 57  SDWKKNEHMTEDMFCHEFRLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIM 116

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
           Y NT ISF+MLEA+R+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYG
Sbjct: 117 YNNTMISFNMLEASRINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 174

Query: 180 LEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEM 224
           LEKLATE LCKHYTKDF IECR+                 EKAPAAF RKA+TSTD FEM
Sbjct: 175 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEM 234

Query: 225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH 284
           WGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN+ LPIH
Sbjct: 235 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIH 294

Query: 285 PIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGS 344
            IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LRITYFWIKEQ+EKEK +GIDLSIYGS
Sbjct: 295 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKEQIEKEKVKGIDLSIYGS 354

Query: 345 SNVVATQAPVQLGSPCAEDDKE 366
           S VV TQAPVQLGS  A D KE
Sbjct: 355 SKVVGTQAPVQLGSLRAADGKE 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224035479|gb|ACN36815.1| unknown [Zea mays]

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 286/382 (74%), Positives = 313/382 (81%), Gaps = 30/382 (7%)

Query: 3   TSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS 62
           T+YGE TY +LERE +WPS KLRIS+ G GGFI S+IARRLK+E HY         IIAS
Sbjct: 9   TAYGEYTYAELEREPYWPSEKLRISTTGAGGFIGSHIARRLKNEGHY---------IIAS 59

Query: 63  DWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMY 122
           DW KNEHM EDMFCHEFHLVDLRVMDNCL++T GVD++ NLAADMGGMGFIQSNHSVIMY
Sbjct: 60  DWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTHGVDHVFNLAADMGGMGFIQSNHSVIMY 119

Query: 123 KNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYGL 180
            NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQLDT+V  KES+AWPAEPQDAYGL
Sbjct: 120 NNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGL 177

Query: 181 EKLATEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFEM 224
           EKLATE LCKHYTKDF IECR VG                EKAPAAF RKA TST+ FEM
Sbjct: 178 EKLATEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTERFEM 236

Query: 225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH 284
           WGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+L FE+ KLPIH
Sbjct: 237 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFEDRKLPIH 296

Query: 285 PIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGS 344
            IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEK QG+D++ YGS
Sbjct: 297 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAAYGS 356

Query: 345 SNVVATQAPVQLGSPCAEDDKE 366
           S VV+TQAPVQLGS  A D KE
Sbjct: 357 SKVVSTQAPVQLGSLRAADGKE 378

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
TAIR|locus:2150441	377	GME ""GDP-D-mannose 3',5'-epim	0.972	0.944	0.679	2.1e-132
TAIR|locus:2030973	328	GER2 [Arabidopsis thaliana (ta	0.325	0.362	0.296	2.8e-11
ZFIN|ZDB-GENE-020419-37	418	uxs1 "UDP-glucuronic acid deca	0.797	0.698	0.236	1.5e-09
TAIR|locus:2197264	323	GER1 ""GDP-4-keto-6-deoxymanno	0.316	0.359	0.284	4.3e-09
TIGR_CMR|BA_0507	321	BA_0507 "NAD-dependent epimera	0.784	0.894	0.239	4.9e-09
TIGR_CMR|GSU_1815	311	GSU_1815 "NAD-dependent epimer	0.775	0.913	0.246	5.8e-09
TIGR_CMR|CJE_1513	323	CJE_1513 "NAD-dependent epimer	0.797	0.904	0.230	1.9e-08
UNIPROTKB|F1SU22	397	UXS1 "Uncharacterized protein"	0.792	0.730	0.229	5.2e-08
UNIPROTKB|B3KV61	363	UXS1 "UDP-glucuronate decarbox	0.792	0.798	0.229	5.6e-08
TAIR|locus:2081675	445	AUD1 "AT3G62830" [Arabidopsis	0.816	0.671	0.216	6.5e-08

TAIR|locus:2150441 GME ""GDP-D-mannose 3',5'-epimerase"" [Arabidopsis thaliana (taxid:3702)]

 Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
 Identities = 259/381 (67%), Positives = 295/381 (77%)

Query:     2 GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
             GT YG  TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IA
Sbjct:     6 GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 56

Query:    62 SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
             SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct:    57 SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 116

Query:   122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACI-YPEFKQLDTDVKESEAWPAEPQDAYGL 180
             Y NT ISF+M+EAAR+NG+    +   +     + + +  +  +KES+AWPAEPQDAYGL
Sbjct:   117 YNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGL 176

Query:   181 EKLATEGLCKHYTKDFEIECRL---------VG------EKAPAAFSRKAVTSTDNFEMW 225
             EKLATE LCKHY KDF IECR+          G      EKAPAAF RKA TSTD FEMW
Sbjct:   177 EKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMW 236

Query:   226 GDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP 285
             GDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPIH 
Sbjct:   237 GDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHH 296

Query:   286 IPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSS 345
             IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YGSS
Sbjct:   297 IPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSS 356

Query:   346 NVVATQAPVQLGSPCAEDDKE 366
              VV TQAPVQLGS  A D KE
Sbjct:   357 KVVGTQAPVQLGSLRAADGKE 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA

GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS

GO:0051287 "NAD binding" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2030973 GER2 [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
 Identities = 38/128 (29%), Positives = 61/128 (47%)

Query:   211 FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK--SDFREPLNIGSDEMVSINE 268
             F      + D   +WG G   R    +D+  +  + L+   S F E +N+GS   V+I E
Sbjct:   204 FHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGF-EHVNVGSGVEVTIKE 262

Query:   269 MAEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWI 325
             +AE++   + F+  KL +     P+G   +  D + +   LGW P +  KD L  TY W 
Sbjct:   263 LAELVKEVVGFKG-KL-VWDTTKPDGTPRKLMDSSKL-ASLGWTPKISLKDGLSQTYEWY 319

Query:   326 KEQVEKEK 333
              E V ++K
Sbjct:   320 LENVVQKK 327

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0042350 "GDP-L-fucose biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

ZFIN|ZDB-GENE-020419-37 uxs1 "UDP-glucuronic acid decarboxylase 1" [Danio rerio (taxid:7955)]

 Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 77/325 (23%), Positives = 139/325 (42%)

Query:    25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
             RI   G  GF+ S++  +L  + H  T + N  +      N  EH +     HE F L++
Sbjct:    88 RILITGGAGFVGSHLTDKLMMDGHEVTVVDN--FFTGRKRNV-EHWIG----HENFELIN 140

Query:    84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
               V++    +   VD + +LA+      ++  N    +  NT  + +ML  A+  G   L
Sbjct:   141 HDVVEP---LYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLL 196

Query:   144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
                  S++ +Y  PE    + D       P  P+  Y   K   E +C  Y K   +E R
Sbjct:   197 ---LASTSEVYGDPEVHPQNEDYW-GHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 252

Query:   202 LV------GEK-------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
             +       G +         + F  +A+   +   ++G G QTR+  ++ + V G++ L+
Sbjct:   253 VARIFNTFGSRMHMNDGRVVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVSLM 311

Query:   249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
              S+   P+N+G+ E  +I E A++I S    +  I  +P   +  + R  D       LG
Sbjct:   312 NSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLG 371

Query:   308 WAPTMKQKDELRITYFWIKEQVEKE 332
             W P +  ++ L  T  +   ++E +
Sbjct:   372 WEPVVPLEEGLNKTIQYFSRELEHQ 396

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0051216 "cartilage development" evidence=IMP

GO:0001503 "ossification" evidence=IMP

GO:0030166 "proteoglycan biosynthetic process" evidence=IMP

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IMP

GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=IGI;IMP

GO:0030198 "extracellular matrix organization" evidence=IGI;IMP

GO:0050650 "chondroitin sulfate proteoglycan biosynthetic process" evidence=IGI;IMP

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

TAIR|locus:2197264 GER1 ""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1"" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
 Identities = 35/123 (28%), Positives = 57/123 (46%)

Query:   211 FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI-KSDFREPLNIGSDEMVSINEM 269
             F    V   +   +WG G   R    +D+  +  + L+ +    E +NIGS + V+I E+
Sbjct:   201 FHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIREL 260

Query:   270 AEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK 326
             AE++   + FE  KL       P+G   +  D + +   LGW P +  +D L  TY W  
Sbjct:   261 AELVKEVVGFEG-KLG-WDCTKPDGTPRKLMDSSKL-ASLGWTPKVSLRDGLSQTYDWYL 317

Query:   327 EQV 329
             + V
Sbjct:   318 KNV 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0006005 "L-fucose biosynthetic process" evidence=IDA

GO:0019853 "L-ascorbic acid biosynthetic process" evidence=IMP

GO:0050577 "GDP-L-fucose synthase activity" evidence=IDA

TIGR_CMR|BA_0507 BA_0507 "NAD-dependent epimerase/dehydratase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 159 (61.0 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 77/322 (23%), Positives = 144/322 (44%)

Query:    30 GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD- 88
             G  GFI S++A  L   R Y+ +I +  Y       K ++   D    E  ++ + V+D 
Sbjct:     9 GGAGFIGSHLAEELVG-RGYNVTIVDNFY-------KGKNKYHDELMKEIRVIPISVLDK 60

Query:    89 NCL-RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
             N +  + +  D + +LAA +G    ++ +  +I   N   + ++L+AA + G   + F  
Sbjct:    61 NSIYELVNQHDVVFHLAAILGVKTTMEKSIELIE-TNFDGTRNILQAA-LKGKKKVVF-- 116

Query:   148 VSSACIYPEFKQ-LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD-FEIEC----R 201
              S++ +Y + K     +        ++ + +Y + K   E LC  Y  +   +       
Sbjct:   117 ASTSEVYGKAKPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYALEGLPVTIVRYFN 176

Query:   202 LVGEKA---PAA--FSR--KAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR- 253
             + G +A   P A    R   A    ++  ++GDG+QTR  T++ + VE  +R +      
Sbjct:   177 IYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMDEKVNG 236

Query:   254 EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-------GPEGVRGRNSDDTLINEEL 306
             E +NIGS+   SI E+AE+I    +    I  +P       G E +  R  D T + + +
Sbjct:   237 EIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLV 296

Query:   307 GWAPTMKQKDELRITYFWIKEQ 328
              +   +  +D L+ T  W +E+
Sbjct:   297 QFQAKVTWEDGLKETIKWFREE 318

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0003824 "catalytic activity" evidence=ISS

TIGR_CMR|GSU_1815 GSU_1815 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
 Identities = 79/320 (24%), Positives = 136/320 (42%)

Query:    24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD 83
             +RI   G  GFI S++  RL  + H    + N  +   S  N  + +M+  F H F ++ 
Sbjct:     1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDN--FFTGSKRNI-DRLMD--F-HRFEVIR 54

Query:    84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAA---RMNGV 140
               +++  L     VD + NLA     + + Q N    +  +   + +ML  A   R   +
Sbjct:    55 HDIIEPILLE---VDRIYNLACPASPVHY-QYNPVKTIKTSVMGTINMLGLAKRVRARIL 110

Query:   141 MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC 200
              + T        I+P+ +    +V      P   +  Y   K   E L   Y +   ++ 
Sbjct:   111 QASTSEVYGDPTIHPQPESYWGNVN-----PIGIRSCYDEGKRVAETLLMDYHRQNGVDI 165

Query:   201 RLV---GEKAP--AAFSRKAVTST-------DNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
             R+        P  A    + V++        ++  ++GDG QTRS  ++D+ ++G++ L+
Sbjct:   166 RIARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLM 225

Query:   249 KSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPI--HPIPGPEGVRGRNSDDTLINEE 305
             + D F  P+N+G+ E   I E A  I++       I   P+P  +  R R  D TL    
Sbjct:   226 EHDQFCGPVNLGNPEETPIIEFARRIIAMTGSSSQIIYRPLPSDDP-RQRQPDITLARTI 284

Query:   306 LGWAPTMKQKDELR--ITYF 323
             LGW P +   + L   I YF
Sbjct:   285 LGWEPRVSLDEGLAKTIEYF 304

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=ISS

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=ISS

TIGR_CMR|CJE_1513 CJE_1513 "NAD-dependent epimerase/dehydratase family protein" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
 Identities = 75/326 (23%), Positives = 135/326 (41%)

Query:    30 GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLV--DLRVM 87
             G  GFI S++   L  +     ++    Y   + W    H+ +  F  +  +V  DLR  
Sbjct:     8 GADGFIGSHLCESLVKKGFKVRALSQ--YNSFNFWG---HLEKSPFLKDMEVVSGDLRDS 62

Query:    88 DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
               C ++T  +D + +L A +  + +  +     +  N   + +MLEAA+ N +    F  
Sbjct:    63 FFCEKITKNIDAIFHLGA-LIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISH--FIH 119

Query:   148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV---- 203
              S++ +Y     +  D K     P +PQ  Y   K+A + +   Y   F +   +     
Sbjct:   120 TSTSEVYGTAFYVPIDEKH----PLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFN 175

Query:   204 --GEKAPA-AFSRKAVTS--TDNFEM-WGDGKQTRSLTFIDECVEGVLRLIK-SDFREPL 256
               G +  A A     +T   +   E+  GD    R L F+ +  EG + L+    F E  
Sbjct:   176 TYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGEVY 235

Query:   257 NIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNS-------DDTLINEELGWA 309
             NIGS    S+ E+  +I    + K+ I  I   + +R +NS       D   + +   W 
Sbjct:   236 NIGSGVEYSMQEVLNLIQKILDSKVKI--IQDEQRLRPKNSEVFRLCCDANKLKKATNWQ 293

Query:   310 PTMKQKDELRITYFWIKEQVEKEKAQ 335
               +  ++ LR +  + KE +E  K++
Sbjct:   294 SKISLEEGLRQSIEYFKENLENYKSE 319

GO:0003824 "catalytic activity" evidence=ISS

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

UNIPROTKB|F1SU22 UXS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 152 (58.6 bits), Expect = 5.2e-08, P = 5.2e-08
 Identities = 74/323 (22%), Positives = 137/323 (42%)

Query:    25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
             RI   G  GF+ S++  +L  + H  T + N  +      N  EH +     HE F L++
Sbjct:    67 RILITGGAGFVGSHLTDKLMMDGHEVTVVDN--FFTGRKRNV-EHWIG----HENFELIN 119

Query:    84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
               V++    +   VD + +LA+      ++  N    +  NT  + +ML  A+  G   L
Sbjct:   120 HDVVEP---LYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLL 175

Query:   144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
                  S++ +Y  PE     T+       P  P+  Y   K   E +C  Y K   +E R
Sbjct:   176 ---LASTSEVYGDPEVHP-QTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVR 231

Query:   202 LV------GEK-------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
             +       G +         + F  +A+   +   ++G G QTR+  ++ + V G++ L+
Sbjct:   232 VARIFNTFGPRMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 290

Query:   249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
              S+   P+N+G+ E  +I E A++I +       I  +    +  + R  D       LG
Sbjct:   291 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 350

Query:   308 WAPTMKQKDELRITYFWIKEQVE 330
             W P +  ++ L     + ++++E
Sbjct:   351 WEPVVPLEEGLNKAIHYFRKELE 373

GO:0005739 "mitochondrion" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 151 (58.2 bits), Expect = 5.6e-08, P = 5.6e-08
 Identities = 74/323 (22%), Positives = 136/323 (42%)

Query:    25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
             RI   G  GF+ S++  +L  + H  T + N  +      N  EH +     HE F L++
Sbjct:    33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDN--FFTGRKRNV-EHWIG----HENFELIN 85

Query:    84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
               V++    +   VD + +LA+      ++  N    +  NT  + +ML  A+  G   L
Sbjct:    86 HDVVEP---LYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLL 141

Query:   144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
                  S++ +Y  PE      D       P  P+  Y   K   E +C  Y K   +E R
Sbjct:   142 ---LASTSEVYGDPEVHPQSEDYW-GHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 197

Query:   202 LV------GEK-------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
             +       G +         + F  +A+   +   ++G G QTR+  ++ + V G++ L+
Sbjct:   198 VARIFNTFGPRMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 256

Query:   249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
              S+   P+N+G+ E  +I E A++I +       I  +    +  + R  D       LG
Sbjct:   257 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 316

Query:   308 WAPTMKQKDELRITYFWIKEQVE 330
             W P +  ++ L     + ++++E
Sbjct:   317 WEPVVPLEEGLNKAIHYFRKELE 339

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

TAIR|locus:2081675 AUD1 "AT3G62830" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 6.5e-08, P = 6.5e-08
 Identities = 71/328 (21%), Positives = 135/328 (41%)

Query:    24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD 83
             LR+   G  GF+ S++  RL +       + N          + E++M       F ++ 
Sbjct:   119 LRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFT------GRKENVMHHFSNPNFEMIR 172

Query:    84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
               V++  L     VD + +LA     + + + N    +  N   + +ML  A+  G    
Sbjct:   173 HDVVEPILLE---VDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGAR-- 226

Query:   144 TFFFVSSACIYPE-FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRL 202
              F   S++ +Y +  +    +       P   +  Y   K   E L   Y +   +E R+
Sbjct:   227 -FLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRI 285

Query:   203 V------GEK-------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK 249
                    G +         + F  +A+   +   ++GDGKQTRS  F+ + VEG++RL++
Sbjct:   286 ARIFNTYGPRMCIDDGRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLME 344

Query:   250 SDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-VRGRNSDDTLINEELGW 308
              +   P N+G+    ++ E+A+++    +    I   P  E     R  D T   E LGW
Sbjct:   345 GEHVGPFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGW 404

Query:   309 APTMKQKDELRITYFWIKEQVEKEKAQG 336
              P +  +  L +     +++V  ++ +G
Sbjct:   405 EPKVSLRQGLPLMVKDFRQRVFGDQKEG 432

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0042732 "D-xylose metabolic process" evidence=IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2Z7B3	GME1_ORYSI	5, ., 1, ., 3, ., 1, 8	0.7519	0.9644	0.9338	N/A	no
Q2R1V8	GME2_ORYSJ	5, ., 1, ., 3, ., 1, 8	0.7566	0.9508	0.9380	no	no
A3C4S4	GME1_ORYSJ	5, ., 1, ., 3, ., 1, 8	0.7545	0.9644	0.9338	yes	no
Q93VR3	GME_ARATH	5, ., 1, ., 3, ., 1, 8	0.7127	0.9672	0.9389	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.1.3.18	LOW CONFIDENCE prediction!
3rd Layer	5.1.3	0.983

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	366
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	0.0
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	1e-141
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-31
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-26
cd08946	200	cd08946, SDR_e, extended (e) SDRs	3e-23
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-22
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-21
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	5e-21
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	2e-16
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	1e-15
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	1e-11
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-10
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	2e-08
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	6e-08
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	6e-07
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	5e-06
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	4e-05
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	6e-05
PRK11908	347	PRK11908, PRK11908, NAD-dependent epimerase/dehydr	2e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-04
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	0.002

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score =  613 bits (1582), Expect = 0.0
 Identities = 281/381 (73%), Positives = 307/381 (80%), Gaps = 28/381 (7%)

Query: 3   TSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS 62
            SYG  T  +LERE +WPS KLRI   G GGFI S+IARRLK+E HY         IIAS
Sbjct: 1   ESYGAYTLAELEREPYWPSEKLRICITGAGGFIASHIARRLKAEGHY---------IIAS 51

Query: 63  DWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMY 122
           DW KNEHM EDMFCHEFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIMY
Sbjct: 52  DWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY 111

Query: 123 KNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYGL 180
            NT ISF+MLEAAR+NGV    FF+ SSACIYPEFKQL+T+V  KES+AWPAEPQDAYGL
Sbjct: 112 NNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 169

Query: 181 EKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFEMW 225
           EKLATE LCKHYTKDF IECR+                 EKAPAAF RKA+TSTD FEMW
Sbjct: 170 EKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMW 229

Query: 226 GDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP 285
           GDGKQTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI LSFEN+KLPI  
Sbjct: 230 GDGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKH 289

Query: 286 IPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSS 345
           IPGPEGVRGRNSD+TLI E+LGWAPTM+ KD LRITYFWIKEQ+EKEKA+G D + Y SS
Sbjct: 290 IPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKAEGSDAAAYSSS 349

Query: 346 NVVATQAPVQLGSPCAEDDKE 366
            VV TQAPVQLGS  A D KE
Sbjct: 350 KVVGTQAPVQLGSLRAADGKE 370

Length = 370

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score =  403 bits (1038), Expect = e-141
 Identities = 196/338 (57%), Positives = 242/338 (71%), Gaps = 32/338 (9%)

Query: 24  LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD 83
            R    G GGFI S++A RLK+E HY         +  +DW   EHM +     EFHLVD
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHY---------VRGADWKSPEHMTQPTDDDEFHLVD 51

Query: 84  LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
           LR M+NCL+ T GVD++ +LAADMGGMG+IQSNH+VIMY NT I+F+MLEAAR+NGV   
Sbjct: 52  LREMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVER- 110

Query: 144 TFFFVSSACIYPEFKQLDTDV---KESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC 200
            F F SSAC+YPEFKQL+T V   +E +AWPAEPQDAYG EKLATE LC+HY +D+ IE 
Sbjct: 111 -FLFASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDYGIET 169

Query: 201 RLV---------------GEKAPAAFSRKAVTSTDN--FEMWGDGKQTRSLTFIDECVEG 243
           R+V                EKAPAA  RK  T+ D   FE+WGDG QTRS T+ID+CVEG
Sbjct: 170 RIVRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEG 229

Query: 244 VLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI-HPIPGPEGVRGRNSDDTLI 302
           + RL++SDF EP+N+GSDEMVS+NE+AE++LSF  + L I H  PGP+GVRGRNSD+TL+
Sbjct: 230 LRRLMESDFGEPVNLGSDEMVSMNELAEMVLSFSGKPLEIIHHTPGPQGVRGRNSDNTLL 289

Query: 303 NEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLS 340
            EELGW P    ++ LRITYFWIKEQ+E EKA+  D+S
Sbjct: 290 KEELGWEPNTPLEEGLRITYFWIKEQIEAEKAKTSDVS 327

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  120 bits (303), Expect = 2e-31
 Identities = 85/318 (26%), Positives = 131/318 (41%), Gaps = 41/318 (12%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GFI S++  RL    H    + N         N  E   +     +F   D+R  + 
Sbjct: 6   GGAGFIGSHLVERLLERGHEVIVLDN--LSTGKKENLPEV--KPNV--KFIEGDIRDDEL 59

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQ-SNHSVIMYK--NTTISFDMLEAARMNGVMSLTFF 146
                 GVD + + AA       +  S    I     N   + ++LEAAR  GV    F 
Sbjct: 60  VEFAFEGVDYVFHQAA----QASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKR--FV 113

Query: 147 FVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC------ 200
           + SS+ +Y +   L  D    E  P  P   Y + K A E  C+ + + + +        
Sbjct: 114 YASSSSVYGDPPYLPKD----EDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLRYF 169

Query: 201 -----RLVGEKAPAA----FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
                R       AA    F  +A+       ++GDG+QTR  T++++ VE  L    + 
Sbjct: 170 NVYGPRQDPNGGYAAVIPIFIERALKGEP-PTIYGDGEQTRDFTYVEDVVEANLLAATAG 228

Query: 252 FR-EPLNIGSDEMVSINEMAEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELG 307
              E  NIG+ +  S+NE+AE+I   L  E E +   P PG   VR   +D +   + LG
Sbjct: 229 AGGEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGD--VRHSLADISKAKKLLG 286

Query: 308 WAPTMKQKDELRITYFWI 325
           W P +  ++ LR+T  W 
Sbjct: 287 WEPKVSFEEGLRLTVEWF 304

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  106 bits (267), Expect = 2e-26
 Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 38/322 (11%)

Query: 29  IGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW--NKNEHMMEDMFCHEFHLVDLRV 86
            G  GFI S++  RL +  H          +   D   +  + ++  +      L D  +
Sbjct: 6   TGGAGFIGSHLVERLLAAGHD---------VRGLDRLRDGLDPLLSGVEFVVLDLTDRDL 56

Query: 87  MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFF 146
           +D         D + +LAA         S+ +  +  N   + ++LEAAR  GV    F 
Sbjct: 57  VD--ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV--KRFV 112

Query: 147 FVSS-ACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV-- 203
           F SS + +Y +       + E    P  P + YG+ KLA E L + Y + + +   ++  
Sbjct: 113 FASSVSVVYGDPP--PLPIDEDLG-PPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRP 169

Query: 204 ------GEKAPAA------FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
                 G+K   +      F R+ +       + GDG QTR   ++D+  + +L  +++ 
Sbjct: 170 FNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP 229

Query: 252 FREPLNIGSDEM-VSINEMAEIILSFENEKLP-IHPIPGPEG---VRGRNSDDTLINEEL 306
                NIGS    +++ E+AE +      K P I  IP         G+  D +     L
Sbjct: 230 DGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAAL 289

Query: 307 GWAPTMKQKDELRITYFWIKEQ 328
           GW P +  ++ L  T  W+ ++
Sbjct: 290 GWEPKVSLEEGLADTLEWLLKK 311

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 95.4 bits (238), Expect = 3e-23
 Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 26/182 (14%)

Query: 96  GVDNMS---NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC 152
            +D +    +LAA +G       N       N   + ++LEAAR  GV    F + SSA 
Sbjct: 27  VIDRLDVVVHLAALVGVPASWD-NPDEDFETNVVGTLNLLEAARKAGV--KRFVYASSAS 83

Query: 153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIE------------- 199
           +Y   + L     E E  P  P   YG+ KLA E L + Y + + +              
Sbjct: 84  VYGSPEGLP----EEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPG 139

Query: 200 CRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLN 257
            R   +     F R+A+       ++G G QTR    +D+ V  +L  +++        N
Sbjct: 140 QRPRLDGVVNDFIRRALE-GKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYN 198

Query: 258 IG 259
           IG
Sbjct: 199 IG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 95.8 bits (239), Expect = 2e-22
 Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 41/319 (12%)

Query: 25  RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL 84
           RI   G  GFI S++  RL  E +    + N L       N         F   F   DL
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDN-LSS-GRRENIEPEFENKAF--RFVKRDL 56

Query: 85  RVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLT 144
               + +      D + +LAA+   +    ++  + + +N   ++++LEA R NGV    
Sbjct: 57  LDTADKVAKK-DGDTVFHLAAN-PDVRLGATDPDIDLEENVLATYNVLEAMRANGVK--R 112

Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC---R 201
             F SS+ +Y E K + T     E +P  P   YG  KLA E L   Y   F  +    R
Sbjct: 113 IVFASSSTVYGEAKVIPTP----EDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFR 168

Query: 202 L---VGEKAPAA----FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFRE 254
               VG ++       F  K   + +  E+ GDG+Q +S  ++ +CV+ +L   +    E
Sbjct: 169 FANIVGPRSTHGVIYDFINKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEK-STE 227

Query: 255 P---LNIGSDEMVSINEMAEIILSFENEKLPIHP---IPGPEGVRGRNSDDTLIN----- 303
                N+G+D+ +S+NE+AEI++    E+L + P     G  G RG   D   +      
Sbjct: 228 GVNIFNLGNDDTISVNEIAEIVI----EELGLKPRFKYSG--GDRGWKGDVPYMRLDIEK 281

Query: 304 -EELGWAPTMKQKDELRIT 321
            + LGW P    ++ +R T
Sbjct: 282 LKALGWKPRYNSEEAVRKT 300

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 4/104 (3%)

Query: 226 GDGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPI- 283
           GDG QTRS  ++ + VEG++RL+ SD F  P+N+G+ E  +I E+AE++      K  I 
Sbjct: 203 GDGTQTRSFQYVSDLVEGLIRLMNSDYFGGPVNLGNPEEFTILELAELVKKLTGSKSEIV 262

Query: 284 -HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK 326
             P+P  +  + R  D +   E LGW P +  ++ LR T  + +
Sbjct: 263 FLPLP-EDDPKRRRPDISKAKELLGWEPKVPLEEGLRRTIEYFR 305

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 90.0 bits (224), Expect = 5e-21
 Identities = 59/246 (23%), Positives = 89/246 (36%), Gaps = 33/246 (13%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GFI S++ RRL  E +    +                         FH  DL   D 
Sbjct: 5   GGTGFIGSHLVRRLLQEGYEVIVL-----GRRRRSESLNTGRIR-----FHEGDLTDPDA 54

Query: 90  CLRMTSGV--DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
             R+ + V  D + +LAA  G     +   +  +  N   +  +LEAAR  GV    F F
Sbjct: 55  LERLLAEVQPDAVIHLAAQSGVGASFEDP-ADFIRANVLGTLRLLEAARRAGVKR--FVF 111

Query: 148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIE------CR 201
            SS+ +Y +      D   +E  P  P   Y   KLA E L + Y + + +         
Sbjct: 112 ASSSEVYGD----VADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFN 167

Query: 202 LVGEKAPAAFSRKAVT-------STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR- 253
           + G   P  F    +              + GDG Q R   ++D+    +L  ++     
Sbjct: 168 VYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGG 227

Query: 254 EPLNIG 259
           E  NIG
Sbjct: 228 EIYNIG 233

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 70/324 (21%), Positives = 121/324 (37%), Gaps = 36/324 (11%)

Query: 29  IGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLV--DLR 85
            G  GFI S++  RL  E H   ++   +Y   + W      + D   H+ FH +  D+R
Sbjct: 5   TGADGFIGSHLTERLLREGHEVRAL--DIYNSFNSWG-----LLDNAVHDRFHFISGDVR 57

Query: 86  VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTF 145
                  +    D + +LAA +       +  S +   N   + ++LEAA +     +  
Sbjct: 58  DASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYV-ETNVFGTLNVLEAACVLYRKRVVH 116

Query: 146 FFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV-- 203
              S++ +Y   + +  D      +  +P+  Y   K   + L   Y + F +   ++  
Sbjct: 117 T--STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRP 174

Query: 204 ----GEK----APAAFSRKAVTSTDNFEMWGDGKQTRSLTF----------IDECVEGVL 245
               G +    A                  GDG  TR   F          I + +E V 
Sbjct: 175 FNTYGPRQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDILDAIEAVG 234

Query: 246 RLIKSDFREPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINE 304
            +I +   E ++IG+    + + E+ E++L    +    +  PG   V  R  D      
Sbjct: 235 EIINNGSGEEISIGNPAVELIVEELGEMVL-IVYDDHREYR-PGYSEVERRIPDIRKAKR 292

Query: 305 ELGWAPTMKQKDELRITYFWIKEQ 328
            LGW P    +D LR T  W K+Q
Sbjct: 293 LLGWEPKYSLRDGLRETIEWFKDQ 316

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 45/254 (17%)

Query: 103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT 162
           LAA +GG+    +  +  +  N  I+ +++ AA   GV      F+ S+CIYP+      
Sbjct: 58  LAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVK--KLVFLGSSCIYPDLAPQPI 115

Query: 163 DVKESEAW---PAEPQDAYGLEKLATEGLCKHYTK----DFE--IECRLVGEK------- 206
           D  ES+     P    + Y + K A   LC+ Y K    D+   +   L G         
Sbjct: 116 D--ESDLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDYISVMPTNLYGPHDNFDPEN 173

Query: 207 ---APA---AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS-DFREPLNIG 259
               PA    F    +       +WG G   R   + D+    ++ L+++ D    +N+G
Sbjct: 174 SHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDLARAIVFLLENYDEPIIVNVG 233

Query: 260 SDEMVSINEMAEII---LSFENE------KLPIHPIPGPEGVRGRNSDDTLINEELGWAP 310
           S   +SI E+AE I   + F+ E      K        P+G   +  D + +   LGW P
Sbjct: 234 SGVEISIRELAEAIAEVVGFKGEIVFDTSK--------PDGQPRKLLDVSKLR-ALGWFP 284

Query: 311 TMKQKDELRITYFW 324
               +  +R TY W
Sbjct: 285 FTPLEQGIRETYEW 298

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 49/266 (18%)

Query: 103 LAADMGGMGFIQSNHSV-IMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD 161
            AA +GG+      +    + +N  I  ++++AA  +GV  L F    S+CIYP+F    
Sbjct: 56  AAAKVGGI-HANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFL--GSSCIYPKFAPQP 112

Query: 162 TDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKD-------------------FEIECR 201
                    P EP  + Y + K+A   +C+ Y                      F  E  
Sbjct: 113 IPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENS 172

Query: 202 LVGEKAPA---AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS-DFREPLN 257
            V    PA    F            +WG G   R    +D+  + V+ L++     E +N
Sbjct: 173 HV---IPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAEHVN 229

Query: 258 IGSDEMVSINEMAEII---------LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGW 308
           +GS + V+I E+AE++         L ++  K        P+G   +  D + +   LGW
Sbjct: 230 VGSGDEVTIKELAELVKEVVGFEGELVWDTSK--------PDGTPRKLMDSSKL-RSLGW 280

Query: 309 APTMKQKDELRITYFWIKEQVEKEKA 334
            P    KD L+ TY W  E  E    
Sbjct: 281 DPKFSLKDGLQETYKWYLENYETGGK 306

Length = 306

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 74/331 (22%), Positives = 124/331 (37%), Gaps = 61/331 (18%)

Query: 25  RISSIGVGGFIPSNIARRLKSE--------RHYSTSIPNALYIIASDWNKNEHMMEDMF- 75
           R+  +G  GFI S++   L  E        R           +        +++  D   
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGGV--------DYIKGDYEN 52

Query: 76  CHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDML 132
             +                 G+D + +LA+         +   N  + +  N   +  +L
Sbjct: 53  RADLE-----------SALVGIDTVIHLASTT----NPATSNKNPILDIQTNVAPTVQLL 97

Query: 133 EAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGL---- 188
           EA    G+  +  F  S   +Y   +QL      SE+ P  P  +YG+ KLA E      
Sbjct: 98  EACAAAGIGKI-IFASSGGTVYGVPEQLPI----SESDPTLPISSYGISKLAIEKYLRLY 152

Query: 189 CKHYTKDFEIECRL---VGEKA---------PAAFSRKAVTSTDNFEMWGDGKQTRSLTF 236
              Y  D+ +  R+    G            P A ++  +   +  E+WGDG+  R   +
Sbjct: 153 QYLYGLDYTV-LRISNPYGPGQRPDGKQGVIPIALNK--ILRGEPIEIWGDGESIRDYIY 209

Query: 237 IDECVEGVLRLIKSDFREPL-NIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRG 294
           ID+ VE ++ L++S   E + NIGS    S+ E+   I       + +   P     V  
Sbjct: 210 IDDLVEALMALLRSKGLEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPARTTDVPK 269

Query: 295 RNSDDTLINEELGWAPTMKQKDELRITYFWI 325
              D +    ELGW+P +  +D L  T+ WI
Sbjct: 270 IVLDISRARAELGWSPKISLEDGLEKTWQWI 300

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 73/344 (21%), Positives = 128/344 (37%), Gaps = 65/344 (18%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIP--NALYIIASDWNKNEHMMEDM-FCHEFHLVDLRV 86
           G  GFI  ++A+RL         I   N  Y    D    E  +E +     F  V   +
Sbjct: 7   GAAGFIGFHVAKRLLERGDEVVGIDNLNDYY----DVRLKEARLELLGKSGGFKFVKGDL 62

Query: 87  -----MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM 141
                +    +     D + +LAA  G    +++ H+  +  N     ++LE  R  GV 
Sbjct: 63  EDREALRRLFKDHE-FDAVIHLAAQAGVRYSLENPHAY-VDSNIVGFLNLLELCRHFGVK 120

Query: 142 SLTFFFVSSACIYPEFKQLDTDVKESEAWPA-EPQDAYGLEKLATEGLCKHYTKDFEIEC 200
            L +   SS+ +Y     L+T +  SE      P   Y   K A E +   Y+  + I  
Sbjct: 121 HLVY--ASSSSVY----GLNTKMPFSEDDRVDHPISLYAATKKANELMAHTYSHLYGIPT 174

Query: 201 RLVG-------------EKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL 247
              G             + A   F++  +      +++ DG  +R  T+ID+ VEGV+R 
Sbjct: 175 --TGLRFFTVYGPWGRPDMALFLFTKAILEGKP-IDVFNDGNMSRDFTYIDDIVEGVVRA 231

Query: 248 IKSDFREP-------------------LNIGSDEMVSINEMAEII---LSFENEK--LPI 283
           + +  +                      NIG++  V + +  E +   L  + +K  LP+
Sbjct: 232 LDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIEALEKALGKKAKKNYLPM 291

Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
                   V    +D + +   LG+ P    ++ ++    W KE
Sbjct: 292 Q----KGDVPETYADISKLQRLLGYKPKTSLEEGVKRFVEWYKE 331

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score = 53.8 bits (129), Expect = 6e-08
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           ++GDGKQTRS  F+ + VEG++RL++ +   P N+G+    ++ E+A+++    +    I
Sbjct: 320 VYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKI 379

Query: 284 HPIPGPE-GVRGRNSDDTLINEELGWAP 310
              P  E     R  D T   E LGW P
Sbjct: 380 EFRPNTEDDPHKRKPDITKAKELLGWEP 407

Length = 442

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 50.8 bits (121), Expect = 6e-07
 Identities = 68/319 (21%), Positives = 126/319 (39%), Gaps = 45/319 (14%)

Query: 23  KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLV 82
           +LRI   G  GF+ S++  +L         I N          + E+++       F L+
Sbjct: 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFT------GRKENLVHLFGNPRFELI 173

Query: 83  DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS 142
              V++  L     VD + +LA     + + + N    +  N   + +ML  A+  G   
Sbjct: 174 RHDVVEPILLE---VDQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGA-- 227

Query: 143 LTFFFVSSACIYPEFKQLDTDVKESEAW----PAEPQDAYGLEKLATEGLCKHYTKDFEI 198
             F   S++ +Y +   L+   KE+  W    P   +  Y   K   E L   Y +   +
Sbjct: 228 -RFLLTSTSEVYGD--PLEHPQKET-YWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGV 283

Query: 199 ECRL------------------VGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC 240
           E R+                  V         ++ +T      ++GDGKQTRS  ++ + 
Sbjct: 284 EVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMT------VYGDGKQTRSFQYVSDL 337

Query: 241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-PEGVRGRNSDD 299
           V+G++ L++ +   P N+G+    ++ E+AE++    +    I   P   +    R  D 
Sbjct: 338 VDGLVALMEGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDI 397

Query: 300 TLINEELGWAPTMKQKDEL 318
           +   E L W P +  ++ L
Sbjct: 398 SKAKELLNWEPKISLREGL 416

Length = 436

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 47.5 bits (114), Expect = 5e-06
 Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 226 GDGKQTRSLTFIDECVEGVLR-LIKSDFREPLNIGSDEMVSINEMAEIILSF--ENEKLP 282
           GDG   R   ++++    +   L K    E  NIG    ++  E+ ++IL    ++E L 
Sbjct: 208 GDGLNVRDWLYVEDHARAIELVLEKGRVGEIYNIGGGNELTNLELVKLILELLGKDESL- 266

Query: 283 IHPIPGPEGVRGRNS-DDTLINEELGWAPTMKQKDELRITYFWIKE 327
           I  +    G   R + D + I  ELGW P +  ++ LR T  W  E
Sbjct: 267 ITYVKDRPGHDRRYAIDSSKIRRELGWRPKVSFEEGLRKTVRWYLE 312

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 66/281 (23%), Positives = 109/281 (38%), Gaps = 36/281 (12%)

Query: 67  NEHMMEDMFCHEFHLVDLRVMD--NCLRMTSGVDNMSNLAAD-------MGGMGFIQSNH 117
           N   +ED   + F   D+   +  + L      D + + AA+        G   FI++N 
Sbjct: 42  NLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETN- 100

Query: 118 SVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA 177
            V+       ++ +LEA R        F  +S+  +Y +   L+     +E  P  P   
Sbjct: 101 -VVG------TYTLLEAVR-KYWHEFRFHHISTDEVYGD---LEKGDAFTETTPLAPSSP 149

Query: 178 YGLEKLATEGLCKHYTKDFEIECRLVG-----------EKAPAAFSRKAVTSTDNFEMWG 226
           Y   K A++ L + Y + + +   +             EK        A+       ++G
Sbjct: 150 YSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAG-KPLPVYG 208

Query: 227 DGKQTRSLTFIDECVEGV-LRLIKSDFREPLNIGSDEMVSINEMAEIILSF--ENEKLPI 283
           DG+Q R   ++++    + L L K    E  NIG     +  E+ E IL    ++E L  
Sbjct: 209 DGQQVRDWLYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLIT 268

Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFW 324
           H    P   R    D + I  ELGWAP    ++ LR T  W
Sbjct: 269 HVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQW 309

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 58/259 (22%), Positives = 98/259 (37%), Gaps = 52/259 (20%)

Query: 83  DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQ-SNHSVIMYKNTTI--SFDMLEAARMNG 139
           D+R  D+  +   G D + +LAA +     I  S  +   Y +T +  + ++L+AAR  G
Sbjct: 57  DIRDPDSVRKAMKGCDVVFHLAALIA----IPYSYIAPDSYVDTNVTGTLNVLQAARDLG 112

Query: 140 VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIE 199
           V        S++ +Y   +     V   E  P + Q  Y   K+  + L   + + F   
Sbjct: 113 VEK--VVHTSTSEVYGTAQY----VPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNT- 165

Query: 200 CRLVGEKAPAAFSR-----------KAVTST--------DNFEMWGDGKQTRSLTFIDEC 240
                   P    R           +AV  T              G    TR   ++ + 
Sbjct: 166 --------PVTIIRPFNTYGPRQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDT 217

Query: 241 VEGVLRLIKSD--FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNS- 297
           V G + + +SD    E +NIGS+  +SI +  ++I      ++ I      E +R   S 
Sbjct: 218 VRGFIAIAESDKTVGEVINIGSNFEISIGDTVKLIAEIMGSEVEI--ETDEERLRPEKSE 275

Query: 298 ------DDTLINEELGWAP 310
                 D++ I E  GW P
Sbjct: 276 VERLWCDNSKIKELTGWQP 294

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 21/128 (16%)

Query: 228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGS-DEMVSINEMAEIILSFENE--- 279
           G Q R+ T ID+ ++ ++++I++       +  NIG+     S+ E+A  +L    E   
Sbjct: 217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE 276

Query: 280 ------KLPIHPIP-------GPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK 326
                 K+ +           G + V+ R        +ELGWAP     D LR  +   +
Sbjct: 277 YAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYR 336

Query: 327 EQVEKEKA 334
             V + +A
Sbjct: 337 GHVAEARA 344

Length = 347

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 71/341 (20%), Positives = 100/341 (29%), Gaps = 92/341 (26%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GFI   +  +L S                                    V L  + +
Sbjct: 6   GANGFIGRALVDKLLSRGEEVRIAVRNAENAEPS------------------VVLAELPD 47

Query: 90  CL---RMTSGVDNMSNLAA---DMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
                 +  GVD + +LAA    M   G      S     NT ++  +  AA   GV   
Sbjct: 48  IDSFTDLFLGVDAVVHLAARVHVMNDQG--ADPLSDYRKVNTELTRRLARAAARQGVK-- 103

Query: 144 TFFFVSSACIYPEFKQLDTDVKE-SEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRL 202
            F F+SS  +  E     T      E  P  PQDAYG  KL  E              R 
Sbjct: 104 RFVFLSSVKVNGE----GTVGAPFDETDPPAPQDAYGRSKLEAE--------------RA 145

Query: 203 VGEKAPAAFSRKAVT----------STDNFEM------------WGDGKQTRSLTFIDEC 240
           +  +  A+   + V              NF               G  K  RSL  +D  
Sbjct: 146 L-LELGASDGMEVVILRPPMVYGPGVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNL 204

Query: 241 VEGVLRLI-KSDFREPLNIGSDEM-VSINEMAEIILSFENEKLPIHPIPGPEGVRGRNS- 297
           V+ +   I          + SD   VS  E+ + I        P   +P P G+    + 
Sbjct: 205 VDAIYLCISLPKAANGTFLVSDGPPVSTAELVDEIR--RALGKPTRLLPVPAGLLRFAAK 262

Query: 298 -----------------DDTLINEELGWAPTMKQKDELRIT 321
                            D      ELGW P +  ++ L+ T
Sbjct: 263 LLGKRAVIQRLFGSLQYDPEKTQNELGWRPPISLEEGLQET 303

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 29/198 (14%)

Query: 120 IMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG 179
           +M  N   S  +L+     G+    F + SSA  Y + +    + +E E     P + YG
Sbjct: 87  MMENNYQYSKRLLDWCAEKGIP---FIYASSAATYGDGEAGFREGRELE----RPLNVYG 139

Query: 180 LEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAF-------SRKAVT 217
             K   +   +       +  ++VG +               A  AF       +   V 
Sbjct: 140 YSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVK 199

Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFE 277
              + E + DG+Q R   ++ + V+  L L+++      N+G+    S N++A+ +    
Sbjct: 200 LFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLENGVSGIFNLGTGRARSFNDLADAVFKAL 259

Query: 278 NEKLPIHPIPGPEGVRGR 295
            +   I  IP PE +RGR
Sbjct: 260 GKDEKIEYIPMPEALRGR 277

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
PRK05865	854	hypothetical protein; Provisional	99.98
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN02583	297	cinnamoyl-CoA reductase	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.94
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.94
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.92
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.92
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.91
PRK12320	699	hypothetical protein; Provisional	99.91
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.88
KOG2774	366	consensus NAD dependent epimerase [General functio	99.88
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.87
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.87
PRK06482	276	short chain dehydrogenase; Provisional	99.86
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.85
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.84
PRK07806	248	short chain dehydrogenase; Provisional	99.84
PRK06194	287	hypothetical protein; Provisional	99.84
PRK05875	276	short chain dehydrogenase; Provisional	99.83
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.83
PRK07074	257	short chain dehydrogenase; Provisional	99.82
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.82
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.82
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.81
PRK09135	249	pteridine reductase; Provisional	99.81
PRK06180	277	short chain dehydrogenase; Provisional	99.81
PRK08263	275	short chain dehydrogenase; Provisional	99.8
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK12746	254	short chain dehydrogenase; Provisional	99.8
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.8
PRK07067	257	sorbitol dehydrogenase; Provisional	99.8
PRK07775	274	short chain dehydrogenase; Provisional	99.8
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.79
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.79
PRK07774	250	short chain dehydrogenase; Provisional	99.79
PRK06914	280	short chain dehydrogenase; Provisional	99.79
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK05993	277	short chain dehydrogenase; Provisional	99.78
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK08219	227	short chain dehydrogenase; Provisional	99.78
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.78
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.78
PRK12828	239	short chain dehydrogenase; Provisional	99.77
PRK06138	252	short chain dehydrogenase; Provisional	99.77
PRK06182	273	short chain dehydrogenase; Validated	99.77
PRK07060	245	short chain dehydrogenase; Provisional	99.77
PRK06181	263	short chain dehydrogenase; Provisional	99.77
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK06179	270	short chain dehydrogenase; Provisional	99.76
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.76
PRK05876	275	short chain dehydrogenase; Provisional	99.76
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK08017	256	oxidoreductase; Provisional	99.76
PRK12827	249	short chain dehydrogenase; Provisional	99.75
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.75
PRK06128	300	oxidoreductase; Provisional	99.75
PRK06398	258	aldose dehydrogenase; Validated	99.75
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.75
PRK12939	250	short chain dehydrogenase; Provisional	99.75
PRK12829	264	short chain dehydrogenase; Provisional	99.75
PRK07856	252	short chain dehydrogenase; Provisional	99.75
PRK09186	256	flagellin modification protein A; Provisional	99.75
PRK08324	681	short chain dehydrogenase; Validated	99.74
PRK06701	290	short chain dehydrogenase; Provisional	99.74
PRK06841	255	short chain dehydrogenase; Provisional	99.74
PRK09134	258	short chain dehydrogenase; Provisional	99.74
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.74
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.74
PRK10538	248	malonic semialdehyde reductase; Provisional	99.74
PRK12937	245	short chain dehydrogenase; Provisional	99.74
PRK05717	255	oxidoreductase; Validated	99.73
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK12747	252	short chain dehydrogenase; Provisional	99.73
PRK07890	258	short chain dehydrogenase; Provisional	99.73
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.73
PRK08264	238	short chain dehydrogenase; Validated	99.73
PRK07985	294	oxidoreductase; Provisional	99.72
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.72
PRK09291	257	short chain dehydrogenase; Provisional	99.72
PRK07825	273	short chain dehydrogenase; Provisional	99.72
PRK07577	234	short chain dehydrogenase; Provisional	99.72
PLN02253	280	xanthoxin dehydrogenase	99.72
PRK07454	241	short chain dehydrogenase; Provisional	99.72
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.72
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK06123	248	short chain dehydrogenase; Provisional	99.71
PRK07326	237	short chain dehydrogenase; Provisional	99.71
PRK06523	260	short chain dehydrogenase; Provisional	99.71
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.71
PRK07024	257	short chain dehydrogenase; Provisional	99.71
PRK05693	274	short chain dehydrogenase; Provisional	99.7
PRK05650	270	short chain dehydrogenase; Provisional	99.7
PRK07478	254	short chain dehydrogenase; Provisional	99.7
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK07035	252	short chain dehydrogenase; Provisional	99.7
PRK08251	248	short chain dehydrogenase; Provisional	99.7
PRK06197	306	short chain dehydrogenase; Provisional	99.7
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.7
PRK05866	293	short chain dehydrogenase; Provisional	99.69
PRK07041	230	short chain dehydrogenase; Provisional	99.69
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.69
PRK06500	249	short chain dehydrogenase; Provisional	99.69
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.69
PRK12744	257	short chain dehydrogenase; Provisional	99.69
PRK08643	256	acetoin reductase; Validated	99.69
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.69
PRK06114	254	short chain dehydrogenase; Provisional	99.69
PRK07814	263	short chain dehydrogenase; Provisional	99.69
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK08628	258	short chain dehydrogenase; Provisional	99.68
PRK07063	260	short chain dehydrogenase; Provisional	99.68
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.68
PRK12742	237	oxidoreductase; Provisional	99.68
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.68
PRK08267	260	short chain dehydrogenase; Provisional	99.68
PRK06196	315	oxidoreductase; Provisional	99.68
PRK08339	263	short chain dehydrogenase; Provisional	99.67
PRK07102	243	short chain dehydrogenase; Provisional	99.67
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.67
PRK08265	261	short chain dehydrogenase; Provisional	99.67
PRK12743	256	oxidoreductase; Provisional	99.67
PRK06172	253	short chain dehydrogenase; Provisional	99.67
PRK07109	334	short chain dehydrogenase; Provisional	99.67
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.67
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.67
PRK06101	240	short chain dehydrogenase; Provisional	99.67
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.67
PRK07904	253	short chain dehydrogenase; Provisional	99.66
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.66
PRK06483	236	dihydromonapterin reductase; Provisional	99.66
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.66
PRK08278	273	short chain dehydrogenase; Provisional	99.66
PRK07576	264	short chain dehydrogenase; Provisional	99.66
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.66
PRK09242	257	tropinone reductase; Provisional	99.66
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.66
PRK07023	243	short chain dehydrogenase; Provisional	99.66
PRK09072	263	short chain dehydrogenase; Provisional	99.66
PRK07578	199	short chain dehydrogenase; Provisional	99.66
PRK07069	251	short chain dehydrogenase; Validated	99.66
PRK05867	253	short chain dehydrogenase; Provisional	99.66
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.65
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.65
PRK06949	258	short chain dehydrogenase; Provisional	99.64
PRK06057	255	short chain dehydrogenase; Provisional	99.64
PRK08226	263	short chain dehydrogenase; Provisional	99.64
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK08589	272	short chain dehydrogenase; Validated	99.63
PRK06924	251	short chain dehydrogenase; Provisional	99.63
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.63
PRK07677	252	short chain dehydrogenase; Provisional	99.63
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.62
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.62
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.62
PRK05884	223	short chain dehydrogenase; Provisional	99.61
PRK05854	313	short chain dehydrogenase; Provisional	99.61
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.6
PRK12367	245	short chain dehydrogenase; Provisional	99.6
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.6
PRK06139	330	short chain dehydrogenase; Provisional	99.6
PRK06953	222	short chain dehydrogenase; Provisional	99.6
COG2910	211	Putative NADH-flavin reductase [General function p	99.6
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.59
PRK08177	225	short chain dehydrogenase; Provisional	99.59
PRK07831	262	short chain dehydrogenase; Provisional	99.59
PRK06198	260	short chain dehydrogenase; Provisional	99.59
PRK05872	296	short chain dehydrogenase; Provisional	99.59
PRK07062	265	short chain dehydrogenase; Provisional	99.58
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.58
PRK08703	239	short chain dehydrogenase; Provisional	99.58
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.58
PRK06125	259	short chain dehydrogenase; Provisional	99.57
PRK06484	520	short chain dehydrogenase; Validated	99.57
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.57
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.56
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.56
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.56
PRK07201	657	short chain dehydrogenase; Provisional	99.56
PRK07791	286	short chain dehydrogenase; Provisional	99.56
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.55
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.55
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK07832	272	short chain dehydrogenase; Provisional	99.54
PRK06940	275	short chain dehydrogenase; Provisional	99.53
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.53
PRK05855	582	short chain dehydrogenase; Validated	99.52
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.52
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.51
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.5
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.48
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.48
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.46
PRK06484	520	short chain dehydrogenase; Validated	99.45
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.45
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.44
PLN02780	320	ketoreductase/ oxidoreductase	99.44
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.43
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.43
PRK08303	305	short chain dehydrogenase; Provisional	99.42
PRK05599	246	hypothetical protein; Provisional	99.41
PLN00015	308	protochlorophyllide reductase	99.33
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.31
PRK08862	227	short chain dehydrogenase; Provisional	99.3
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.29
KOG1208	314	consensus Dehydrogenases with different specificit	99.29
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.25
KOG0725	270	consensus Reductases with broad range of substrate	99.25
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.24
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.24
COG1028	251	FabG Dehydrogenases with different specificities (	99.24
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.23
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.19
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.18
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.16
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.15
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.14
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.12
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.07
PLN00106	323	malate dehydrogenase	99.03
PTZ00325	321	malate dehydrogenase; Provisional	99.01
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.97
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.97
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.96
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.9
PRK06720	169	hypothetical protein; Provisional	98.81
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.76
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.76
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.72
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.69
PRK08309	177	short chain dehydrogenase; Provisional	98.69
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.67
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.58
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.5
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.5
PRK09620	229	hypothetical protein; Provisional	98.49
PRK05086	312	malate dehydrogenase; Provisional	98.47
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.43
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.39
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.32
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.29
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.26
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.21
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.19
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.16
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.09
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.09
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.04
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.98
PRK14982	340	acyl-ACP reductase; Provisional	97.97
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.95
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.94
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.83
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.83
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.79
PRK05442	326	malate dehydrogenase; Provisional	97.75
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.73
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.71
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.71
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.64
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.64
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.63
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.61
COG3268	382	Uncharacterized conserved protein [Function unknow	97.6
PRK09496	453	trkA potassium transporter peripheral membrane com	97.6
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.55
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.53
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.5
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.48
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.47
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.46
PLN02383	344	aspartate semialdehyde dehydrogenase	97.43
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.41
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.39
PRK04148	134	hypothetical protein; Provisional	97.37
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.36
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.35
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.34
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.3
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.29
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.26
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.24
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.23
PRK09496	453	trkA potassium transporter peripheral membrane com	97.22
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.2
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.16
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.15
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.15
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.14
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.13
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.08
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.07
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.07
PTZ00117	319	malate dehydrogenase; Provisional	97.05
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.04
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.04
PRK06223	307	malate dehydrogenase; Reviewed	97.02
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.0
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.98
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.96
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.96
PRK08328	231	hypothetical protein; Provisional	96.92
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.92
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.91
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.89
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.89
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.89
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.87
PLN02602	350	lactate dehydrogenase	96.85
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.84
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.8
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.8
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.79
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.78
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.78
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.77
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.76
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.76
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.76
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.75
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.73
PRK08223	287	hypothetical protein; Validated	96.72
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.68
PRK07877	722	hypothetical protein; Provisional	96.66
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.66
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.65
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.65
PRK08655	437	prephenate dehydrogenase; Provisional	96.63
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.62
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.62
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.59
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.58
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.58
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.57
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.57
PRK10669	558	putative cation:proton antiport protein; Provision	96.54
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.54
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.48
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.48
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.46
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.45
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.45
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.45
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.42
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.42
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.4
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.38
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.37
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.35
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.31
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.28
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.26
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.26
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.24
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.21
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.2
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.18
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.17
PRK07574	385	formate dehydrogenase; Provisional	96.16
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.11
PRK07411	390	hypothetical protein; Validated	96.09
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.09
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.07
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.06
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.03
PRK06849	389	hypothetical protein; Provisional	96.03
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.02
PRK07417	279	arogenate dehydrogenase; Reviewed	95.98
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.97
PRK10537	393	voltage-gated potassium channel; Provisional	95.96
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.96
PRK08818	370	prephenate dehydrogenase; Provisional	95.95
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	95.95
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.94
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.94
PLN02494	477	adenosylhomocysteinase	95.92
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.89
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.88
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.87
PRK13303	265	L-aspartate dehydrogenase; Provisional	95.83
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.83
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	95.8
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.8
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.79
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.79
PRK14852	989	hypothetical protein; Provisional	95.77
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.76
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.76
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.75
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.75
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.75
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.74
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.72
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	95.71
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.7
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.7
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.66
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	95.65
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.64
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.61
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.6
PRK06444	197	prephenate dehydrogenase; Provisional	95.58
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.58
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.58
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.56
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.53
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.53
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	95.53
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.52
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.51
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.5
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	95.48
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	95.48
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.46
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.46
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.46
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	95.45
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.45
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	95.44
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	95.44
PRK14851	679	hypothetical protein; Provisional	95.43
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.43
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.41
PRK06395	435	phosphoribosylamine--glycine ligase; Provisional	95.41
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.41
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.28
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.28
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.22
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.21
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.2
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.2
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.2

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=6.6e-52  Score=390.37  Aligned_cols=352  Identities=79%  Similarity=1.242  Sum_probs=302.0

Q ss_pred             ccCcccccccccCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEcc
Q 044498            4 SYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD   83 (366)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D   83 (366)
                      |||..+...++++..|+..+|+|||||||||||++|++.|.++|++         |++++|............++++.+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~---------V~~v~r~~~~~~~~~~~~~~~~~~D   72 (370)
T PLN02695          2 SYGAYTLAELEREPYWPSEKLRICITGAGGFIASHIARRLKAEGHY---------IIASDWKKNEHMSEDMFCHEFHLVD   72 (370)
T ss_pred             CccccchhhcCCCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCE---------EEEEEeccccccccccccceEEECC
Confidence            7899999999999999999999999999999999999999999999         9999986543222222235788999


Q ss_pred             CCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCC--
Q 044498           84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD--  161 (366)
Q Consensus        84 ~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~--  161 (366)
                      +++.+.+.+++.++|+|||+|+..+.......++...+..|+.++.+|+++|++.+++  +|||+||.++||.....+  
T Consensus        73 l~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk--~~V~~SS~~vYg~~~~~~~~  150 (370)
T PLN02695         73 LRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVK--RFFYASSACIYPEFKQLETN  150 (370)
T ss_pred             CCCHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCC--EEEEeCchhhcCCccccCcC
Confidence            9999988888889999999999764322333445566789999999999999999999  999999999999764321  


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEec
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~~  226 (366)
                      .++.|++..+..|.+.|+.+|.++|+++..+++.++++++++|+.               .+..|+..++..+.++.+++
T Consensus       151 ~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g  230 (370)
T PLN02695        151 VSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWG  230 (370)
T ss_pred             CCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeC
Confidence            123565545778899999999999999999998889999999632               24567777776557888899


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHHHHHc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEEL  306 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~~~~l  306 (366)
                      ++++.++|+|++|+++++..+++...+++||+++++.+|+.|+++.+.+..|.+.++...|.+........|++|++++|
T Consensus       231 ~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~sk~~~~l  310 (370)
T PLN02695        231 DGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVRGRNSDNTLIKEKL  310 (370)
T ss_pred             CCCeEEeEEeHHHHHHHHHHHHhccCCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCccccccCHHHHHHhc
Confidence            99999999999999999999888766789999999999999999999999998777766666656666789999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhhhcCCceeeecccccccccCccccCCCCccccCC
Q 044498          307 GWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPVQLGSPCAEDDKE  366 (366)
Q Consensus       307 G~~p~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (366)
                      ||.|+++++++|+++++|+++......+++....+|.+|.+|.+|+|||+||.-|.|.||
T Consensus       311 gw~p~~~l~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (370)
T PLN02695        311 GWAPTMRLKDGLRITYFWIKEQIEKEKAEGSDAAAYSSSKVVGTQAPVQLGSLRAADGKE  370 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHhhhccccchhhhcccccccccCceeccccccccCCC
Confidence            999999999999999999999999999999999999999999999999999999999886

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.7e-49  Score=342.41  Aligned_cols=288  Identities=22%  Similarity=0.312  Sum_probs=252.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccccc-ceEEEccCCChhHHHhhhc--CCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFC-HEFHLVDLRVMDNCLRMTS--GVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~-v~~~~~D~~~~~~l~~~~~--~~d~v  100 (366)
                      |+||||||+||||+|.+.+|++.|++         |+++++..+.+....... ++++++|+.|.+.+.++++  ++|.|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~---------vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaV   71 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHE---------VVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAV   71 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCe---------EEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEE
Confidence            68999999999999999999999999         999998877655433222 5999999999999999986  69999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      ||+||.... ..+..+|..+++.|+.+|.+|++++++++++  +|||.||+++||.....|+  +|+.  +..|.++||.
T Consensus        72 iHFAa~~~V-gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~--~~vFSStAavYG~p~~~PI--~E~~--~~~p~NPYG~  144 (329)
T COG1087          72 VHFAASISV-GESVQNPLKYYDNNVVGTLNLIEAMLQTGVK--KFIFSSTAAVYGEPTTSPI--SETS--PLAPINPYGR  144 (329)
T ss_pred             EECcccccc-chhhhCHHHHHhhchHhHHHHHHHHHHhCCC--EEEEecchhhcCCCCCccc--CCCC--CCCCCCcchh
Confidence            999998764 4667899999999999999999999999999  9999999999999988765  7766  8889999999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEeC----------------C----CcHHHHHHHHHhCCCCeEEec------CCcceeee
Q 044498          181 EKLATEGLCKHYTKDFEIECRLVG----------------E----KAPAAFSRKAVTSTDNFEMWG------DGKQTRSL  234 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~~~~i~r----------------~----~~~~~~~~~~~~~~~~~~i~~------~~~~~~~~  234 (366)
                      ||++.|++++.+++.++++++++|                +    ..++..++-++.+...+.++|      +|...|||
T Consensus       145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDY  224 (329)
T COG1087         145 SKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDY  224 (329)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeee
Confidence            999999999999999999999995                1    133555555666566688886      45678999


Q ss_pred             eeHHHHHHHHHHHHhc---C-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCC-cccccChHHHHHHcCCC
Q 044498          235 TFIDECVEGVLRLIKS---D-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGV-RGRNSDDTLINEELGWA  309 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~---~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-~~~~~~~~k~~~~lG~~  309 (366)
                      |||.|+|++.+.+++.   . ...+||+++|+..|+.|+++.+.++.|++.+++..|.+.++ +..+.|.+|++++|||+
T Consensus       225 IHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~  304 (329)
T COG1087         225 IHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQ  304 (329)
T ss_pred             eehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCCceeEeCHHHHHHHhCCC
Confidence            9999999999999865   2 33699999999999999999999999999999999987765 45689999999999999


Q ss_pred             CCC-CHHHHHHHHHHHHHH
Q 044498          310 PTM-KQKDELRITYFWIKE  327 (366)
Q Consensus       310 p~~-~~~e~l~~~~~~~~~  327 (366)
                      |++ ++++.+++...|.+.
T Consensus       305 p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         305 PTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             cccCCHHHHHHHHHHHhhh
Confidence            999 999999999999984

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=6.1e-48  Score=332.26  Aligned_cols=300  Identities=21%  Similarity=0.250  Sum_probs=256.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc------ccccccccceEEEccCCChhHHHhhhc--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE------HMMEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~------~~~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      |++|||||.||||+++++.++++..+       ..|+.++...-.      .......++.|+++|+.|.+.+.++++  
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-------~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPD-------DHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCC-------ceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc
Confidence            58999999999999999999987532       117777754321      112234467999999999999999997  


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ  175 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~  175 (366)
                      ++|+|+|+|+-++.. .+-.+|..++++|+.||.+||++++++..+ .||+++||..|||.-......++|.  +|..|.
T Consensus        74 ~~D~VvhfAAESHVD-RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~~~~FtE~--tp~~Ps  149 (340)
T COG1088          74 QPDAVVHFAAESHVD-RSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLDDDAFTET--TPYNPS  149 (340)
T ss_pred             CCCeEEEechhcccc-ccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCCCCCcccC--CCCCCC
Confidence            699999999988743 556788899999999999999999999742 2799999999999876643223555  499999


Q ss_pred             CchHHHHHHHHHHHHHHHHHcCCcEEEeCC-----------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          176 DAYGLEKLATEGLCKHYTKDFEIECRLVGE-----------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                      ++|+.||+.++.+++.+.+++|++++|.|.           ..++.++.+++. +.+++++|+|.+.|||+||+|-++++
T Consensus       150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~-g~~lpvYGdG~~iRDWl~VeDh~~ai  228 (340)
T COG1088         150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALL-GKPLPVYGDGLQIRDWLYVEDHCRAI  228 (340)
T ss_pred             CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHc-CCCCceecCCcceeeeEEeHhHHHHH
Confidence            999999999999999999999999999952           356777888887 89999999999999999999999999


Q ss_pred             HHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC-----CCcCCCCC-CCcccccChHHHHHHcCCCCCCCHHHH
Q 044498          245 LRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP-----IHPIPGPE-GVRGRNSDDTLINEELGWAPTMKQKDE  317 (366)
Q Consensus       245 ~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-----~~~~~~~~-~~~~~~~~~~k~~~~lG~~p~~~~~e~  317 (366)
                      ..++... .|++||++++...+.-|+++.|.+.+|+..+     +.++..++ .+.++.+|.+|++++|||.|+++|++|
T Consensus       229 ~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~G  308 (340)
T COG1088         229 DLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETG  308 (340)
T ss_pred             HHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHH
Confidence            9999886 6999999999999999999999999998877     66766554 477778999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhc
Q 044498          318 LRITYFWIKEQVEKEKAQ  335 (366)
Q Consensus       318 l~~~~~~~~~~~~~~~~~  335 (366)
                      |+++++||.+|..+..+.
T Consensus       309 lrkTv~WY~~N~~Ww~~l  326 (340)
T COG1088         309 LRKTVDWYLDNEWWWEPL  326 (340)
T ss_pred             HHHHHHHHHhchHHHhhh
Confidence            999999999998887764

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.4e-45  Score=314.85  Aligned_cols=321  Identities=29%  Similarity=0.424  Sum_probs=272.8

Q ss_pred             CCcccCcccccccccCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccc
Q 044498            1 MGTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMF   75 (366)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~   75 (366)
                      +|++|+..+.....+...|+.+.++|+||||.||||+||++.|..+||+         |++++.-.......     ...
T Consensus         5 ~~~~~~~~~~~~~~~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~---------VIa~Dn~ftg~k~n~~~~~~~~   75 (350)
T KOG1429|consen    5 KGTATGAPNNPSRLREQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHE---------VIALDNYFTGRKENLEHWIGHP   75 (350)
T ss_pred             ccccccCCCCcchhhhcccCCCCcEEEEecCcchHHHHHHHHHHhcCCe---------EEEEecccccchhhcchhccCc
Confidence            4677888888888888888889999999999999999999999999999         99999755433222     122


Q ss_pred             cceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           76 CHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        76 ~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      .++.+.-|+..+     ++.++|-|+|+|+..+++.+ ..++-..+..|+.++.+++-.|+..+ +  ||+++||+.|||
T Consensus        76 ~fel~~hdv~~p-----l~~evD~IyhLAapasp~~y-~~npvktIktN~igtln~lglakrv~-a--R~l~aSTseVYg  146 (350)
T KOG1429|consen   76 NFELIRHDVVEP-----LLKEVDQIYHLAAPASPPHY-KYNPVKTIKTNVIGTLNMLGLAKRVG-A--RFLLASTSEVYG  146 (350)
T ss_pred             ceeEEEeechhH-----HHHHhhhhhhhccCCCCccc-ccCccceeeecchhhHHHHHHHHHhC-c--eEEEeecccccC
Confidence            345555555554     67889999999999886543 46777889999999999999999988 4  899999999999


Q ss_pred             CCCCCCCCcccccC---CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeC-------------CCcHHHHHHHHHhCC
Q 044498          156 EFKQLDTDVKESEA---WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG-------------EKAPAAFSRKAVTST  219 (366)
Q Consensus       156 ~~~~~~~~~~e~~~---~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r-------------~~~~~~~~~~~~~~~  219 (366)
                      +....|.  +|+.+   .|..|..-|...|..+|.++.+|.++.|++++|.|             +.++..|..++++ +
T Consensus       147 dp~~hpq--~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr-~  223 (350)
T KOG1429|consen  147 DPLVHPQ--VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALR-G  223 (350)
T ss_pred             CcccCCC--ccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhc-C
Confidence            9766553  66654   36678889999999999999999999999999985             3456778888887 8


Q ss_pred             CCeEEecCCcceeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCc-CCCCCCCcccccC
Q 044498          220 DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP-IPGPEGVRGRNSD  298 (366)
Q Consensus       220 ~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~  298 (366)
                      .++.++++|.|.|+|.||+|++++++.+++++..+.+|+++++.+|+.|+++++.+..+....+++ .+.+.+...+..|
T Consensus       224 epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pD  303 (350)
T KOG1429|consen  224 EPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPD  303 (350)
T ss_pred             CCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCcc
Confidence            999999999999999999999999999999999999999999999999999999999976555544 4567788889999


Q ss_pred             hHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhhhcCCceeee
Q 044498          299 DTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIY  342 (366)
Q Consensus       299 ~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~  342 (366)
                      +.++++.|||.|+.+++|+|..++.|++++.....+++.....+
T Consensus       304 it~ake~LgW~Pkv~L~egL~~t~~~fr~~i~~~~~~gs~~~~~  347 (350)
T KOG1429|consen  304 ITKAKEQLGWEPKVSLREGLPLTVTYFRERIAREKKKGSSKPVA  347 (350)
T ss_pred             HHHHHHHhCCCCCCcHHHhhHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999999999888877555443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1e-43  Score=332.76  Aligned_cols=291  Identities=20%  Similarity=0.203  Sum_probs=236.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----------cccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----------EDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----------~~~~~v~~~~~D~~~~~~l   90 (366)
                      .+|+|||||||||||++|+++|+++|++         |++++|.......           ....++.++.+|+.+.+.+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~---------V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l   84 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQT---------VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDC   84 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCE---------EEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence            6689999999999999999999999999         9999885432110           0112468899999999999


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      .++++++|+|||+|+..+.. ....++..++++|+.++.+++++|++.+++  +|||+||.++||.....+.  .|+  .
T Consensus        85 ~~~~~~~d~ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--~~v~~SS~~vyg~~~~~~~--~e~--~  157 (348)
T PRK15181         85 QKACKNVDYVLHQAALGSVP-RSLKDPIATNSANIDGFLNMLTAARDAHVS--SFTYAASSSTYGDHPDLPK--IEE--R  157 (348)
T ss_pred             HHHhhCCCEEEECccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEeechHhhCCCCCCCC--CCC--C
Confidence            99999999999999976432 334566778999999999999999999999  9999999999997554432  443  3


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                      +..|.++|+.+|.++|.++..+.+.++++++++|+.               ++..++..++. +.++.+++++.+.++|+
T Consensus       158 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~-~~~i~~~g~g~~~rd~i  236 (348)
T PRK15181        158 IGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLK-DEPIYINGDGSTSRDFC  236 (348)
T ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHc-CCCcEEeCCCCceEeeE
Confidence            667889999999999999999988889999999521               34566666665 67788889999999999


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhcCCCC------CCCcCCCC-CCCcccccChHHHHH
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAEIILSFENEKL------PIHPIPGP-EGVRGRNSDDTLINE  304 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~------~~~~~~~~-~~~~~~~~~~~k~~~  304 (366)
                      |++|+|++++.++...    .+++||+++++.+|+.|+++.+.+.++...      .+...+.+ .......+|.+|+++
T Consensus       237 ~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  316 (348)
T PRK15181        237 YIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKT  316 (348)
T ss_pred             EHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHH
Confidence            9999999999877542    468999999999999999999999887321      11222222 223456789999999


Q ss_pred             HcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          305 ELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       305 ~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      +|||.|+++++|+|+++++|++.+.
T Consensus       317 ~lGw~P~~sl~egl~~~~~w~~~~~  341 (348)
T PRK15181        317 FLSYEPEFDIKEGLKQTLKWYIDKH  341 (348)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHhc
Confidence            9999999999999999999998763

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.4e-41  Score=323.17  Aligned_cols=290  Identities=22%  Similarity=0.319  Sum_probs=236.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      +.|||||||||||||++|+++|+++|++         |++++|.......     ....+++++.+|+.+..     +.+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~---------V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~~~  184 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDE---------VIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----LLE  184 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE---------EEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----ccC
Confidence            5589999999999999999999999999         9999875321110     01124678888887653     468


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC---CCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA---WPAE  173 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~---~~~~  173 (366)
                      +|+|||+|+..... ....++...++.|+.++.+|+++|++.++   +|||+||.+|||.....+.  .|+..   .+..
T Consensus       185 ~D~ViHlAa~~~~~-~~~~~p~~~~~~Nv~gT~nLleaa~~~g~---r~V~~SS~~VYg~~~~~p~--~E~~~~~~~p~~  258 (436)
T PLN02166        185 VDQIYHLACPASPV-HYKYNPVKTIKTNVMGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLEHPQ--KETYWGNVNPIG  258 (436)
T ss_pred             CCEEEECceeccch-hhccCHHHHHHHHHHHHHHHHHHHHHhCC---EEEEECcHHHhCCCCCCCC--CccccccCCCCC
Confidence            99999999975432 23346778899999999999999999874   7999999999997654442  55431   3566


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC-------------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGE-------------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                      |.+.|+.+|..+|+++..+++.++++++++|.             ..+..++.+++. +.++.+++++.+.++|+|++|+
T Consensus       259 p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~-~~~i~v~g~g~~~rdfi~V~Dv  337 (436)
T PLN02166        259 ERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIR-KQPMTVYGDGKQTRSFQYVSDL  337 (436)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhc-CCCcEEeCCCCeEEeeEEHHHH
Confidence            78899999999999999999888999998852             134567777776 6778888999999999999999


Q ss_pred             HHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccChHHHHHHcCCCCCCCHHHHHH
Q 044498          241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDDTLINEELGWAPTMKQKDELR  319 (366)
Q Consensus       241 a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~k~~~~lG~~p~~~~~e~l~  319 (366)
                      ++++..+++....++||+++++.+|+.|+++.|.+.+|.+..+.+.|.+. ......+|++|++++|||.|+++++++|+
T Consensus       338 a~ai~~~~~~~~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~  417 (436)
T PLN02166        338 VDGLVALMEGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLP  417 (436)
T ss_pred             HHHHHHHHhcCCCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHH
Confidence            99999999877778999999999999999999999999876666665443 33556789999999999999999999999


Q ss_pred             HHHHHHHHHHHHh
Q 044498          320 ITYFWIKEQVEKE  332 (366)
Q Consensus       320 ~~~~~~~~~~~~~  332 (366)
                      ++++||+++....
T Consensus       418 ~~i~~~~~~~~~~  430 (436)
T PLN02166        418 LMVSDFRNRILNE  430 (436)
T ss_pred             HHHHHHHHHhcCc
Confidence            9999999877554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.6e-41  Score=313.08  Aligned_cols=290  Identities=18%  Similarity=0.171  Sum_probs=225.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----ccc--------ccccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----MME--------DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~~~--------~~~~v~~~~~D~~~~~~l~   91 (366)
                      ++|||||||||||++|+++|+++|++         |++++|.....    ...        ...+++++.+|++|.+.+.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~   71 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYE---------VHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLR   71 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCE---------EEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHH
Confidence            58999999999999999999999999         99999875321    100        0234789999999999999


Q ss_pred             hhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCc-eeEEEEecccccCCCCCCCCCccccc
Q 044498           92 RMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS-LTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        92 ~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      ++++  ++|+|||+|+..+.. ....++...+++|+.++.+++++|++.+++. .+|||+||.++||.....+  ..|+.
T Consensus        72 ~~~~~~~~d~ViH~Aa~~~~~-~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~--~~E~~  148 (343)
T TIGR01472        72 RIIDEIKPTEIYNLAAQSHVK-VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIP--QNETT  148 (343)
T ss_pred             HHHHhCCCCEEEECCcccccc-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCC--CCCCC
Confidence            9887  479999999976531 2233456667889999999999999987521 1799999999999755433  24443


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC----------CcH----HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE----------KAP----AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~----------~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                        +..|.++|+.+|.++|.+++.++..+++++++.|.          ..+    ..++..+..+.....+++++.+.++|
T Consensus       149 --~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~  226 (343)
T TIGR01472       149 --PFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDW  226 (343)
T ss_pred             --CCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCc
Confidence              77899999999999999999999888888765421          112    22333444422234456889999999


Q ss_pred             eeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC-------------------cCC---CCCCC
Q 044498          235 TFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH-------------------PIP---GPEGV  292 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~---~~~~~  292 (366)
                      +|++|+|++++.+++++.+++||+++++++|+.|+++.+.+.+|.+..+.                   ..+   .+.+.
T Consensus       227 i~V~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (343)
T TIGR01472       227 GHAKDYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEV  306 (343)
T ss_pred             eeHHHHHHHHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCcc
Confidence            99999999999999876668999999999999999999999999654311                   111   12233


Q ss_pred             cccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Q 044498          293 RGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE  327 (366)
Q Consensus       293 ~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~  327 (366)
                      .....|++|++++|||.|+++++|+|+++++|+++
T Consensus       307 ~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       307 DLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             chhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            44567999999999999999999999999999984

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.2e-40  Score=318.84  Aligned_cols=291  Identities=23%  Similarity=0.324  Sum_probs=234.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      +.|||||||||||||++|+++|+++|++         |+++++.......     ....+++++.+|+.+..     +.+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~---------V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~  183 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDS---------VIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLE  183 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCE---------EEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcC
Confidence            5689999999999999999999999999         9999865321111     11235688889987753     457


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC---CCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA---WPAE  173 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~---~~~~  173 (366)
                      +|+|||+|+...+ .....++...++.|+.++.+|+++|++.++   ||||+||..+||.....+.  .|+..   .+..
T Consensus       184 ~D~ViHlAa~~~~-~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~---r~V~~SS~~VYg~~~~~p~--~E~~~~~~~P~~  257 (442)
T PLN02206        184 VDQIYHLACPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQ--VETYWGNVNPIG  257 (442)
T ss_pred             CCEEEEeeeecch-hhhhcCHHHHHHHHHHHHHHHHHHHHHhCC---EEEEECChHHhCCCCCCCC--CccccccCCCCC
Confidence            9999999997642 223346778899999999999999999885   7999999999987654442  55431   2455


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC-------------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGE-------------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                      +.+.|+.+|.++|+++..+.+.++++++++|.             ..+..++..++. ++++.+++++++.++|+|++|+
T Consensus       258 ~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~-~~~i~i~g~G~~~rdfi~V~Dv  336 (442)
T PLN02206        258 VRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDL  336 (442)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHc-CCCcEEeCCCCEEEeEEeHHHH
Confidence            67889999999999999998888999998852             123556676666 6778888999999999999999


Q ss_pred             HHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChHHHHHHcCCCCCCCHHHHHH
Q 044498          241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDTLINEELGWAPTMKQKDELR  319 (366)
Q Consensus       241 a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~  319 (366)
                      |++++.+++....++||+++++.+|+.|+++.+.+.+|.+..+.+.|.+ .+.....+|++|++++|||.|+++++|+|+
T Consensus       337 a~ai~~a~e~~~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~  416 (442)
T PLN02206        337 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLP  416 (442)
T ss_pred             HHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHH
Confidence            9999999987767899999999999999999999999877666555543 234556789999999999999999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 044498          320 ITYFWIKEQVEKEK  333 (366)
Q Consensus       320 ~~~~~~~~~~~~~~  333 (366)
                      ++++||++......
T Consensus       417 ~~~~~~~~~~~~~~  430 (442)
T PLN02206        417 LMVKDFRQRVFGDQ  430 (442)
T ss_pred             HHHHHHHHhhhccc
Confidence            99999998764433

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.8e-40  Score=310.99  Aligned_cols=295  Identities=18%  Similarity=0.219  Sum_probs=231.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCC-ChhHHHhhhcCCCE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLR-VMDNCLRMTSGVDN   99 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~-~~~~l~~~~~~~d~   99 (366)
                      ||+|||||||||||++|+++|++. |++         |++++|........ ...+++++.+|+. +.+.+.++++++|+
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~---------V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~   71 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWE---------VYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDV   71 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCe---------EEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCE
Confidence            578999999999999999999986 699         99999865322111 2235789999998 67778888889999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC----C-CCC
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW----P-AEP  174 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~----~-~~p  174 (366)
                      |||+|+...+. ....++...++.|+.++.+++++|++.+ +  ||||+||..+||.....+  +.|+...    + ..|
T Consensus        72 ViH~aa~~~~~-~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~--~~v~~SS~~vyg~~~~~~--~~ee~~~~~~~~~~~p  145 (347)
T PRK11908         72 ILPLVAIATPA-TYVKQPLRVFELDFEANLPIVRSAVKYG-K--HLVFPSTSEVYGMCPDEE--FDPEASPLVYGPINKP  145 (347)
T ss_pred             EEECcccCChH-HhhcCcHHHHHHHHHHHHHHHHHHHhcC-C--eEEEEecceeeccCCCcC--cCccccccccCcCCCc
Confidence            99999975432 3345777888999999999999999987 6  899999999999754433  2444321    1 246


Q ss_pred             CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-------------------cHHHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-------------------APAAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                      .+.|+.+|.++|+.+..++..++++++++|+.                   .+..++..+.. +.++.+++++.+.++|+
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~g~~~r~~i  224 (347)
T PRK11908        146 RWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR-GEPISLVDGGSQKRAFT  224 (347)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhC-CCceEEecCCceeeccc
Confidence            78999999999999999998889999999641                   12355556665 67777888888999999


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCC-CcccHHHHHHHHHHhcCCCCCC---------CcCCC-------CCCCcc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSD-EMVSINEMAEIILSFENEKLPI---------HPIPG-------PEGVRG  294 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~---------~~~~~-------~~~~~~  294 (366)
                      |++|+++++..+++++    .+++||++++ +.+|+.|+++.|.+.+|....+         ...+.       ......
T Consensus       225 ~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (347)
T PRK11908        225 DIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQN  304 (347)
T ss_pred             cHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhcc
Confidence            9999999999999874    3689999987 5899999999999998854332         11111       012234


Q ss_pred             cccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 044498          295 RNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEK  333 (366)
Q Consensus       295 ~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~  333 (366)
                      ...|.+|++++|||.|+++++++++++++|++++.....
T Consensus       305 ~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~~~~  343 (347)
T PRK11908        305 RVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVAEAR  343 (347)
T ss_pred             ccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            557899999999999999999999999999998775544

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.4e-40  Score=314.40  Aligned_cols=296  Identities=20%  Similarity=0.252  Sum_probs=227.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.|+|||||||||||++|+++|+++ |++         |++++|........       ...+++++.+|+.|.+.+.++
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~---------V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   83 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHK---------VLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGL   83 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCE---------EEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHH
Confidence            5578999999999999999999998 589         99998765321110       112578999999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC----
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA----  169 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~----  169 (366)
                      ++++|+|||+|+..... ....++...+..|+.++.+++++|++.+ +  ||||+||.++||.....+.  +|+.+    
T Consensus        84 ~~~~d~ViHlAa~~~~~-~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~--r~v~~SS~~vYg~~~~~~~--~e~~p~~~~  157 (386)
T PLN02427         84 IKMADLTINLAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENN-K--RLIHFSTCEVYGKTIGSFL--PKDHPLRQD  157 (386)
T ss_pred             hhcCCEEEEcccccChh-hhhhChHHHHHHHHHHHHHHHHHHHhcC-C--EEEEEeeeeeeCCCcCCCC--Ccccccccc
Confidence            99999999999976432 2233455667889999999999999887 7  9999999999997533211  11110    


Q ss_pred             ----------CC------CCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc----------------------HHHH
Q 044498          170 ----------WP------AEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA----------------------PAAF  211 (366)
Q Consensus       170 ----------~~------~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~----------------------~~~~  211 (366)
                                .+      ..|.+.|+.+|.++|+++..+++.++++++++|+..                      +..+
T Consensus       158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~  237 (386)
T PLN02427        158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF  237 (386)
T ss_pred             cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHH
Confidence                      00      134578999999999999999888899999997421                      1123


Q ss_pred             HHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC---CCCcEEecCC-CcccHHHHHHHHHHhcCCCCC-----
Q 044498          212 SRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD---FREPLNIGSD-EMVSINEMAEIILSFENEKLP-----  282 (366)
Q Consensus       212 ~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~-----  282 (366)
                      +..++. +.++.+++++.+.++|+|++|+|++++.+++++   .+++||++++ +.+|+.|+++.+.+.+|....     
T Consensus       238 ~~~~~~-~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~  316 (386)
T PLN02427        238 SNNLLR-REPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALE  316 (386)
T ss_pred             HHHHhc-CCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcccccccccc
Confidence            344444 677788888888999999999999999999874   3679999987 599999999999999885211     


Q ss_pred             C--CcCCC-------CCCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 044498          283 I--HPIPG-------PEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEK  333 (366)
Q Consensus       283 ~--~~~~~-------~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~  333 (366)
                      .  ...+.       .........|.+|++++|||+|+++++++|+++++|++......-
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~~~~~~  376 (386)
T PLN02427        317 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKTYAEAI  376 (386)
T ss_pred             ccccccCcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHHHHHHH
Confidence            1  01111       012345577999999999999999999999999999998875443

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.3e-39  Score=306.20  Aligned_cols=293  Identities=20%  Similarity=0.284  Sum_probs=229.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEE-EeCCCcccc----cc--ccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA-SDWNKNEHM----ME--DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~-~~r~~~~~~----~~--~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      |++|||||||||||+++++.|+++|++         +++ +++......    ..  ....+.++.+|++|.+.+.++++
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~---------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   71 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSD---------AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFT   71 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCC---------EEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHh
Confidence            578999999999999999999999987         654 444322110    00  11246788999999999999887


Q ss_pred             --CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc---------CCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 --GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN---------GVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                        ++|+|||+||.... .....++..++++|+.++.++++++.+.         +++  +||++||.++||.......++
T Consensus        72 ~~~~D~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~--~~i~~SS~~vyg~~~~~~~~~  148 (355)
T PRK10217         72 EHQPDCVMHLAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAF--RFHHISTDEVYGDLHSTDDFF  148 (355)
T ss_pred             hcCCCEEEECCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCce--EEEEecchhhcCCCCCCCCCc
Confidence              49999999997642 1223456778999999999999999863         467  899999999999653322223


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                      .|+.  +..|.+.|+.+|+++|.++..++++++++++++|+.           .+..++..+.. +.++.+++++++.++
T Consensus       149 ~E~~--~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~  225 (355)
T PRK10217        149 TETT--PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALA-GKPLPVYGNGQQIRD  225 (355)
T ss_pred             CCCC--CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhc-CCCceEeCCCCeeeC
Confidence            5543  667889999999999999999998889999998632           23445666665 667788899999999


Q ss_pred             eeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC------------CCcCCC-CCCCcccccCh
Q 044498          234 LTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP------------IHPIPG-PEGVRGRNSDD  299 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~------------~~~~~~-~~~~~~~~~~~  299 (366)
                      |+|++|+++++..+++.. .+++||+++++.+|+.|+++.+.+.+|...+            +...+. +.......+|+
T Consensus       226 ~i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  305 (355)
T PRK10217        226 WLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDA  305 (355)
T ss_pred             cCcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCH
Confidence            999999999999998875 4689999999999999999999998875321            111111 22334567899


Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          300 TLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       300 ~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      +|++++|||.|+++++++|+++++||+++..
T Consensus       306 ~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~~  336 (355)
T PRK10217        306 SKIARELGWLPQETFESGMRKTVQWYLANES  336 (355)
T ss_pred             HHHHHhcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence            9999999999999999999999999999864

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=8.5e-40  Score=305.69  Aligned_cols=293  Identities=16%  Similarity=0.168  Sum_probs=228.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----ccc-------ccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----MME-------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~~~-------~~~~v~~~~~D~~~~~~l   90 (366)
                      ++|+||||||+||||++|+++|+++|++         |++++|.....    ...       ...+++++.+|++|.+.+
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   75 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYE---------VHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSL   75 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCE---------EEEEecccccccccchhhhccccccccCceEEEEecCCCHHHH
Confidence            4678999999999999999999999999         99998764321    100       113468999999999999


Q ss_pred             Hhhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCc---eeEEEEecccccCCCCCCCCCcc
Q 044498           91 LRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS---LTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        91 ~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~---~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                      .++++  ++|+|||+|+..+. .....++...+++|+.++.++++++++.++++   .+|||+||.++||.... +  +.
T Consensus        76 ~~~~~~~~~d~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~--~~  151 (340)
T PLN02653         76 RRWLDDIKPDEVYNLAAQSHV-AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-P--QS  151 (340)
T ss_pred             HHHHHHcCCCEEEECCcccch-hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-C--CC
Confidence            88887  47999999997542 22334566678899999999999999887521   17999999999997654 3  25


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeC------C----CcHHHH----HHHHHhCCCCeE-EecCCcc
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG------E----KAPAAF----SRKAVTSTDNFE-MWGDGKQ  230 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r------~----~~~~~~----~~~~~~~~~~~~-i~~~~~~  230 (366)
                      |+.  +..|.+.|+.+|+++|.+++.++..++++++..|      +    ..+..+    +..+.. +.+.. +++++++
T Consensus       152 E~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~g~~  228 (340)
T PLN02653        152 ETT--PFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKV-GLQKKLFLGNLDA  228 (340)
T ss_pred             CCC--CCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHc-CCCCceEeCCCcc
Confidence            544  7789999999999999999999998887655442      1    122222    333333 44443 3488899


Q ss_pred             eeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCC--CCCCcCC---CCCCCcccccChHHHHHH
Q 044498          231 TRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEK--LPIHPIP---GPEGVRGRNSDDTLINEE  305 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~--~~~~~~~---~~~~~~~~~~~~~k~~~~  305 (366)
                      .++|+|++|+|++++.+++...++.||+++++++|+.|+++.+.+..|.+  ..+...+   .+........|++|++++
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  308 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREV  308 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHH
Confidence            99999999999999999988767899999999999999999999999864  2222222   123344557899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          306 LGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       306 lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      |||.|+++++++|+++++||++...
T Consensus       309 lgw~p~~~l~~gi~~~~~~~~~~~~  333 (340)
T PLN02653        309 LGWKPKVGFEQLVKMMVDEDLELAK  333 (340)
T ss_pred             hCCCCCCCHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999997654

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=3.3e-39  Score=309.73  Aligned_cols=300  Identities=16%  Similarity=0.138  Sum_probs=230.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----------------------cccccce
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----------------------EDMFCHE   78 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----------------------~~~~~v~   78 (366)
                      ++|+|||||||||||++|+++|+++|++         |+++++.......                       ....+++
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~---------V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  116 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYE---------VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE  116 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCe---------EEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce
Confidence            7789999999999999999999999999         9998753211100                       0012478


Q ss_pred             EEEccCCChhHHHhhhc--CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHcCC-CceeEEEEeccc
Q 044498           79 FHLVDLRVMDNCLRMTS--GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMNGV-MSLTFFFVSSAC  152 (366)
Q Consensus        79 ~~~~D~~~~~~l~~~~~--~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~~-~~~r~I~~SS~~  152 (366)
                      ++.+|++|.+.+.++++  ++|+|||+|+..... ....++   ...+++|+.++.+++++|+..++ .  +||++||..
T Consensus       117 ~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~-~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~--~~V~~SS~~  193 (442)
T PLN02572        117 LYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAP-YSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDC--HLVKLGTMG  193 (442)
T ss_pred             EEECCCCCHHHHHHHHHhCCCCEEEECCCcccCh-hhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCc--cEEEEecce
Confidence            99999999999999887  589999999865421 222222   34578999999999999999886 4  799999999


Q ss_pred             ccCCCCCCCC---Ccccc----cC---CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc---------------
Q 044498          153 IYPEFKQLDT---DVKES----EA---WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA---------------  207 (366)
Q Consensus       153 vyg~~~~~~~---~~~e~----~~---~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~---------------  207 (366)
                      +||.... +.   +++++    ++   .+..|.++|+.+|+++|.++..+++.++++++++|...               
T Consensus       194 vYG~~~~-~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~l  272 (442)
T PLN02572        194 EYGTPNI-DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEEL  272 (442)
T ss_pred             ecCCCCC-CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccc
Confidence            9996431 11   01111    11   25678899999999999999999999999999986321               


Q ss_pred             -------------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CC--CcEEecCCCcccHHHHH
Q 044498          208 -------------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FR--EPLNIGSDEMVSINEMA  270 (366)
Q Consensus       208 -------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~--~~~~i~~~~~~s~~el~  270 (366)
                                   +..++..+.. ++++.+++++.+.|+|+||+|++++++.+++..  .+  ++||+++ +.+|+.|++
T Consensus       273 i~~~~~~~~~~~~i~~~~~~~~~-g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~  350 (442)
T PLN02572        273 INRLDYDGVFGTALNRFCVQAAV-GHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELA  350 (442)
T ss_pred             ccccCcccchhhHHHHHHHHHhc-CCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHH
Confidence                         2234445554 677888899999999999999999999999764  23  4799976 679999999


Q ss_pred             HHHHHh---cCCCCCCCcCCCCCC---CcccccChHHHHHHcCCCCCC---CHHHHHHHHHHHHHHHHHHhhhcCC
Q 044498          271 EIILSF---ENEKLPIHPIPGPEG---VRGRNSDDTLINEELGWAPTM---KQKDELRITYFWIKEQVEKEKAQGI  337 (366)
Q Consensus       271 ~~i~~~---~g~~~~~~~~~~~~~---~~~~~~~~~k~~~~lG~~p~~---~~~e~l~~~~~~~~~~~~~~~~~~~  337 (366)
                      +.+.+.   +|.+..+...|.+..   ......|.+|++ +|||.|++   ++.++|.+++.||+++.....-.+.
T Consensus       351 ~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LGw~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  425 (442)
T PLN02572        351 KLVTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLC-ELGLEPHLLSDSLLDSLLNFAVKYKDRVDTTLILPA  425 (442)
T ss_pred             HHHHHHHHhhCCCCCeeeCCCCcccccccccCccHHHHH-HcCCCCCCcHHHHHHHHHHHHHHHHhhcchhhcccc
Confidence            999999   887766655554322   234567899996 59999999   9999999999999987765554443

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=2.6e-39  Score=325.74  Aligned_cols=292  Identities=18%  Similarity=0.207  Sum_probs=230.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccc-cccccceEEEccCCChhH-HHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMM-EDMFCHEFHLVDLRVMDN-CLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~-~~~~~v~~~~~D~~~~~~-l~~~~~~~d   98 (366)
                      .+|+|||||||||||++|+++|+++ |++         |++++|....... ....+++++.+|++|... +.++++++|
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~---------V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D  384 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYE---------VYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCD  384 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcE---------EEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCC
Confidence            6789999999999999999999985 799         9999987643221 112357899999998655 567788999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC----CC-C
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW----PA-E  173 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~----~~-~  173 (366)
                      +|||+|+..+.. ....++...+++|+.++.+++++|++.+ +  +|||+||.++||.....+  +.|+...    +. .
T Consensus       385 ~ViHlAa~~~~~-~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~--~~V~~SS~~vyg~~~~~~--~~E~~~~~~~~p~~~  458 (660)
T PRK08125        385 VVLPLVAIATPI-EYTRNPLRVFELDFEENLKIIRYCVKYN-K--RIIFPSTSEVYGMCTDKY--FDEDTSNLIVGPINK  458 (660)
T ss_pred             EEEECccccCch-hhccCHHHHHHhhHHHHHHHHHHHHhcC-C--eEEEEcchhhcCCCCCCC--cCccccccccCCCCC
Confidence            999999976532 2344566788999999999999999988 7  999999999999754443  2555421    22 3


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-------------------cHHHHHHHHHhCCCCeEEecCCcceeee
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-------------------APAAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                      |.+.|+.+|+++|+++..+++.++++++++|+.                   .+..++..+.. +.++.+++++.+.++|
T Consensus       459 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~-~~~i~~~g~g~~~rd~  537 (660)
T PRK08125        459 QRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLVDGGKQKRCF  537 (660)
T ss_pred             CccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcC-CCCeEEeCCCceeece
Confidence            567899999999999999998889999998632                   13345555555 6777888889999999


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC-cccHHHHHHHHHHhcCCCCCCCcCCCC----------------CCCc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE-MVSINEMAEIILSFENEKLPIHPIPGP----------------EGVR  293 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~----------------~~~~  293 (366)
                      +|++|++++++.++++.    .+++||+++++ .+|+.|+++.+.+.+|.+......|..                ....
T Consensus       538 i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (660)
T PRK08125        538 TDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVE  617 (660)
T ss_pred             eeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccccccccccccccccccc
Confidence            99999999999999864    36799999985 799999999999999854211111110                1223


Q ss_pred             ccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       294 ~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ....|++|++++|||.|+++++++|+++++|++++.
T Consensus       618 ~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~  653 (660)
T PRK08125        618 HRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTV  653 (660)
T ss_pred             ccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence            345799999999999999999999999999999875

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.3e-38  Score=299.15  Aligned_cols=297  Identities=19%  Similarity=0.240  Sum_probs=233.0

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------c----cccccceEEEccCCChh
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------M----EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~----~~~~~v~~~~~D~~~~~   88 (366)
                      ||.++++|||||||||||++|+++|+++|++         |++++|......      .    ....+++++.+|+++++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   71 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYK---------VVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE   71 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH
Confidence            3456689999999999999999999999999         999986532210      0    01234689999999999


Q ss_pred             HHHhhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccc
Q 044498           89 NCLRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        89 ~l~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                      .+..+++  ++|+|||+|+.... .....++...+..|+.++.++++++++.+++  +|||+||..+||.....+.  .|
T Consensus        72 ~l~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~vyg~~~~~~~--~E  146 (352)
T PLN02240         72 ALEKVFASTRFDAVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAKHGCK--KLVFSSSATVYGQPEEVPC--TE  146 (352)
T ss_pred             HHHHHHHhCCCCEEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEccHHHhCCCCCCCC--CC
Confidence            9988875  69999999996532 1233456678999999999999999999998  9999999999987554432  55


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHH-cCCcEEEeCCC--------------------cHHHHHHHHHhC-CCCeEE
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKD-FEIECRLVGEK--------------------APAAFSRKAVTS-TDNFEM  224 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~-~~~~~~i~r~~--------------------~~~~~~~~~~~~-~~~~~i  224 (366)
                      +.  +..|.+.|+.+|.++|++++.++.. .+++++++|..                    .+..++..+..+ ...+.+
T Consensus       147 ~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EF--PLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence            54  7788899999999999999988754 57888887721                    122344444432 234555


Q ss_pred             ec------CCcceeeeeeHHHHHHHHHHHHhc------CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-C
Q 044498          225 WG------DGKQTRSLTFIDECVEGVLRLIKS------DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-G  291 (366)
Q Consensus       225 ~~------~~~~~~~~i~v~D~a~~~~~~l~~------~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~  291 (366)
                      ++      ++.+.++|+|++|++++++.++..      ..+++||+++++++|+.|+++.+.+.+|.+.++...+.+. .
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~  304 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGD  304 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCCCC
Confidence            55      678899999999999999888753      1357999999999999999999999999877766555433 3


Q ss_pred             CcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 044498          292 VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK  331 (366)
Q Consensus       292 ~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~  331 (366)
                      ......|++|++++|||.|+++++++|+++++|++++...
T Consensus       305 ~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~~  344 (352)
T PLN02240        305 AEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPYG  344 (352)
T ss_pred             hhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCccc
Confidence            3345679999999999999999999999999999998643

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=8.6e-38  Score=293.57  Aligned_cols=292  Identities=19%  Similarity=0.290  Sum_probs=226.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc-cc---ccc--ccccceEEEccCCChhHHHhhhc--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN-EH---MME--DMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~-~~---~~~--~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      |||||||||||||++|+++|+++|++.        |+++++... ..   ...  ....++++.+|++|.+++.++++  
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~--------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   72 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDS--------VVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH   72 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCe--------EEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc
Confidence            589999999999999999999999751        555554321 11   100  12245789999999999999886  


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc---------CCCceeEEEEecccccCCCCCC------
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN---------GVMSLTFFFVSSACIYPEFKQL------  160 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~r~I~~SS~~vyg~~~~~------  160 (366)
                      ++|+|||+|+.... .....++..++++|+.++.+++++|++.         +++  +|||+||.++||.....      
T Consensus        73 ~~d~vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~--~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         73 QPDAVMHLAAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAF--RFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CCCEEEECCcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccce--eEEEecchhhcCCCCcccccccc
Confidence            58999999997542 1223456788999999999999999874         466  89999999999864211      


Q ss_pred             ---CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEec
Q 044498          161 ---DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ---~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~  226 (366)
                         | .+.|+  .+..|.+.|+.+|+++|.+++.+++.++++++++|..           .+..++..+.. +..+.+++
T Consensus       150 ~~~~-~~~E~--~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~-~~~~~~~~  225 (352)
T PRK10084        150 EELP-LFTET--TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE-GKPLPIYG  225 (352)
T ss_pred             ccCC-Ccccc--CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhc-CCCeEEeC
Confidence               1 12444  3778999999999999999999998889999888632           23445555554 56778888


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC--------cCC-CCCCCcccc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIH--------PIP-GPEGVRGRN  296 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~--------~~~-~~~~~~~~~  296 (366)
                      ++++.++|+|++|+++++..+++.. .+++||+++++.+|+.|+++.+.+.+|...+..        ..+ .+.......
T Consensus       226 ~g~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  305 (352)
T PRK10084        226 KGDQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYA  305 (352)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceee
Confidence            9999999999999999999988765 478999999999999999999999998532211        111 122233446


Q ss_pred             cChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          297 SDDTLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       297 ~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      +|++|++++|||.|+++++++|+++++|++++..
T Consensus       306 ~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~  339 (352)
T PRK10084        306 IDASKISRELGWKPQETFESGIRKTVEWYLANTE  339 (352)
T ss_pred             eCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCHH
Confidence            8999999999999999999999999999999754

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=9.7e-39  Score=273.12  Aligned_cols=289  Identities=23%  Similarity=0.297  Sum_probs=237.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCC----ccc--cccccccceEEEccCCChhHHHhhhc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNK----NEH--MMEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~----~~~--~~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||.||||++.+..+...  .++         ++.++...    ...  ......+..++.+|+.+...+..++.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~---------~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~   77 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYK---------FVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFE   77 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCc---------EEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhc
Confidence            78999999999999999998875  344         55444211    111  11123456899999999988887764


Q ss_pred             --CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498           96 --GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                        .+|.|||+|+.++.. .+..++......|+.++..|+++++.. +++  +|||+||..|||+....-   .+.|...+
T Consensus        78 ~~~id~vihfaa~t~vd-~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~--~fvhvSTdeVYGds~~~~---~~~E~s~~  151 (331)
T KOG0747|consen   78 TEEIDTVIHFAAQTHVD-RSFGDSFEFTKNNILSTHVLLEAVRVSGNIR--RFVHVSTDEVYGDSDEDA---VVGEASLL  151 (331)
T ss_pred             cCchhhhhhhHhhhhhh-hhcCchHHHhcCCchhhhhHHHHHHhccCee--EEEEecccceecCccccc---cccccccC
Confidence              699999999988743 455677788899999999999999999 588  999999999999987654   22244588


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                      .|.++|+.+|+++|..++.|...++++++++|.+           .++.|+..+.. +.+.++.|++.+.|+|+|++|++
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~-~~~~~i~g~g~~~rs~l~veD~~  230 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMR-GKEYPIHGDGLQTRSYLYVEDVS  230 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHh-CCCcceecCcccceeeEeHHHHH
Confidence            9999999999999999999999999999999743           34666665555 78899999999999999999999


Q ss_pred             HHHHHHHhcCC-CCcEEecCCCcccHHHHHHHHHHhcCCCCC-------CCcCCC-CCCCcccccChHHHHHHcCCCCCC
Q 044498          242 EGVLRLIKSDF-REPLNIGSDEMVSINEMAEIILSFENEKLP-------IHPIPG-PEGVRGRNSDDTLINEELGWAPTM  312 (366)
Q Consensus       242 ~~~~~~l~~~~-~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-------~~~~~~-~~~~~~~~~~~~k~~~~lG~~p~~  312 (366)
                      +++..+++... +++||+++..+.+..|+++.|.+.+....+       +...+. |....++.++.+|++ .|||+|++
T Consensus       231 ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik-~LGw~~~~  309 (331)
T KOG0747|consen  231 EAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIK-KLGWRPTT  309 (331)
T ss_pred             HHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHH-hcCCcccC
Confidence            99999998875 999999999999999999999988876422       222332 345666789999998 89999999


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 044498          313 KQKDELRITYFWIKEQV  329 (366)
Q Consensus       313 ~~~e~l~~~~~~~~~~~  329 (366)
                      ++++||+.+++||.++.
T Consensus       310 p~~eGLrktie~y~~~~  326 (331)
T KOG0747|consen  310 PWEEGLRKTIEWYTKNF  326 (331)
T ss_pred             cHHHHHHHHHHHHHhhh
Confidence            99999999999999986

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.1e-37  Score=292.32  Aligned_cols=294  Identities=18%  Similarity=0.153  Sum_probs=228.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++|+|||||||||||+++++.|+++|++         |++++|........     ....+.++.+|+++.+.+.++++ 
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAE---------VYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCE---------EEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh
Confidence            4689999999999999999999999999         99999876532211     11246789999999999998887 


Q ss_pred             -CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                       ++|+|||+|+... ......++...+++|+.++.+++++++..+ ++  +||++||..+||..... .++.|+.  +..
T Consensus        74 ~~~d~vih~A~~~~-~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~--~iv~~SS~~vyg~~~~~-~~~~e~~--~~~  147 (349)
T TIGR02622        74 FKPEIVFHLAAQPL-VRKSYADPLETFETNVMGTVNLLEAIRAIGSVK--AVVNVTSDKCYRNDEWV-WGYRETD--PLG  147 (349)
T ss_pred             cCCCEEEECCcccc-cccchhCHHHHHHHhHHHHHHHHHHHHhcCCCC--EEEEEechhhhCCCCCC-CCCccCC--CCC
Confidence             4799999999653 223445667789999999999999999877 77  99999999999865321 1124443  667


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHc-------CCcEEEeCCC------------cHHHHHHHHHhCCCCeEEecCCcceeee
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDF-------EIECRLVGEK------------APAAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~-------~~~~~i~r~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                      |.++|+.+|.+.|.+++.++..+       +++++++|+.            .++.++..+.. +.++.+ +++.+.++|
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~-g~~~~~-~~g~~~rd~  225 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSS-NKIVII-RNPDATRPW  225 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhc-CCCeEE-CCCCcccce
Confidence            89999999999999999887764       8899998632            23445555554 666665 578899999


Q ss_pred             eeHHHHHHHHHHHHhc------CCCCcEEecCC--CcccHHHHHHHHHHhcC-CCCCCCcCC--CC-CCCcccccChHHH
Q 044498          235 TFIDECVEGVLRLIKS------DFREPLNIGSD--EMVSINEMAEIILSFEN-EKLPIHPIP--GP-EGVRGRNSDDTLI  302 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~------~~~~~~~i~~~--~~~s~~el~~~i~~~~g-~~~~~~~~~--~~-~~~~~~~~~~~k~  302 (366)
                      +|++|++++++.+++.      ..+++||++++  +++++.++++.+.+.++ .+..+...+  .. ........|.+|+
T Consensus       226 i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  305 (349)
T TIGR02622       226 QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKA  305 (349)
T ss_pred             eeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHH
Confidence            9999999999988764      12579999975  69999999999988765 333333221  11 2234456899999


Q ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 044498          303 NEELGWAPTMKQKDELRITYFWIKEQVEKE  332 (366)
Q Consensus       303 ~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~  332 (366)
                      +++|||.|+++++++|+++++|++++...+
T Consensus       306 ~~~lgw~p~~~l~~gi~~~i~w~~~~~~~~  335 (349)
T TIGR02622       306 RTLLGWHPRWGLEEAVSRTVDWYKAWLRGE  335 (349)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999875443

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.2e-37  Score=290.97  Aligned_cols=291  Identities=18%  Similarity=0.222  Sum_probs=226.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      |+|||||||||||++++++|+++|++         |++++|.......       .....+.++.+|++|.+.+.++++ 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   71 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHD---------VVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD   71 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCe---------EEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc
Confidence            58999999999999999999999999         9998764321110       011235788999999999988876 


Q ss_pred             -CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCC-C
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA-E  173 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~-~  173 (366)
                       ++|+|||+|+..... .........+..|+.++.++++++++.+++  +||++||.++||.....+  +.|+.  +. .
T Consensus        72 ~~~d~vvh~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~yg~~~~~~--~~E~~--~~~~  144 (338)
T PRK10675         72 HAIDTVIHFAGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVK--NLIFSSSATVYGDQPKIP--YVESF--PTGT  144 (338)
T ss_pred             CCCCEEEECCcccccc-chhhCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEeccHHhhCCCCCCc--ccccc--CCCC
Confidence             699999999975421 122345667899999999999999999999  999999999998654433  25554  44 6


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCC--------------------cHHHHHHHHHhCC-CCeEEec-----
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDF-EIECRLVGEK--------------------APAAFSRKAVTST-DNFEMWG-----  226 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~--------------------~~~~~~~~~~~~~-~~~~i~~-----  226 (366)
                      |.+.|+.+|.++|++++.+++.. +++++++|..                    .+..++.++..+. ..+.+++     
T Consensus       145 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        145 PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             CCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            78999999999999999987664 7888888621                    0122334444322 3355554     


Q ss_pred             -CCcceeeeeeHHHHHHHHHHHHhc----CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChH
Q 044498          227 -DGKQTRSLTFIDECVEGVLRLIKS----DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDT  300 (366)
Q Consensus       227 -~~~~~~~~i~v~D~a~~~~~~l~~----~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~  300 (366)
                       ++.+.++|+|++|+|++++.+++.    ..+++||+++++.+|+.|+++.+.+..|.+.++...|.. ........|++
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  304 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADAS  304 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCchhhhhcCHH
Confidence             567889999999999999998874    235799999999999999999999999987666555432 23455678999


Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          301 LINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       301 k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      |++++|||.|+++++++|+++++|++++..
T Consensus       305 k~~~~lg~~p~~~~~~~~~~~~~~~~~~~~  334 (338)
T PRK10675        305 KADRELNWRVTRTLDEMAQDTWHWQSRHPQ  334 (338)
T ss_pred             HHHHHhCCCCcCcHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999998743

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.1e-37  Score=313.43  Aligned_cols=294  Identities=21%  Similarity=0.255  Sum_probs=233.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccc----c--ccccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEH----M--MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~----~--~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+|+|||||||||||++|+++|+++  +++         |+++++.....    .  .....+++++.+|++|.+.+.++
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~---------V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~   75 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYK---------IVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYL   75 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCE---------EEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHH
Confidence            4579999999999999999999998  577         99888743110    0  01123578999999999888776


Q ss_pred             h--cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           94 T--SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        94 ~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      +  .++|+|||+|+..... ....++..+++.|+.++.++++++++.+ ++  ||||+||..+||.....+. ....++.
T Consensus        76 ~~~~~~D~ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vk--r~I~~SS~~vyg~~~~~~~-~~~~E~~  151 (668)
T PLN02260         76 LITEGIDTIMHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--RFIHVSTDEVYGETDEDAD-VGNHEAS  151 (668)
T ss_pred             HhhcCCCEEEECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEEcchHHhCCCccccc-cCccccC
Confidence            5  5899999999976421 2233556778999999999999999987 88  9999999999997654321 1123334


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                      +..|.++|+.+|.++|+++..+.+.++++++++|+.           .+..++..+.. +.++.+++++.+.++|+|++|
T Consensus       152 ~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~-g~~i~i~g~g~~~r~~ihV~D  230 (668)
T PLN02260        152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQ-GKPLPIHGDGSNVRSYLYCED  230 (668)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhC-CCCeEEecCCCceEeeEEHHH
Confidence            667889999999999999999998889999999742           23445555554 678888899999999999999


Q ss_pred             HHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC--CCcCCC-CCCCcccccChHHHHHHcCCCCCCCHH
Q 044498          240 CVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP--IHPIPG-PEGVRGRNSDDTLINEELGWAPTMKQK  315 (366)
Q Consensus       240 ~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~-~~~~~~~~~~~~k~~~~lG~~p~~~~~  315 (366)
                      +|+++..+++.. .+++||+++++.+++.|+++.+.+.+|.+..  +...+. +.......+|++|++ +|||.|+++++
T Consensus       231 va~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~-~lGw~p~~~~~  309 (668)
T PLN02260        231 VAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLK-KLGWQERTSWE  309 (668)
T ss_pred             HHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHH-HcCCCCCCCHH
Confidence            999999998765 5789999999999999999999999997643  222222 233344568999996 69999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 044498          316 DELRITYFWIKEQVE  330 (366)
Q Consensus       316 e~l~~~~~~~~~~~~  330 (366)
                      |+|+++++||+++..
T Consensus       310 egl~~~i~w~~~~~~  324 (668)
T PLN02260        310 EGLKKTMEWYTSNPD  324 (668)
T ss_pred             HHHHHHHHHHHhChh
Confidence            999999999999765

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=7.3e-37  Score=282.82  Aligned_cols=290  Identities=23%  Similarity=0.339  Sum_probs=228.1

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcc----ccc--cccccceEEEccCCChhHHHhhhcC
Q 044498           25 RISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNE----HMM--EDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~----~~~--~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      +||||||||+||++++++|++.|  ++         |++++|....    ...  ....+++++.+|+++++.+.+++++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   71 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAE---------VIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTE   71 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCE---------EEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhh
Confidence            59999999999999999999987  67         8888764211    001  0112568899999999999998886


Q ss_pred             --CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           97 --VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        97 --~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                        +|+|||+|+.... .....++..++.+|+.++.++++++.+.+.+ .++|++||..+||...... ++.|+.  +..|
T Consensus        72 ~~~d~vi~~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~Ss~~v~g~~~~~~-~~~e~~--~~~~  146 (317)
T TIGR01181        72 HQPDAVVHFAAESHV-DRSISGPAAFIETNVVGTYTLLEAVRKYWHE-FRFHHISTDEVYGDLEKGD-AFTETT--PLAP  146 (317)
T ss_pred             cCCCEEEEcccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-ceEEEeeccceeCCCCCCC-CcCCCC--CCCC
Confidence              9999999996542 1233456677899999999999999987432 2799999999999754431 124443  6678


Q ss_pred             CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      .+.|+.+|..+|.+++.++...+++++++|+.           .+..++..+.. +.++.+++++++.++|+|++|++++
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~D~a~~  225 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALA-GKPLPVYGDGQQVRDWLYVEDHCRA  225 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhc-CCCceEeCCCceEEeeEEHHHHHHH
Confidence            89999999999999999988889999999643           23445555555 5677788888899999999999999


Q ss_pred             HHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCC-CcCC-CCCCCcccccChHHHHHHcCCCCCCCHHHHHHH
Q 044498          244 VLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPI-HPIP-GPEGVRGRNSDDTLINEELGWAPTMKQKDELRI  320 (366)
Q Consensus       244 ~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~-~~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~  320 (366)
                      +..+++.. .+++||+++++.+++.|+++.+.+.+|.+... ...+ .+........|++|++++|||.|++++++++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~  305 (317)
T TIGR01181       226 IYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRK  305 (317)
T ss_pred             HHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHH
Confidence            99999765 46899999999999999999999999975332 2222 122233346899999999999999999999999


Q ss_pred             HHHHHHHHH
Q 044498          321 TYFWIKEQV  329 (366)
Q Consensus       321 ~~~~~~~~~  329 (366)
                      +++||+++.
T Consensus       306 ~~~~~~~~~  314 (317)
T TIGR01181       306 TVQWYLDNE  314 (317)
T ss_pred             HHHHHHhcc
Confidence            999998864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=3.8e-37  Score=283.62  Aligned_cols=278  Identities=24%  Similarity=0.371  Sum_probs=220.6

Q ss_pred             EEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEEEcc
Q 044498           27 SSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMSNLA  104 (366)
Q Consensus        27 lItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi~~a  104 (366)
                      ||||||||||++|++.|++.|++         |+++.+.              ..+|+++.+++.++++  ++|+|||||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~---------v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFT---------NLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCc---------EEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            69999999999999999999998         7765422              2589999999998876  589999999


Q ss_pred             cccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC--CCCCCCC-chHHH
Q 044498          105 ADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA--WPAEPQD-AYGLE  181 (366)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~--~~~~p~~-~Y~~s  181 (366)
                      +..+.......++..+++.|+.++.+|+++|++.+++  +|||+||..|||.....+.  +|+..  .+..|.+ .|+.+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~i~~SS~~vyg~~~~~~~--~E~~~~~~~~~p~~~~Y~~s  133 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVK--KLLFLGSSCIYPKFAPQPI--PETALLTGPPEPTNEWYAIA  133 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC--eEEEeCceeecCCCCCCCC--CHHHhccCCCCCCcchHHHH
Confidence            9754222334566778999999999999999999998  9999999999997654443  66542  1444544 59999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHH---HhCCCCeEE-ecCCcceeeeeeHHHHHH
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKA---VTSTDNFEM-WGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~---~~~~~~~~i-~~~~~~~~~~i~v~D~a~  242 (366)
                      |.++|++++.+.+.++++++++|+.               .+..++..+   ...+.++.+ ++++.+.++|+|++|+++
T Consensus       134 K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~  213 (306)
T PLN02725        134 KIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLAD  213 (306)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHH
Confidence            9999999999988889999998632               122333332   122455554 688889999999999999


Q ss_pred             HHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChHHHHHHcCCCCCCCHHHHHHH
Q 044498          243 GVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDTLINEELGWAPTMKQKDELRI  320 (366)
Q Consensus       243 ~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~  320 (366)
                      +++.+++.. ..+.||+++++.+|+.|+++.+.+.+|.+..+...+.+ .......+|++|++ .|||.|+++++++|++
T Consensus       214 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~  292 (306)
T PLN02725        214 AVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLR-SLGWDPKFSLKDGLQE  292 (306)
T ss_pred             HHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHH-HhCCCCCCCHHHHHHH
Confidence            999999764 46789999999999999999999999976655544332 23445678999996 5999999999999999


Q ss_pred             HHHHHHHHHHHh
Q 044498          321 TYFWIKEQVEKE  332 (366)
Q Consensus       321 ~~~~~~~~~~~~  332 (366)
                      +++|++++.++.
T Consensus       293 ~~~~~~~~~~~~  304 (306)
T PLN02725        293 TYKWYLENYETG  304 (306)
T ss_pred             HHHHHHhhhhcc
Confidence            999999998654

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.6e-37  Score=272.01  Aligned_cols=292  Identities=19%  Similarity=0.231  Sum_probs=242.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChhHHHhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .++||||||.||||+|.+.+|+++|+.         |+++++..+...         .....++.++.+|++|.+.|+++
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~---------v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kv   72 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYG---------VVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKL   72 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCc---------EEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHH
Confidence            468999999999999999999999999         999997655322         11235789999999999999999


Q ss_pred             hc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           94 TS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        94 ~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      ++  .+|.|+|+|+.... +.+..++..+...|+.++.+|++.+++++++  .+||.||+.+||.....|+  +|+.  +
T Consensus        73 F~~~~fd~V~Hfa~~~~v-geS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~--~~V~sssatvYG~p~~ip~--te~~--~  145 (343)
T KOG1371|consen   73 FSEVKFDAVMHFAALAAV-GESMENPLSYYHNNIAGTLNLLEVMKAHNVK--ALVFSSSATVYGLPTKVPI--TEED--P  145 (343)
T ss_pred             HhhcCCceEEeehhhhcc-chhhhCchhheehhhhhHHHHHHHHHHcCCc--eEEEecceeeecCcceeec--cCcC--C
Confidence            87  69999999998763 4667788899999999999999999999998  9999999999999988765  7776  4


Q ss_pred             CC-CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC-----------------CcHHHHH---HH-HHhCCCCeEEe----
Q 044498          172 AE-PQDAYGLEKLATEGLCKHYTKDFEIECRLVGE-----------------KAPAAFS---RK-AVTSTDNFEMW----  225 (366)
Q Consensus       172 ~~-p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-----------------~~~~~~~---~~-~~~~~~~~~i~----  225 (366)
                      .. |.++||.+|...|.++..+.+.+++.++.+|.                 ....+++   .+ ++.+.....+.    
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~  225 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDY  225 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcc
Confidence            44 99999999999999999999988877777741                 1111111   11 22222222222    


Q ss_pred             --cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccC
Q 044498          226 --GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSD  298 (366)
Q Consensus       226 --~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~  298 (366)
                        .+++..++|+|+-|+|+..+.+++..    .-++||++.+...++.+|+..+.+..|.+.++...+.+. +....+.+
T Consensus       226 ~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~  305 (343)
T KOG1371|consen  226 TTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYAN  305 (343)
T ss_pred             cccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeC
Confidence              35578899999999999999999774    346999999999999999999999999999998888764 45667899


Q ss_pred             hHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          299 DTLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       299 ~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      .+++.++|||+|.+.++++++++++|..+++.
T Consensus       306 ~~~a~~elgwk~~~~iee~c~dlw~W~~~np~  337 (343)
T KOG1371|consen  306 PSKAQRELGWKAKYGLQEMLKDLWRWQKQNPS  337 (343)
T ss_pred             hHHHHHHhCCccccCHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=8.8e-37  Score=285.08  Aligned_cols=289  Identities=16%  Similarity=0.138  Sum_probs=214.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------c-ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------E-DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~-~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+||||++|+++|+++|++         |+++.|.......      . ....++++.+|++|.+.+.+++
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYA---------VNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPI   78 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCE---------EEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHH
Confidence            5789999999999999999999999999         9888876532110      0 1114688999999999999999


Q ss_pred             cCCCEEEEcccccCCccccccCc-chhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCCCC--CCCCcccccC-
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNH-SVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEFKQ--LDTDVKESEA-  169 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~~~--~~~~~~e~~~-  169 (366)
                      +++|+|||+|+...   ....++ ...+++|+.++.++++++.+. +++  ||||+||.++||....  ...++.|+.+ 
T Consensus        79 ~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~--~~v~~SS~~~~g~~~~~~~~~~~~E~~~~  153 (338)
T PLN00198         79 AGCDLVFHVATPVN---FASEDPENDMIKPAIQGVHNVLKACAKAKSVK--RVILTSSAAAVSINKLSGTGLVMNEKNWT  153 (338)
T ss_pred             hcCCEEEEeCCCCc---cCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc--EEEEeecceeeeccCCCCCCceeccccCC
Confidence            99999999999642   222233 345789999999999999886 588  9999999999985421  1111233321 


Q ss_pred             ------CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH---------HH---HHHHHHhCCCCeEEec-CCcc
Q 044498          170 ------WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP---------AA---FSRKAVTSTDNFEMWG-DGKQ  230 (366)
Q Consensus       170 ------~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~---------~~---~~~~~~~~~~~~~i~~-~~~~  230 (366)
                            .+..|.++|+.+|.++|.++..+++.++++++++|+..+         ..   ++..++. +..+.+.+ .+.+
T Consensus       154 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~  232 (338)
T PLN00198        154 DVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLIT-GNEFLINGLKGMQ  232 (338)
T ss_pred             chhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHc-CCccccccccccc
Confidence                  134578889999999999999999989999999864321         11   2233444 45555544 2222


Q ss_pred             ----eeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCC-CCCCCcCCCCCCCcccccChHHHHH
Q 044498          231 ----TRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENE-KLPIHPIPGPEGVRGRNSDDTLINE  304 (366)
Q Consensus       231 ----~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~k~~~  304 (366)
                          .++|+|++|++++++.+++.+ .++.| ++++..+++.|+++.+.+.++. +.+..+.+.+ .......|.+|+++
T Consensus       233 ~~~~~~~~i~V~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~k~~~  310 (338)
T PLN00198        233 MLSGSISITHVEDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQVPTDFGDFP-SKAKLIISSEKLIS  310 (338)
T ss_pred             cccCCcceeEHHHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCCCCccccccC-CCCccccChHHHHh
Confidence                379999999999999999875 34678 4556789999999999988863 2332222222 23345689999977


Q ss_pred             HcCCCCCCCHHHHHHHHHHHHHHH
Q 044498          305 ELGWAPTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       305 ~lG~~p~~~~~e~l~~~~~~~~~~  328 (366)
                       +||.|+++++++|+++++||+++
T Consensus       311 -~G~~p~~~l~~gi~~~~~~~~~~  333 (338)
T PLN00198        311 -EGFSFEYGIEEIYDQTVEYFKAK  333 (338)
T ss_pred             -CCceecCcHHHHHHHHHHHHHHc
Confidence             69999999999999999999974

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.6e-36  Score=283.26  Aligned_cols=282  Identities=15%  Similarity=0.106  Sum_probs=216.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++|+|||||||||||++++++|+++|++         |+++.|......       ......++++.+|+++.+.+.+++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   79 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYT---------VKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI   79 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCE---------EEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence            4678999999999999999999999999         999988754311       001124678999999999999999


Q ss_pred             cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc-cccCCCCCCC-CCcccccC---
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA-CIYPEFKQLD-TDVKESEA---  169 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~-~vyg~~~~~~-~~~~e~~~---  169 (366)
                      +++|+|||+|+..      ..++...++.|+.++.+++++|++.+++  ||||+||. ++||.....+ ..+.|+.+   
T Consensus        80 ~~~d~Vih~A~~~------~~~~~~~~~~nv~gt~~ll~aa~~~~v~--r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~  151 (342)
T PLN02214         80 DGCDGVFHTASPV------TDDPEQMVEPAVNGAKFVINAAAEAKVK--RVVITSSIGAVYMDPNRDPEAVVDESCWSDL  151 (342)
T ss_pred             hcCCEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEeccceeeeccCCCCCCcccCcccCCCh
Confidence            9999999999954      2456778999999999999999999999  99999996 6897543322 12355432   


Q ss_pred             -CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH-------------HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          170 -WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP-------------AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       170 -~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~-------------~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                       .+..|.+.|+.+|.++|+++..++++++++++++|+..+             ..++ .++. +... .++  .+.++|+
T Consensus       152 ~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~-g~~~-~~~--~~~~~~i  226 (342)
T PLN02214        152 DFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLT-GSAK-TYA--NLTQAYV  226 (342)
T ss_pred             hhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHc-CCcc-cCC--CCCcCee
Confidence             133477899999999999999999988999999964321             1122 2333 3322 223  4578999


Q ss_pred             eHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCC-CCCCCcCCC-CCCCcccccChHHHHHHcCCCCCC
Q 044498          236 FIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENE-KLPIHPIPG-PEGVRGRNSDDTLINEELGWAPTM  312 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~-~~~~~~~~~~~~k~~~~lG~~p~~  312 (366)
                      |++|+|++++.+++++ .++.||+++ ...++.|+++.|.+.++. +.+....+. +.......+|++|++ +|||+| +
T Consensus       227 ~V~Dva~a~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~LG~~p-~  303 (342)
T PLN02214        227 DVRDVALAHVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIK-DLGLEF-T  303 (342)
T ss_pred             EHHHHHHHHHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHH-HcCCcc-c
Confidence            9999999999999875 467999986 578999999999999863 222222221 223344568999997 599999 5


Q ss_pred             CHHHHHHHHHHHHHHH
Q 044498          313 KQKDELRITYFWIKEQ  328 (366)
Q Consensus       313 ~~~e~l~~~~~~~~~~  328 (366)
                      +++|+|+++++|+++.
T Consensus       304 ~lee~i~~~~~~~~~~  319 (342)
T PLN02214        304 STKQSLYDTVKSLQEK  319 (342)
T ss_pred             CHHHHHHHHHHHHHHc
Confidence            9999999999999875

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.5e-36  Score=278.02  Aligned_cols=291  Identities=27%  Similarity=0.376  Sum_probs=234.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCC-CEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGV-DNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~-d~vi~  102 (366)
                      |+|||||||||||++|+++|+++|++         |++++|......... .++.++.+|+++.+.+.+...++ |+|||
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih   70 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHD---------VRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIH   70 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCe---------EEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEE
Confidence            35999999999999999999999999         999998776544333 55689999999998888877877 99999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+..........++..++..|+.++.+++++|++.+++  +|||+||.++|+.. ....++.|+. .+..|.++|+.+|
T Consensus        71 ~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~--~~v~~ss~~~~~~~-~~~~~~~E~~-~~~~p~~~Yg~sK  146 (314)
T COG0451          71 LAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVK--RFVFASSVSVVYGD-PPPLPIDEDL-GPPRPLNPYGVSK  146 (314)
T ss_pred             ccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEeCCCceECCC-CCCCCccccc-CCCCCCCHHHHHH
Confidence            999876432211134568999999999999999999999  99999998888766 2221246664 5777888999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCC--------------cHHHHHHHHHhCCCC-eEEecCCcceeeeeeHHHHHHHHHHH
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEK--------------APAAFSRKAVTSTDN-FEMWGDGKQTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~--------------~~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~  247 (366)
                      +++|..+..+...++++++++|+.              ....++..+.. +.+ ..+.+++...++++|++|+++++..+
T Consensus       147 ~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  225 (314)
T COG0451         147 LAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLK-GEPIIVIGGDGSQTRDFVYVDDVADALLLA  225 (314)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHh-CCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence            999999999998888999999632              22223333444 444 56667778889999999999999999


Q ss_pred             HhcCCCCcEEecCCC-cccHHHHHHHHHHhcCCCCC-CCcCC---CCCCCcccccChHHHHHHcCCCCCCCHHHHHHHHH
Q 044498          248 IKSDFREPLNIGSDE-MVSINEMAEIILSFENEKLP-IHPIP---GPEGVRGRNSDDTLINEELGWAPTMKQKDELRITY  322 (366)
Q Consensus       248 l~~~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~-~~~~~---~~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~  322 (366)
                      ++++....||+++++ .+++.|+++.+.+.+|.... +...+   ..........|.+|++++|||.|++++++++.+++
T Consensus       226 ~~~~~~~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~  305 (314)
T COG0451         226 LENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTL  305 (314)
T ss_pred             HhCCCCcEEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence            998744499999997 89999999999999998766 34433   22334456789999999999999999999999999


Q ss_pred             HHHHHHH
Q 044498          323 FWIKEQV  329 (366)
Q Consensus       323 ~~~~~~~  329 (366)
                      +|+....
T Consensus       306 ~~~~~~~  312 (314)
T COG0451         306 EWLLKKL  312 (314)
T ss_pred             HHHHHhh
Confidence            9998764

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=1.6e-36  Score=284.77  Aligned_cols=290  Identities=14%  Similarity=0.091  Sum_probs=211.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------c--ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------E--DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~--~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.++|||||||||||++|+++|+++|++         |++++|.......      .  ....++++.+|+++.+.+.++
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~   74 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYT---------VRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDA   74 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCE---------EEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHH
Confidence            5678999999999999999999999999         9998876533211      0  012367899999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCc-chhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccC--
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNH-SVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEA--  169 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~--  169 (366)
                      ++++|+|||+|+...   ....++ ...+++|+.++.++++++.+.+ ++  ||||+||.++|+........+.|+..  
T Consensus        75 ~~~~d~ViH~A~~~~---~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~--r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         75 IRGCTGVFHVATPMD---FESKDPENEVIKPTVNGMLSIMKACAKAKTVR--RIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             HhCCCEEEEeCCCCC---CCCCCchhhhhhHHHHHHHHHHHHHHhcCCce--EEEEecchhhcccCCCCCCccCcccCCc
Confidence            999999999998653   122233 3678999999999999999987 78  99999999777653221111234321  


Q ss_pred             -----CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH----------HHHHHHHH-hCCCCeEEecCCcceee
Q 044498          170 -----WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP----------AAFSRKAV-TSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       170 -----~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~----------~~~~~~~~-~~~~~~~i~~~~~~~~~  233 (366)
                           .+..|.++|+.+|.++|.++..+++.++++++++|+..+          ..++..+. ..+... .++. .+.++
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~r~  227 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYSI-IKQGQ  227 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccCc-CCCcc
Confidence                 122355789999999999999999999999999975321          22332221 112221 1222 23479


Q ss_pred             eeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCC-CCCCcCCCCCCCcccccChHHHHHHcCCCCC
Q 044498          234 LTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPIPGPEGVRGRNSDDTLINEELGWAPT  311 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~  311 (366)
                      |+|++|+|++++.+++.+ .++.| +++++.+|+.|+++.|.+..+.. .+......+........|.+|+ ++|||.|+
T Consensus       228 ~v~V~Dva~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lG~~p~  305 (351)
T PLN02650        228 FVHLDDLCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKL-TDLGFTFK  305 (351)
T ss_pred             eeeHHHHHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHH-HHhCCCCC
Confidence            999999999999999875 35678 56678899999999999987632 2211111122334445688887 57999999


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 044498          312 MKQKDELRITYFWIKEQV  329 (366)
Q Consensus       312 ~~~~e~l~~~~~~~~~~~  329 (366)
                      ++++++|+++++||+++.
T Consensus       306 ~~l~egl~~~i~~~~~~~  323 (351)
T PLN02650        306 YSLEDMFDGAIETCREKG  323 (351)
T ss_pred             CCHHHHHHHHHHHHHHcC
Confidence            999999999999998754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=2.2e-36  Score=278.85  Aligned_cols=275  Identities=16%  Similarity=0.211  Sum_probs=204.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh---hH-HHhhh-----cC
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM---DN-CLRMT-----SG   96 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~---~~-l~~~~-----~~   96 (366)
                      |||||||||||++|+++|++.|++         ++++.+........    ..+..+|+.|.   +. +.+++     .+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~---------~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGIT---------DILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCc---------eEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            899999999999999999999997         66655443221110    12334555554   33 23333     26


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQD  176 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~  176 (366)
                      +|+|||+|+..+..   ..++...++.|+.++.+|+++|++.++   +|||+||.++||.....+  ..|+.  +..|.+
T Consensus        69 ~d~Vih~A~~~~~~---~~~~~~~~~~n~~~t~~ll~~~~~~~~---~~i~~SS~~vyg~~~~~~--~~E~~--~~~p~~  138 (308)
T PRK11150         69 IEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRTDDF--IEERE--YEKPLN  138 (308)
T ss_pred             ccEEEECceecCCc---CCChHHHHHHHHHHHHHHHHHHHHcCC---cEEEEcchHHhCcCCCCC--CccCC--CCCCCC
Confidence            99999999965421   224456789999999999999999886   699999999999764433  24443  677889


Q ss_pred             chHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cH----HHHHHHHHhCCCCeEEe-cCCcceeeeeeHHHH
Q 044498          177 AYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------AP----AAFSRKAVTSTDNFEMW-GDGKQTRSLTFIDEC  240 (366)
Q Consensus       177 ~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~----~~~~~~~~~~~~~~~i~-~~~~~~~~~i~v~D~  240 (366)
                      .|+.+|.++|++++.++...+++++++|..           .+    ..++..+.+ +....++ ++++..++|+|++|+
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~g~~~~~r~~i~v~D~  217 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNN-GENPKLFEGSENFKRDFVYVGDV  217 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhc-CCCCEEecCCCceeeeeeeHHHH
Confidence            999999999999999988889999998632           11    123344554 4444444 566778999999999


Q ss_pred             HHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCC-----CcccccChHHHHHHcCCCCC-CCH
Q 044498          241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-----VRGRNSDDTLINEELGWAPT-MKQ  314 (366)
Q Consensus       241 a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~~~~k~~~~lG~~p~-~~~  314 (366)
                      +++++.+++...+++||+++++.+|+.|+++.+.+.+|.. ++...+.+..     ......|++|+++ +||+|+ .++
T Consensus       218 a~a~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~-~g~~p~~~~~  295 (308)
T PRK11150        218 AAVNLWFWENGVSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGRYQAFTQADLTKLRA-AGYDKPFKTV  295 (308)
T ss_pred             HHHHHHHHhcCCCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccccccccceecccCHHHHHh-cCCCCCCCCH
Confidence            9999999987767899999999999999999999999853 2233332321     1224689999985 799987 599


Q ss_pred             HHHHHHHHHHHH
Q 044498          315 KDELRITYFWIK  326 (366)
Q Consensus       315 ~e~l~~~~~~~~  326 (366)
                      +++|+++++|+.
T Consensus       296 ~~gl~~~~~~~~  307 (308)
T PRK11150        296 AEGVAEYMAWLN  307 (308)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999975

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.7e-35  Score=275.06  Aligned_cols=285  Identities=15%  Similarity=0.115  Sum_probs=213.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .++|+||||||+||||++++++|+++|++         |+++.|+......        .....++++.+|+++.+.+.+
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   73 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGYT---------INATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFEL   73 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCE---------EEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHH
Confidence            35689999999999999999999999999         9888776543211        011246889999999999999


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCCCC---CCCCccccc
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEFKQ---LDTDVKESE  168 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~~~---~~~~~~e~~  168 (366)
                      +++++|+|||+|+.... .....+....++.|+.++.++++++.+. +++  +||++||.++|+....   ...+++|+.
T Consensus        74 ~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~--~iv~~SS~~~~~~~~~~~~~~~~~~E~~  150 (325)
T PLN02989         74 AIDGCETVFHTASPVAI-TVKTDPQVELINPAVNGTINVLRTCTKVSSVK--RVILTSSMAAVLAPETKLGPNDVVDETF  150 (325)
T ss_pred             HHcCCCEEEEeCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHcCCce--EEEEecchhheecCCccCCCCCccCcCC
Confidence            99999999999996532 1222344567899999999999999885 577  9999999887754321   111234544


Q ss_pred             CCCCCC------CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC------------cHHHHHHHHHhCCCCeEEecCCcc
Q 044498          169 AWPAEP------QDAYGLEKLATEGLCKHYTKDFEIECRLVGEK------------APAAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       169 ~~~~~p------~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~------------~~~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                        +..|      .++|+.+|+.+|+++..+.+.++++++++|+.            ....++..++. ++..  .+  .+
T Consensus       151 --~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~-~~~~--~~--~~  223 (325)
T PLN02989        151 --FTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMK-GKNP--FN--TT  223 (325)
T ss_pred             --CCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHc-CCCC--CC--Cc
Confidence              3333      47899999999999999998889999999642            22344555554 3332  12  34


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCC---CCCCcccccChHHHHHHc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG---PEGVRGRNSDDTLINEEL  306 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~~~k~~~~l  306 (366)
                      .++|+|++|+|++++.+++.+ .+++||++ +..+|+.|+++.|.+.++.. .+...+.   .........|++|+++ |
T Consensus       224 ~r~~i~v~Dva~a~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~-l  300 (325)
T PLN02989        224 HHRFVDVRDVALAHVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDL-CIADRNEDITELNSVTFNVCLDKVKS-L  300 (325)
T ss_pred             CcCeeEHHHHHHHHHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-CCCCCCCCcccccccCcCCCHHHHHH-c
Confidence            579999999999999999875 35799995 56899999999999999742 1111111   0112345788999875 9


Q ss_pred             CCCCCCCHHHHHHHHHHHHHH
Q 044498          307 GWAPTMKQKDELRITYFWIKE  327 (366)
Q Consensus       307 G~~p~~~~~e~l~~~~~~~~~  327 (366)
                      ||.|+++++++|+++++|+++
T Consensus       301 g~~p~~~l~~gi~~~~~~~~~  321 (325)
T PLN02989        301 GIIEFTPTETSLRDTVLSLKE  321 (325)
T ss_pred             CCCCCCCHHHHHHHHHHHHHH
Confidence            999999999999999999975

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=5.8e-36  Score=274.48  Aligned_cols=267  Identities=15%  Similarity=0.155  Sum_probs=207.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      ||||||||+||||++|+++|+++| +         |++++|..           ..+.+|++|.+.+.++++  ++|+||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~---------V~~~~~~~-----------~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-N---------LIALDVHS-----------TDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-C---------EEEecccc-----------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            589999999999999999999999 8         99988753           235689999999998887  599999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |||+.... ..+..++...+.+|+.++.+|+++|+..++   +|||+||..|||.....|  +.|++  +..|.+.|+.+
T Consensus        60 h~Aa~~~~-~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~---~~v~~Ss~~Vy~~~~~~p--~~E~~--~~~P~~~Yg~s  131 (299)
T PRK09987         60 NAAAHTAV-DKAESEPEFAQLLNATSVEAIAKAANEVGA---WVVHYSTDYVFPGTGDIP--WQETD--ATAPLNVYGET  131 (299)
T ss_pred             ECCccCCc-chhhcCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEccceEECCCCCCC--cCCCC--CCCCCCHHHHH
Confidence            99997653 234556677789999999999999999985   799999999998765544  36655  78899999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCC---------cHHHHHHHHHhCCCCeEEecC--CcceeeeeeHHHHHHHHHHHHhc
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEK---------APAAFSRKAVTSTDNFEMWGD--GKQTRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~---------~~~~~~~~~~~~~~~~~i~~~--~~~~~~~i~v~D~a~~~~~~l~~  250 (366)
                      |+++|+++..+..    +++++|..         ++..++..+.. +.++.++++  +.+.+.+.+++|++.++..+++.
T Consensus       132 K~~~E~~~~~~~~----~~~ilR~~~vyGp~~~~~~~~~~~~~~~-~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~  206 (299)
T PRK09987        132 KLAGEKALQEHCA----KHLIFRTSWVYAGKGNNFAKTMLRLAKE-REELSVINDQFGAPTGAELLADCTAHAIRVALNK  206 (299)
T ss_pred             HHHHHHHHHHhCC----CEEEEecceecCCCCCCHHHHHHHHHhc-CCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhcc
Confidence            9999999887643    45666532         23445554443 677888877  55555666778888888887765


Q ss_pred             C-CCCcEEecCCCcccHHHHHHHHHHhc---CCCCC---CCcCC-----CC-CCCcccccChHHHHHHcCCCCCCCHHHH
Q 044498          251 D-FREPLNIGSDEMVSINEMAEIILSFE---NEKLP---IHPIP-----GP-EGVRGRNSDDTLINEELGWAPTMKQKDE  317 (366)
Q Consensus       251 ~-~~~~~~i~~~~~~s~~el~~~i~~~~---g~~~~---~~~~~-----~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~  317 (366)
                      . .+++||+++++.+|+.|+++.|.+..   |.+.+   +...+     .+ ..+....+|++|+++.|||+|. +++++
T Consensus       207 ~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~  285 (299)
T PRK09987        207 PEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLP-DWQVG  285 (299)
T ss_pred             CCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCc-cHHHH
Confidence            3 45799999999999999999997754   43321   11221     11 2345567899999999999986 99999


Q ss_pred             HHHHHHHH
Q 044498          318 LRITYFWI  325 (366)
Q Consensus       318 l~~~~~~~  325 (366)
                      |+++++-+
T Consensus       286 l~~~~~~~  293 (299)
T PRK09987        286 VKRMLTEL  293 (299)
T ss_pred             HHHHHHHH
Confidence            99998754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.5e-35  Score=278.34  Aligned_cols=295  Identities=14%  Similarity=0.082  Sum_probs=212.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      +.|+||||||+||||++++++|+++|++         |++++|.......     ....+++++.+|+.+.+.+.+++++
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYT---------VHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG   79 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC
Confidence            6679999999999999999999999999         9998886532211     0123468999999999999999999


Q ss_pred             CCEEEEcccccCCcc-ccccCcchhh-----hhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCC---CCCccc
Q 044498           97 VDNMSNLAADMGGMG-FIQSNHSVIM-----YKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQL---DTDVKE  166 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~-~~~~~~~~~~-----~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~---~~~~~e  166 (366)
                      +|+|||+|+..+... ....++..++     +.|+.++.+++++|.+.+ ++  +|||+||.++||.....   ..++.|
T Consensus        80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~--~~v~~SS~~vyg~~~~~~~~~~~~~E  157 (353)
T PLN02896         80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVK--RVVFTSSISTLTAKDSNGRWRAVVDE  157 (353)
T ss_pred             CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCcc--EEEEEechhhccccccCCCCCCccCc
Confidence            999999999764321 1223344433     445689999999998875 78  99999999999854211   112244


Q ss_pred             ccCCC-------CCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc---------HHHHHHHHHh--CCCCe--EEec
Q 044498          167 SEAWP-------AEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA---------PAAFSRKAVT--STDNF--EMWG  226 (366)
Q Consensus       167 ~~~~~-------~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~---------~~~~~~~~~~--~~~~~--~i~~  226 (366)
                      +...+       ..|.++|+.+|+++|+++..+++.++++++++|...         +..++..++.  .+...  ...+
T Consensus       158 ~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  237 (353)
T PLN02896        158 TCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILS  237 (353)
T ss_pred             ccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccc
Confidence            42222       235568999999999999999999999999997421         1233333331  12221  1111


Q ss_pred             ---CCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCC-CCCCcCCCCCCCcccccChHH
Q 044498          227 ---DGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPIPGPEGVRGRNSDDTL  301 (366)
Q Consensus       227 ---~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~k  301 (366)
                         .....++|+|++|+|++++.+++.+ .++.|++ +++.+++.|+++.+.+.++.. ..+...+.+........|.++
T Consensus       238 ~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (353)
T PLN02896        238 AVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKK  316 (353)
T ss_pred             ccccccCceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHH
Confidence               1112469999999999999999865 3567864 578899999999999998743 222333322222234568888


Q ss_pred             HHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          302 INEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       302 ~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ++ +|||.|+++++++|+++++|++++.
T Consensus       317 ~~-~lGw~p~~~l~~~i~~~~~~~~~~~  343 (353)
T PLN02896        317 LR-DLGFEYKYGIEEIIDQTIDCCVDHG  343 (353)
T ss_pred             HH-HcCCCccCCHHHHHHHHHHHHHHCC
Confidence            86 5999999999999999999999864

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.5e-35  Score=273.95  Aligned_cols=280  Identities=18%  Similarity=0.237  Sum_probs=215.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh----cCCCEE
Q 044498           26 ISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT----SGVDNM  100 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~----~~~d~v  100 (366)
                      |||||||||||+++++.|.++|+ +         |++++|...... ........+..|+.+.+.+..+.    .++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~---------v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITD---------ILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCce---------EEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEE
Confidence            69999999999999999999997 7         888876543221 11111245677888887777665    379999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      ||+|+...   ....++...+.+|+.++.+++++|++.++   +|||+||.++||.....   +.|++ .+..|.+.|+.
T Consensus        71 vh~A~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~v~~SS~~vy~~~~~~---~~e~~-~~~~p~~~Y~~  140 (314)
T TIGR02197        71 FHQGACSD---TTETDGEYMMENNYQYSKRLLDWCAEKGI---PFIYASSAATYGDGEAG---FREGR-ELERPLNVYGY  140 (314)
T ss_pred             EECccccC---ccccchHHHHHHHHHHHHHHHHHHHHhCC---cEEEEccHHhcCCCCCC---ccccc-CcCCCCCHHHH
Confidence            99999653   33456677789999999999999999875   69999999999976432   24443 23458889999


Q ss_pred             HHHHHHHHHHHHHHH--cCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEe------cCCcceeeeeeH
Q 044498          181 EKLATEGLCKHYTKD--FEIECRLVGEK---------------APAAFSRKAVTSTDNFEMW------GDGKQTRSLTFI  237 (366)
Q Consensus       181 sK~~~E~~l~~~~~~--~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~------~~~~~~~~~i~v  237 (366)
                      +|..+|.+++++...  .+++++++|..               .+..++..+.. +.++.++      +++++.++|+|+
T Consensus       141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~v  219 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKA-GGNVKLFKSSEGFKDGEQLRDFVYV  219 (314)
T ss_pred             HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhc-CCCeEEecCccccCCCCceeeeEEH
Confidence            999999999876432  35677777521               12334445554 5555554      456778999999


Q ss_pred             HHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCC-----cccccChHHHHHHcCCCCCC
Q 044498          238 DECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGV-----RGRNSDDTLINEELGWAPTM  312 (366)
Q Consensus       238 ~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-----~~~~~~~~k~~~~lG~~p~~  312 (366)
                      +|+++++..++....+++||+++++++|+.|+++.|.+.+|.+..+...+.+...     ....+|++|++++|||.|++
T Consensus       220 ~D~a~~i~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~  299 (314)
T TIGR02197       220 KDVVDVNLWLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFT  299 (314)
T ss_pred             HHHHHHHHHHHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcc
Confidence            9999999999987667899999999999999999999999977554544444332     23468999999999999999


Q ss_pred             CHHHHHHHHHHHHH
Q 044498          313 KQKDELRITYFWIK  326 (366)
Q Consensus       313 ~~~e~l~~~~~~~~  326 (366)
                      +++++|+++++|++
T Consensus       300 ~l~~~l~~~~~~~~  313 (314)
T TIGR02197       300 TLEEGVKDYVQWLL  313 (314)
T ss_pred             cHHHHHHHHHHHHh
Confidence            99999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-35  Score=274.74  Aligned_cols=283  Identities=13%  Similarity=0.091  Sum_probs=212.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.++|||||||||||++|+++|+++|++         |++++|+......        ....+++++.+|+++++.+.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYT---------VKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSV   73 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCE---------EEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHH
Confidence            3578999999999999999999999999         9998886543110        0112568999999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCcc-hhhhhhHHHHHHHHHHHHHc-CCCceeEEEEeccc--ccCCCCC-CCCCccccc
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHS-VIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSAC--IYPEFKQ-LDTDVKESE  168 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~--vyg~~~~-~~~~~~e~~  168 (366)
                      ++++|+|||+|+...   ....++. ..+++|+.++.++++++.+. +++  ||||+||.+  +|+.... ...+++|+.
T Consensus        74 ~~~~d~Vih~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~--~~v~~SS~~~~~y~~~~~~~~~~~~E~~  148 (322)
T PLN02662         74 VDGCEGVFHTASPFY---HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK--RVVVTSSMAAVAYNGKPLTPDVVVDETW  148 (322)
T ss_pred             HcCCCEEEEeCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC--EEEEccCHHHhcCCCcCCCCCCcCCccc
Confidence            999999999999653   2223443 67899999999999999987 888  999999976  4654321 111124443


Q ss_pred             CCCCCC------CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH------------HHHHHHHHhCCCCeEEecCCcc
Q 044498          169 AWPAEP------QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP------------AAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       169 ~~~~~p------~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~------------~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                        +..|      .+.|+.+|..+|+++..+.+.++++++++|+..+            ..++..++. +..  ..  +.+
T Consensus       149 --~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~-~~~--~~--~~~  221 (322)
T PLN02662        149 --FSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLIN-GAQ--TF--PNA  221 (322)
T ss_pred             --CCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhc-CCc--cC--CCC
Confidence              3333      3689999999999999999888999999974321            233444444 332  11  235


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCC-CCCCcCCCCCCCcccccChHHHHHHcCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPIPGPEGVRGRNSDDTLINEELGW  308 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~k~~~~lG~  308 (366)
                      .++|+|++|+|++++.+++.+ .++.||++ ++.+++.|+++.+.+.++.. .+....+..........|++|+++ |||
T Consensus       222 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~  299 (322)
T PLN02662        222 SYRWVDVRDVANAHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKS-LGI  299 (322)
T ss_pred             CcCeEEHHHHHHHHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHH-hCC
Confidence            789999999999999999875 45689987 57899999999999987742 111111112234456789999984 999


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q 044498          309 APTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       309 ~p~~~~~e~l~~~~~~~~~~  328 (366)
                      .+ ++++++|+++++||+++
T Consensus       300 ~~-~~~~~~l~~~~~~~~~~  318 (322)
T PLN02662        300 EF-IPLEVSLKDTVESLKEK  318 (322)
T ss_pred             cc-ccHHHHHHHHHHHHHHc
Confidence            97 59999999999999875

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=8.6e-35  Score=270.17  Aligned_cols=288  Identities=22%  Similarity=0.301  Sum_probs=224.3

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-cc----ccceEEEccCCChhHHHhhhc--CC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DM----FCHEFHLVDLRVMDNCLRMTS--GV   97 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~----~~v~~~~~D~~~~~~l~~~~~--~~   97 (366)
                      +||||||||+||++++++|+++|++         |+++++........ ..    .+++++.+|+.+.+.+.++++  ++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHE---------VVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKI   71 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCe---------EEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCC
Confidence            5899999999999999999999999         98887543321111 10    145788999999999998886  69


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA  177 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~  177 (366)
                      |+|||+|+..... ....++...+..|+.++.++++++.+.+++  +||++||.++||.....+  +.|+.  +..|.+.
T Consensus        72 d~vv~~ag~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~ss~~~~g~~~~~~--~~e~~--~~~~~~~  144 (328)
T TIGR01179        72 DAVIHFAGLIAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQTGVK--KFIFSSSAAVYGEPSSIP--ISEDS--PLGPINP  144 (328)
T ss_pred             cEEEECccccCcc-hhhcCchhhhhhhHHHHHHHHHHHHhcCCC--EEEEecchhhcCCCCCCC--ccccC--CCCCCCc
Confidence            9999999975422 223455667889999999999999999988  999999999998665433  25554  6678899


Q ss_pred             hHHHHHHHHHHHHHHHHH-cCCcEEEeCCCc--------------------HHHHHHHHHhCCCCeEEec------CCcc
Q 044498          178 YGLEKLATEGLCKHYTKD-FEIECRLVGEKA--------------------PAAFSRKAVTSTDNFEMWG------DGKQ  230 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~-~~~~~~i~r~~~--------------------~~~~~~~~~~~~~~~~i~~------~~~~  230 (366)
                      |+.+|..+|.++..++.. .+++++++|+..                    +..+..........+.+++      ++.+
T Consensus       145 y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  224 (328)
T TIGR01179       145 YGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTC  224 (328)
T ss_pred             hHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCce
Confidence            999999999999998877 689999998421                    1112222222234444433      4567


Q ss_pred             eeeeeeHHHHHHHHHHHHhc----CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCC-CcccccChHHHHHH
Q 044498          231 TRSLTFIDECVEGVLRLIKS----DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-VRGRNSDDTLINEE  305 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~----~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~k~~~~  305 (366)
                      .++|+|++|+++++..++..    ..+++||+++++++|+.|+++.+.+.+|.+.++...+.... ......+++|++++
T Consensus       225 ~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (328)
T TIGR01179       225 VRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRE  304 (328)
T ss_pred             EEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHH
Confidence            78999999999999999865    34689999999999999999999999998876655444332 23446799999999


Q ss_pred             cCCCCCCC-HHHHHHHHHHHHHHH
Q 044498          306 LGWAPTMK-QKDELRITYFWIKEQ  328 (366)
Q Consensus       306 lG~~p~~~-~~e~l~~~~~~~~~~  328 (366)
                      |||+|.++ ++++|+++++|++++
T Consensus       305 lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       305 LGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             hCCCCCcchHHHHHHHHHHHHhcC
Confidence            99999997 999999999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=9.1e-35  Score=269.73  Aligned_cols=282  Identities=15%  Similarity=0.146  Sum_probs=209.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++|||||||||||++++++|+++|++         |+++.|+......        .....++++.+|+++.+.+.+++
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYT---------VKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI   75 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH
Confidence            578999999999999999999999999         9988876543110        01135689999999999999999


Q ss_pred             cCCCEEEEcccccCCccccccCc-chhhhhhHHHHHHHHHHHHHc-CCCceeEEEEeccccc--CCCCCC-CCCcccccC
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNH-SVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIY--PEFKQL-DTDVKESEA  169 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vy--g~~~~~-~~~~~e~~~  169 (366)
                      +++|+|||+|+...   ....++ ...++.|+.++.++++++++. +++  ||||+||.++|  +..... ...++|+.+
T Consensus        76 ~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~--rvV~~SS~~~~~~~~~~~~~~~~~~E~~~  150 (322)
T PLN02986         76 EGCDAVFHTASPVF---FTVKDPQTELIDPALKGTINVLNTCKETPSVK--RVILTSSTAAVLFRQPPIEANDVVDETFF  150 (322)
T ss_pred             hCCCEEEEeCCCcC---CCCCCchhhhhHHHHHHHHHHHHHHHhcCCcc--EEEEecchhheecCCccCCCCCCcCcccC
Confidence            99999999999643   112233 346889999999999999986 688  99999998754  432111 111244432


Q ss_pred             CCC----CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH------------HHHHHHHHhCCCCeEEecCCcceee
Q 044498          170 WPA----EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP------------AAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       170 ~~~----~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~------------~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                      ..+    .|.+.|+.+|..+|..+..+.++++++++++|+..+            ..++..++. +...  ++  .+.++
T Consensus       151 ~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~-g~~~--~~--~~~~~  225 (322)
T PLN02986        151 SDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFIN-GKNL--FN--NRFYR  225 (322)
T ss_pred             CChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHc-CCCC--CC--CcCcc
Confidence            211    346889999999999999999988999999975322            233444444 3332  23  45689


Q ss_pred             eeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCccc--ccChHHHHHHcCCCC
Q 044498          234 LTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGR--NSDDTLINEELGWAP  310 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--~~~~~k~~~~lG~~p  310 (366)
                      |+|++|+|++++.+++.+ .++.||++ ++.+|+.|+++.|.+.++. ..+.....+.+....  ..|.+|++ +|||+|
T Consensus       226 ~v~v~Dva~a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~-~lg~~~  302 (322)
T PLN02986        226 FVDVRDVALAHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPD-LCIADTNEESEMNEMICKVCVEKVK-NLGVEF  302 (322)
T ss_pred             eeEHHHHHHHHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC-CCCCCCCccccccccCCccCHHHHH-HcCCcc
Confidence            999999999999999875 45789995 5689999999999999873 222222111222222  37999985 499999


Q ss_pred             CCCHHHHHHHHHHHHHH
Q 044498          311 TMKQKDELRITYFWIKE  327 (366)
Q Consensus       311 ~~~~~e~l~~~~~~~~~  327 (366)
                      + +++|+|+++++|+++
T Consensus       303 ~-~l~e~~~~~~~~~~~  318 (322)
T PLN02986        303 T-PMKSSLRDTILSLKE  318 (322)
T ss_pred             c-CHHHHHHHHHHHHHH
Confidence            7 999999999999987

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=3.6e-34  Score=266.23  Aligned_cols=281  Identities=16%  Similarity=0.201  Sum_probs=219.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+||||||+||||+++++.|+++|++         |++++|...........+++++.+|+.+.+++.++++++|+|||+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~   71 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEE---------VRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHV   71 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCE---------EEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEe
Confidence            47999999999999999999999999         999998765433223335789999999999999999999999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC-CCCCCcccccCCCCCC---CCchH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK-QLDTDVKESEAWPAEP---QDAYG  179 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~-~~~~~~~e~~~~~~~p---~~~Y~  179 (366)
                      |+...   ....++...++.|+.++.++++++.+.+++  +||++||.++|+... ..+  +.|+.  +..|   .+.|+
T Consensus        72 a~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~--~~e~~--~~~~~~~~~~Y~  142 (328)
T TIGR03466        72 AADYR---LWAPDPEEMYAANVEGTRNLLRAALEAGVE--RVVYTSSVATLGVRGDGTP--ADETT--PSSLDDMIGHYK  142 (328)
T ss_pred             ceecc---cCCCCHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEechhhcCcCCCCCC--cCccC--CCCcccccChHH
Confidence            98543   234456778999999999999999999998  999999999998632 223  25543  3333   56899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHH
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEKAP-----------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI  248 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l  248 (366)
                      .+|.+.|++++.+...++++++++|+..+           ..++..++.+..+  ...+  ...+++|++|+|+++..++
T Consensus       143 ~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~i~v~D~a~a~~~~~  218 (328)
T TIGR03466       143 RSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMP--AYVD--TGLNLVHVDDVAEGHLLAL  218 (328)
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCc--eeeC--CCcceEEHHHHHHHHHHHH
Confidence            99999999999998888999999975322           2334444442222  2222  2368999999999999999


Q ss_pred             hcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC----------------CC------------cccccCh
Q 044498          249 KSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE----------------GV------------RGRNSDD  299 (366)
Q Consensus       249 ~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----------------~~------------~~~~~~~  299 (366)
                      ++. .++.|+++ ++.+|+.|+++.+.+.+|.+......|.+.                ..            ....+|+
T Consensus       219 ~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  297 (328)
T TIGR03466       219 ERGRIGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSS  297 (328)
T ss_pred             hCCCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCCh
Confidence            875 45677775 688999999999999999875544443210                00            2346799


Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Q 044498          300 TLINEELGWAPTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       300 ~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  328 (366)
                      +|+++.|||.|+ +++++|++++.||+++
T Consensus       298 ~k~~~~lg~~p~-~~~~~i~~~~~~~~~~  325 (328)
T TIGR03466       298 AKAVRELGYRQR-PAREALRDAVEWFRAN  325 (328)
T ss_pred             HHHHHHcCCCCc-CHHHHHHHHHHHHHHh
Confidence            999999999996 9999999999999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=1.4e-33  Score=266.99  Aligned_cols=266  Identities=17%  Similarity=0.168  Sum_probs=206.4

Q ss_pred             CCCeEEEE----cCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----------cccccceEEEccCCC
Q 044498           22 GKLRISSI----GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----------EDMFCHEFHLVDLRV   86 (366)
Q Consensus        22 ~~~~vlIt----GatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----------~~~~~v~~~~~D~~~   86 (366)
                      ++++||||    |||||||++|+++|+++||+         |++++|.......           ....+++++.+|+.+
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~---------V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d  121 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHE---------VTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD  121 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCE---------EEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH
Confidence            55789999    99999999999999999999         9999997653211           112357899999987


Q ss_pred             hhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccc
Q 044498           87 MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        87 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                      .+.+. ...++|+|||+++.                 +..++.+++++|++.+++  ||||+||.++||.....+.  .|
T Consensus       122 ~~~~~-~~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~~gvk--r~V~~SS~~vyg~~~~~p~--~E  179 (378)
T PLN00016        122 VKSKV-AGAGFDVVYDNNGK-----------------DLDEVEPVADWAKSPGLK--QFLFCSSAGVYKKSDEPPH--VE  179 (378)
T ss_pred             HHhhh-ccCCccEEEeCCCC-----------------CHHHHHHHHHHHHHcCCC--EEEEEccHhhcCCCCCCCC--CC
Confidence            33322 12479999999762                 145788999999999999  9999999999997654442  44


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH----------HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP----------AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                      +.  +..|.+    +|..+|.++++    .+++++++|+..+          ..++..+.. +.++.+++++.+.++++|
T Consensus       180 ~~--~~~p~~----sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~-~~~i~~~g~g~~~~~~i~  248 (378)
T PLN00016        180 GD--AVKPKA----GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVR-GRPVPIPGSGIQLTQLGH  248 (378)
T ss_pred             CC--cCCCcc----hHHHHHHHHHH----cCCCeEEEeceeEECCCCCCchHHHHHHHHHc-CCceeecCCCCeeeceec
Confidence            33  344433    79999987753    4899999975321          334555554 677788888889999999


Q ss_pred             HHHHHHHHHHHHhcC--CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcC-CCC----------CCCcccccChHHHH
Q 044498          237 IDECVEGVLRLIKSD--FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPI-PGP----------EGVRGRNSDDTLIN  303 (366)
Q Consensus       237 v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~-~~~----------~~~~~~~~~~~k~~  303 (366)
                      ++|+|+++..+++++  .+++||+++++.+|+.|+++.+.+.+|.+..+... +..          ........|++|++
T Consensus       249 v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~  328 (378)
T PLN00016        249 VKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAK  328 (378)
T ss_pred             HHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHH
Confidence            999999999999875  47899999999999999999999999987654322 211          11223357999999


Q ss_pred             HHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          304 EELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       304 ~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ++|||.|+++++++|+++++||+.+.
T Consensus       329 ~~LGw~p~~~l~egl~~~~~~~~~~~  354 (378)
T PLN00016        329 EELGWTPKFDLVEDLKDRYELYFGRG  354 (378)
T ss_pred             HhcCCCCCCCHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999865

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.2e-33  Score=233.94  Aligned_cols=285  Identities=18%  Similarity=0.258  Sum_probs=237.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~v  100 (366)
                      |++|||||++|.+|++|.+.+.++|.+-    .+  ....               ..-.+|+++.++.+.++.  ++..|
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~----e~--wvf~---------------~skd~DLt~~a~t~~lF~~ekPthV   59 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDD----EN--WVFI---------------GSKDADLTNLADTRALFESEKPTHV   59 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCC----cc--eEEe---------------ccccccccchHHHHHHHhccCCcee
Confidence            5799999999999999999999988630    00  1111               334689999999998885  69999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc--CCCCCCC-Cc
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE--AWPAEPQ-DA  177 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~--~~~~~p~-~~  177 (366)
                      ||+|+.+++.......+.+++..|+....|++..|.++|++  +++++.|.++|++....|+  +|+.  ..|++|. ..
T Consensus        60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~--K~vsclStCIfPdkt~yPI--dEtmvh~gpphpsN~g  135 (315)
T KOG1431|consen   60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVK--KVVSCLSTCIFPDKTSYPI--DETMVHNGPPHPSNFG  135 (315)
T ss_pred             eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchh--hhhhhcceeecCCCCCCCC--CHHHhccCCCCCCchH
Confidence            99999998766666778889999999999999999999999  9999999999999998887  6655  3466664 55


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEe------C---------CCcHHHHHHHHHh----CCCCeEEecCCcceeeeeeHH
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLV------G---------EKAPAAFSRKAVT----STDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~------r---------~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~i~v~  238 (366)
                      |+..|.++.-.-+.|+.++|..++..      +         ..+++.++.++-.    +..++.+||.|...|.|+|++
T Consensus       136 YsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~  215 (315)
T KOG1431|consen  136 YSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD  215 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh
Confidence            99999888888899999998776554      1         2356777776543    234789999999999999999


Q ss_pred             HHHHHHHHHHhc-CCCCcEEecCCC--cccHHHHHHHHHHhcCCCCCCCcCC-CCCCCcccccChHHHHHHcCCCCCCC-
Q 044498          239 ECVEGVLRLIKS-DFREPLNIGSDE--MVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELGWAPTMK-  313 (366)
Q Consensus       239 D~a~~~~~~l~~-~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~~~~~~~~k~~~~lG~~p~~~-  313 (366)
                      |+|+++++++++ ..-+..+++.|+  .+|++|+++.+.++++...++.++. .+.+.....++++|++. |+|.|+.+ 
T Consensus       216 DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL~s-l~pd~~ft~  294 (315)
T KOG1431|consen  216 DLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKLRS-LLPDFKFTP  294 (315)
T ss_pred             HHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHHHH-hCCCcccCh
Confidence            999999999987 456888888888  8999999999999999998887764 56788899999999965 88999885 


Q ss_pred             HHHHHHHHHHHHHHHHHHhh
Q 044498          314 QKDELRITYFWIKEQVEKEK  333 (366)
Q Consensus       314 ~~e~l~~~~~~~~~~~~~~~  333 (366)
                      |+++|.++++||.+|+.+.+
T Consensus       295 l~~ai~~t~~Wy~~Ny~qar  314 (315)
T KOG1431|consen  295 LEQAISETVQWYLDNYEQAR  314 (315)
T ss_pred             HHHHHHHHHHHHHHhHHhhc
Confidence            99999999999999987643

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.1e-33  Score=255.61  Aligned_cols=244  Identities=17%  Similarity=0.126  Sum_probs=190.9

Q ss_pred             EEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccc--ccccccc-eEEEccCCChhHHHhhhcCCCEEE
Q 044498           27 SSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHM--MEDMFCH-EFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        27 lItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~--~~~~~~v-~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |||||+||||++|+++|+++|  ++         |+++++......  .....+. +++.+|++|++++.++++++|+||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~---------Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~   71 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYE---------VRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVF   71 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceE---------EEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEE
Confidence            699999999999999999999  67         999988765433  1222223 399999999999999999999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC-CCC-CcccccCCCCCCCCchH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ-LDT-DVKESEAWPAEPQDAYG  179 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~-~~~-~~~e~~~~~~~p~~~Y~  179 (366)
                      |+|+....  ......+.++++|+.||++|+++|++.+++  ||||+||.++++.... .+. ..+|+.+.+..+.+.|+
T Consensus        72 H~Aa~~~~--~~~~~~~~~~~vNV~GT~nvl~aa~~~~Vk--rlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~  147 (280)
T PF01073_consen   72 HTAAPVPP--WGDYPPEEYYKVNVDGTRNVLEAARKAGVK--RLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYA  147 (280)
T ss_pred             EeCccccc--cCcccHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEcCcceeEeccCCCCcccCCcCCcccccccCchH
Confidence            99997653  123456778999999999999999999999  9999999999886322 222 12344444455788999


Q ss_pred             HHHHHHHHHHHHHHH---Hc--CCcEEEeCCCcH--------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHH
Q 044498          180 LEKLATEGLCKHYTK---DF--EIECRLVGEKAP--------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLR  246 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~---~~--~~~~~i~r~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  246 (366)
                      .||+++|+++.+...   +.  .+.++++|+..+        ...+..+.+.+......+++....+++|++|+|.+++.
T Consensus       148 ~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvl  227 (280)
T PF01073_consen  148 ESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVL  227 (280)
T ss_pred             HHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHH
Confidence            999999999998765   22  478888875432        22333344435455556888888999999999999988


Q ss_pred             HHhc---C------CCCcEEecCCCccc-HHHHHHHHHHhcCCCCCC
Q 044498          247 LIKS---D------FREPLNIGSDEMVS-INEMAEIILSFENEKLPI  283 (366)
Q Consensus       247 ~l~~---~------~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~~~  283 (366)
                      +.+.   +      .++.|++++++++. +.|++..+.+.+|.+.+.
T Consensus       228 A~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  228 AAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             HHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            7642   2      58899999999999 999999999999987654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=4.4e-34  Score=259.66  Aligned_cols=262  Identities=22%  Similarity=0.274  Sum_probs=190.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      ||||||||+|+||++|++.|.++|++         |++++|.               ..|+.|.+.+.+.++  ++|+||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~---------v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vi   56 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYE---------VIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVI   56 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEE---------EEEESTT---------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCE---------EEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence            69999999999999999999999999         9999766               689999999999876  699999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      ||||... +..++.+++..+.+|+.++.+|.++|...++   ++||+||..||+.....|  +.|++  +++|.+.||.+
T Consensus        57 n~aa~~~-~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~---~li~~STd~VFdG~~~~~--y~E~d--~~~P~~~YG~~  128 (286)
T PF04321_consen   57 NCAAYTN-VDACEKNPEEAYAINVDATKNLAEACKERGA---RLIHISTDYVFDGDKGGP--YTEDD--PPNPLNVYGRS  128 (286)
T ss_dssp             E-------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEGGGS-SSTSSS--B-TTS------SSHHHHH
T ss_pred             ccceeec-HHhhhhChhhhHHHhhHHHHHHHHHHHHcCC---cEEEeeccEEEcCCcccc--cccCC--CCCCCCHHHHH
Confidence            9999764 4577788999999999999999999999998   699999999998775554  36766  78999999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCC---------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCC
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGE---------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF  252 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~---------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  252 (366)
                      |+++|+.+++...    ++.|+|.         +++..++..+ .+++.+.++.  ++.++.++++|+|+++..++++..
T Consensus       129 K~~~E~~v~~~~~----~~~IlR~~~~~g~~~~~~~~~~~~~~-~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~  201 (286)
T PF04321_consen  129 KLEGEQAVRAACP----NALILRTSWVYGPSGRNFLRWLLRRL-RQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNL  201 (286)
T ss_dssp             HHHHHHHHHHH-S----SEEEEEE-SEESSSSSSHHHHHHHHH-HCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcC----CEEEEecceecccCCCchhhhHHHHH-hcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcc
Confidence            9999999988533    5666642         2334444444 4477777754  578899999999999999998864


Q ss_pred             -----CCcEEecCCCcccHHHHHHHHHHhcCCCC-CCCcCCCC------CCCcccccChHHHHHHcCCCCCCCHHHHHHH
Q 044498          253 -----REPLNIGSDEMVSINEMAEIILSFENEKL-PIHPIPGP------EGVRGRNSDDTLINEELGWAPTMKQKDELRI  320 (366)
Q Consensus       253 -----~~~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~------~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~  320 (366)
                           .++||+++++.+|+.|+++.+.+.+|.+. .+...+..      ..+....+|++|+++.+|.++. +++++|++
T Consensus       202 ~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~  280 (286)
T PF04321_consen  202 SGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEE  280 (286)
T ss_dssp             H-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----BHHHHHHH
T ss_pred             cccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCc-CHHHHHHH
Confidence                 49999999999999999999999999876 22222211      1234457899999999999887 89999999


Q ss_pred             HHHHH
Q 044498          321 TYFWI  325 (366)
Q Consensus       321 ~~~~~  325 (366)
                      +++-|
T Consensus       281 ~~~~~  285 (286)
T PF04321_consen  281 LVKQY  285 (286)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            88755

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.8e-33  Score=238.28  Aligned_cols=295  Identities=19%  Similarity=0.176  Sum_probs=239.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----------cccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----------EDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----------~~~~~v~~~~~D~~~~~~l~   91 (366)
                      ++++.||||-||+-|++|++.|+++|++         |.++.|.......          .....+.++.+|++|...+.
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~---------VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~   71 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYE---------VHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLL   71 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcE---------EEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHH
Confidence            3678999999999999999999999999         9999876432211          12334689999999999999


Q ss_pred             hhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           92 RMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        92 ~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      ++++  ++|-|+|+|+.++. ..+...|..+.+++..|+.+||++.+..+.+.+||...||...||.....|.  .|  .
T Consensus        72 r~l~~v~PdEIYNLaAQS~V-~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq--~E--~  146 (345)
T COG1089          72 RILEEVQPDEIYNLAAQSHV-GVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQ--KE--T  146 (345)
T ss_pred             HHHHhcCchhheeccccccc-cccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCcc--cc--C
Confidence            9987  69999999998874 4677888899999999999999999998864579999999999998876653  44  4


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEE--e-------CC-CcHHHH----HHHHHhCCCCeEEecCCcceeeee
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRL--V-------GE-KAPAAF----SRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i--~-------r~-~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                      +|..|.++|+.+|+-+-.+...|...+|+-...  +       |+ .++.+-    +.++..+.+.-...|+-+..|||-
T Consensus       147 TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG  226 (345)
T COG1089         147 TPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWG  226 (345)
T ss_pred             CCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccccccc
Confidence            599999999999999999999999999875432  2       22 233332    223333333333349999999999


Q ss_pred             eHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC-------------------cCCC---CCCCc
Q 044498          236 FIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH-------------------PIPG---PEGVR  293 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~~---~~~~~  293 (366)
                      |+.|.+++++.+++++.+..|.+++|+..|++|+++...+..|.+..++                   +.|.   |.+..
T Consensus       227 ~A~DYVe~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~  306 (345)
T COG1089         227 HAKDYVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVD  306 (345)
T ss_pred             chHHHHHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhh
Confidence            9999999999999999999999999999999999999999999665532                   2221   23344


Q ss_pred             ccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       294 ~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      ....|.+|+++.|||+|.++|++.++.|+++..+...
T Consensus       307 ~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~~~  343 (345)
T COG1089         307 LLLGDPTKAKEKLGWRPEVSLEELVREMVEADLEAAR  343 (345)
T ss_pred             hhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHHHhh
Confidence            4567999999999999999999999999999888754

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1.2e-32  Score=251.33  Aligned_cols=259  Identities=19%  Similarity=0.201  Sum_probs=203.7

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC--CCEEEE
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG--VDNMSN  102 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~--~d~vi~  102 (366)
                      ||||||||||||++++++|+++|++         |++++|.               .+|+.+.+.+.+++++  +|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~---------v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRV---------VVALTSS---------------QLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCE---------EEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence            5999999999999999999999999         9999874               4799999999998875  599999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+.... ......+...+..|+.++.++++++++.+.   +||++||.++|+.....+  +.|+.  +..|.+.|+.+|
T Consensus        57 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~v~~Ss~~vy~~~~~~~--~~E~~--~~~~~~~Y~~~K  128 (287)
T TIGR01214        57 TAAYTDV-DGAESDPEKAFAVNALAPQNLARAAARHGA---RLVHISTDYVFDGEGKRP--YREDD--ATNPLNVYGQSK  128 (287)
T ss_pred             CCccccc-cccccCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEeeeeeecCCCCCC--CCCCC--CCCCcchhhHHH
Confidence            9996532 122234566789999999999999998874   799999999998754433  25554  667889999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCCcH----------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEKAP----------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                      ..+|+.++.+    +++++++|+..+          ..++..+.. +.++.+.++  +.++++|++|+|+++..+++.+ 
T Consensus       129 ~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~  201 (287)
T TIGR01214       129 LAGEQAIRAA----GPNALIVRTSWLYGGGGGRNFVRTMLRLAGR-GEELRVVDD--QIGSPTYAKDLARVIAALLQRLA  201 (287)
T ss_pred             HHHHHHHHHh----CCCeEEEEeeecccCCCCCCHHHHHHHHhhc-CCCceEecC--CCcCCcCHHHHHHHHHHHHhhcc
Confidence            9999988775    678888875422          233444443 556666553  5689999999999999999874 


Q ss_pred             -CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcC-----------CCC-CCCcccccChHHHHHHcCCCCCCCHHHHH
Q 044498          252 -FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPI-----------PGP-EGVRGRNSDDTLINEELGWAPTMKQKDEL  318 (366)
Q Consensus       252 -~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~-----------~~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~l  318 (366)
                       .+++||+++++.+|+.|+++.+.+.+|.+......           +.+ .......+|++|++++||| +.++++++|
T Consensus       202 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~-~~~~~~~~l  280 (287)
T TIGR01214       202 RARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGT-PLPHWREAL  280 (287)
T ss_pred             CCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCC-CCccHHHHH
Confidence             57999999999999999999999999976431111           111 1223457899999999999 556999999


Q ss_pred             HHHHH
Q 044498          319 RITYF  323 (366)
Q Consensus       319 ~~~~~  323 (366)
                      ++++.
T Consensus       281 ~~~~~  285 (287)
T TIGR01214       281 RAYLQ  285 (287)
T ss_pred             HHHHh
Confidence            98775

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.4e-32  Score=243.61  Aligned_cols=287  Identities=14%  Similarity=0.067  Sum_probs=209.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--------ccccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++|+|||||||||++|+++|+++||.         |++..|++.+..        .....+...+.+|+.+++++.++
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~---------V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~a   75 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYT---------VRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKA   75 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCE---------EEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHH
Confidence            5689999999999999999999999999         999999887521        11223468999999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCC---CCCCCCcccccC
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEF---KQLDTDVKESEA  169 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~---~~~~~~~~e~~~  169 (366)
                      +++||.|||+|..+...  ......+.++.++.|+.|++++|++.+ ++  ||||+||.+.-...   .+....++|+.+
T Consensus        76 i~gcdgVfH~Asp~~~~--~~~~e~~li~pav~Gt~nVL~ac~~~~sVk--rvV~TSS~aAv~~~~~~~~~~~vvdE~~w  151 (327)
T KOG1502|consen   76 IDGCDGVFHTASPVDFD--LEDPEKELIDPAVKGTKNVLEACKKTKSVK--RVVYTSSTAAVRYNGPNIGENSVVDEESW  151 (327)
T ss_pred             HhCCCEEEEeCccCCCC--CCCcHHhhhhHHHHHHHHHHHHHhccCCcc--eEEEeccHHHhccCCcCCCCCcccccccC
Confidence            99999999999977531  122234789999999999999999998 99  99999996554322   222223455543


Q ss_pred             CCC----CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc------------HHHHHHHHHhCCCCeEEecCCcceee
Q 044498          170 WPA----EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA------------PAAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       170 ~~~----~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~------------~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                      .+.    .-...|..+|..+|+...+++++.+++.+++.|..            ....+...++ |.. ..+.+  ....
T Consensus       152 sd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~-G~~-~~~~n--~~~~  227 (327)
T KOG1502|consen  152 SDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIK-GLA-ETYPN--FWLA  227 (327)
T ss_pred             CcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHh-ccc-ccCCC--Ccee
Confidence            322    12367999999999999999999999988773321            1233334444 322 11122  2334


Q ss_pred             eeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC--C-CCCCcccccChHHHHHHcCCC
Q 044498          234 LTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP--G-PEGVRGRNSDDTLINEELGWA  309 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~--~-~~~~~~~~~~~~k~~~~lG~~  309 (366)
                      |+|++|+|.+.+.+++.+ ..+.|.+.+ +..++.|+++++.+.+..-. +....  . .........+.+|++.+.|+.
T Consensus       228 ~VdVrDVA~AHv~a~E~~~a~GRyic~~-~~~~~~ei~~~l~~~~P~~~-ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~  305 (327)
T KOG1502|consen  228 FVDVRDVALAHVLALEKPSAKGRYICVG-EVVSIKEIADILRELFPDYP-IPKKNAEEHEGFLTSFKVSSEKLKSLGGFK  305 (327)
T ss_pred             eEeHHHHHHHHHHHHcCcccCceEEEec-CcccHHHHHHHHHHhCCCCC-CCCCCCccccccccccccccHHHHhcccce
Confidence            999999999999999997 467777775 45669999999999886432 11111  1 111222357899996644454


Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q 044498          310 PTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       310 p~~~~~e~l~~~~~~~~~~  328 (366)
                      . ++++|++.+++.++++.
T Consensus       306 ~-~~l~e~~~dt~~sl~~~  323 (327)
T KOG1502|consen  306 F-RPLEETLSDTVESLREK  323 (327)
T ss_pred             e-cChHHHHHHHHHHHHHh
Confidence            4 49999999999999875

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-32  Score=248.19  Aligned_cols=299  Identities=17%  Similarity=0.154  Sum_probs=236.1

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccc-c--cc---ccccceEEEccCCChhHHH
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEH-M--ME---DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~-~--~~---~~~~v~~~~~D~~~~~~l~   91 (366)
                      |+++.+++||||+||+|+||+++|++++  .+         |++++..+... .  ..   ....++++.+|+.+...+.
T Consensus         1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~---------irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~   71 (361)
T KOG1430|consen    1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLE---------IRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSIS   71 (361)
T ss_pred             CCcCCEEEEECCccHHHHHHHHHHHhcccccE---------EEEeccCccccccchhhhcccCCceeEEecchhhhhhhh
Confidence            3567889999999999999999999998  66         99998766521 1  11   2456789999999999999


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      ++++++ +|+|||+... +.....+++..+++|+.||.+++++|++.+++  ++||+||..|+....... ..+|+.+.|
T Consensus        72 ~a~~~~-~Vvh~aa~~~-~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~--~lIYtSs~~Vvf~g~~~~-n~~E~~p~p  146 (361)
T KOG1430|consen   72 NAFQGA-VVVHCAASPV-PDFVENDRDLAMRVNVNGTLNVIEACKELGVK--RLIYTSSAYVVFGGEPII-NGDESLPYP  146 (361)
T ss_pred             hhccCc-eEEEeccccC-ccccccchhhheeecchhHHHHHHHHHHhCCC--EEEEecCceEEeCCeecc-cCCCCCCCc
Confidence            999999 8888887543 44666678899999999999999999999999  999999999987666521 237777667


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH--------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          172 AEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP--------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       172 ~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      ....++|+.||+.+|+++++.....++..+.+|+..+        ...+..+++.+......+++..+.++++++.++.+
T Consensus       147 ~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~a  226 (361)
T KOG1430|consen  147 LKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWA  226 (361)
T ss_pred             cccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHH
Confidence            6677899999999999999988666788888875433        23333344446666666888888999999999988


Q ss_pred             HHHHHh----c---CCCCcEEecCCCcccHHHHHHHHHHhcCCCCC-CCcCCCCC---------------------C---
Q 044498          244 VLRLIK----S---DFREPLNIGSDEMVSINEMAEIILSFENEKLP-IHPIPGPE---------------------G---  291 (366)
Q Consensus       244 ~~~~l~----~---~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~---------------------~---  291 (366)
                      ...+..    .   ..|++|+|.+++++...+++..+.+.+|...+ ....|...                     -   
T Consensus       227 hilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~  306 (361)
T KOG1430|consen  227 HILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRF  306 (361)
T ss_pred             HHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChh
Confidence            877642    2   26899999999999999999999999998877 33333210                     0   


Q ss_pred             -----CcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 044498          292 -----VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKE  332 (366)
Q Consensus       292 -----~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~  332 (366)
                           ......+..|++++|||.|..++++++.+++.|+.......
T Consensus       307 ~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~~  352 (361)
T KOG1430|consen  307 RVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDSA  352 (361)
T ss_pred             heeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhcc
Confidence                 01234699999999999999999999999999988865443

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-31  Score=235.39  Aligned_cols=261  Identities=18%  Similarity=0.218  Sum_probs=211.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      |+|||||++|++|++|.+.|. .+++         |+++++..               .|++|++.+.++++  ++|+||
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~---------v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVI   55 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFE---------VIATDRAE---------------LDITDPDAVLEVIRETRPDVVI   55 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCce---------EEeccCcc---------------ccccChHHHHHHHHhhCCCEEE
Confidence            459999999999999999888 6688         99998763               89999999999986  689999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+|+++. ...++.+++..+.+|..+..++.++|.+.|.   ++||+||.+||....+.|  +.|++  +++|.+.||.|
T Consensus        56 n~AAyt~-vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga---~lVhiSTDyVFDG~~~~~--Y~E~D--~~~P~nvYG~s  127 (281)
T COG1091          56 NAAAYTA-VDKAESEPELAFAVNATGAENLARAAAEVGA---RLVHISTDYVFDGEKGGP--YKETD--TPNPLNVYGRS  127 (281)
T ss_pred             ECccccc-cccccCCHHHHHHhHHHHHHHHHHHHHHhCC---eEEEeecceEecCCCCCC--CCCCC--CCCChhhhhHH
Confidence            9999886 4577778889999999999999999999998   599999999998887655  48887  89999999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeC--------CCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-C
Q 044498          182 KLATEGLCKHYTKDFEIECRLVG--------EKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-F  252 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~  252 (366)
                      |+++|..++.+.    -...|+|        ++.+...|.+..+.++++.+..  +++.+.+++.|+|+++..++... .
T Consensus       128 Kl~GE~~v~~~~----~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~  201 (281)
T COG1091         128 KLAGEEAVRAAG----PRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKE  201 (281)
T ss_pred             HHHHHHHHHHhC----CCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhcccc
Confidence            999999998874    3444443        1223333444444577777754  58888999999999999998876 5


Q ss_pred             CCcEEecCCCcccHHHHHHHHHHhcCCCCCCC-cCCC---C---CCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHH
Q 044498          253 REPLNIGSDEMVSINEMAEIILSFENEKLPIH-PIPG---P---EGVRGRNSDDTLINEELGWAPTMKQKDELRITYFW  324 (366)
Q Consensus       253 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~---~---~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~  324 (366)
                      +++||+++....||.|+++.|.+..+.+..+. ....   +   ..+....+++.|+++.+|+.|. ++++.++.+++.
T Consensus       202 ~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~  279 (281)
T COG1091         202 GGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE  279 (281)
T ss_pred             CcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence            66999998888999999999999998654332 1111   1   1233457899999999999887 899999988764

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.5e-32  Score=257.11  Aligned_cols=277  Identities=13%  Similarity=0.050  Sum_probs=207.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----------ccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----------~~~~v~~~~~D~~~~~~l   90 (366)
                      ++++||||||+||||++++++|+++|++         |+++.|+.......           ...++.++.+|++|.+.+
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~---------V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l  122 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGYS---------VRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESL  122 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHH
Confidence            6789999999999999999999999999         99877754321110           012468899999999999


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecc--cccCCCC--CCCCCcc
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSA--CIYPEFK--QLDTDVK  165 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~--~vyg~~~--~~~~~~~  165 (366)
                      .++++++|.|||+|+....... ........+.|+.++.++++++++. +++  ||||+||.  .+||...  ..+..+.
T Consensus       123 ~~~i~~~d~V~hlA~~~~~~~~-~~~~~~~~~~nv~gt~~llea~~~~~~v~--r~V~~SS~~~~vyg~~~~~~~~~~i~  199 (367)
T PLN02686        123 HEAFDGCAGVFHTSAFVDPAGL-SGYTKSMAELEAKASENVIEACVRTESVR--KCVFTSSLLACVWRQNYPHDLPPVID  199 (367)
T ss_pred             HHHHHhccEEEecCeeeccccc-ccccchhhhhhHHHHHHHHHHHHhcCCcc--EEEEeccHHHhcccccCCCCCCcccC
Confidence            9999999999999997642211 1122345678999999999999986 799  99999996  4787521  1111124


Q ss_pred             cccC----CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCccee
Q 044498          166 ESEA----WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       166 e~~~----~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      |+..    .+..|.++|+.+|+++|.++..+++.++++++++|+..+         ...+..++. +. ..+++++  .+
T Consensus       200 E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~-g~-~~~~g~g--~~  275 (367)
T PLN02686        200 EESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLK-GA-QEMLADG--LL  275 (367)
T ss_pred             CCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhc-CC-CccCCCC--Cc
Confidence            4321    234577889999999999999998888999999974321         112223443 32 4455554  35


Q ss_pred             eeeeHHHHHHHHHHHHhc----CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCC--CCCCcccccChHHHHHHc
Q 044498          233 SLTFIDECVEGVLRLIKS----DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG--PEGVRGRNSDDTLINEEL  306 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~----~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~k~~~~l  306 (366)
                      +|+||+|++++++.+++.    ..+++| +++++.+++.|+++.|.+.+|.+......+.  +.+.....+|++|++++|
T Consensus       276 ~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l  354 (367)
T PLN02686        276 ATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLM  354 (367)
T ss_pred             CeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHH
Confidence            799999999999999974    245678 8888999999999999999998766655553  345667789999999999


Q ss_pred             CCCCCCCHH
Q 044498          307 GWAPTMKQK  315 (366)
Q Consensus       307 G~~p~~~~~  315 (366)
                      ||.|+...+
T Consensus       355 ~~~~~~~~~  363 (367)
T PLN02686        355 SRTRRCCYD  363 (367)
T ss_pred             HHhhhcccc
Confidence            999876544

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=3.1e-32  Score=252.55  Aligned_cols=268  Identities=18%  Similarity=0.132  Sum_probs=207.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|+||||||+||||++++++|+++|  ++         |++++|.......    ....++.++.+|++|.+.+.++++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~---------V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~   73 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKK---------IIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR   73 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcE---------EEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh
Confidence            56899999999999999999999986  67         9988876543210    111246899999999999999999


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ  175 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~  175 (366)
                      ++|+|||+||.... .....++...+++|+.++.++++++.+.+++  +||++||..                  +..|.
T Consensus        74 ~iD~Vih~Ag~~~~-~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~--~iV~~SS~~------------------~~~p~  132 (324)
T TIGR03589        74 GVDYVVHAAALKQV-PAAEYNPFECIRTNINGAQNVIDAAIDNGVK--RVVALSTDK------------------AANPI  132 (324)
T ss_pred             cCCEEEECcccCCC-chhhcCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEeCCC------------------CCCCC
Confidence            99999999997542 2334556778999999999999999999988  999999942                  23456


Q ss_pred             CchHHHHHHHHHHHHHHH---HHcCCcEEEeCCCcH--------HHHHHHHHhCCC-CeEEecCCcceeeeeeHHHHHHH
Q 044498          176 DAYGLEKLATEGLCKHYT---KDFEIECRLVGEKAP--------AAFSRKAVTSTD-NFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~---~~~~~~~~i~r~~~~--------~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      ++|+.+|+++|.+++.++   ..++++++++|+..+        ..+...+.. +. ++++. ++.+.++|+|++|++++
T Consensus       133 ~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~-~~~~~~i~-~~~~~r~~i~v~D~a~a  210 (324)
T TIGR03589       133 NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEE-GVTELPIT-DPRMTRFWITLEQGVNF  210 (324)
T ss_pred             CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHh-CCCCeeeC-CCCceEeeEEHHHHHHH
Confidence            789999999999987754   356899999975433        344444443 44 56664 67788999999999999


Q ss_pred             HHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCC--cccccChHHHHHHcCCCCCCCHHHHHHH
Q 044498          244 VLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGV--RGRNSDDTLINEELGWAPTMKQKDELRI  320 (366)
Q Consensus       244 ~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~k~~~~lG~~p~~~~~e~l~~  320 (366)
                      ++.+++.. .+++| ++++..+++.|+++.+.+...    +...+.+.+.  .....|.+|++++|||.|+++++++++ 
T Consensus       211 ~~~al~~~~~~~~~-~~~~~~~sv~el~~~i~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~-  284 (324)
T TIGR03589       211 VLKSLERMLGGEIF-VPKIPSMKITDLAEAMAPECP----HKIVGIRPGEKLHEVMITEDDARHTYELGDYYAILPSIS-  284 (324)
T ss_pred             HHHHHhhCCCCCEE-ccCCCcEEHHHHHHHHHhhCC----eeEeCCCCCchhHhhhcChhhhhhhcCCCCeEEEccccc-
Confidence            99999875 45677 566778999999999998653    2333334433  335689999999999999999999886 


Q ss_pred             HHHHHHHHH
Q 044498          321 TYFWIKEQV  329 (366)
Q Consensus       321 ~~~~~~~~~  329 (366)
                        .|.++..
T Consensus       285 --~~~~~~~  291 (324)
T TIGR03589       285 --FWNKDRY  291 (324)
T ss_pred             --cccccch
Confidence              5655553

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.1e-31  Score=248.29  Aligned_cols=266  Identities=13%  Similarity=0.065  Sum_probs=204.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|||||||||||++++++|+++|++         |++++|+..........+++++.+|++|++.+.++++++|+|||+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~---------V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~   71 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQ---------VRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDA   71 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCe---------EEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEEC
Confidence            58999999999999999999999999         999999864432223346899999999999999999999999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      ++..      ..++....++|+.++.+++++|++.+++  ||||+||.....                 .+..+|..+|.
T Consensus        72 ~~~~------~~~~~~~~~~~~~~~~~l~~aa~~~gvk--r~I~~Ss~~~~~-----------------~~~~~~~~~K~  126 (317)
T CHL00194         72 STSR------PSDLYNAKQIDWDGKLALIEAAKAAKIK--RFIFFSILNAEQ-----------------YPYIPLMKLKS  126 (317)
T ss_pred             CCCC------CCCccchhhhhHHHHHHHHHHHHHcCCC--EEEEeccccccc-----------------cCCChHHHHHH
Confidence            7632      2345567888999999999999999999  999999853210                 12345889999


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCCcHH-HHHHH----HHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcE
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEKAPA-AFSRK----AVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPL  256 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~~~~-~~~~~----~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~  256 (366)
                      .+|.+++.    .+++++++|+..+. .++..    .+. +.++.+ ..+.+.++|+|++|+|+++..+++.+  .+++|
T Consensus       127 ~~e~~l~~----~~l~~tilRp~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  200 (317)
T CHL00194        127 DIEQKLKK----SGIPYTIFRLAGFFQGLISQYAIPILE-KQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTF  200 (317)
T ss_pred             HHHHHHHH----cCCCeEEEeecHHhhhhhhhhhhhhcc-CCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEE
Confidence            99987754    58999999976432 22221    122 334444 34556689999999999999999764  57899


Q ss_pred             EecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCC---------------------------Cc-ccccChHHHHHHcCC
Q 044498          257 NIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG---------------------------VR-GRNSDDTLINEELGW  308 (366)
Q Consensus       257 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---------------------------~~-~~~~~~~k~~~~lG~  308 (366)
                      |+++++.+|+.|+++.+.+.+|++..+...|.+..                           .. ....+.+++.+.||+
T Consensus       201 ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~  280 (317)
T CHL00194        201 PLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKI  280 (317)
T ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCC
Confidence            99999999999999999999998766555553110                           00 112356788889999


Q ss_pred             CCC--CCHHHHHHHHHHHHHHHH
Q 044498          309 APT--MKQKDELRITYFWIKEQV  329 (366)
Q Consensus       309 ~p~--~~~~e~l~~~~~~~~~~~  329 (366)
                      .|.  .++++.+++.+.-.+.+.
T Consensus       281 ~p~~~~~~~~~~~~~~~~~~~~~  303 (317)
T CHL00194        281 DPNELISLEDYFQEYFERILKRL  303 (317)
T ss_pred             ChhhhhhHHHHHHHHHHHHHHHH
Confidence            984  588888888877777654

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=3.8e-31  Score=242.09  Aligned_cols=269  Identities=16%  Similarity=0.156  Sum_probs=194.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      ..||||||||+||||++|++.|+++|++         |+...                  .|+.+.+.+...++  ++|+
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~---------V~~~~------------------~~~~~~~~v~~~l~~~~~D~   60 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGID---------FHYGS------------------GRLENRASLEADIDAVKPTH   60 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCE---------EEEec------------------CccCCHHHHHHHHHhcCCCE
Confidence            4578999999999999999999999999         76431                  34455555665555  7999


Q ss_pred             EEEcccccCCcc--ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCC----CCcccccCCCCC
Q 044498          100 MSNLAADMGGMG--FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD----TDVKESEAWPAE  173 (366)
Q Consensus       100 vi~~a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~----~~~~e~~~~~~~  173 (366)
                      |||+||..+.+.  .+..++..++++|+.++.+|+++|++.+++   ++++||.++|+.....|    .++.|++ .+..
T Consensus        61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~---~v~~sS~~vy~~~~~~p~~~~~~~~Ee~-~p~~  136 (298)
T PLN02778         61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV---LTNYATGCIFEYDDAHPLGSGIGFKEED-TPNF  136 (298)
T ss_pred             EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---EEEEecceEeCCCCCCCcccCCCCCcCC-CCCC
Confidence            999999875322  244677888999999999999999999986   56677778887543211    1134443 2334


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC---CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhc
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGE---KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  250 (366)
                      |.+.|+.+|+++|.++..++..+++++.+...   .....|+..++. +.++...+     .+|+|++|++++++.+++.
T Consensus       137 ~~s~Yg~sK~~~E~~~~~y~~~~~lr~~~~~~~~~~~~~~fi~~~~~-~~~~~~~~-----~s~~yv~D~v~al~~~l~~  210 (298)
T PLN02778        137 TGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKITR-YEKVVNIP-----NSMTILDELLPISIEMAKR  210 (298)
T ss_pred             CCCchHHHHHHHHHHHHHhhccEEeeecccCCcccccHHHHHHHHHc-CCCeeEcC-----CCCEEHHHHHHHHHHHHhC
Confidence            56899999999999999988766666644322   234567777776 45443332     3699999999999999987


Q ss_pred             CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCC---CcCCCCC-C---CcccccChHHHHHHcCCCCCCCHHHHHHHHHH
Q 044498          251 DFREPLNIGSDEMVSINEMAEIILSFENEKLPI---HPIPGPE-G---VRGRNSDDTLINEELGWAPTMKQKDELRITYF  323 (366)
Q Consensus       251 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~~~-~---~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~  323 (366)
                      ..+++||+++++.+|+.|+++.+.+.+|...++   ...+... .   .....+|.+|+++.++-.+. ..+++++..++
T Consensus       211 ~~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~  289 (298)
T PLN02778        211 NLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVFE  289 (298)
T ss_pred             CCCCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccc-hHHHHHHHHHH
Confidence            656899999999999999999999999965321   1111100 1   11226899999998765444 55777777777


Q ss_pred             HHHHH
Q 044498          324 WIKEQ  328 (366)
Q Consensus       324 ~~~~~  328 (366)
                      -++.+
T Consensus       290 ~~~~~  294 (298)
T PLN02778        290 PNKKT  294 (298)
T ss_pred             HHHhh
Confidence            66554

>PRK05865 hypothetical protein; Provisional

Probab=99.98  E-value=1e-30  Score=262.97  Aligned_cols=269  Identities=15%  Similarity=0.125  Sum_probs=207.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|+|||||||||++++++|+++|++         |++++|......   ..++.++.+|+++.+.+.++++++|+|||+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~---------Vv~l~R~~~~~~---~~~v~~v~gDL~D~~~l~~al~~vD~VVHl   68 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHE---------VVGIARHRPDSW---PSSADFIAADIRDATAVESAMTGADVVAHC   68 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCE---------EEEEECCchhhc---ccCceEEEeeCCCHHHHHHHHhCCCEEEEC
Confidence            58999999999999999999999999         999998753321   124689999999999999999999999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      |+...          ..+++|+.++.++++++++.+++  +|||+||..                             |.
T Consensus        69 Aa~~~----------~~~~vNv~GT~nLLeAa~~~gvk--r~V~iSS~~-----------------------------K~  107 (854)
T PRK05865         69 AWVRG----------RNDHINIDGTANVLKAMAETGTG--RIVFTSSGH-----------------------------QP  107 (854)
T ss_pred             CCccc----------chHHHHHHHHHHHHHHHHHcCCC--eEEEECCcH-----------------------------HH
Confidence            98532          15688999999999999999998  999999831                             78


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCCcH-----HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcE
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEKAP-----AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPL  256 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~  256 (366)
                      ++|+++.+    ++++++++|+..+     ..++..+..  .++...+++...++|+|++|+++++..+++..  .+++|
T Consensus       108 aaE~ll~~----~gl~~vILRp~~VYGP~~~~~i~~ll~--~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvy  181 (854)
T PRK05865        108 RVEQMLAD----CGLEWVAVRCALIFGRNVDNWVQRLFA--LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPV  181 (854)
T ss_pred             HHHHHHHH----cCCCEEEEEeceEeCCChHHHHHHHhc--CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeE
Confidence            88887743    5899999986533     344444432  22222345556789999999999999998653  46899


Q ss_pred             EecCCCcccHHHHHHHHHHhcC---CCCCCCcCCCC---CCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          257 NIGSDEMVSINEMAEIILSFEN---EKLPIHPIPGP---EGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       257 ~i~~~~~~s~~el~~~i~~~~g---~~~~~~~~~~~---~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      |+++++.+|+.|+++.+.+...   .+......+..   .......+|++|++++|||+|+++++++|+++++||+.+..
T Consensus       182 NIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ri~  261 (854)
T PRK05865        182 NLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGRIG  261 (854)
T ss_pred             EEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcc
Confidence            9999999999999999887532   11111111100   01123468999999999999999999999999999998765


Q ss_pred             Hhhh---cCCceeeeccccccccc
Q 044498          331 KEKA---QGIDLSIYGSSNVVATQ  351 (366)
Q Consensus       331 ~~~~---~~~~~~~~~~~~~~~~~  351 (366)
                      -...   .+|++.+-++-..|+.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~  285 (854)
T PRK05865        262 LGKRTFSLPWRLANIQDLPAVDSP  285 (854)
T ss_pred             ccccccccchhhccccccccccCc
Confidence            4444   78999888887777554

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.97  E-value=8.2e-31  Score=232.18  Aligned_cols=217  Identities=27%  Similarity=0.390  Sum_probs=184.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhcC--CCEEEE
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTSG--VDNMSN  102 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~~--~d~vi~  102 (366)
                      |||||||||||++++++|+++|+.         |+.+.|......... ..+++++.+|+.+.+.+.+++++  +|+|||
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~   71 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHE---------VIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIH   71 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTE---------EEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCc---------cccccccccccccccccceEEEEEeeccccccccccccccCceEEEE
Confidence            799999999999999999999999         999998877654322 22679999999999999999874  599999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+..+. .....++...++.|+.++.++++++++.+++  +|||+||..+|+.....+  ++|+.  +..|.+.|+.+|
T Consensus        72 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~i~~sS~~~y~~~~~~~--~~e~~--~~~~~~~Y~~~K  144 (236)
T PF01370_consen   72 LAAFSSN-PESFEDPEEIIEANVQGTRNLLEAAREAGVK--RFIFLSSASVYGDPDGEP--IDEDS--PINPLSPYGASK  144 (236)
T ss_dssp             EBSSSSH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTS--EEEEEEEGGGGTSSSSSS--BETTS--GCCHSSHHHHHH
T ss_pred             eeccccc-ccccccccccccccccccccccccccccccc--cccccccccccccccccc--ccccc--cccccccccccc
Confidence            9997531 1223577788999999999999999999998  999999999999985444  25554  668999999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCC--------------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHH
Q 044498          183 LATEGLCKHYTKDFEIECRLVGE--------------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI  248 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~--------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l  248 (366)
                      ...|+++..+.++++++++++|+              ..+..++..+.+ ++++.+++++.+.++++|++|+|++++.++
T Consensus       145 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  223 (236)
T PF01370_consen  145 RAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALK-GKPIKIPGDGSQVRDFIHVDDLAEAIVAAL  223 (236)
T ss_dssp             HHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHT-TSSEEEESTSSCEEEEEEHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccchhhHHhhc-CCcccccCCCCCccceEEHHHHHHHHHHHH
Confidence            99999999999999999999952              234667777776 777899999999999999999999999999


Q ss_pred             hcCC--CCcEEec
Q 044498          249 KSDF--REPLNIG  259 (366)
Q Consensus       249 ~~~~--~~~~~i~  259 (366)
                      +++.  +++||++
T Consensus       224 ~~~~~~~~~yNig  236 (236)
T PF01370_consen  224 ENPKAAGGIYNIG  236 (236)
T ss_dssp             HHSCTTTEEEEES
T ss_pred             hCCCCCCCEEEeC
Confidence            9876  8999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-28  Score=248.31  Aligned_cols=285  Identities=14%  Similarity=0.124  Sum_probs=208.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHH--HcCCCCCCCCCccEEEEEeCCCccccc-c-----ccccceEEEccCCCh------hH
Q 044498           24 LRISSIGVGGFIPSNIARRLK--SERHYSTSIPNALYIIASDWNKNEHMM-E-----DMFCHEFHLVDLRVM------DN   89 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~--~~g~~~~~~~~~~~V~~~~r~~~~~~~-~-----~~~~v~~~~~D~~~~------~~   89 (366)
                      |+|||||||||||++|+++|+  +.|++         |++++|....... .     ...+++++.+|++++      +.
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~---------V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   71 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREAT---------VHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEAD   71 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCE---------EEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHH
Confidence            589999999999999999999  47899         9999986432110 0     113578999999984      34


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      +..+ +++|+|||||+....    ..+.....+.|+.++.+++++|++.+++  +|||+||..+||.....   +.|+..
T Consensus        72 ~~~l-~~~D~Vih~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~~~~~--~~v~~SS~~v~g~~~~~---~~e~~~  141 (657)
T PRK07201         72 IAEL-GDIDHVVHLAAIYDL----TADEEAQRAANVDGTRNVVELAERLQAA--TFHHVSSIAVAGDYEGV---FREDDF  141 (657)
T ss_pred             HHHh-cCCCEEEECceeecC----CCCHHHHHHHHhHHHHHHHHHHHhcCCC--eEEEEeccccccCccCc---cccccc
Confidence            5555 899999999997542    2345567889999999999999999999  99999999999865432   133321


Q ss_pred             -CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH------------------HHHHHHHhCCCCeEEecCCcc
Q 044498          170 -WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA------------------AFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       170 -~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~------------------~~~~~~~~~~~~~~i~~~~~~  230 (366)
                       .+..+.+.|+.+|+++|+++.+   ..+++++++|+..+.                  .++..+........+++.+..
T Consensus       142 ~~~~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (657)
T PRK07201        142 DEGQGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGG  218 (657)
T ss_pred             hhhcCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCC
Confidence             1334567899999999998864   348999999864331                  122222111122334455566


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCcccHHHHHHHHHHhcCCCC---CCCcCCCCC---------------
Q 044498          231 TRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVSINEMAEIILSFENEKL---PIHPIPGPE---------------  290 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~---~~~~~~~~~---------------  290 (366)
                      ..+++|++|+++++..+++.+  .+++||+++++++++.|+++.+.+.+|.+.   .....|...               
T Consensus       219 ~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  298 (657)
T PRK07201        219 RTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLR  298 (657)
T ss_pred             eeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHH
Confidence            789999999999999998754  578999999999999999999999999876   433333210               


Q ss_pred             -------C---------CcccccChHHHHHHc---CCCCCCCHHHHHHHHHHHHHHHHHH
Q 044498          291 -------G---------VRGRNSDDTLINEEL---GWAPTMKQKDELRITYFWIKEQVEK  331 (366)
Q Consensus       291 -------~---------~~~~~~~~~k~~~~l---G~~p~~~~~e~l~~~~~~~~~~~~~  331 (366)
                             +         .....+|.+++++.|   |+... .+.+.+...++||.++...
T Consensus       299 ~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~~~  357 (657)
T PRK07201        299 NAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHLDP  357 (657)
T ss_pred             HHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcCCh
Confidence                   0         012256889999888   43333 6889999999999887544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=1.7e-28  Score=224.34  Aligned_cols=270  Identities=16%  Similarity=0.120  Sum_probs=187.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEccc
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAA  105 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~  105 (366)
                      |||||||||||+++++.|+++|++         |++++|+..........  .  ..++.. ..+...+.++|+|||+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~--~--~~~~~~-~~~~~~~~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHE---------VTILTRSPPAGANTKWE--G--YKPWAP-LAESEALEGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCE---------EEEEeCCCCCCCcccce--e--eecccc-cchhhhcCCCCEEEECCC
Confidence            699999999999999999999999         99999987643221111  1  112222 344556789999999999


Q ss_pred             ccCCcc-ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHH
Q 044498          106 DMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLA  184 (366)
Q Consensus       106 ~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~  184 (366)
                      ...... .........++.|+.++.++++++++.+++..+||++||..+||.....+  +.|+.  +..|.+.|+..+..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~--~~E~~--~~~~~~~~~~~~~~  142 (292)
T TIGR01777        67 EPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRV--FTEED--SPAGDDFLAELCRD  142 (292)
T ss_pred             CCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCC--cCccc--CCCCCChHHHHHHH
Confidence            653211 11123456678999999999999999986311577777778899755443  25554  44556667777777


Q ss_pred             HHHHHHHHHHHcCCcEEEeCCCcH--------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-CCCc
Q 044498          185 TEGLCKHYTKDFEIECRLVGEKAP--------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-FREP  255 (366)
Q Consensus       185 ~E~~l~~~~~~~~~~~~i~r~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~  255 (366)
                      .|..+... .+.+++++++|+..+        ..++. ....... ..++++++.++++|++|+|+++..+++++ ..++
T Consensus       143 ~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~  219 (292)
T TIGR01777       143 WEEAAQAA-EDLGTRVVLLRTGIVLGPKGGALAKMLP-PFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALENASISGP  219 (292)
T ss_pred             HHHHhhhc-hhcCCceEEEeeeeEECCCcchhHHHHH-HHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhcCcccCCc
Confidence            77766543 345899999975432        12221 1221111 12467888999999999999999999874 5689


Q ss_pred             EEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCC-----------CcccccChHHHHHHcCCCCCC-CHHHHH
Q 044498          256 LNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-----------VRGRNSDDTLINEELGWAPTM-KQKDEL  318 (366)
Q Consensus       256 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~k~~~~lG~~p~~-~~~e~l  318 (366)
                      ||+++++.+|+.|+++.|.+.+|.+..+ ..|....           ......+++|++ ++||+|++ +++|++
T Consensus       220 ~~~~~~~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       220 VNATAPEPVRNKEFAKALARALHRPAFF-PVPAFVLRALLGEMADLLLKGQRVLPEKLL-EAGFQFQYPDLDEAL  292 (292)
T ss_pred             eEecCCCccCHHHHHHHHHHHhCCCCcC-cCCHHHHHHHhchhhHHHhCCcccccHHHH-hcCCeeeCcChhhcC
Confidence            9999999999999999999999976432 2332110           123446788886 59999999 587763

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=3.7e-28  Score=235.82  Aligned_cols=244  Identities=14%  Similarity=0.072  Sum_probs=180.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------------------------cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------------------------DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------------------------~~   74 (366)
                      .+++|||||||||||++|++.|+..+.++.      +|+++.|.+......                           ..
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~------~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~   83 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVK------KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS   83 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCC------EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence            668999999999999999999998653310      178887765421100                           01


Q ss_pred             ccceEEEccCCC-------hhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEE
Q 044498           75 FCHEFHLVDLRV-------MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFF  146 (366)
Q Consensus        75 ~~v~~~~~D~~~-------~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I  146 (366)
                      .+++++.+|+++       .+.+..+++++|+|||+|+.+..    ..++...+.+|+.++.+++++|++. +++  +||
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k--~~V  157 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF----DERYDVALGINTLGALNVLNFAKKCVKVK--MLL  157 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC----cCCHHHHHHHHHHHHHHHHHHHHhcCCCC--eEE
Confidence            457899999983       44466777899999999997752    3466778999999999999999986 688  999


Q ss_pred             EEecccccCCCCCC--CCCcccccC------------------------------------------C---CCCCCCchH
Q 044498          147 FVSSACIYPEFKQL--DTDVKESEA------------------------------------------W---PAEPQDAYG  179 (366)
Q Consensus       147 ~~SS~~vyg~~~~~--~~~~~e~~~------------------------------------------~---~~~p~~~Y~  179 (366)
                      |+||.++||...+.  ..++++.+.                                          .   ...+.+.|+
T Consensus       158 ~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~  237 (491)
T PLN02996        158 HVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYV  237 (491)
T ss_pred             EEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchH
Confidence            99999999875421  000110000                                          0   112346799


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCCcH------------------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEKAP------------------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~~~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                      .+|+++|+++..++.  +++++++|+..+                  ..++..+.. +....+++++++.+|++||+|++
T Consensus       238 ~TK~~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~-g~~~~~~gdg~~~~D~v~Vddvv  314 (491)
T PLN02996        238 FTKAMGEMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGK-GKLTCFLADPNSVLDVIPADMVV  314 (491)
T ss_pred             hhHHHHHHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhcc-ceEeEEecCCCeecceecccHHH
Confidence            999999999988754  899999986433                  112222233 55556779999999999999999


Q ss_pred             HHHHHHHhcC-----CCCcEEecCC--CcccHHHHHHHHHHhcCCC
Q 044498          242 EGVLRLIKSD-----FREPLNIGSD--EMVSINEMAEIILSFENEK  280 (366)
Q Consensus       242 ~~~~~~l~~~-----~~~~~~i~~~--~~~s~~el~~~i~~~~g~~  280 (366)
                      ++++.++...     .+++||++++  .++|+.|+++.+.+..+.-
T Consensus       315 ~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        315 NAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             HHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence            9999988642     3578999998  8999999999999988753

>PLN02583 cinnamoyl-CoA reductase

Probab=99.96  E-value=1.3e-27  Score=219.10  Aligned_cols=269  Identities=12%  Similarity=0.005  Sum_probs=186.7

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----cc---ccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----ME---DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~---~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +.+++|||||||||||++++++|+++|++         |+++.|+.....     ..   ...+++++.+|++|.+.+.+
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~---------V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~   74 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYT---------VHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILD   74 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCE---------EEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHH
Confidence            34678999999999999999999999999         999988532110     10   12246889999999999999


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCC---CCCCCCccccc
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEF---KQLDTDVKESE  168 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~---~~~~~~~~e~~  168 (366)
                      ++.++|.|+|+++...   ....+....++.|+.++.++++++.+. +++  |||++||...++..   .....+++|+.
T Consensus        75 ~l~~~d~v~~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~--riV~~SS~~a~~~~~~~~~~~~~~~E~~  149 (297)
T PLN02583         75 ALKGCSGLFCCFDPPS---DYPSYDEKMVDVEVRAAHNVLEACAQTDTIE--KVVFTSSLTAVIWRDDNISTQKDVDERS  149 (297)
T ss_pred             HHcCCCEEEEeCccCC---cccccHHHHHHHHHHHHHHHHHHHHhcCCcc--EEEEecchHheecccccCCCCCCCCccc
Confidence            9999999999876432   111234678999999999999999887 588  99999998764311   11111234443


Q ss_pred             CCCC----CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHH-HH---HHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          169 AWPA----EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAA-FS---RKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       169 ~~~~----~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~-~~---~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                      +.+.    .+...|+.+|..+|+.+..+++..+++++++|+..+.. ..   ...+. +. ....++  ..++|+|++|+
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~-~~-~~~~~~--~~~~~v~V~Dv  225 (297)
T PLN02583        150 WSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLK-GA-AQMYEN--GVLVTVDVNFL  225 (297)
T ss_pred             CCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhc-CC-cccCcc--cCcceEEHHHH
Confidence            2111    12237999999999999999888899999998654311 00   11222 21 122222  34679999999


Q ss_pred             HHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCc--CCCCCCCcccccChHHHHHHcCCC
Q 044498          241 VEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHP--IPGPEGVRGRNSDDTLINEELGWA  309 (366)
Q Consensus       241 a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~--~~~~~~~~~~~~~~~k~~~~lG~~  309 (366)
                      |++++.+++.+ .++.|.++++....+.++++++.+.++.- ++..  ...........++++|++ +||++
T Consensus       226 a~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~k~~-~l~~~  295 (297)
T PLN02583        226 VDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLI-PSPPPYEMQGSEVYQQRIRNKKLN-KLMED  295 (297)
T ss_pred             HHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCC-CCCCcccccCCCccccccChHHHH-HhCcc
Confidence            99999999875 45678888766556788999999987642 2211  111122344568889984 48875

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=2.2e-27  Score=224.78  Aligned_cols=230  Identities=17%  Similarity=0.185  Sum_probs=182.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--------ccccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .++|+|||||||||||++++++|+++|++         |++++|+.....        .....+++++.+|++|++.+.+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~---------V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~  128 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYN---------VVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRK  128 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHH
Confidence            36789999999999999999999999999         999998764321        0112357899999999999999


Q ss_pred             hhc----CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           93 MTS----GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        93 ~~~----~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      +++    ++|+||||++...      ......+++|..++.++++++++.+++  |||++||.++|+             
T Consensus       129 ~~~~~~~~~D~Vi~~aa~~~------~~~~~~~~vn~~~~~~ll~aa~~~gv~--r~V~iSS~~v~~-------------  187 (390)
T PLN02657        129 VLFSEGDPVDVVVSCLASRT------GGVKDSWKIDYQATKNSLDAGREVGAK--HFVLLSAICVQK-------------  187 (390)
T ss_pred             HHHHhCCCCcEEEECCccCC------CCCccchhhHHHHHHHHHHHHHHcCCC--EEEEEeeccccC-------------
Confidence            887    5999999988422      123345788999999999999999999  999999987653             


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH----HHHHHHHhCCCCeEEecCCccee-eeeeHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA----AFSRKAVTSTDNFEMWGDGKQTR-SLTFIDECVEG  243 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~----~~~~~~~~~~~~~~i~~~~~~~~-~~i~v~D~a~~  243 (366)
                           |...|..+|...|..+..  ...+++++++|+..+.    .++..+. ++.++.+++++...+ ++||++|+|++
T Consensus       188 -----p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~~~~~~~~-~g~~~~~~GdG~~~~~~~I~v~DlA~~  259 (390)
T PLN02657        188 -----PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLGGQVEIVK-DGGPYVMFGDGKLCACKPISEADLASF  259 (390)
T ss_pred             -----cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccHHHHHhhc-cCCceEEecCCcccccCceeHHHHHHH
Confidence                 233588899999988865  3468999999975443    2333333 367777788887655 57999999999


Q ss_pred             HHHHHhcC--CCCcEEecCC-CcccHHHHHHHHHHhcCCCCCCCcCCC
Q 044498          244 VLRLIKSD--FREPLNIGSD-EMVSINEMAEIILSFENEKLPIHPIPG  288 (366)
Q Consensus       244 ~~~~l~~~--~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~  288 (366)
                      +..++..+  .+++||++++ +.+|+.|+++.+.+.+|++.++...|.
T Consensus       260 i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~  307 (390)
T PLN02657        260 IADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPI  307 (390)
T ss_pred             HHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCH
Confidence            99998654  5789999985 689999999999999998876665553

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=6.4e-27  Score=237.07  Aligned_cols=262  Identities=17%  Similarity=0.190  Sum_probs=192.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      ++||||||||+||||++|++.|.++|++         |..                  ..+|++|.+.+.+.+.  ++|+
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~---------v~~------------------~~~~l~d~~~v~~~i~~~~pd~  431 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIA---------YEY------------------GKGRLEDRSSLLADIRNVKPTH  431 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCe---------EEe------------------eccccccHHHHHHHHHhhCCCE
Confidence            5679999999999999999999999988         631                  1246778888877775  7999


Q ss_pred             EEEcccccCCc--cccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC----CCCCCcccccCCCCC
Q 044498          100 MSNLAADMGGM--GFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK----QLDTDVKESEAWPAE  173 (366)
Q Consensus       100 vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~----~~~~~~~e~~~~~~~  173 (366)
                      |||||+.++.+  ..+..++...+.+|+.++.+|+++|++.+++   +|++||.++|+...    ....++.|++  ++.
T Consensus       432 Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~---~v~~Ss~~v~~~~~~~~~~~~~p~~E~~--~~~  506 (668)
T PLN02260        432 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL---MMNFATGCIFEYDAKHPEGSGIGFKEED--KPN  506 (668)
T ss_pred             EEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe---EEEEcccceecCCcccccccCCCCCcCC--CCC
Confidence            99999987532  2345677888999999999999999999985   67888888986432    1111235554  344


Q ss_pred             -CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC---cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHh
Q 044498          174 -PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK---APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK  249 (366)
Q Consensus       174 -p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  249 (366)
                       |.+.|+.+|+++|+++..+.+.+.+++.+++..   ...+|+..+++....+.+ +     .+..+++|++.+++.+++
T Consensus       507 ~~~~~Yg~sK~~~E~~~~~~~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~v-p-----~~~~~~~~~~~~~~~l~~  580 (668)
T PLN02260        507 FTGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNI-P-----NSMTVLDELLPISIEMAK  580 (668)
T ss_pred             CCCChhhHHHHHHHHHHHhhhhheEEEEEEecccCCCCccHHHHHHhccceeecc-C-----CCceehhhHHHHHHHHHH
Confidence             458999999999999998876666666666432   246788888764443333 1     235778999999888887


Q ss_pred             cCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcC---CCC----CCCcccccChHHHHHHcCCCCCCCHHHHHHHHH
Q 044498          250 SDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPI---PGP----EGVRGRNSDDTLINEELGWAPTMKQKDELRITY  322 (366)
Q Consensus       250 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~---~~~----~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~  322 (366)
                      ...+++||++++..+|+.|+++.|.+.++....+..+   ..+    ...+...+|++|+++.+|. +. +++++|.+++
T Consensus       581 ~~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~~l~~~k~~~~~~~-~~-~~~~~l~~~~  658 (668)
T PLN02260        581 RNLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPE-LL-SIKESLIKYV  658 (668)
T ss_pred             hCCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccccccHHHHHHhCcc-cc-chHHHHHHHH
Confidence            6667999999999999999999999987422111111   111    1112237999999988888 54 8889888776


Q ss_pred             H
Q 044498          323 F  323 (366)
Q Consensus       323 ~  323 (366)
                      .
T Consensus       659 ~  659 (668)
T PLN02260        659 F  659 (668)
T ss_pred             h
Confidence            4

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=1.4e-25  Score=211.44  Aligned_cols=239  Identities=17%  Similarity=0.148  Sum_probs=175.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccc----------------c-ccccceEEEccCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMM----------------E-DMFCHEFHLVDLR   85 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~----------------~-~~~~v~~~~~D~~   85 (366)
                      +|||||||||||++|+++|+++|  .+         |+++.|.......                . ...+++++.+|++
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~---------V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~   71 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAK---------VICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLS   71 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCE---------EEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcC
Confidence            58999999999999999999998  56         9999887652100                0 0035789999997


Q ss_pred             Ch------hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC
Q 044498           86 VM------DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        86 ~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++      +.+..+.+++|+|||+|+.+..    ..........|+.++.++++++.+.+++  +|||+||.++|+....
T Consensus        72 ~~~~gl~~~~~~~~~~~~d~vih~a~~~~~----~~~~~~~~~~nv~g~~~ll~~a~~~~~~--~~v~iSS~~v~~~~~~  145 (367)
T TIGR01746        72 EPRLGLSDAEWERLAENVDTIVHNGALVNW----VYPYSELRAANVLGTREVLRLAASGRAK--PLHYVSTISVLAAIDL  145 (367)
T ss_pred             cccCCcCHHHHHHHHhhCCEEEeCCcEecc----CCcHHHHhhhhhHHHHHHHHHHhhCCCc--eEEEEccccccCCcCC
Confidence            54      4566666789999999997641    2344566789999999999999999988  8999999999987543


Q ss_pred             CCCCcccccCC---CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH-----------HHHHHHHhCCCCeEEe
Q 044498          160 LDTDVKESEAW---PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA-----------AFSRKAVTSTDNFEMW  225 (366)
Q Consensus       160 ~~~~~~e~~~~---~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~-----------~~~~~~~~~~~~~~i~  225 (366)
                      .+.  .|++..   ...+.+.|+.+|+.+|.++..+... +++++++|+..+.           .++..++........+
T Consensus       146 ~~~--~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~  222 (367)
T TIGR01746       146 STV--TEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY  222 (367)
T ss_pred             CCc--cccccccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC
Confidence            321  333321   1234578999999999999887665 8999999754321           2222222110011122


Q ss_pred             cCCc-ceeeeeeHHHHHHHHHHHHhcCC----CCcEEecCCCcccHHHHHHHHHHhcCCCCC
Q 044498          226 GDGK-QTRSLTFIDECVEGVLRLIKSDF----REPLNIGSDEMVSINEMAEIILSFENEKLP  282 (366)
Q Consensus       226 ~~~~-~~~~~i~v~D~a~~~~~~l~~~~----~~~~~i~~~~~~s~~el~~~i~~~~g~~~~  282 (366)
                      +... ...+++|++|+++++..++..+.    +++||+++++++++.|+++.+.+ .|.+..
T Consensus       223 p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~  283 (367)
T TIGR01746       223 PDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK  283 (367)
T ss_pred             CCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence            2333 35679999999999999987653    68999999999999999999999 787644

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.94  E-value=2.7e-25  Score=186.85  Aligned_cols=290  Identities=17%  Similarity=0.172  Sum_probs=222.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------------cccccceEEEccCCChhHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------------EDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------------~~~~~v~~~~~D~~~~~~l   90 (366)
                      .+..||||-||.=|++|++.|+.+|++         |.++-|.......            .........-+|++|...+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYe---------VHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L   98 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYE---------VHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCL   98 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCce---------eeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHH
Confidence            356899999999999999999999999         9998776543211            1223457888999999999


Q ss_pred             Hhhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccc
Q 044498           91 LRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        91 ~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      .+++.  +++-|+|+|+.++. ..+.+-++...++...|+.+||+|.+.++ .+..||.-.||...||.....    +.+
T Consensus        99 ~k~I~~ikPtEiYnLaAQSHV-kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~----PQs  173 (376)
T KOG1372|consen   99 IKLISTIKPTEVYNLAAQSHV-KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEI----PQS  173 (376)
T ss_pred             HHHHhccCchhhhhhhhhcce-EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCC----Ccc
Confidence            99886  68999999998764 34455566678888999999999999886 222479999999999987655    445


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcE---EEe------C-CCcHHHHHHHHH----hCCCCeEEecCCcceee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC---RLV------G-EKAPAAFSRKAV----TSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~---~i~------r-~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~  233 (366)
                      +.+|..|.++|+.+|..+-.++..|...+++-.   +.+      | .+++.+-+.+.+    .+.+.....|+-+..||
T Consensus       174 E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RD  253 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRD  253 (376)
T ss_pred             cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcc
Confidence            566999999999999999988888888887532   222      1 234433333322    22333333488899999


Q ss_pred             eeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcC------------------CC---CCCC
Q 044498          234 LTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPI------------------PG---PEGV  292 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~------------------~~---~~~~  292 (366)
                      |-|..|.+++++.+|+++...-|-++.|+..|++|+.+.-...+|....+.-.                  |.   |...
T Consensus       254 WGhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEV  333 (376)
T KOG1372|consen  254 WGHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEV  333 (376)
T ss_pred             cchhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchh
Confidence            99999999999999999999999999999999999999988888865443311                  10   1222


Q ss_pred             cccccChHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 044498          293 RGRNSDDTLINEELGWAPTMKQKDELRITYFWIK  326 (366)
Q Consensus       293 ~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~  326 (366)
                      .....|.+|+++.|||.|+.++++.+++|+..=.
T Consensus       334 d~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~Di  367 (376)
T KOG1372|consen  334 DTLQGDASKAKKTLGWKPKVTFPELVKEMVASDI  367 (376)
T ss_pred             hhhcCChHHHHHhhCCCCccCHHHHHHHHHHhHH
Confidence            3335689999999999999999999999987533

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.94  E-value=7.3e-26  Score=200.51  Aligned_cols=222  Identities=21%  Similarity=0.172  Sum_probs=170.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccc--------ccccc----eEEEccCCChhHHHh
Q 044498           26 ISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMME--------DMFCH----EFHLVDLRVMDNCLR   92 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v----~~~~~D~~~~~~l~~   92 (366)
                      ||||||+|.||+.|+++|++.+ ..         +++++++.......        ...++    ..+.+|+.|.+.+..
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~---------lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~   71 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKK---------LILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNR   71 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SE---------EEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCe---------EEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHH
Confidence            7999999999999999999987 46         99999986532111        11123    345899999999999


Q ss_pred             hhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           93 MTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        93 ~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      +++  ++|+|||.|++.+. ..++.++.+.+.+|+.|+.|++++|.+++++  +||++||..                  
T Consensus        72 ~~~~~~pdiVfHaAA~KhV-pl~E~~p~eav~tNv~GT~nv~~aa~~~~v~--~~v~ISTDK------------------  130 (293)
T PF02719_consen   72 IFEEYKPDIVFHAAALKHV-PLMEDNPFEAVKTNVLGTQNVAEAAIEHGVE--RFVFISTDK------------------  130 (293)
T ss_dssp             HTT--T-SEEEE------H-HHHCCCHHHHHHHHCHHHHHHHHHHHHTT-S--EEEEEEECG------------------
T ss_pred             HHhhcCCCEEEEChhcCCC-ChHHhCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEccccc------------------
Confidence            998  89999999998874 4788899999999999999999999999999  999999942                  


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEe--------CCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLV--------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~--------r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                      ..+|.+.||.+|+.+|+++..+....   +..++++        |+.+++-|..++.+ ++++++. +++..|-|..+++
T Consensus       131 Av~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~-g~PlTvT-~p~mtRffmti~E  208 (293)
T PF02719_consen  131 AVNPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKN-GGPLTVT-DPDMTRFFMTIEE  208 (293)
T ss_dssp             CSS--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHT-TSSEEEC-ETT-EEEEE-HHH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHc-CCcceeC-CCCcEEEEecHHH
Confidence            34688999999999999999987765   4556666        46778888888887 7899884 5678899999999


Q ss_pred             HHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCC
Q 044498          240 CVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENE  279 (366)
Q Consensus       240 ~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~  279 (366)
                      .++.++.++... .+++|-+--|+++++.|+++.+.+..|.
T Consensus       209 Av~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  209 AVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             HHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred             HHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhccc
Confidence            999999998775 6788988888999999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.93  E-value=1.3e-24  Score=186.93  Aligned_cols=270  Identities=15%  Similarity=0.132  Sum_probs=183.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc-CCCEEEEcc
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-GVDNMSNLA  104 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-~~d~vi~~a  104 (366)
                      |+|||||||||++|+.+|.+.||+         |++++|++.......+..+.       ..+.+..... ++|+|||+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~---------v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLA   64 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQ---------VTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLA   64 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCe---------EEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECC
Confidence            689999999999999999999999         99999998776555432222       2233444444 799999999


Q ss_pred             cccCCcc-ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          105 ADMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       105 ~~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      |..=..+ +.....+.+.+.-+..|..|.++..+...++-.+|-.|....||.......  +|++   ..+.++  .+++
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~--tE~~---~~g~~F--la~l  137 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVV--TEES---PPGDDF--LAQL  137 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceee--ecCC---CCCCCh--HHHH
Confidence            9763333 444445667888899999999999865433115777777888999876543  5552   222333  3333


Q ss_pred             HHHHHHHH-HHHHcCCcEEEeCCC--------cHHHHHHHHHhC-CCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-C
Q 044498          184 ATEGLCKH-YTKDFEIECRLVGEK--------APAAFSRKAVTS-TDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-F  252 (366)
Q Consensus       184 ~~E~~l~~-~~~~~~~~~~i~r~~--------~~~~~~~~~~~~-~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~  252 (366)
                      +...--.. .++..+.+++++|.+        .+..++.-.... |.+   .|+|+|+.+|||++|+++++.+++++. -
T Consensus       138 c~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~---~GsGrQ~~SWIhieD~v~~I~fll~~~~l  214 (297)
T COG1090         138 CQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGK---LGSGRQWFSWIHIEDLVNAILFLLENEQL  214 (297)
T ss_pred             HHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCc---cCCCCceeeeeeHHHHHHHHHHHHhCcCC
Confidence            33322111 133447888888633        334443333221 222   389999999999999999999999995 6


Q ss_pred             CCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-----C-Cccccc-----ChHHHHHHcCCCCCC-CHHHHHHH
Q 044498          253 REPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-----G-VRGRNS-----DDTLINEELGWAPTM-KQKDELRI  320 (366)
Q Consensus       253 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~-~~~~~~-----~~~k~~~~lG~~p~~-~~~e~l~~  320 (366)
                      .+.||++.+.+++..++...+.++++++.... +|.-.     + ....++     =..|+ ...||..++ +++++|.+
T Consensus       215 sGp~N~taP~PV~~~~F~~al~r~l~RP~~~~-vP~~~~rl~LGe~a~~lL~gQrvlP~kl-~~aGF~F~y~dl~~AL~~  292 (297)
T COG1090         215 SGPFNLTAPNPVRNKEFAHALGRALHRPAILP-VPSFALRLLLGEMADLLLGGQRVLPKKL-EAAGFQFQYPDLEEALAD  292 (297)
T ss_pred             CCcccccCCCcCcHHHHHHHHHHHhCCCcccc-CcHHHHHHHhhhhHHHHhccchhhHHHH-HHCCCeeecCCHHHHHHH
Confidence            89999999999999999999999999864332 22100     0 011122     23444 446998877 78888887


Q ss_pred             HHH
Q 044498          321 TYF  323 (366)
Q Consensus       321 ~~~  323 (366)
                      .+.
T Consensus       293 il~  295 (297)
T COG1090         293 ILK  295 (297)
T ss_pred             HHh
Confidence            664

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.3e-23  Score=197.47  Aligned_cols=226  Identities=22%  Similarity=0.215  Sum_probs=192.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------c--ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------E--DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~--~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++||||||+|-||+.+++++++.+-..        ++.++|+......      .  ....+.++.+|+.|.+.+.++
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~--------i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~  320 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKE--------IILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERA  320 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCE--------EEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHH
Confidence            77899999999999999999999987431        8888887653211      1  135568999999999999999


Q ss_pred             hcC--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           94 TSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        94 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      +++  +|+|+|.|++.+.| .++.+|.+.+..|+.||.|++++|.+++++  +||++||..                  .
T Consensus       321 ~~~~kvd~VfHAAA~KHVP-l~E~nP~Eai~tNV~GT~nv~~aa~~~~V~--~~V~iSTDK------------------A  379 (588)
T COG1086         321 MEGHKVDIVFHAAALKHVP-LVEYNPEEAIKTNVLGTENVAEAAIKNGVK--KFVLISTDK------------------A  379 (588)
T ss_pred             HhcCCCceEEEhhhhccCc-chhcCHHHHHHHhhHhHHHHHHHHHHhCCC--EEEEEecCc------------------c
Confidence            987  99999999998854 889999999999999999999999999999  999999942                  4


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHcC---CcEEEe--------CCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          172 AEPQDAYGLEKLATEGLCKHYTKDFE---IECRLV--------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       172 ~~p~~~Y~~sK~~~E~~l~~~~~~~~---~~~~i~--------r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                      .+|.|.||.+|+.+|..+..+..+..   -.+..+        |+.+++-|-.++.+ |+++++ -+++..|-|..+.|.
T Consensus       380 V~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~-GgplTv-Tdp~mtRyfMTI~EA  457 (588)
T COG1086         380 VNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAE-GGPLTV-TDPDMTRFFMTIPEA  457 (588)
T ss_pred             cCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHc-CCCccc-cCCCceeEEEEHHHH
Confidence            57899999999999999999877443   455555        45667777777776 789888 467888999999999


Q ss_pred             HHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcC
Q 044498          241 VEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFEN  278 (366)
Q Consensus       241 a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g  278 (366)
                      ++.++++.... .+++|-+.-|+++.+.|+++.+.+..|
T Consensus       458 v~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         458 VQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            99999998775 678899988999999999999999998

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.92  E-value=2.5e-23  Score=189.76  Aligned_cols=209  Identities=14%  Similarity=0.103  Sum_probs=155.9

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh------cC-C
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT------SG-V   97 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~------~~-~   97 (366)
                      +||||||||+||++++++|+++|++         |++++|++....   ..+++.+.+|+.|++.+..++      ++ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~---------V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVP---------FLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCc---------EEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence            4999999999999999999999999         999999876432   235688899999999999988      57 9


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA  177 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~  177 (366)
                      |.|+|+++...       +       ......+++++|++.|++  |||++||..++..   .                 
T Consensus        69 d~v~~~~~~~~-------~-------~~~~~~~~i~aa~~~gv~--~~V~~Ss~~~~~~---~-----------------  112 (285)
T TIGR03649        69 SAVYLVAPPIP-------D-------LAPPMIKFIDFARSKGVR--RFVLLSASIIEKG---G-----------------  112 (285)
T ss_pred             eEEEEeCCCCC-------C-------hhHHHHHHHHHHHHcCCC--EEEEeeccccCCC---C-----------------
Confidence            99999987321       1       134557899999999999  9999998644211   0                 


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHH-HHHH----HHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLVGEKAPAA-FSRK----AVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~-~~~~----~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                        ..+...|.+++.   ..+++++++|+..+.. +...    .+.+...+ +.+.++..++|++++|+|+++..++..+ 
T Consensus       113 --~~~~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~~~  186 (285)
T TIGR03649       113 --PAMGQVHAHLDS---LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYRALTDKV  186 (285)
T ss_pred             --chHHHHHHHHHh---ccCCCEEEEeccHHhhhhcccccccccccCCeE-EecCCCCccCcccHHHHHHHHHHHhcCCC
Confidence              012223333322   1389999999874432 2111    11112222 3355677889999999999999999875 


Q ss_pred             -CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          252 -FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       252 -~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                       .++.|++.+++.+|+.|+++.+.+.+|++..+...+
T Consensus       187 ~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~  223 (285)
T TIGR03649       187 APNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLT  223 (285)
T ss_pred             cCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCC
Confidence             467899999999999999999999999986655544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.91  E-value=2.6e-24  Score=192.09  Aligned_cols=202  Identities=16%  Similarity=0.139  Sum_probs=126.1

Q ss_pred             EEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccc-----c----c----------cccccceEEEccCCC
Q 044498           28 SIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEH-----M----M----------EDMFCHEFHLVDLRV   86 (366)
Q Consensus        28 ItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~-----~----~----------~~~~~v~~~~~D~~~   86 (366)
                      |||||||+|++|+++|++++.  +         |+++.|..+..     .    .          ....+++++.||+++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~---------I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~   71 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVK---------IYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQ   71 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTE---------EEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTS
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcE---------EEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccc
Confidence            799999999999999999876  6         99999976421     0    0          014578999999998


Q ss_pred             h------hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           87 M------DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        87 ~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +      +.+..+.+++|+|||||+.++    ...+.....+.|+.++.+|++.|.+.+.+  +|+|+||+.+.+.....
T Consensus        72 ~~lGL~~~~~~~L~~~v~~IiH~Aa~v~----~~~~~~~~~~~NV~gt~~ll~la~~~~~~--~~~~iSTa~v~~~~~~~  145 (249)
T PF07993_consen   72 PNLGLSDEDYQELAEEVDVIIHCAASVN----FNAPYSELRAVNVDGTRNLLRLAAQGKRK--RFHYISTAYVAGSRPGT  145 (249)
T ss_dssp             GGGG--HHHHHHHHHH--EEEE--SS-S----BS-S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS-TTT
T ss_pred             cccCCChHHhhccccccceeeecchhhh----hcccchhhhhhHHHHHHHHHHHHHhccCc--ceEEeccccccCCCCCc
Confidence            5      355666678999999999875    23466678999999999999999988777  89999996666655532


Q ss_pred             CC--Cc--cccc-CCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc---------------HHHHHHHHHhCCC
Q 044498          161 DT--DV--KESE-AWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA---------------PAAFSRKAVTSTD  220 (366)
Q Consensus       161 ~~--~~--~e~~-~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~---------------~~~~~~~~~~~~~  220 (366)
                      ..  .+  .+.. +......+.|..||+.+|+++.+++.+.+++++|+|+..               ...++......+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~  225 (249)
T PF07993_consen  146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGA  225 (249)
T ss_dssp             --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-E
T ss_pred             ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCC
Confidence            10  00  1111 123455679999999999999999988899999996421               3444555554333


Q ss_pred             CeEEecCCcceeeeeeHHHHHHHH
Q 044498          221 NFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       221 ~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                      .....++.....++++||.+|++|
T Consensus       226 ~p~~~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  226 FPDLPGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             EES-SB---TT--EEEHHHHHHHH
T ss_pred             cccccCCCCceEeEECHHHHHhhC
Confidence            333445556679999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.91  E-value=5.3e-23  Score=201.37  Aligned_cols=244  Identities=13%  Similarity=0.059  Sum_probs=175.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------cc--------------------cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------ME--------------------DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~--------------------~~   74 (366)
                      .+++|||||||||||++|++.|++.+.++.      +|+++.|.+....       ..                    ..
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~------kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~  191 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVG------KIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML  191 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCc------EEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence            678999999999999999999998764310      1788887643210       00                    02


Q ss_pred             ccceEEEccCCCh------hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEE
Q 044498           75 FCHEFHLVDLRVM------DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFF  147 (366)
Q Consensus        75 ~~v~~~~~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~  147 (366)
                      .++.++.+|++++      +....+.+++|+|||+|+.+..    ..+++..+.+|+.++.+++++|++. +.+  +|||
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f----~~~~~~a~~vNV~GT~nLLelA~~~~~lk--~fV~  265 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF----DERYDVAIDINTRGPCHLMSFAKKCKKLK--LFLQ  265 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc----ccCHHHHHHHHHHHHHHHHHHHHHcCCCC--eEEE
Confidence            3578899999987      3455566789999999997642    3456778999999999999999887 477  8999


Q ss_pred             EecccccCCCCCCC--CCcccc---------------------------------c-CC------------------CCC
Q 044498          148 VSSACIYPEFKQLD--TDVKES---------------------------------E-AW------------------PAE  173 (366)
Q Consensus       148 ~SS~~vyg~~~~~~--~~~~e~---------------------------------~-~~------------------~~~  173 (366)
                      +||++|||...+.-  ..++..                                 + ..                  ...
T Consensus       266 vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~  345 (605)
T PLN02503        266 VSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYG  345 (605)
T ss_pred             ccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCC
Confidence            99999999864210  011100                                 0 00                  001


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH--------HHHHH---------HHhCCCCeEEecCCcceeeeee
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA--------AFSRK---------AVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~--------~~~~~---------~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                      --+.|..+|.++|+++.++..  +++++|+|+..+.        .++..         ....|.--.+.++++...|+|+
T Consensus       346 ~pNtYt~TK~lAE~lV~~~~~--~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVP  423 (605)
T PLN02503        346 WQDTYVFTKAMGEMVINSMRG--DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVP  423 (605)
T ss_pred             CCChHHHHHHHHHHHHHHhcC--CCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEe
Confidence            137899999999999987653  7999999876541        11111         1112322235678889999999


Q ss_pred             HHHHHHHHHHHHhc------CCCCcEEecCC--CcccHHHHHHHHHHhcCC
Q 044498          237 IDECVEGVLRLIKS------DFREPLNIGSD--EMVSINEMAEIILSFENE  279 (366)
Q Consensus       237 v~D~a~~~~~~l~~------~~~~~~~i~~~--~~~s~~el~~~i~~~~g~  279 (366)
                      ||.++.+++.+...      ...++||++++  +++++.++++.+.+++..
T Consensus       424 VD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        424 ADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             ecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            99999999988421      14689999988  899999999999887653

>PRK12320 hypothetical protein; Provisional

Probab=99.91  E-value=1.3e-22  Score=200.80  Aligned_cols=229  Identities=13%  Similarity=0.089  Sum_probs=163.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      ||||||||+||||++|+++|+++|++         |++++|.....   ...+++++.+|+++.. +.+++.++|+|||+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~---------Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHL   67 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHT---------VSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHL   67 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE---------EEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEc
Confidence            58999999999999999999999999         99999865432   1235689999999985 77778899999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      |+...      .   .....|+.++.+++++|++.++   |+||+||.  ||...                  .|.    
T Consensus        68 Aa~~~------~---~~~~vNv~Gt~nLleAA~~~Gv---RiV~~SS~--~G~~~------------------~~~----  111 (699)
T PRK12320         68 APVDT------S---APGGVGITGLAHVANAAARAGA---RLLFVSQA--AGRPE------------------LYR----  111 (699)
T ss_pred             CccCc------c---chhhHHHHHHHHHHHHHHHcCC---eEEEEECC--CCCCc------------------ccc----
Confidence            98531      1   1225799999999999999986   69999985  33210                  121    


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCCc---------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCCCC
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEKA---------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFRE  254 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  254 (366)
                      .+|.++..    ++++++++|...         ...++..++...    .  .+ +...++|++|++++++.+++.+..+
T Consensus       112 ~aE~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~----~--~~-~pI~vIyVdDvv~alv~al~~~~~G  180 (699)
T PRK12320        112 QAETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSK----V--SA-RPIRVLHLDDLVRFLVLALNTDRNG  180 (699)
T ss_pred             HHHHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHH----H--cC-CceEEEEHHHHHHHHHHHHhCCCCC
Confidence            35665543    468888886321         123344433210    0  11 1233589999999999999876667


Q ss_pred             cEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHHHHHcCCCCCCCHHH
Q 044498          255 PLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKD  316 (366)
Q Consensus       255 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~e  316 (366)
                      +||+++++.+|+.|+++++..... ...+.  + .........+...++..++|.|+..++.
T Consensus       181 iyNIG~~~~~Si~el~~~i~~~~p-~~~~~--~-~~~~~~~~pdi~~a~~~~~w~~~~~~~~  238 (699)
T PRK12320        181 VVDLATPDTTNVVTAWRLLRSVDP-HLRTR--R-VRSWEQLIPEVDIAAVQEDWNFEFGWQA  238 (699)
T ss_pred             EEEEeCCCeeEHHHHHHHHHHhCC-Ccccc--c-cccHHHhCCCCchhhhhcCCCCcchHHH
Confidence            999999999999999999977622 11111  1 1223345667778888899999987654

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.88  E-value=1.5e-21  Score=174.60  Aligned_cols=226  Identities=13%  Similarity=0.028  Sum_probs=157.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCC-hhHHHhhh-cCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRV-MDNCLRMT-SGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~-~~~l~~~~-~~~   97 (366)
                      ++|+||||||||+||++++++|+++|++         |+++.|+..+....  ...+++++.+|+++ .+.+.+.+ .++
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~   86 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFA---------VKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDS   86 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCE---------EEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCC
Confidence            6789999999999999999999999999         99998876542211  12357899999998 46677777 689


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA  177 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~  177 (366)
                      |+|||+++...     ..++...+..|..++.++++++++.+++  ||||+||.++||.....+.  .+.. ...++...
T Consensus        87 d~vi~~~g~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~iV~iSS~~v~g~~~~~~~--~~~~-~~~~~~~~  156 (251)
T PLN00141         87 DAVICATGFRR-----SFDPFAPWKVDNFGTVNLVEACRKAGVT--RFILVSSILVNGAAMGQIL--NPAY-IFLNLFGL  156 (251)
T ss_pred             CEEEECCCCCc-----CCCCCCceeeehHHHHHHHHHHHHcCCC--EEEEEccccccCCCccccc--Ccch-hHHHHHHH
Confidence            99999988532     1123334578899999999999999998  9999999999986433221  1100 01112233


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCc
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREP  255 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~  255 (366)
                      |...|..+|.+++.    .+++++++|+..+..-   . . ...+.+.........+++.+|+|+++..++..+  ...+
T Consensus       157 ~~~~k~~~e~~l~~----~gi~~~iirpg~~~~~---~-~-~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~  227 (251)
T PLN00141        157 TLVAKLQAEKYIRK----SGINYTIVRPGGLTND---P-P-TGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKV  227 (251)
T ss_pred             HHHHHHHHHHHHHh----cCCcEEEEECCCccCC---C-C-CceEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcE
Confidence            44567777776553    4899999998754311   0 1 112222221112235799999999999998775  3567


Q ss_pred             EEecC---CCcccHHHHHHHHHH
Q 044498          256 LNIGS---DEMVSINEMAEIILS  275 (366)
Q Consensus       256 ~~i~~---~~~~s~~el~~~i~~  275 (366)
                      +.+.+   +...++.++...+.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        228 VEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             EEEecCCCCCchhHHHHHHHhhc
Confidence            77775   335889999888764

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.88  E-value=2.9e-21  Score=161.60  Aligned_cols=294  Identities=15%  Similarity=0.152  Sum_probs=220.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh--cCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT--SGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~--~~~d   98 (366)
                      ...||||||+-|.+|..++..|..+ |.++        |+.-+-.++...-....  .++-.|+.|...++++.  ..+|
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~--------VILSDI~KPp~~V~~~G--PyIy~DILD~K~L~eIVVn~RId  112 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSEC--------VILSDIVKPPANVTDVG--PYIYLDILDQKSLEEIVVNKRID  112 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCcc--------EehhhccCCchhhcccC--CchhhhhhccccHHHhhcccccc
Confidence            3458999999999999999988765 6552        77666444433222221  68889999999999976  3699


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCch
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAY  178 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y  178 (366)
                      .+||+.+.-+.  ..+.+......+|+.|..|+++.|++++.+   +..-||.+.||......   +.-+-+-..|.+.|
T Consensus       113 WL~HfSALLSA--vGE~NVpLA~~VNI~GvHNil~vAa~~kL~---iFVPSTIGAFGPtSPRN---PTPdltIQRPRTIY  184 (366)
T KOG2774|consen  113 WLVHFSALLSA--VGETNVPLALQVNIRGVHNILQVAAKHKLK---VFVPSTIGAFGPTSPRN---PTPDLTIQRPRTIY  184 (366)
T ss_pred             eeeeHHHHHHH--hcccCCceeeeecchhhhHHHHHHHHcCee---EeecccccccCCCCCCC---CCCCeeeecCceee
Confidence            99999887653  446677788999999999999999999984   67789999999865432   11122346799999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEeCCCc--------------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          179 GLEKLATEGLCKHYTKDFEIECRLVGEKA--------------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       179 ~~sK~~~E~~l~~~~~~~~~~~~i~r~~~--------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                      |.||..+|.+-+.+..++++++..+|...              -......+++ ..+..++-.++......|..|+-+++
T Consensus       185 GVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~-~gk~tCylrpdtrlpmmy~~dc~~~~  263 (366)
T KOG2774|consen  185 GVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQ-KGKHTCYLRPDTRLPMMYDTDCMASV  263 (366)
T ss_pred             chhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHH-cCCcccccCCCccCceeehHHHHHHH
Confidence            99999999999999999999998885221              2334455565 34445666677788899999999999


Q ss_pred             HHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhcC-CCCCCCcCCC--CCCCcccccChHHHHHHcCCCCCCCHHHH
Q 044498          245 LRLIKSD----FREPLNIGSDEMVSINEMAEIILSFEN-EKLPIHPIPG--PEGVRGRNSDDTLINEELGWAPTMKQKDE  317 (366)
Q Consensus       245 ~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g-~~~~~~~~~~--~~~~~~~~~~~~k~~~~lG~~p~~~~~e~  317 (366)
                      +.++..+    ..++||++ +.+++..|+++.+.+.+. ....+.....  ..+..+..+|.+.+++++.|+..+.+...
T Consensus       264 ~~~~~a~~~~lkrr~ynvt-~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~  342 (366)
T KOG2774|consen  264 IQLLAADSQSLKRRTYNVT-GFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSI  342 (366)
T ss_pred             HHHHhCCHHHhhhheeeec-eeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHH
Confidence            9998765    57899997 578999999999998873 3322222111  11233446899999999999999998888


Q ss_pred             HHHHHHHHHHHHHHhhhc
Q 044498          318 LRITYFWIKEQVEKEKAQ  335 (366)
Q Consensus       318 l~~~~~~~~~~~~~~~~~  335 (366)
                      +.-++.-.++|....+++
T Consensus       343 i~~~i~~~~~n~~~~~p~  360 (366)
T KOG2774|consen  343 ISTVVAVHKSNLKLLKPQ  360 (366)
T ss_pred             HHHHHHHHHhhhhhcChh
Confidence            888888888887655554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.87  E-value=2.8e-22  Score=180.57  Aligned_cols=232  Identities=13%  Similarity=0.061  Sum_probs=160.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccc---------c-------cccccceEEEccCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHM---------M-------EDMFCHEFHLVDLRV   86 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~---------~-------~~~~~v~~~~~D~~~   86 (366)
                      ++||+||||||+|.+|+++|+.+- .+         |+++.|..+...         .       ....+++.+.+|+..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~k---------v~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e   71 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAK---------VICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAE   71 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCc---------EEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEeccccc
Confidence            479999999999999999999874 36         999998776211         1       123468999999985


Q ss_pred             h------hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           87 M------DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        87 ~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +      ..+.++.+.+|.|||+|+.++    ...++..+...|+.|+..+++.|...+.|  .|+|+||.+|+......
T Consensus        72 ~~lGL~~~~~~~La~~vD~I~H~gA~Vn----~v~pYs~L~~~NVlGT~evlrLa~~gk~K--p~~yVSsisv~~~~~~~  145 (382)
T COG3320          72 PDLGLSERTWQELAENVDLIIHNAALVN----HVFPYSELRGANVLGTAEVLRLAATGKPK--PLHYVSSISVGETEYYS  145 (382)
T ss_pred             ccCCCCHHHHHHHhhhcceEEecchhhc----ccCcHHHhcCcchHhHHHHHHHHhcCCCc--eeEEEeeeeeccccccC
Confidence            4      456667778999999999874    35677888999999999999999999888  89999999998765443


Q ss_pred             CCCcccc--cC---CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc---------------HHHHHHHHHhCCC
Q 044498          161 DTDVKES--EA---WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA---------------PAAFSRKAVTSTD  220 (366)
Q Consensus       161 ~~~~~e~--~~---~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~---------------~~~~~~~~~~~~~  220 (366)
                      .....++  ++   ....+.++|+.||+.+|.++++.... |++++|+|++.               +.+|+..+++-+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~  224 (382)
T COG3320         146 NFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGI  224 (382)
T ss_pred             CCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCC
Confidence            2211222  11   12346789999999999999998777 99999997543               3455555554222


Q ss_pred             CeEEecCCcceeeeeeH-----------HHHHHHHHHHHhcC--CCCcEE-ecCCCcccHHHHHHHHHH
Q 044498          221 NFEMWGDGKQTRSLTFI-----------DECVEGVLRLIKSD--FREPLN-IGSDEMVSINEMAEIILS  275 (366)
Q Consensus       221 ~~~i~~~~~~~~~~i~v-----------~D~a~~~~~~l~~~--~~~~~~-i~~~~~~s~~el~~~i~~  275 (366)
                       ++   +.....+.+.+           .-+++++..+..++  ....|+ ..-|..+.+.++.+.+.+
T Consensus       225 -~P---~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         225 -AP---DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             -CC---CcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence             11   11112222222           22233333333222  123344 233778999999998877

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.87  E-value=9.1e-21  Score=207.22  Aligned_cols=243  Identities=16%  Similarity=0.120  Sum_probs=174.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC----CCCCCCCCccEEEEEeCCCcccccc----------------ccccceEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER----HYSTSIPNALYIIASDWNKNEHMME----------------DMFCHEFHL   81 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g----~~~~~~~~~~~V~~~~r~~~~~~~~----------------~~~~v~~~~   81 (366)
                      ..++|||||||||||++++++|++++    ++         |+++.|........                ...+++++.
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~---------V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~ 1040 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFK---------VFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVL 1040 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcE---------EEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEe
Confidence            45789999999999999999999887    55         88888865321110                012578999


Q ss_pred             ccCCCh------hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           82 VDLRVM------DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        82 ~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      +|++++      +.+..+..++|+|||+|+.+..    ..........|+.++.+++++|.+.+++  +|+|+||.++|+
T Consensus      1041 gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~~~~~--~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1041 GDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHW----VYPYSKLRDANVIGTINVLNLCAEGKAK--QFSFVSSTSALD 1114 (1389)
T ss_pred             ccCCCccCCcCHHHHHHHHhcCCEEEECCcEecC----ccCHHHHHHhHHHHHHHHHHHHHhCCCc--eEEEEeCeeecC
Confidence            999743      4566666789999999997641    2234444568999999999999999998  999999999997


Q ss_pred             CCCCC----------CCCcccccCC---CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH-----------HHH
Q 044498          156 EFKQL----------DTDVKESEAW---PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP-----------AAF  211 (366)
Q Consensus       156 ~~~~~----------~~~~~e~~~~---~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~-----------~~~  211 (366)
                      .....          ...++|+...   ...+.+.|+.+|+.+|.++..+... +++++++|+..+           ..+
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~ 1193 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDF 1193 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhH
Confidence            42110          0012333221   2234678999999999999887664 899999975432           233


Q ss_pred             HHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhcCCCC
Q 044498          212 SRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAEIILSFENEKL  281 (366)
Q Consensus       212 ~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  281 (366)
                      +..+++........++....++|++++|++++++.++..+    ...+||++++..+++.++++.+.+. |.+.
T Consensus      1194 ~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443      1194 LLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred             HHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence            3333331112222344556689999999999999998654    2358999999899999999999764 5543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.8e-21  Score=173.83  Aligned_cols=228  Identities=15%  Similarity=0.047  Sum_probs=160.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc----
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      .++||||||+|+||++++++|+++|++         |+++.|+......   ....++.++.+|+++.+++.++++    
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDR---------VAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA   72 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999         9999987543211   112356889999999988877653    


Q ss_pred             ---CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 ---GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                         ++|+|||+||.........   .+....+++|+.++.++++++    ++.+.+  +||++||.....          
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~----------  140 (276)
T PRK06482         73 ALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGG--RIVQVSSEGGQI----------  140 (276)
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEEcCccccc----------
Confidence               5899999999764321111   123456789999999999997    555677  999999954321          


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEec------------CCc
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWG------------DGK  229 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~------------~~~  229 (366)
                           +..+.+.|+.+|+..|.+++.++.+   ++++++++++..+ ..+...... ...+..+.            .+.
T Consensus       141 -----~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  214 (276)
T PRK06482        141 -----AYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDR-GAPLDAYDDTPVGDLRRALADGS  214 (276)
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccc-cCCCccccchhhHHHHHHHhhcc
Confidence                 1124578999999999999988776   5899999877543 111111110 11111000            000


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFEN  278 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g  278 (366)
                       ..-+.+++|++++++.++..+ .+..|+++++...+..+++..+.+.++
T Consensus       215 -~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        215 -FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             -CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence             011357999999999999765 457799999998899888888777664

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=2.9e-20  Score=179.08  Aligned_cols=225  Identities=11%  Similarity=-0.045  Sum_probs=155.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------------ccccceEEEccCC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------------DMFCHEFHLVDLR   85 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------------~~~~v~~~~~D~~   85 (366)
                      +++++||||||+|+||++++++|+++|++         |++++|+.......               ...++.++.+|+.
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~---------Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt  148 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFR---------VRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE  148 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence            35678999999999999999999999999         99999876532110               0123689999999


Q ss_pred             ChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           86 VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        86 ~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                      +.+.+.+++.++|+|||++|...   ....+....+.+|+.++.+++++++..+++  |||++||.+.+...  .+    
T Consensus       149 D~esI~~aLggiDiVVn~AG~~~---~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg--RIV~VSSiga~~~g--~p----  217 (576)
T PLN03209        149 KPDQIGPALGNASVVICCIGASE---KEVFDVTGPYRIDYLATKNLVDAATVAKVN--HFILVTSLGTNKVG--FP----  217 (576)
T ss_pred             CHHHHHHHhcCCCEEEEcccccc---ccccchhhHHHHHHHHHHHHHHHHHHhCCC--EEEEEccchhcccC--cc----
Confidence            99999999999999999998542   111234456788999999999999999999  99999997653111  11    


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVL  245 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~  245 (366)
                      ..   .......|...|..+|..+..    .|++++++|++.+..-+..... ...+.+..........+..+|+|++++
T Consensus       218 ~~---~~~sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~-t~~v~~~~~d~~~gr~isreDVA~vVv  289 (576)
T PLN03209        218 AA---ILNLFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-THNLTLSEEDTLFGGQVSNLQVAELMA  289 (576)
T ss_pred             cc---chhhHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCcccccc-ccceeeccccccCCCccCHHHHHHHHH
Confidence            00   122345577778888877653    5999999998765211111111 111222111112223588999999999


Q ss_pred             HHHhcC---CCCcEEecCCCc---ccHHHHHHHH
Q 044498          246 RLIKSD---FREPLNIGSDEM---VSINEMAEII  273 (366)
Q Consensus       246 ~~l~~~---~~~~~~i~~~~~---~s~~el~~~i  273 (366)
                      .++.++   .+.+|.+.++..   .++.+++..|
T Consensus       290 fLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        290 CMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI  323 (576)
T ss_pred             HHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence            999854   368888887653   3455555444

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.85  E-value=1.7e-20  Score=166.04  Aligned_cols=216  Identities=17%  Similarity=0.121  Sum_probs=158.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--ccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--MEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|+||||.+|+++++.|++.+++         |+++.|+.....  .....+++++.+|+.+.+.+.++++++|+||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~---------V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFS---------VRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGC---------EEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCC---------cEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEee
Confidence            799999999999999999999999         999999875422  234467899999999999999999999999988


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      .+...             ...+....++++||++.|++  +||+.|....+....            ...|....-..|.
T Consensus        72 ~~~~~-------------~~~~~~~~~li~Aa~~agVk--~~v~ss~~~~~~~~~------------~~~p~~~~~~~k~  124 (233)
T PF05368_consen   72 TPPSH-------------PSELEQQKNLIDAAKAAGVK--HFVPSSFGADYDESS------------GSEPEIPHFDQKA  124 (233)
T ss_dssp             SSCSC-------------CCHHHHHHHHHHHHHHHT-S--EEEESEESSGTTTTT------------TSTTHHHHHHHHH
T ss_pred             cCcch-------------hhhhhhhhhHHHhhhccccc--eEEEEEecccccccc------------cccccchhhhhhh
Confidence            87431             22367788999999999999  999766543332110            1123333445677


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCCcHHHHHHH-HH-----hCC-CCeEEecCCcceeeee-eHHHHHHHHHHHHhcC----
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEKAPAAFSRK-AV-----TST-DNFEMWGDGKQTRSLT-FIDECVEGVLRLIKSD----  251 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~-~~-----~~~-~~~~i~~~~~~~~~~i-~v~D~a~~~~~~l~~~----  251 (366)
                      ..|+.+++.    +++++++|++.+..++.. ..     ... ..+.++++++....++ ..+|+++++..++.++    
T Consensus       125 ~ie~~l~~~----~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~  200 (233)
T PF05368_consen  125 EIEEYLRES----GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN  200 (233)
T ss_dssp             HHHHHHHHC----TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhhhhhc----cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc
Confidence            777666544    999999987765544432 11     111 1356777777666664 9999999999999875    


Q ss_pred             CCCcEEecCCCcccHHHHHHHHHHhcCCCCC
Q 044498          252 FREPLNIGSDEMVSINEMAEIILSFENEKLP  282 (366)
Q Consensus       252 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~  282 (366)
                      .++.+.+++ +.+|..|+++.+.+.+|++.+
T Consensus       201 ~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~  230 (233)
T PF05368_consen  201 NGKTIFLAG-ETLTYNEIAAILSKVLGKKVK  230 (233)
T ss_dssp             EEEEEEEGG-GEEEHHHHHHHHHHHHTSEEE
T ss_pred             CCEEEEeCC-CCCCHHHHHHHHHHHHCCccE
Confidence            245677764 789999999999999998754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.84  E-value=2.5e-20  Score=158.54  Aligned_cols=182  Identities=18%  Similarity=0.197  Sum_probs=140.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEccc
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAA  105 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~  105 (366)
                      |+|+||||++|++++++|+++|++         |+++.|++.+...  ..+++++.+|+.|++.+.++++++|+||++++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~---------V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHE---------VTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSE---------EEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCE---------EEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhh
Confidence            799999999999999999999999         9999999775444  56789999999999999999999999999998


Q ss_pred             ccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHH
Q 044498          106 DMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLAT  185 (366)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~  185 (366)
                      ...      .        ......++++++++.+++  |||++||.++|+.......  ...   . .....|...|..+
T Consensus        70 ~~~------~--------~~~~~~~~~~a~~~~~~~--~~v~~s~~~~~~~~~~~~~--~~~---~-~~~~~~~~~~~~~  127 (183)
T PF13460_consen   70 PPP------K--------DVDAAKNIIEAAKKAGVK--RVVYLSSAGVYRDPPGLFS--DED---K-PIFPEYARDKREA  127 (183)
T ss_dssp             STT------T--------HHHHHHHHHHHHHHTTSS--EEEEEEETTGTTTCTSEEE--GGT---C-GGGHHHHHHHHHH
T ss_pred             hhc------c--------cccccccccccccccccc--cceeeeccccCCCCCcccc--ccc---c-cchhhhHHHHHHH
Confidence            432      1        277888999999999999  9999999999986544211  110   1 1124677888888


Q ss_pred             HHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEe-cCCcceeeeeeHHHHHHHHHHHHhc
Q 044498          186 EGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMW-GDGKQTRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       186 E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~i~v~D~a~~~~~~l~~  250 (366)
                      |+.+.    ..+++++++|+..+..-.    .  ....+. ..+....++|+.+|+|++++.++++
T Consensus       128 e~~~~----~~~~~~~ivrp~~~~~~~----~--~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  128 EEALR----ESGLNWTIVRPGWIYGNP----S--RSYRLIKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHH----HSTSEEEEEEESEEEBTT----S--SSEEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHH----hcCCCEEEEECcEeEeCC----C--cceeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            87764    348999999877542221    1  122222 2344556899999999999998864

...

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.7e-20  Score=163.59  Aligned_cols=218  Identities=12%  Similarity=-0.008  Sum_probs=150.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +.+++|||||+|+||++++++|+++|++         |++++|+......       .....+.++.+|+++++++.+++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~---------V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   75 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAH---------VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALM   75 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCE---------EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4578999999999999999999999999         9998886532111       11224578899999999887665


Q ss_pred             c-------CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC--CCceeEEEEecccccCCCCCCCCCcc
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG--VMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                      +       ++|+|||+|+...   ....++...+++|+.++.++++++.+.-  ..  ++|++||........      .
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~---~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~--~iv~isS~~~~~~~~------~  144 (248)
T PRK07806         76 DTAREEFGGLDALVLNASGGM---ESGMDEDYAMRLNRDAQRNLARAALPLMPAGS--RVVFVTSHQAHFIPT------V  144 (248)
T ss_pred             HHHHHhCCCCcEEEECCCCCC---CCCCCcceeeEeeeHHHHHHHHHHHhhccCCc--eEEEEeCchhhcCcc------c
Confidence            4       5899999998542   2233456678899999999999998752  23  899999954321100      0


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                      +    +......|+.+|+..|.+++.++.+   .++++.+++++.+. .+...+..+..+-.+.........+++++|++
T Consensus       145 ~----~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  220 (248)
T PRK07806        145 K----TMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFA  220 (248)
T ss_pred             c----CCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHH
Confidence            0    1112568999999999999998765   36788888655432 22222222111100000001123689999999


Q ss_pred             HHHHHHHhcC--CCCcEEecCCCc
Q 044498          242 EGVLRLIKSD--FREPLNIGSDEM  263 (366)
Q Consensus       242 ~~~~~~l~~~--~~~~~~i~~~~~  263 (366)
                      +++..+++..  .+++|++++++.
T Consensus       221 ~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        221 AEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             HHHHHHhhccccCccEEEecCccc
Confidence            9999999865  688899998763

>PRK06194 hypothetical protein; Provisional

Probab=99.84  E-value=7.6e-20  Score=166.89  Aligned_cols=218  Identities=11%  Similarity=-0.038  Sum_probs=157.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|.......      .....+.++.+|++|.+++.++++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   75 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMK---------LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD   75 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999986532111      112245779999999998887765


Q ss_pred             -------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHH----HHcCC------CceeEEEEecccccC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAA----RMNGV------MSLTFFFVSSACIYP  155 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~----~~~~~------~~~r~I~~SS~~vyg  155 (366)
                             .+|+|||+||.........   .+....+++|+.++.++++++    .+.+.      .  ++|++||...+.
T Consensus        76 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~~~  153 (287)
T PRK06194         76 AALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEG--HIVNTASMAGLL  153 (287)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCe--EEEEeCChhhcc
Confidence                   4899999999865322222   223445889999998877774    33332      4  899999976653


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC-----CcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcc
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE-----IECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~-----~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      ..               .+...|+.+|++.+.+++.++.+++     +++..+.++.+...+..... ..+..+++++.+
T Consensus       154 ~~---------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~-~~~~~~~~~~~~  217 (287)
T PRK06194        154 AP---------------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSER-NRPADLANTAPP  217 (287)
T ss_pred             CC---------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccc-cCchhcccCccc
Confidence            22               2245799999999999999887754     44555556555444444443 455667777788


Q ss_pred             eeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEK  280 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  280 (366)
                      .++|++++|++..+....              .++..|+++.+.+.+...
T Consensus       218 ~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        218 TRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             cchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHHHcC
Confidence            899999999988764321              179999999998876543

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=164.81  Aligned_cols=231  Identities=13%  Similarity=0.124  Sum_probs=160.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc----c----cccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME----D----MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~----~----~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......    .    ...+.++.+|+++++++.++
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAA---------VMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARA   76 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHH
Confidence            4589999999999999999999999999         99999875432110    0    12457889999999888776


Q ss_pred             hc-------CCCEEEEcccccCCcc-cccc---CcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMG-FIQS---NHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~-~~~~---~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~  158 (366)
                      ++       ++|++||+||...... ....   +....+..|+.+..++++++.+.    +..  +||++||...+..  
T Consensus        77 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~~sS~~~~~~--  152 (276)
T PRK05875         77 VDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGG--SFVGISSIAASNT--  152 (276)
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEechhhcCC--
Confidence            64       6899999999643211 1111   23445788999999988876543    344  8999999765432  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCe-EEecCCcceee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNF-EMWGDGKQTRS  233 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~-~i~~~~~~~~~  233 (366)
                                   ..+.+.|+.+|+..|.+++.++.++   ++++.++++..+. .+...... .... .-.........
T Consensus       153 -------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~  218 (276)
T PRK05875        153 -------------HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACTPLPR  218 (276)
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCCCCCC
Confidence                         1235689999999999999988776   5777778766442 11111110 0000 00001112234


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc----cHHHHHHHHHHhcCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSDEMV----SINEMAEIILSFENE  279 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~----s~~el~~~i~~~~g~  279 (366)
                      +.+++|+++++..++..+    .++++++.+++.+    +..|+++.+.+..|.
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        219 VGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            678999999999999764    3789999988876    888888888766554

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.83  E-value=3.3e-19  Score=160.34  Aligned_cols=215  Identities=12%  Similarity=0.016  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||+++++.|+++|++         |++++|++.....      .....+.++.+|+++.+.+.++++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   76 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAA---------VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGID   76 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe---------EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999987643211      112235778999999988876654


Q ss_pred             -------CCCEEEEcccccCCccc---cccCcchhhhhhHHH----HHHHHHHH-HHcCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTI----SFDMLEAA-RMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~----~~~ll~a~-~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .+|+||||||.......   ........+.+|+.+    +.++++++ +..+.+  +||++||...+.     
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~--~iv~~ss~~~~~-----  149 (262)
T PRK13394         77 KVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGG--VVIYMGSVHSHE-----  149 (262)
T ss_pred             HHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCc--EEEEEcchhhcC-----
Confidence                   48999999997532111   112234457789998    66777777 666677  999999964321     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhC---CCCe-------EEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTS---TDNF-------EMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~---~~~~-------~i~~  226 (366)
                                ...+.+.|+.+|...+.+++.++.+   .+++++++++..+. .+.......   ....       .++.
T Consensus       150 ----------~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T PRK13394        150 ----------ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVML  219 (262)
T ss_pred             ----------CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHh
Confidence                      1123567999999999998888776   37888888765432 222111110   0000       1122


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+...++|++++|++++++.++..+    .++.|++.++.
T Consensus       220 ~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        220 GKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            3445578999999999999998753    36788888764

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.3e-19  Score=161.05  Aligned_cols=225  Identities=15%  Similarity=0.063  Sum_probs=157.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc----ccccceEEEccCCChhHHHhhhc---
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME----DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~----~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++|||||+|+||++++++|+++|++         |++++|+.......    ...++.++.+|+.+.+++.++++   
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDR---------VLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAA   72 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999         99999876532111    12346789999999998876654   


Q ss_pred             ----CCCEEEEcccccCCccccccCcc---hhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNHS---VIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~~---~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|+|||++|..........+.+   ..+..|+.++.++++++.    +.+..  +||++||...+...       
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~-------  143 (257)
T PRK07074         73 AERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRG--AVVNIGSVNGMAAL-------  143 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe--EEEEEcchhhcCCC-------
Confidence                48999999997543222222222   235688898888887773    34556  89999995432110       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEec---CCcceeeeeeHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWG---DGKQTRSLTFID  238 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~i~v~  238 (366)
                               ....|+.+|+..+.+++.++.++   ++++..+++..+..-+..... .....+..   ......++++++
T Consensus       144 ---------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  213 (257)
T PRK07074        144 ---------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARV-AANPQVFEELKKWYPLQDFATPD  213 (257)
T ss_pred             ---------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccc-ccChHHHHHHHhcCCCCCCCCHH
Confidence                     12369999999999999988765   688888876654222211110 00001101   122346789999


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHHHHHH
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAEIILS  275 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~  275 (366)
                      |+++++..++...    .++++++.+|...+..|+.+.+..
T Consensus       214 d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        214 DVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999999999642    467888999999999999988754

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.82  E-value=1.1e-18  Score=150.15  Aligned_cols=220  Identities=14%  Similarity=0.160  Sum_probs=173.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      .+..+-|+|||||+|++++.+|.+.|.+         |++-.|..+.....     ..-.+-+...|+.|+++++++.+.
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~GSQ---------viiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~  130 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMGSQ---------VIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH  130 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcCCe---------EEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHh
Confidence            4456889999999999999999999999         99988876543221     222356889999999999999999


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQD  176 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~  176 (366)
                      ..+|||+.|.     ..+.....+.++|+.+...|.+.|++.|+.  |||++|+..   .+              ....+
T Consensus       131 sNVVINLIGr-----d~eTknf~f~Dvn~~~aerlAricke~GVe--rfIhvS~Lg---an--------------v~s~S  186 (391)
T KOG2865|consen  131 SNVVINLIGR-----DYETKNFSFEDVNVHIAERLARICKEAGVE--RFIHVSCLG---AN--------------VKSPS  186 (391)
T ss_pred             CcEEEEeecc-----ccccCCcccccccchHHHHHHHHHHhhChh--heeehhhcc---cc--------------ccChH
Confidence            9999999994     345556677889999999999999999999  999999853   11              12234


Q ss_pred             chHHHHHHHHHHHHHHHHHcCCcEEEeCCCc--------HHHHHHHHHhCCCCeEEecCCc-ceeeeeeHHHHHHHHHHH
Q 044498          177 AYGLEKLATEGLCKHYTKDFEIECRLVGEKA--------PAAFSRKAVTSTDNFEMWGDGK-QTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       177 ~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~--------~~~~~~~~~~~~~~~~i~~~~~-~~~~~i~v~D~a~~~~~~  247 (366)
                      -|-.+|+++|..+++.    =.+.+|+|+..        +..+... .++-..+++++.|. .....+||-|+|++|..+
T Consensus       187 r~LrsK~~gE~aVrda----fPeAtIirPa~iyG~eDrfln~ya~~-~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnA  261 (391)
T KOG2865|consen  187 RMLRSKAAGEEAVRDA----FPEATIIRPADIYGTEDRFLNYYASF-WRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNA  261 (391)
T ss_pred             HHHHhhhhhHHHHHhh----CCcceeechhhhcccchhHHHHHHHH-HHhcCceeeecCCcceeeccEEEehHHHHHHHh
Confidence            5779999999988775    23578887543        2333333 33366788887773 456789999999999999


Q ss_pred             HhcC--CCCcEEecCCCcccHHHHHHHHHHhcCC
Q 044498          248 IKSD--FREPLNIGSDEMVSINEMAEIILSFENE  279 (366)
Q Consensus       248 l~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~  279 (366)
                      ++.+  .+.+|.+++++.+.+.|+++.+.+...+
T Consensus       262 vkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~  295 (391)
T KOG2865|consen  262 VKDPDSMGKTYEFVGPDRYQLSELVDIMYDMARE  295 (391)
T ss_pred             ccCccccCceeeecCCchhhHHHHHHHHHHHHhh
Confidence            9887  5889999999999999999998776655

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=4.6e-19  Score=157.91  Aligned_cols=215  Identities=13%  Similarity=0.064  Sum_probs=149.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||||+||++++++|+++|++         |+++.+.......       ....++.++.+|+.+.+.+.+++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   75 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGAD---------VVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAV   75 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe---------EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHH
Confidence            4578999999999999999999999999         9887766543211       11234688999999999887765


Q ss_pred             c-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|+|||+||.......   ...+....+..|+.+..++++++    ++.+.+  +||++||...+...   
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~i~~SS~~~~~~~---  150 (249)
T PRK12825         76 AAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGG--RIVNISSVAGLPGW---  150 (249)
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--EEEEECccccCCCC---
Confidence            3       58999999996542211   12223455888999999888887    456677  99999997665321   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                  .+...|+.+|...+.+++.++.+   .+++++++|+..+. .+...... ...... ........+++
T Consensus       151 ------------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~  216 (249)
T PRK12825        151 ------------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE-EAREAK-DAETPLGRSGT  216 (249)
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc-hhHHhh-hccCCCCCCcC
Confidence                        23457999999999999888776   48999999765431 11111000 000000 00112233889


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .+|+++++..++...    .+++|+++++..+
T Consensus       217 ~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        217 PEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            999999999999664    4789999987543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.82  E-value=7.7e-19  Score=157.57  Aligned_cols=215  Identities=13%  Similarity=-0.016  Sum_probs=146.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......      ...++.++.+|+++.+++.++++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   73 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAK---------VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGID   73 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         99999876532211      12346789999999998877654


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHH----HHHHHHHHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTI----SFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~----~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|+|||+|+..........   +....+..|+.+    +..++.++++.+.+  +||++||...+..     
T Consensus        74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~iss~~~~~~-----  146 (258)
T PRK12429         74 YAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGG--RIINMASVHGLVG-----  146 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCe--EEEEEcchhhccC-----
Confidence                   68999999996542111111   123346688888    45555555666777  9999999754422     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhC-----CCCe-----EEecC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTS-----TDNF-----EMWGD  227 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~-----~~~~-----~i~~~  227 (366)
                                ..+.+.|+.+|...+.+.+.++.+.   ++++.++++..+. .+....+..     +.+.     ..+..
T Consensus       147 ----------~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T PRK12429        147 ----------SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP  216 (258)
T ss_pred             ----------CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc
Confidence                      1235679999999998888876654   6788888765442 222111110     0000     01122


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ....+.+++++|+|+++..++...    .++.|++.+|.
T Consensus       217 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        217 LVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             cCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence            233467999999999999998653    36788888763

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.81  E-value=1.4e-18  Score=155.69  Aligned_cols=215  Identities=17%  Similarity=0.112  Sum_probs=147.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhh--
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMT--   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~--   94 (366)
                      +++||||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+.+.+++..++  
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGAN---------VVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAA   71 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            368999999999999999999999999         99999976432111      1234678999999998665443  


Q ss_pred             -----cCCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCC
Q 044498           95 -----SGVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        95 -----~~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           .++|+|||+|+..........+   ....+..|+.++..+++++    ++.+.+  +||++||...+...     
T Consensus        72 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~--~~v~~ss~~~~~~~-----  144 (255)
T TIGR01963        72 AAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWG--RIINIASAHGLVAS-----  144 (255)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe--EEEEEcchhhcCCC-----
Confidence                 4689999999975432111122   2344668999877777766    556777  99999997554321     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC---CCCeE-------EecCC
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS---TDNFE-------MWGDG  228 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~---~~~~~-------i~~~~  228 (366)
                                .....|+.+|...+.+++.++.+.   +++++++++..+ ..+.......   .....       ....+
T Consensus       145 ----------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T TIGR01963       145 ----------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPG  214 (255)
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHcc
Confidence                      123579999999999988876653   788888887654 2222111110   11110       01124


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .+.+++++++|+|++++.++...    .++.|++.++..
T Consensus       215 ~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       215 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             CccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            45678999999999999999653    467899987653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09135 pteridine reductase; Provisional

Probab=99.81  E-value=2.1e-18  Score=153.84  Aligned_cols=209  Identities=15%  Similarity=0.103  Sum_probs=143.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.++||||||+|+||++++++|+++|++         |++++|........        ....+.++.+|+++.+.+.++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   75 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYR---------VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPEL   75 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHH
Confidence            4578999999999999999999999999         99999864322110        112367899999999988776


Q ss_pred             hc-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      ++       ++|+|||+||.......   ...+....+++|+.++.++++++.+.   ...  .++++++.  ++.    
T Consensus        76 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--~~~~~~~~--~~~----  147 (249)
T PRK09135         76 VAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRG--AIVNITDI--HAE----  147 (249)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCe--EEEEEeCh--hhc----
Confidence            64       58999999996432111   11234567889999999999999653   122  46665542  111    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~  229 (366)
                               .+..|.+.|+.+|+..|.+++.++.++  ++++++++++.+         ............++       
T Consensus       148 ---------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~-------  211 (249)
T PRK09135        148 ---------RPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPL-------  211 (249)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCc-------
Confidence                     145567889999999999999998876  477777765322         11111111111111       


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC---CCCcEEecCCCccc
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD---FREPLNIGSDEMVS  265 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~~~~s  265 (366)
                        ..+..++|+++++..++...   .+++|++.+|+.++
T Consensus       212 --~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        212 --KRIGTPEDIAEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             --CCCcCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence              11235899999997666432   57899999987654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.1e-19  Score=160.11  Aligned_cols=215  Identities=13%  Similarity=0.034  Sum_probs=143.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .+++||||||+|+||++++++|+++|++         |++++|+.......   ...++..+.+|+++.+++.++++   
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~   73 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHR---------VVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAE   73 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCE---------EEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999876532211   11246788999999988877654   


Q ss_pred             ----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|+|||+||..........+   ....+++|+.++.++++++.    ..+.+  ++|++||...+..        
T Consensus        74 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~--~iv~iSS~~~~~~--------  143 (277)
T PRK06180         74 ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRG--HIVNITSMGGLIT--------  143 (277)
T ss_pred             HHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCC--EEEEEecccccCC--------
Confidence                589999999975422122222   23448899999999999854    34556  8999999654321        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-HHHHHHhC-CC----------CeEEecCCc
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-FSRKAVTS-TD----------NFEMWGDGK  229 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~~~~~~~~-~~----------~~~i~~~~~  229 (366)
                             ..+...|+.+|+..|.+++.++.+   ++++++++++..+.. +....... ..          .........
T Consensus       144 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (277)
T PRK06180        144 -------MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAK  216 (277)
T ss_pred             -------CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhh
Confidence                   123567999999999999888766   489999887654311 10000000 00          000000000


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcCCCCcEEecCCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSDFREPLNIGSDE  262 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~  262 (366)
                      ....+..++|+++++..++..+.....++.++.
T Consensus       217 ~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~  249 (277)
T PRK06180        217 SGKQPGDPAKAAQAILAAVESDEPPLHLLLGSD  249 (277)
T ss_pred             ccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHH
Confidence            112356799999999999987654444444444

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.1e-18  Score=158.27  Aligned_cols=230  Identities=12%  Similarity=0.027  Sum_probs=157.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......   .....+.++.+|+++.+.+.++++   
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDR---------VVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAV   72 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999         9999987643211   112245788999999988776543   


Q ss_pred             ----CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|+|||+||.......   ...+....+++|+.++..+++++    ++.+.+  ++|++||...+...       
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~vsS~~~~~~~-------  143 (275)
T PRK08263         73 EHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG--HIIQISSIGGISAF-------  143 (275)
T ss_pred             HHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--EEEEEcChhhcCCC-------
Confidence                58999999997643211   12234556889999987777765    556667  89999997655422       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-HHHHHHhCCCCeEE-------ecCCcceee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-FSRKAVTSTDNFEM-------WGDGKQTRS  233 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~~~~~~~~~~~~~i-------~~~~~~~~~  233 (366)
                              ...+.|+.+|+..+.+.+.++.+   +++++++++++.+.. +.............       .........
T Consensus       144 --------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (275)
T PRK08263        144 --------PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERS  215 (275)
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhcc
Confidence                    12456999999999988888775   589999997654321 11100000000000       011112234


Q ss_pred             e-eeHHHHHHHHHHHHhcCC--CCcEEecCCCcccHHHHHHHHHHhc
Q 044498          234 L-TFIDECVEGVLRLIKSDF--REPLNIGSDEMVSINEMAEIILSFE  277 (366)
Q Consensus       234 ~-i~v~D~a~~~~~~l~~~~--~~~~~i~~~~~~s~~el~~~i~~~~  277 (366)
                      + +.++|++++++.+++.+.  .+.++..+++.+++.++.+.+.+..
T Consensus       216 ~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (275)
T PRK08263        216 VDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE  262 (275)
T ss_pred             CCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence            5 789999999999998753  3444444556899999999988753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=2.6e-18  Score=153.60  Aligned_cols=216  Identities=16%  Similarity=0.057  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++..+........       ....+.++.+|+++.+++.+++
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   75 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSL---------VVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLA   75 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHH
Confidence            4579999999999999999999999999         88776543221110       1123467889999998777665


Q ss_pred             c-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                      +       ++|+|||+||..........+.   ...+.+|+.+..++++++.+.  ...  +||++||...|.       
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~-------  146 (252)
T PRK06077         76 KATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGG--AIVNIASVAGIR-------  146 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCc--EEEEEcchhccC-------
Confidence            3       6899999999743221211222   345788999998888888764  224  799999976653       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcHHHHHH-HHHhC-CCCe-EEecCCcceeeeeeH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAPAAFSR-KAVTS-TDNF-EMWGDGKQTRSLTFI  237 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~~~~~~-~~~~~-~~~~-~i~~~~~~~~~~i~v  237 (366)
                              +..+.+.|+.+|...+.+++.++.++  ++.+.++++..+..-+. ....- +... ...........++++
T Consensus       147 --------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (252)
T PRK06077        147 --------PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDP  218 (252)
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCH
Confidence                    22346789999999999999998876  56777776654421111 11100 0000 000011122368999


Q ss_pred             HHHHHHHHHHHhcC--CCCcEEecCCCc
Q 044498          238 DECVEGVLRLIKSD--FREPLNIGSDEM  263 (366)
Q Consensus       238 ~D~a~~~~~~l~~~--~~~~~~i~~~~~  263 (366)
                      +|+|++++.++..+  .+++|++.+|..
T Consensus       219 ~dva~~~~~~~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        219 EEVAEFVAAILKIESITGQVFVLDSGES  246 (252)
T ss_pred             HHHHHHHHHHhCccccCCCeEEecCCee
Confidence            99999999999754  478999988753

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.4e-18  Score=155.59  Aligned_cols=213  Identities=16%  Similarity=0.085  Sum_probs=143.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCcccc------ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++|+||||+|+||++++++|+++|++         |+++ .|+.....      ......+.++.+|++|.+++.+++
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~---------v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~   75 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGAL---------VAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLV   75 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHH
Confidence            3478999999999999999999999998         8775 45543211      111224678999999999887765


Q ss_pred             c-------------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCC
Q 044498           95 S-------------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        95 ~-------------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~  156 (366)
                      +             ++|+|||+||..........+.   ...++.|+.++.++++++.+.  ...  +||++||...+..
T Consensus        76 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~v~~sS~~~~~~  153 (254)
T PRK12746         76 EQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEG--RVINISSAEVRLG  153 (254)
T ss_pred             HHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCC--EEEEECCHHhcCC
Confidence            4             4899999999754211111121   344679999999999988763  334  7999999766542


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcce
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQT  231 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~  231 (366)
                                     ..+...|+.+|.+.+.+.+.++.+   .+++++++++..+ ..+...... +..+ .+.......
T Consensus       154 ---------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~  217 (254)
T PRK12746        154 ---------------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD-DPEIRNFATNSSVF  217 (254)
T ss_pred             ---------------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc-ChhHHHHHHhcCCc
Confidence                           123557999999999998888775   4688888876543 112111111 0000 000111122


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+++++|+++++..++...    .+++|++.++
T Consensus       218 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        218 GRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            35678999999999888653    4678999876

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.80  E-value=1.7e-18  Score=154.53  Aligned_cols=215  Identities=15%  Similarity=0.037  Sum_probs=148.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||.+++++|+++|++         |++++|+..+..      ......+.++.+|+.+.+.+.++++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAE---------VIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVA   75 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         999998753211      1112236889999999988887764


Q ss_pred             -------CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|+|||+++......   ....+....+..|+.++.++++++.    +.+.+  +||++||...++.     
T Consensus        76 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~ii~~ss~~~~~~-----  148 (251)
T PRK12826         76 AGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGG--RIVLTSSVAGPRV-----  148 (251)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc--EEEEEechHhhcc-----
Confidence                   6899999998764311   1122335568899999999988774    45566  8999999755411     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                               +..+...|+.+|...+.+++.++.+.   ++++.++++..+ ......... ...............++++
T Consensus       149 ---------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  218 (251)
T PRK12826        149 ---------GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEP  218 (251)
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCH
Confidence                     12235579999999999998887663   788888876543 211111110 0000000011112257899


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|+++++..++...    .+++|++.+|.
T Consensus       219 ~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        219 EDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            99999999988653    47899998765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.80  E-value=1e-18  Score=156.89  Aligned_cols=217  Identities=14%  Similarity=0.078  Sum_probs=152.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||+++++.|+++|++         |++++|+......   .....+.++.+|+++.+++.++++   
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGAR---------VVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAV   75 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCE---------EEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         9999987653221   112236789999999988777654   


Q ss_pred             ----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcC-----CCceeEEEEeccc-ccCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNG-----VMSLTFFFVSSAC-IYPEFKQLDT  162 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~-----~~~~r~I~~SS~~-vyg~~~~~~~  162 (366)
                          .+|++||+|+........   ..+....+..|+.++.++++++...-     ..  +||++||.. .++       
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~iv~~sS~~~~~~-------  146 (257)
T PRK07067         76 ERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGG--KIINMASQAGRRG-------  146 (257)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCc--EEEEeCCHHhCCC-------
Confidence                589999999975422122   22345568899999999999986531     23  799999953 222       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-HHHHH---HhCC------CCeEEecCCc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-FSRKA---VTST------DNFEMWGDGK  229 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~~~~~---~~~~------~~~~i~~~~~  229 (366)
                               ..+...|+.+|...+.+.+.++.+   +++++..+++..+.. +....   ....      .....++...
T Consensus       147 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T PRK07067        147 ---------EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAV  217 (257)
T ss_pred             ---------CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcC
Confidence                     124668999999999999888775   478888887664421 11111   0000      0011123334


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      +.+.+.+++|+|+++..++...    .+++|++.+|+.+|
T Consensus       218 ~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        218 PLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             CCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence            5567899999999999999764    47899998886543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.9e-18  Score=156.64  Aligned_cols=208  Identities=11%  Similarity=0.054  Sum_probs=144.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .+++++||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFP---------VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVA   79 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         99888765321110      11245788999999998877654


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|+|||+||..........   +....+..|+.++.++++++.+    .+..  +||++||...|...    
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g--~iv~isS~~~~~~~----  153 (274)
T PRK07775         80 QAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRG--DLIFVGSDVALRQR----  153 (274)
T ss_pred             HHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--eEEEECChHhcCCC----
Confidence                   58999999997542212111   2234478999999999888653    3445  79999997665422    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH--------HHHHHhCCCCeEEecCCc
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF--------SRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~--------~~~~~~~~~~~~i~~~~~  229 (366)
                                 .+...|+.+|++.|.+++.++.++   ++++.+++++.+ ..+        ......   ....++ ..
T Consensus       154 -----------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~---~~~~~~-~~  218 (274)
T PRK07775        154 -----------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLE---DWAKWG-QA  218 (274)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHH---HHHHhc-cc
Confidence                       124579999999999999988765   889998877543 110        000110   000011 11


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC-CCCcEEec
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD-FREPLNIG  259 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~  259 (366)
                      ..+.+++++|+|++++.++.++ .+.+||+.
T Consensus       219 ~~~~~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        219 RHDYFLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             ccccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            2356899999999999999876 34567765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=1.6e-18  Score=155.49  Aligned_cols=217  Identities=14%  Similarity=0.064  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~   79 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAE---------VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAID   79 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHH
Confidence            5689999999999999999999999999         9999987543211      111235788999999988877664


Q ss_pred             -------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|+|||+||..........+   .+..+.+|+.++.++++++.+.    +.+  ++|++||...+.      
T Consensus        80 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~iss~~~~~------  151 (255)
T PRK07523         80 AFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAG--KIINIASVQSAL------  151 (255)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe--EEEEEccchhcc------
Confidence                   489999999975422121112   2445779999999999988753    456  899999964321      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCe-EEecCCcceeeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNF-EMWGDGKQTRSLTF  236 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~-~i~~~~~~~~~~i~  236 (366)
                               +..+...|+.+|...+.+++.++.+   +++++..+++..+. .+...... .... ...........+..
T Consensus       152 ---------~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~  221 (255)
T PRK07523        152 ---------ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRTPAGRWGK  221 (255)
T ss_pred             ---------CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcCCCCCCcC
Confidence                     1234567999999999999988764   47888888765432 11111110 0000 00011112334778


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      ++|+|.++..++...    .++++++.+|...|
T Consensus       222 ~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        222 VEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence            999999999999653    46889998876544

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=2e-18  Score=154.84  Aligned_cols=215  Identities=13%  Similarity=0.045  Sum_probs=146.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++|+||||+|+||++++++|+++|++         |++++|.......       ....++.++.+|+++++++.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~---------vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFD---------LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLD   72 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            467999999999999999999999999         9999876532111       112346899999999988776543


Q ss_pred             -------CCCEEEEcccccCCcc-----ccccCcchhhhhhHHHHHHHHHHHHHc-----C-----CCceeEEEEecccc
Q 044498           96 -------GVDNMSNLAADMGGMG-----FIQSNHSVIMYKNTTISFDMLEAARMN-----G-----VMSLTFFFVSSACI  153 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-----~~~~r~I~~SS~~v  153 (366)
                             .+|+|||+||......     ....+....+..|+.++.++++++...     +     ..  +||++||...
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~  150 (256)
T PRK12745         73 AAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHR--SIVFVSSVNA  150 (256)
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCc--EEEEECChhh
Confidence                   6899999999653211     112234455889999999998887543     1     45  7999999654


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHH-HHhCCCCeEEecCCc
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRK-AVTSTDNFEMWGDGK  229 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~-~~~~~~~~~i~~~~~  229 (366)
                      +..               ..+.+.|+.+|.+.+.+++.++.+   +++++.+++++.+..-+.. ........ +.....
T Consensus       151 ~~~---------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~  214 (256)
T PRK12745        151 IMV---------------SPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDAL-IAKGLV  214 (256)
T ss_pred             ccC---------------CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhh-hhhcCC
Confidence            321               123457999999999999998865   5789988876544211110 00000000 000011


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ....+.+++|+++++..++...    .++.|++.++...
T Consensus       215 ~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        215 PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            2235779999999999988653    4788999877543

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8e-19  Score=156.80  Aligned_cols=205  Identities=20%  Similarity=0.188  Sum_probs=145.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|.......      .....+.++.+|+++.+++.++++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~---------vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGAS---------VVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMAD   75 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999987543211      111235688999999988776553


Q ss_pred             -------CCCEEEEcccccCCc------cccccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCC
Q 044498           96 -------GVDNMSNLAADMGGM------GFIQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~  158 (366)
                             .+|+|||+||.....      .....+....+..|+.++.++++++...    +.+  +||++||...|.   
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~---  150 (250)
T PRK07774         76 ATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG--AIVNQSSTAAWL---  150 (250)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc--EEEEEecccccC---
Confidence                   589999999975311      0111223445789999999999888754    345  899999976553   


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH----------HHHHHHHHhCCCCeEEe
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP----------AAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~----------~~~~~~~~~~~~~~~i~  225 (366)
                                     +.+.|+.+|++.+.+++.++.++   ++.+.+++++.+          ..+...+.+ +.+.   
T Consensus       151 ---------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~-~~~~---  211 (250)
T PRK07774        151 ---------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVK-GIPL---  211 (250)
T ss_pred             ---------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHh-cCCC---
Confidence                           23579999999999999998875   677777755432          112222222 1111   


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                            .-+..++|++++++.++...    .+++|++.+|+.++
T Consensus       212 ------~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        212 ------SRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             ------CCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence                  12456899999999988653    57899999886543

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.3e-18  Score=155.55  Aligned_cols=219  Identities=13%  Similarity=0.015  Sum_probs=146.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHh-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLR-   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~-   92 (366)
                      +++++|||||+|+||+++++.|+++|++         |++++|+.......        ....+.++.+|++|++++.. 
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   72 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYL---------VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNF   72 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHH
Confidence            3567999999999999999999999999         99998875432111        11346889999999988765 


Q ss_pred             --h---hcCCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCC
Q 044498           93 --M---TSGVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        93 --~---~~~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                        +   +..+|+|||+||.........   .+....+..|+.++.++++++    ++.+..  +||++||...+..    
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~vsS~~~~~~----  146 (280)
T PRK06914         73 QLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG--KIINISSISGRVG----  146 (280)
T ss_pred             HHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--EEEEECcccccCC----
Confidence              1   135799999999754211111   223445778999988888775    556667  8999998533211    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHH---HcCCcEEEeCCCcHHHHH-HHHHhCCCCeEEecC---------
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK---DFEIECRLVGEKAPAAFS-RKAVTSTDNFEMWGD---------  227 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~---~~~~~~~i~r~~~~~~~~-~~~~~~~~~~~i~~~---------  227 (366)
                                 ..+.+.|+.+|...+.+++.++.   .+++++++++++.+..-+ ..... ........+         
T Consensus       147 -----------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~  214 (280)
T PRK06914        147 -----------FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQ-LAENQSETTSPYKEYMKK  214 (280)
T ss_pred             -----------CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhcccc-ccccccccccchHHHHHH
Confidence                       12356799999999998888763   458999999876442221 11100 000000000         


Q ss_pred             -----CcceeeeeeHHHHHHHHHHHHhcCC-CCcEEecCCCcccHH
Q 044498          228 -----GKQTRSLTFIDECVEGVLRLIKSDF-REPLNIGSDEMVSIN  267 (366)
Q Consensus       228 -----~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~i~~~~~~s~~  267 (366)
                           ......+++++|+|+++..++.++. ...|+++++..+++.
T Consensus       215 ~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        215 IQKHINSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             HHHHHhhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence                 0112346889999999999998863 456888776655544

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.8e-18  Score=154.45  Aligned_cols=216  Identities=16%  Similarity=0.062  Sum_probs=145.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-c----cccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-D----MFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~----~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      .+++||||||+|+||++++++|+++|++         |++++|+....... .    ...+.++.+|+.+++++.++++ 
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   74 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGAR---------VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAA   74 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            5579999999999999999999999999         99999986532211 0    1235799999999998887654 


Q ss_pred             ------CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|+|||+++......    ....+....+..|+.++.++++.+..    .+.+  +||++||...+..     
T Consensus        75 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~-----  147 (251)
T PRK07231         75 ALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGG--AIVNVASTAGLRP-----  147 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc--EEEEEcChhhcCC-----
Confidence                  5799999999643211    11223345688899887777766654    5666  8999999766542     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCC--CCeEEecCCcceeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTST--DNFEMWGDGKQTRSLT  235 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~--~~~~i~~~~~~~~~~i  235 (366)
                                ..+...|+.+|...+.+.+.++.++   ++++..++++.+. .+........  ..............++
T Consensus       148 ----------~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (251)
T PRK07231        148 ----------RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLG  217 (251)
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCc
Confidence                      2235679999999999998887764   6778777655331 1111111100  0000000111223578


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +++|+|++++.++...    .++.+.+.++..
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        218 TPEDIANAALFLASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             CHHHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence            9999999999999653    356677776643

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.1e-17  Score=151.89  Aligned_cols=161  Identities=18%  Similarity=0.081  Sum_probs=120.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++|+||||+|+||++++++|.++|++         |++++|+..........++.++.+|++|.+++.++++      
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~---------Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   73 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWR---------VFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELS   73 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999         9999987654332223357899999999987766543      


Q ss_pred             --CCCEEEEcccccCCccccccC---cchhhhhhHHH----HHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 --GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTI----SFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~----~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                        .+|++||+||..........+   ....+++|+.+    +..+++.+++.+..  +||++||...+.           
T Consensus        74 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g--~iv~isS~~~~~-----------  140 (277)
T PRK05993         74 GGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQG--RIVQCSSILGLV-----------  140 (277)
T ss_pred             CCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCC--EEEEECChhhcC-----------
Confidence              479999999975432221222   23458899988    66677777777777  999999964321           


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP  208 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~  208 (366)
                          +..+...|+.+|+..+.+.+.++.+   .|+++++++++.+
T Consensus       141 ----~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v  181 (277)
T PRK05993        141 ----PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPI  181 (277)
T ss_pred             ----CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCc
Confidence                2234568999999999998887644   5899999987655

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.78  E-value=2.9e-18  Score=152.51  Aligned_cols=210  Identities=15%  Similarity=0.042  Sum_probs=145.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|++.....      .....+.++.+|+.+++.+.++++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAK---------VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIE   74 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999988653211      112245788899999988777654


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|+|||++|..........   +....+..|+.+..++++++.    +.+.+  +||++||.....      
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~--~ii~~ss~~~~~------  146 (246)
T PRK05653         75 AAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYG--RIVNISSVSGVT------  146 (246)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEECcHHhcc------
Confidence                   46999999997543111111   224457889999988888874    45667  999999964321      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH----HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP----AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                               +..+...|+.+|...+.+.+.++++.   +++++++++..+    ...+.........     .......+
T Consensus       147 ---------~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  212 (246)
T PRK05653        147 ---------GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEIL-----KEIPLGRL  212 (246)
T ss_pred             ---------CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHH-----hcCCCCCC
Confidence                     11235679999999999888887653   788888875433    1100111110000     01112457


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++++|+++++..++...    .+++|++.+|.
T Consensus       213 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        213 GQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            88999999999998652    46889988775

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.5e-17  Score=146.27  Aligned_cols=203  Identities=14%  Similarity=0.058  Sum_probs=138.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhc---CC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTS---GV   97 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~---~~   97 (366)
                      ||++|||||+|+||+++++.|+++ ++         |++++|+.......  ...+++++.+|+++.+.+.++++   ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i   72 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HT---------LLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRL   72 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CC---------EEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCC
Confidence            578999999999999999999999 99         99999876432111  11246899999999999988776   59


Q ss_pred             CEEEEcccccCCccccccC---cchhhhhhHHH----HHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           98 DNMSNLAADMGGMGFIQSN---HSVIMYKNTTI----SFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~----~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      |+|||++|..........+   ....+..|+.+    +.++++++++.+ +  ++|++||...++..             
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~--~~v~~ss~~~~~~~-------------  136 (227)
T PRK08219         73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-G--HVVFINSGAGLRAN-------------  136 (227)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C--eEEEEcchHhcCcC-------------
Confidence            9999999975421111112   23346777787    455555555554 4  79999997655322             


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHc-C-CcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDF-E-IECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~-~-~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~  247 (366)
                        .+...|+.+|...+.+++.++... + +++..++++.+. ........ ..     +.......+++++|+++++..+
T Consensus       137 --~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~dva~~~~~~  208 (227)
T PRK08219        137 --PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA-QE-----GGEYDPERYLRPETVAKAVRFA  208 (227)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh-hh-----ccccCCCCCCCHHHHHHHHHHH
Confidence              234579999999999888876653 3 677777655431 22222221 11     0111224579999999999999


Q ss_pred             HhcC-CCCcEEec
Q 044498          248 IKSD-FREPLNIG  259 (366)
Q Consensus       248 l~~~-~~~~~~i~  259 (366)
                      ++++ .+.++++.
T Consensus       209 l~~~~~~~~~~~~  221 (227)
T PRK08219        209 VDAPPDAHITEVV  221 (227)
T ss_pred             HcCCCCCccceEE
Confidence            9876 45666664

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=7.3e-18  Score=150.59  Aligned_cols=216  Identities=15%  Similarity=0.005  Sum_probs=143.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++++||||+|+||++++++|+++|++         |+++ .|+......      .....+.++.+|+++++++.+++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~---------v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYD---------IAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMF   73 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            4578999999999999999999999998         8764 555432111      11234678999999999887766


Q ss_pred             c-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       .+|+|||+||..........+.   ...+.+|+.++.++++++.+    .+.+  +||++||...+.     
T Consensus        74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~~~-----  146 (250)
T PRK08063         74 AQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGG--KIISLSSLGSIR-----  146 (250)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe--EEEEEcchhhcc-----
Confidence            4       5899999999653221221222   23467899998888887765    4556  899999964432     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeE-EecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFE-MWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~i~  236 (366)
                                +..+...|+.+|.+.+.+++.++.+   .++++..+++..+..-+.........+. ..........+++
T Consensus       147 ----------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (250)
T PRK08063        147 ----------YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVE  216 (250)
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcC
Confidence                      1223567999999999999988766   4788888876644211111000000000 0000011123688


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .+|+++++..++..+    .++.+++.+|..
T Consensus       217 ~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        217 PEDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            999999999998653    367888887754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.78  E-value=6e-18  Score=150.87  Aligned_cols=213  Identities=15%  Similarity=0.076  Sum_probs=145.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||+|+||++++++|+++|++         |++..+.......       .....+.++.+|+++++.+.+++
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~---------v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   75 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAK---------VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLV   75 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE---------EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            4578999999999999999999999999         8876543322111       11224688999999999888766


Q ss_pred             c-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       .+|+|||+|+.........   ......+..|+.++.++++++..    .+..  +||++||...+..    
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~----  149 (247)
T PRK12935         76 EEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEG--RIISISSIIGQAG----  149 (247)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEEcchhhcCC----
Confidence            4       3899999999754321111   33455688999999998888864    3445  8999999543211    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   ++++++++++.+.. +...... ...... ......+.+.+
T Consensus       150 -----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~-~~~~~~~~~~~  216 (247)
T PRK12935        150 -----------GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE-EVRQKI-VAKIPKKRFGQ  216 (247)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH-HHHHHH-HHhCCCCCCcC
Confidence                       1235679999999999888877764   78888886654321 1111100 000000 01122356899


Q ss_pred             HHHHHHHHHHHHhcC---CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD---FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~---~~~~~~i~~~~  262 (366)
                      ++|++++++.+++..   .++.|++.++.
T Consensus       217 ~edva~~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        217 ADEIAKGVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence            999999999998653   47899998764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.78  E-value=9.7e-18  Score=149.74  Aligned_cols=215  Identities=16%  Similarity=0.090  Sum_probs=147.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   72 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAK---------VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVA   72 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            4678999999999999999999999999         9999887643211      112346889999999988877654


Q ss_pred             -------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|++||+++..........+.   ...+..|+.++.++++++.    +.+.+  ++|++||...+....   
T Consensus        73 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~ii~iss~~~~~~~~---  147 (250)
T TIGR03206        73 AAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAG--RIVNIASDAARVGSS---  147 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe--EEEEECchhhccCCC---
Confidence                   5899999999653222222222   3458899999998887775    45566  899999986664322   


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCC-CC--e-EEecCCcceee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTST-DN--F-EMWGDGKQTRS  233 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~-~~--~-~i~~~~~~~~~  233 (366)
                                  ....|+.+|++.+.+++.++.+.   ++++.+++++.+ ..++....... .+  + ...........
T Consensus       148 ------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (250)
T TIGR03206       148 ------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGR  215 (250)
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccC
Confidence                        23469999999999999888775   788888876644 22222211100 00  0 00000011123


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +...+|+|+++..++..+    .++++++.+|.
T Consensus       216 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       216 LGQPDDLPGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             CcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence            567899999999988654    47888887663

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.2e-17  Score=146.19  Aligned_cols=207  Identities=11%  Similarity=0.004  Sum_probs=146.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+..+..    .....+++++.+|+.+.+++.++++  
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGAR---------VALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEV   76 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCe---------EEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHH
Confidence            4578999999999999999999999999         999999764321    1122346788999999988777654  


Q ss_pred             -----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|+|||+++..........+   ....+..|..++.++++++.    +.+.+  +||++||...++..      
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~------  148 (239)
T PRK12828         77 NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGG--RIVNIGAGAALKAG------  148 (239)
T ss_pred             HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCC--EEEEECchHhccCC------
Confidence                 689999999964321111122   23447789999988888774    45677  99999998766432      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                               .+...|+.+|...+.+++.++..   .++++.++++..+..-..   .  ..  ..  ......+++++|+
T Consensus       149 ---------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~---~--~~--~~--~~~~~~~~~~~dv  210 (239)
T PRK12828        149 ---------PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPN---R--AD--MP--DADFSRWVTPEQI  210 (239)
T ss_pred             ---------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcch---h--hc--CC--chhhhcCCCHHHH
Confidence                     23456999999999888877654   478888887765422111   1  00  10  0112347899999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCCc
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ++++..++...    .++.+.+.+++.
T Consensus       211 a~~~~~~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        211 AAVIAFLLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HHHHHHHhCcccccccceEEEecCCEe
Confidence            99999999753    367788877653

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9e-18  Score=150.13  Aligned_cols=214  Identities=14%  Similarity=0.078  Sum_probs=144.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|+.......     ....+.++.+|++|++++.++++ 
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   74 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGAR---------VVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDF   74 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCe---------EEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            5678999999999999999999999999         99999875432111     12236889999999998877653 


Q ss_pred             ------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            ++|+|||+++..........+   ....+..|+.++.++.+++    ++.+.+  +||++||...+..      
T Consensus        75 i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~ii~~sS~~~~~~------  146 (252)
T PRK06138         75 VAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGG--SIVNTASQLALAG------  146 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCe--EEEEECChhhccC------
Confidence                  689999999975432222222   2334788999886666554    456667  8999999644321      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCC-C--eE-EecCCcceeee
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTD-N--FE-MWGDGKQTRSL  234 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~-~--~~-i~~~~~~~~~~  234 (366)
                               ..+...|+.+|.+.+.+++.++.++   +++++.+++..+ ..+..+...... +  .. ..........+
T Consensus       147 ---------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
T PRK06138        147 ---------GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRF  217 (252)
T ss_pred             ---------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCC
Confidence                     1224579999999999999988765   788888876544 222222211000 0  00 00011112247


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ++++|+++++..++..+    .+..+.+.++
T Consensus       218 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        218 GTAEEVAQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            88999999999998764    3566776654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.77  E-value=3e-17  Score=148.73  Aligned_cols=213  Identities=13%  Similarity=0.005  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++|+||||+|+||++++++|+++|++         |++++|+..........++.++.+|+++.+++.++++      
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~---------V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYT---------VYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999         9999987654322222357899999999998877764      


Q ss_pred             -CCCEEEEcccccCCccc---cccCcchhhhhhHHHH----HHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTIS----FDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~----~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||.......   ...+....+++|+.+.    ..++..+++.+..  ++|++||...+..           
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g--~iv~isS~~~~~~-----------  139 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSG--RIINISSMGGKIY-----------  139 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCC--EEEEEcchhhcCC-----------
Confidence             68999999997542211   1123455678898884    5555566667767  8999999542211           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHH---HhCCCC-eE----------EecCCc
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKA---VTSTDN-FE----------MWGDGK  229 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~---~~~~~~-~~----------i~~~~~  229 (366)
                          ......|+.+|.+.+.+.+.++.+   ++++++++++..+ ..+....   +..... ..          ......
T Consensus       140 ----~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (273)
T PRK06182        140 ----TPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTY  215 (273)
T ss_pred             ----CCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhh
Confidence                112346999999999988776644   4899999877655 2221111   100000 00          000011


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcCC-CCcEEecC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSDF-REPLNIGS  260 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~~-~~~~~i~~  260 (366)
                      ....+...+|+|++++.++.... ...|.++.
T Consensus       216 ~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~  247 (273)
T PRK06182        216 GSGRLSDPSVIADAISKAVTARRPKTRYAVGF  247 (273)
T ss_pred             ccccCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence            12345678888888888887643 44566543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.77  E-value=7.9e-18  Score=149.86  Aligned_cols=214  Identities=14%  Similarity=0.046  Sum_probs=147.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhc---CC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTS---GV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~---~~   97 (366)
                      .+++++||||+|+||+++++.|+++|++         |++++|+....... ...+..++.+|+++.+.+.++++   ++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   78 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGAR---------VVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAF   78 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999         99999876432211 11235788999999988887765   58


Q ss_pred             CEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           98 DNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      |+|||+||.........   .+....+..|+.++.++++++.+.    + ..  +||++||...+...            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~------------  144 (245)
T PRK07060         79 DGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG--SIVNVSSQAALVGL------------  144 (245)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc--EEEEEccHHHcCCC------------
Confidence            99999999753211111   223445678999999999888653    2 25  89999997654321            


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCC-eEEecCCcceeeeeeHHHHHHHH
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDN-FEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                         .+...|+.+|...+.+++.++.++   ++++..++++.+.. +.......... ..+. .......+++++|+++++
T Consensus       145 ---~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~~~  220 (245)
T PRK07060        145 ---PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPML-AAIPLGRFAEVDDVAAPI  220 (245)
T ss_pred             ---CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHH-hcCCCCCCCCHHHHHHHH
Confidence               224579999999999999888764   68888887654421 11111100000 0000 111234589999999999


Q ss_pred             HHHHhcC----CCCcEEecCCC
Q 044498          245 LRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       245 ~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..++..+    .++.+++.+|.
T Consensus       221 ~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        221 LFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HHHcCcccCCccCcEEeECCCc
Confidence            9999754    47788887664

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.8e-17  Score=149.26  Aligned_cols=206  Identities=17%  Similarity=0.111  Sum_probs=143.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++||||||+|+||+++++.|+++|++         |++++|+......      .....+.++.+|+.+.+.+..+++ 
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~---------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQ---------LVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999         9999987543211      112346788999999988777654 


Q ss_pred             ------CCCEEEEcccccCCcccccc-C---cchhhhhhHHHHHHHHHHHHH---cCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQS-N---HSVIMYKNTTISFDMLEAARM---NGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~-~---~~~~~~~nv~~~~~ll~a~~~---~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            ++|+|||+||.......... +   ....+..|+.++.++++.+..   .+..  ++|++||...+..      
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~iv~~sS~~~~~~------  143 (263)
T PRK06181         72 AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRG--QIVVVSSLAGLTG------  143 (263)
T ss_pred             HHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--EEEEEecccccCC------
Confidence                  68999999997543222111 2   234588999999999998853   2345  8999999766532      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                               ..+...|+.+|...+.+.+.++.+   .++++..++++.+.. +...... .........+.+...+++++
T Consensus       144 ---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  213 (263)
T PRK06181        144 ---------VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD-GDGKPLGKSPMQESKIMSAE  213 (263)
T ss_pred             ---------CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc-ccccccccccccccCCCCHH
Confidence                     123467999999999988877654   378888887765432 2222221 11111111222334789999


Q ss_pred             HHHHHHHHHHhcCCCCc
Q 044498          239 ECVEGVLRLIKSDFREP  255 (366)
Q Consensus       239 D~a~~~~~~l~~~~~~~  255 (366)
                      |+++++..++......+
T Consensus       214 dva~~i~~~~~~~~~~~  230 (263)
T PRK06181        214 ECAEAILPAIARRKRLL  230 (263)
T ss_pred             HHHHHHHHHhhCCCCEE
Confidence            99999999998654444

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.76  E-value=1.5e-17  Score=148.02  Aligned_cols=214  Identities=15%  Similarity=0.056  Sum_probs=141.9

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +..+++||||||||+||+++++.|+++|++         |+++.|+.....       ......+.++.+|+++.+.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGAN---------VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVER   72 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            335679999999999999999999999999         988877654211       1122346788899999988777


Q ss_pred             hhc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEeccc-ccCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSAC-IYPEF  157 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~-vyg~~  157 (366)
                      +++       ++|+|||+|+..........   .....+..|+.++.++++++...    +.+  +||++||.. ++|..
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~v~iss~~~~~~~~  150 (248)
T PRK05557         73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSG--RIINISSVVGLMGNP  150 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe--EEEEEcccccCcCCC
Confidence            654       68999999997543211111   22345778999998888888653    455  899999853 33321


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                      +...|+.+|.+.+.+++.++...   ++++++++++.+.. +......  ..............
T Consensus       151 ----------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~--~~~~~~~~~~~~~~  212 (248)
T PRK05557        151 ----------------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE--DVKEAILAQIPLGR  212 (248)
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh--HHHHHHHhcCCCCC
Confidence                            24569999999998888776643   67888887654311 1000000  00000000111223


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +.+++|+++++..++...    .++.|++.++.
T Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        213 LGQPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            678999999999888652    46789987653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4e-17  Score=147.57  Aligned_cols=159  Identities=17%  Similarity=0.088  Sum_probs=120.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++|+||||+|+||++++++|+++|++         |++++|+......  ..++.++.+|++|++++.++++      
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~---------V~~~~r~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYR---------VFGTSRNPARAAP--IPGVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE---------EEEEeCChhhccc--cCCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999         9999987654322  2356899999999998888765      


Q ss_pred             -CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       .+|++||+||........   ..+....+++|+.++.++++++    ++.+.+  +||++||...+..           
T Consensus        72 g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~--~iv~isS~~~~~~-----------  138 (270)
T PRK06179         72 GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSG--RIINISSVLGFLP-----------  138 (270)
T ss_pred             CCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--eEEEECCccccCC-----------
Confidence             479999999975321111   1223556889999988888774    556777  9999999654321           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP  208 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~  208 (366)
                          ......|+.+|...+.+.+.++.+   .+++++++++..+
T Consensus       139 ----~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~  178 (270)
T PRK06179        139 ----APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYT  178 (270)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCc
Confidence                112457999999999998887665   4899999977654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.76  E-value=5.8e-17  Score=144.92  Aligned_cols=212  Identities=15%  Similarity=0.117  Sum_probs=146.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +.+++|||||+|+||++++++|+++|++         |++++|...   ......+.++.+|+++.+.+.++++      
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~---------v~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAK---------VIGFDQAFL---TQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEecchh---hhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999         999988761   1122346889999999988887664      


Q ss_pred             -CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       .+|+|||+++.......   ...+....+++|+.+..++++++..    .+..  +||++||.....            
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~~ss~~~~~------------  140 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSG--AIVTVGSNAAHV------------  140 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC--EEEEECCchhcc------------
Confidence             48999999997542111   1223455688999999998888753    3445  899999964321            


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-HHHHHHhCC--CCe------EEecCCcceeeee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-FSRKAVTST--DNF------EMWGDGKQTRSLT  235 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~~~~~~~~~--~~~------~i~~~~~~~~~~i  235 (366)
                         +..+...|+.+|...+.+++.++.+   +++++.++++..+.. +........  ...      ...........++
T Consensus       141 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
T PRK08220        141 ---PRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIA  217 (252)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccC
Confidence               2234567999999999999888876   588888887664422 111111100  000      0001112234678


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++|+|++++.++...    .++++.+.+|.
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        218 RPQEIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             CHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            9999999999998643    45666776654

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7.2e-17  Score=146.29  Aligned_cols=227  Identities=13%  Similarity=0.064  Sum_probs=151.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|.++|++         |++.+|+.......      ....+.++.+|+++.+++.++++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~---------Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~   75 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGAR---------VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLAD   75 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            4678999999999999999999999999         99998875432111      12235788999999998877654


Q ss_pred             -------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcC-CCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNG-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .+|++||+||..........+   ....+++|+.++.++++++.    +.+ ..  ++|++||...+.     
T Consensus        76 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g--~iv~isS~~~~~-----  148 (275)
T PRK05876         76 EAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGG--HVVFTASFAGLV-----  148 (275)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC--EEEEeCChhhcc-----
Confidence                   489999999975432222222   23457899999999888875    333 34  899999976543     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHh-------CCCCeEEecCCc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVT-------STDNFEMWGDGK  229 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~-------~~~~~~i~~~~~  229 (366)
                                +..+...|+.+|...+.+.+.++.++   +++++++++..+.. +......       ........+...
T Consensus       149 ----------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (275)
T PRK05876        149 ----------PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLP  218 (275)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccccccccccc
Confidence                      22345679999998666666665543   78888887654422 1111110       001111223333


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFEN  278 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  278 (366)
                      ..+++++++|+|+.++..+.+.  +.|.+.  .......+.+...++..
T Consensus       219 ~~~~~~~~~dva~~~~~ai~~~--~~~~~~--~~~~~~~~~~~~~~~~~  263 (275)
T PRK05876        219 LQDDNLGVDDIAQLTADAILAN--RLYVLP--HAASRASIRRRFERIDR  263 (275)
T ss_pred             ccccCCCHHHHHHHHHHHHHcC--CeEEec--ChhhHHHHHHHHHHHHH
Confidence            4467899999999999999864  444444  23555666666655543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=1.3e-17  Score=149.25  Aligned_cols=216  Identities=14%  Similarity=0.102  Sum_probs=141.3

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      |.++++|+||||+|+||+++++.|+++|++         |++..+.......    ....++.++.+|+++.+++.++++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~---------vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGAR---------VVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFA   72 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCe---------EEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence            445678999999999999999999999999         8876554322111    011246789999999988777654


Q ss_pred             -------C-CCEEEEcccccCCc---------cccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEeccccc
Q 044498           96 -------G-VDNMSNLAADMGGM---------GFIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIY  154 (366)
Q Consensus        96 -------~-~d~vi~~a~~~~~~---------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vy  154 (366)
                             . +|++||+|+.....         .....+....++.|+.+..++++++..    .+..  ++|++||....
T Consensus        73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~iss~~~~  150 (253)
T PRK08642         73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFG--RIINIGTNLFQ  150 (253)
T ss_pred             HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCe--EEEEECCcccc
Confidence                   2 89999999853110         011122344588999999999988863    3445  89999985321


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcc
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~  230 (366)
                      .               +..|.+.|+.+|.+.+.+++.++.++   ++++..++++.+.. ....... ............
T Consensus       151 ~---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~  214 (253)
T PRK08642        151 N---------------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP-DEVFDLIAATTP  214 (253)
T ss_pred             C---------------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-HHHHHHHHhcCC
Confidence            1               23456689999999999999998875   56776665543311 1110000 000000001111


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+...+|+++++..++...    .++.+.+.+|.
T Consensus       215 ~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        215 LRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             cCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            234788999999999998643    46777777653

>PRK08017 oxidoreductase; Provisional

Probab=99.76  E-value=4.3e-17  Score=146.10  Aligned_cols=208  Identities=14%  Similarity=0.033  Sum_probs=141.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh--------
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT--------   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~--------   94 (366)
                      +++|+||||+|+||+++++.|+++|++         |++++|+..........++..+.+|+.+.+++.+++        
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   72 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYR---------VLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTD   72 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcC
Confidence            357999999999999999999999999         999998765432222235688999999988766543        


Q ss_pred             cCCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHH----HHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           95 SGVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDM----LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~l----l~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      ..+|.+||++|.......   ...+....++.|+.++.++    ++++++.+.+  ++|++||...+.            
T Consensus        73 ~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~--~iv~~ss~~~~~------------  138 (256)
T PRK08017         73 NRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEG--RIVMTSSVMGLI------------  138 (256)
T ss_pred             CCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC--EEEEEcCccccc------------
Confidence            247899999995432111   1122345688899887665    6666677777  899999963221            


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHH---HcCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTK---DFEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~---~~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                         +......|+.+|+..|.+.+.++.   ..++++++++++.+ ..+............+...+...+.+++++|++++
T Consensus       139 ---~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  215 (256)
T PRK08017        139 ---STPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPK  215 (256)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHH
Confidence               112356799999999988775533   45788988877654 23333322211111222223333567999999999


Q ss_pred             HHHHHhcCCCCcE
Q 044498          244 VLRLIKSDFREPL  256 (366)
Q Consensus       244 ~~~~l~~~~~~~~  256 (366)
                      +..+++.+...++
T Consensus       216 ~~~~~~~~~~~~~  228 (256)
T PRK08017        216 LRHALESPKPKLR  228 (256)
T ss_pred             HHHHHhCCCCCce
Confidence            9999987755543

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.2e-16  Score=142.42  Aligned_cols=205  Identities=17%  Similarity=0.070  Sum_probs=142.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----------cccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----------EDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----------~~~~~v~~~~~D~~~~~~l~   91 (366)
                      ++|+|+||||+|+||++++++|+++|++         |++++|...+...          .....+.++.+|+.+.+.+.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   75 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGAD---------VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATR   75 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe---------EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH
Confidence            4578999999999999999999999999         9987764322111          01224678999999998887


Q ss_pred             hhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHH-----HcCCCceeEEEEecccccCC
Q 044498           92 RMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAAR-----MNGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        92 ~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~-----~~~~~~~r~I~~SS~~vyg~  156 (366)
                      ++++       ++|+|||+||.........   .+....+..|+.++.++++++.     +.+.+  +||++||...+..
T Consensus        76 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~iv~~sS~~~~~~  153 (249)
T PRK12827         76 AALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGG--RIVNIASVAGVRG  153 (249)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCe--EEEEECCchhcCC
Confidence            7653       5899999999764221122   2234457899999999999988     45566  8999999755432


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH------HHHHHHhCCCCeEEecC
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA------FSRKAVTSTDNFEMWGD  227 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~------~~~~~~~~~~~~~i~~~  227 (366)
                      .               .+...|+.+|+..+.+++.++.+.   ++++++++++.+..      +......+..+      
T Consensus       154 ~---------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~------  212 (249)
T PRK12827        154 N---------------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVP------  212 (249)
T ss_pred             C---------------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCC------
Confidence            1               234579999999999888887764   78888887654411      11011110111      


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                         ...+...+|+++++..++...    .++.+++.+|
T Consensus       213 ---~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        213 ---VQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             ---CcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence               112457899999999988642    3677787765

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.75  E-value=5.9e-17  Score=145.66  Aligned_cols=213  Identities=14%  Similarity=0.055  Sum_probs=139.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......     .....+.++.+|+++.+++.++++ 
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGAR---------VVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAA   77 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHH
Confidence            4678999999999999999999999999         9999987431110     112235688999999887766553 


Q ss_pred             ------CCCEEEEcccccCC-cc---ccccCcchhhhhhHHHHHHHHH----HHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGG-MG---FIQSNHSVIMYKNTTISFDMLE----AARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~-~~---~~~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|++||+||.... ..   ....+....+.+|+.++..+++    .+++.+..  +||++||...++.     
T Consensus        78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~~~~-----  150 (260)
T PRK12823         78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG--AIVNVSSIATRGI-----  150 (260)
T ss_pred             HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--eEEEEcCccccCC-----
Confidence                  68999999985321 01   1112233446788887765544    44455666  8999999766531     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-H--HHHHHh---CCCCeEE------ec
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-F--SRKAVT---STDNFEM------WG  226 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~--~~~~~~---~~~~~~i------~~  226 (366)
                                  +..+|+.+|++.+.+.+.++.++   ++++..+++..+.. +  ......   ......+      ..
T Consensus       151 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T PRK12823        151 ------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTL  218 (260)
T ss_pred             ------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHh
Confidence                        13469999999999999998876   88888887654421 1  000000   0000000      00


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ......-+.+++|+++++..++...    .++++++.+|+
T Consensus       219 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        219 DSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             ccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            0111223557999999999998653    46788887764

>PRK06128 oxidoreductase; Provisional

Probab=99.75  E-value=1.2e-17  Score=153.46  Aligned_cols=217  Identities=14%  Similarity=0.061  Sum_probs=147.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--------ccccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++||||||+|+||++++++|+++|++         |++..+......        ......+.++.+|+++.+++.++
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~---------V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGAD---------IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCE---------EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence            4578999999999999999999999999         887765432110        01122356889999999887766


Q ss_pred             hc-------CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      ++       ++|++||+||......    ....+....+++|+.++.++++++...  ...  +||++||...|....  
T Consensus       125 ~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~iv~~sS~~~~~~~~--  200 (300)
T PRK06128        125 VERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGA--SIINTGSIQSYQPSP--  200 (300)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCC--EEEEECCccccCCCC--
Confidence            53       6899999999643211    122344567899999999999999764  224  899999987664321  


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                   ....|+.+|.+.+.+++.++.+.   |+++..++++.+. .+.............++.......+..
T Consensus       201 -------------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~  267 (300)
T PRK06128        201 -------------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQ  267 (300)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcC
Confidence                         23469999999999999988764   7888888655431 110000000000000111122334678


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .+|++.++..++...    .+++|++.+|..+
T Consensus       268 p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        268 PVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            999999999988653    4788999887654

>PRK06398 aldose dehydrogenase; Validated

Probab=99.75  E-value=1.2e-16  Score=143.51  Aligned_cols=210  Identities=17%  Similarity=0.115  Sum_probs=144.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +++++|||||+|.||.+++++|+++|++         |++++|+.....     .+.++.+|+++++++.++++      
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~---------Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSN---------VINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe---------EEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999         999998754321     35889999999988777653      


Q ss_pred             -CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||..........+.   ...+++|+.++..+++++.+    .+..  ++|++||...+..           
T Consensus        71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~-----------  137 (258)
T PRK06398         71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKG--VIINIASVQSFAV-----------  137 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe--EEEEeCcchhccC-----------
Confidence             6899999999753221222222   33478999999888877754    3455  8999999755431           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHHHHh--CCC-C------eEEecCCcceeeee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRKAVT--STD-N------FEMWGDGKQTRSLT  235 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~~~~--~~~-~------~~i~~~~~~~~~~i  235 (366)
                          ..+...|+.+|++.+.+.+.++.+++  +++..+.++.+ ..+......  .+. +      ...+........+.
T Consensus       138 ----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (258)
T PRK06398        138 ----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVG  213 (258)
T ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCc
Confidence                23456799999999999999988763  66666666544 222222110  000 0      00001111223456


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+|+|++++.++...    .++++.+.+|.
T Consensus       214 ~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        214 KPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             CHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            7999999999988643    46677776664

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-17  Score=147.92  Aligned_cols=214  Identities=12%  Similarity=0.039  Sum_probs=145.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++||||||+|+||+++++.|.++|++         |++++|+.......        ....+.++.+|+++.+++..++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~---------vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   72 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYR---------VAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALS   72 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHH
Confidence            468999999999999999999999999         99999875422110        0124688999999988777654


Q ss_pred             c-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEeccc-ccCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSAC-IYPEFK  158 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~-vyg~~~  158 (366)
                      +       .+|+|||+||..........   +....++.|+.++.++++++..    .+ ..  ++|++||.. .++.  
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~--~iv~~ss~~~~~~~--  148 (259)
T PRK12384         73 RGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQG--RIIQINSKSGKVGS--  148 (259)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCc--EEEEecCcccccCC--
Confidence            3       58999999997643222222   2244578899998777776654    34 34  899999853 2221  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH--HH----HHHHHHhC-C----CCeEE
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP--AA----FSRKAVTS-T----DNFEM  224 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~--~~----~~~~~~~~-~----~~~~i  224 (366)
                                    .....|+.+|++.+.+++.++.+   +++++..++++.+  ..    ++...... +    .....
T Consensus       149 --------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (259)
T PRK12384        149 --------------KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQY  214 (259)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHH
Confidence                          12457999999999988888754   5899988877632  11    11111110 0    00011


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +.+....+.+++++|+++++..++...    .+++|++.+|+.
T Consensus       215 ~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        215 YIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            122334567899999999999988653    468899988764

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.5e-17  Score=146.10  Aligned_cols=215  Identities=17%  Similarity=0.115  Sum_probs=144.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT-   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~-   94 (366)
                      ++++++||||+|.||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.+++ 
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   76 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGAT---------VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFD   76 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            4588999999999999999999999999         9999887542211      11224688999999999887766 


Q ss_pred             ------cCCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           95 ------SGVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        95 ------~~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            .++|+|||++|.........   .+....+..|+.+..++++++.+    .+..  +||++||...+...    
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~~----  150 (250)
T PRK12939         77 AAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRG--RIVNLASDTALWGA----  150 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe--EEEEECchhhccCC----
Confidence                  36899999999654211111   12334577899999888888754    2344  89999996543221    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                                 .+...|+.+|...+.+++.++.++   ++++..++++.+..-+.....................+++++
T Consensus       151 -----------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (250)
T PRK12939        151 -----------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPD  219 (250)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHH
Confidence                       224569999999999998887653   677777765543111100000000000001112334578999


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |+++++..++...    .++.+++.+|.
T Consensus       220 dva~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        220 DVAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHHHHHHhCccccCccCcEEEECCCc
Confidence            9999999998653    46788887764

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.3e-17  Score=146.17  Aligned_cols=215  Identities=16%  Similarity=0.095  Sum_probs=145.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc----ccccceEEEccCCChhHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME----DMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~----~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      +.+++|||||+|+||++++++|+++|++         |++++|+.......    ....+.++.+|+++++.+..+++  
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGAR---------VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTA   80 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHH
Confidence            5689999999999999999999999999         99999875432111    11135789999999988776653  


Q ss_pred             -----CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHH----HcCC-CceeEEEEecccccCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAAR----MNGV-MSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~-~~~r~I~~SS~~vyg~~~~~~  161 (366)
                           ++|+|||+||......    ....+....++.|+.++.++++++.    ..+. +  +|+++||.....      
T Consensus        81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~vv~~ss~~~~~------  152 (264)
T PRK12829         81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGG--VIIALSSVAGRL------  152 (264)
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCe--EEEEeccccccc------
Confidence                 6899999999752211    1112235568899999998888774    3344 4  688888743211      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh-----CCCCe-EEe---cCC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT-----STDNF-EMW---GDG  228 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~-----~~~~~-~i~---~~~  228 (366)
                               ...+...|+.+|...|.+++.++.+.   +++++++++..+ ..+......     .+... ...   ...
T Consensus       153 ---------~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (264)
T PRK12829        153 ---------GYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK  223 (264)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc
Confidence                     11124469999999999999887764   788988887654 112111111     00000 000   001


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .....+++++|+++++..++...    .++.|++.+|.
T Consensus       224 ~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        224 ISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             CCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            12235899999999999888542    47789998775

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8.7e-17  Score=143.91  Aligned_cols=217  Identities=16%  Similarity=0.065  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +++++|||||+|.||++++++|+++|++         |++++|+....  .....+.++.+|+.+.+++.++++      
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~---------v~~~~r~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGAT---------VVVCGRRAPET--VDGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCChhhh--hcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999         99999876431  122346889999999988777653      


Q ss_pred             -CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc-----CCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 -GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN-----GVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                       ++|+|||+||........   ..+....+.+|+.++..+++++...     +..  +||++||...+.           
T Consensus        74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g--~ii~isS~~~~~-----------  140 (252)
T PRK07856         74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGG--SIVNIGSVSGRR-----------  140 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc--EEEEEcccccCC-----------
Confidence             579999999965321111   1223456889999999999987641     334  899999965432           


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                          +......|+.+|...+.+++.++.+++  +.+..+.++.+ ..+......................+...+|++++
T Consensus       141 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~  216 (252)
T PRK07856        141 ----PSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWA  216 (252)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence                112356799999999999999988764  45555555433 22211111000000000011112235678999999


Q ss_pred             HHHHHhcC----CCCcEEecCCCcccH
Q 044498          244 VLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       244 ~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      +..++...    .++.+.+.+|...+.
T Consensus       217 ~~~L~~~~~~~i~G~~i~vdgg~~~~~  243 (252)
T PRK07856        217 CLFLASDLASYVSGANLEVHGGGERPA  243 (252)
T ss_pred             HHHHcCcccCCccCCEEEECCCcchHH
Confidence            99998653    477788877754443

>PRK09186 flagellin modification protein A; Provisional

Probab=99.75  E-value=1.3e-16  Score=143.10  Aligned_cols=215  Identities=16%  Similarity=0.062  Sum_probs=140.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++||||||+|+||+++++.|+++|++         |++++|+.......        ....+.++.+|++|++++.++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~---------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~   73 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGI---------VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEF   73 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHH
Confidence            5689999999999999999999999999         99998875432110        112345779999999988777


Q ss_pred             hc-------CCCEEEEcccccCCc---cccc---cCcchhhhhhHHHHHHHH----HHHHHcCCCceeEEEEecccccCC
Q 044498           94 TS-------GVDNMSNLAADMGGM---GFIQ---SNHSVIMYKNTTISFDML----EAARMNGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~---~~~~---~~~~~~~~~nv~~~~~ll----~a~~~~~~~~~r~I~~SS~~vyg~  156 (366)
                      ++       .+|+|||+|+.....   ....   ......+..|+.+...++    ..+++.+.+  +||++||.+.+..
T Consensus        74 ~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~  151 (256)
T PRK09186         74 LSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGG--NLVNISSIYGVVA  151 (256)
T ss_pred             HHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc--eEEEEechhhhcc
Confidence            64       389999999753210   0111   122344667777665554    445555677  9999999654432


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-----HHHHHHHHhCCCCeEEecCC
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-----AAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-----~~~~~~~~~~~~~~~i~~~~  228 (366)
                      .....   .++  .+..+...|+.+|...+.+.+.++.+   .++++.+++++.+     ..+...... ..        
T Consensus       152 ~~~~~---~~~--~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~-~~--------  217 (256)
T PRK09186        152 PKFEI---YEG--TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKK-CC--------  217 (256)
T ss_pred             ccchh---ccc--cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHh-cC--------
Confidence            11110   111  12223347999999999998887776   3688888876643     112111111 10        


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                       ....+++++|+|+++..++...    .++.+.+.+|.
T Consensus       218 -~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        218 -NGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             -CccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence             1124689999999999999653    36677776653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.74  E-value=5.6e-17  Score=164.41  Aligned_cols=234  Identities=17%  Similarity=0.103  Sum_probs=157.2

Q ss_pred             cCcccccccccC-CCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-----ccce
Q 044498            5 YGECTYDKLERE-SHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-----FCHE   78 (366)
Q Consensus         5 ~~~~~~~~~~~~-~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-----~~v~   78 (366)
                      ||.....++.+. +..+..+++||||||+|+||+++++.|.++|++         |++++|+.........     ..+.
T Consensus       403 ~~~~e~a~l~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~---------Vvl~~r~~~~~~~~~~~l~~~~~v~  473 (681)
T PRK08324        403 YWSLEQAKLQRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGAC---------VVLADLDEEAAEAAAAELGGPDRAL  473 (681)
T ss_pred             eehhhhhhhhcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCE---------EEEEeCCHHHHHHHHHHHhccCcEE
Confidence            555544444322 221225579999999999999999999999999         9999987653221111     2567


Q ss_pred             EEEccCCChhHHHhhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHH----HcCC-Cce
Q 044498           79 FHLVDLRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAAR----MNGV-MSL  143 (366)
Q Consensus        79 ~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~----~~~~-~~~  143 (366)
                      ++.+|+++.+++.++++       ++|+|||+||.........   ......+.+|+.+..++++++.    +.+. .  
T Consensus       474 ~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g--  551 (681)
T PRK08324        474 GVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGG--  551 (681)
T ss_pred             EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCc--
Confidence            89999999988777653       6899999999654321111   2234458899999998877664    3343 4  


Q ss_pred             eEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH---HHH-----
Q 044498          144 TFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA---AFS-----  212 (366)
Q Consensus       144 r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~---~~~-----  212 (366)
                      +||++||...+..               ..+...|+.+|...+.+++.++.++   ++++.++++..+.   .+.     
T Consensus       552 ~iV~vsS~~~~~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~  616 (681)
T PRK08324        552 SIVFIASKNAVNP---------------GPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI  616 (681)
T ss_pred             EEEEECCccccCC---------------CCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh
Confidence            8999999654321               1235679999999999999988776   4788777665441   111     


Q ss_pred             -HHHHhCCCCe----EEecCCcceeeeeeHHHHHHHHHHHHhc--C--CCCcEEecCCCcc
Q 044498          213 -RKAVTSTDNF----EMWGDGKQTRSLTFIDECVEGVLRLIKS--D--FREPLNIGSDEMV  264 (366)
Q Consensus       213 -~~~~~~~~~~----~i~~~~~~~~~~i~v~D~a~~~~~~l~~--~--~~~~~~i~~~~~~  264 (366)
                       ......+...    ..+.++...+.+++++|+|+++..++..  .  .++++++.+|...
T Consensus       617 ~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        617 EARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             hhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence             0111111111    1233445567899999999999998842  2  4788999887643

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.3e-17  Score=149.68  Aligned_cols=214  Identities=14%  Similarity=0.038  Sum_probs=147.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||.+++++|+++|++         |++++|.......       .....+.++.+|+++.+.+.+++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~---------V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~  115 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGAD---------IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAV  115 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            4578999999999999999999999999         9999887532111       11224578999999998877765


Q ss_pred             c-------CCCEEEEcccccCCcc-ccc---cCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG-FIQ---SNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      +       ++|+|||+|+...... ...   .+....+..|+.++.++++++...  ...  ++|++||...|.....  
T Consensus       116 ~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g--~iV~isS~~~~~~~~~--  191 (290)
T PRK06701        116 EETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGS--AIINTGSITGYEGNET--  191 (290)
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCC--eEEEEecccccCCCCC--
Confidence            3       5899999999643211 111   122446889999999999998763  234  8999999876643221  


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                   ...|+.+|.+.+.+++.++.++   ++++..++++.+ ..+...... ...............+.++
T Consensus       192 -------------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~  257 (290)
T PRK06701        192 -------------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQP  257 (290)
T ss_pred             -------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCH
Confidence                         2469999999999999998875   788888865543 111111000 0000001111233457889


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|++++++.++...    .+.++++.++.
T Consensus       258 ~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        258 EELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             HHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            99999999998753    46778887664

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.7e-17  Score=145.80  Aligned_cols=213  Identities=15%  Similarity=0.023  Sum_probs=145.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .+++||||||+|+||.+++++|+++|++         |++++|+......   .....+..+.+|+++.+++.++++   
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGAR---------VALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            5679999999999999999999999999         9999987542111   111234688999999988877653   


Q ss_pred             ----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccc-cCCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACI-YPEFKQLDTD  163 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~v-yg~~~~~~~~  163 (366)
                          ++|+|||+||.........   .+....+..|+.+..++++++..    .+..  +||++||... ++.       
T Consensus        85 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~-------  155 (255)
T PRK06841         85 SAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGG--KIVNLASQAGVVAL-------  155 (255)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCc--eEEEEcchhhccCC-------
Confidence                5899999999753211111   12234688999999999988765    3455  8999999643 221       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                               .....|+.+|.+.+.+.+.++.++   ++++..+.++.+.. +...... +..............+.+.+|
T Consensus       156 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  225 (255)
T PRK06841        156 ---------ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIPAGRFAYPEE  225 (255)
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCCCCCCcCHHH
Confidence                     124569999999999998888774   68887776554322 1111100 000000011112335789999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++++++.++...    .++++.+.+|.
T Consensus       226 va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        226 IAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             HHHHHHHHcCccccCccCCEEEECCCc
Confidence            999999998653    46778887764

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.9e-16  Score=141.06  Aligned_cols=210  Identities=10%  Similarity=-0.014  Sum_probs=142.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++++|||||+|+||++++++|+++|++         |+++.+.......       .....+.++.+|++|.+++.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFD---------VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRAL   77 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            35678999999999999999999999999         8877654322111       1123467899999999887776


Q ss_pred             hc-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|+|||+||.......   ...+....+++|+.++.++++++...    +..  ++|++||...+...  
T Consensus        78 ~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~~s~~~~~~~--  153 (258)
T PRK09134         78 VARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARG--LVVNMIDQRVWNLN--  153 (258)
T ss_pred             HHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--eEEEECchhhcCCC--
Confidence            53       48999999996532111   12233556889999999999887763    233  78888875433211  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcHH-------HHHHHHHhCCCCeEEecCCcc
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAPA-------AFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~~-------~~~~~~~~~~~~~~i~~~~~~  230 (366)
                                   .....|+.+|...+.+.+.++.+++  +.+..++++.+.       ..+..... ...         
T Consensus       154 -------------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~---------  210 (258)
T PRK09134        154 -------------PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHA-ATP---------  210 (258)
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHh-cCC---------
Confidence                         1134799999999999999888753  666666654321       11111111 110         


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCcccH
Q 044498          231 TRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVSI  266 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s~  266 (366)
                      ......++|+|++++.+++.+  .++.|++.+|..+++
T Consensus       211 ~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        211 LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence            112367999999999999865  477888887765444

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.74  E-value=2.4e-16  Score=141.58  Aligned_cols=209  Identities=14%  Similarity=0.026  Sum_probs=142.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~   81 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGAR---------VVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAE   81 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            4678999999999999999999999999         9999987543211      112245789999999988866543


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc-----CCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN-----GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .+|+|||+||..........   .....++.|+.++.++++++...     +..  +||++||...+..... 
T Consensus        82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~--~~v~~sS~~~~~~~~~-  158 (259)
T PRK08213         82 ETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYG--RIINVASVAGLGGNPP-  158 (259)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCe--EEEEECChhhccCCCc-
Confidence                   58999999996532211111   22345779999999999987654     556  8999999755432211 


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----HHHHHHH---HhCCCCeEEecCCc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----AAFSRKA---VTSTDNFEMWGDGK  229 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----~~~~~~~---~~~~~~~~i~~~~~  229 (366)
                                ...+...|+.+|+..+.+++.++.++   ++++.+++++.+     ..++...   .....++       
T Consensus       159 ----------~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-------  221 (259)
T PRK08213        159 ----------EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPL-------  221 (259)
T ss_pred             ----------cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCC-------
Confidence                      11245689999999999999988865   677777765432     1111111   1111111       


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                        .-+...+|++.++..++...    .++.+++.++
T Consensus       222 --~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        222 --GRLGDDEDLKGAALLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             --CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence              12345899999988888543    4667777655

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.74  E-value=5.7e-17  Score=144.68  Aligned_cols=212  Identities=13%  Similarity=0.046  Sum_probs=144.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......    .....+.++.+|+++.+++..+++  
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~---------vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGAD---------IVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSA   74 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            5689999999999999999999999999         9999986532111    112246889999999988776543  


Q ss_pred             -----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           ++|++||+||........   ..+....+..|+.+..++++++..    .+ ..  ++|++||...|....    
T Consensus        75 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~~~~~~----  148 (248)
T TIGR01832        75 VEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGG--KIINIASMLSFQGGI----  148 (248)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCe--EEEEEecHHhccCCC----
Confidence                 589999999975422111   123345578999999888888754    23 34  899999987664321    


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCe--EEecCCcceeeeee
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNF--EMWGDGKQTRSLTF  236 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~--~i~~~~~~~~~~i~  236 (366)
                                 ....|+.+|.+.+.+.+.++.++   ++++..++++.+. .+...... ....  .+. .......++.
T Consensus       149 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~-~~~~~~~~~~  215 (248)
T TIGR01832       149 -----------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-DEDRNAAIL-ERIPAGRWGT  215 (248)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-ChHHHHHHH-hcCCCCCCcC
Confidence                       13469999999999999998885   7888888765442 11111100 0000  000 0011245788


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .+|+|+++..++...    .++++.+.+|
T Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       216 PDDIGGPAVFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence            999999999999653    3555555544

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.74  E-value=6.2e-17  Score=144.52  Aligned_cols=200  Identities=14%  Similarity=0.041  Sum_probs=135.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc-----
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      |+|+||||+|+||.++++.|+++|++         |++++|++......   ....+.++.+|+.+.+++.++++     
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   71 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHK---------VIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999         99999876532211   12246789999999988776553     


Q ss_pred             --CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHH----HHHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 --GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEA----ARMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                        ++|+|||+||......    ....+....+++|+.++..++++    +++.+.+  ++|++||...+.          
T Consensus        72 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~----------  139 (248)
T PRK10538         72 WRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG--HIINIGSTAGSW----------  139 (248)
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEECCcccCC----------
Confidence              6999999999642111    11223345688899986555554    4556667  899999964321          


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHH-HHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRK-AVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~-~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                           +..+.+.|+.+|...+.+.+.++.++   ++.+.+++++.+. ..+.. ... +..... ........++..+|+
T Consensus       140 -----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~dv  212 (248)
T PRK10538        140 -----PYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFK-GDDGKA-EKTYQNTVALTPEDV  212 (248)
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhcc-CcHHHH-HhhccccCCCCHHHH
Confidence                 22335679999999999999888765   6788888777652 21111 111 110000 000001235689999


Q ss_pred             HHHHHHHHhcC
Q 044498          241 VEGVLRLIKSD  251 (366)
Q Consensus       241 a~~~~~~l~~~  251 (366)
                      |++++.++..+
T Consensus       213 A~~~~~l~~~~  223 (248)
T PRK10538        213 SEAVWWVATLP  223 (248)
T ss_pred             HHHHHHHhcCC
Confidence            99999998754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.74  E-value=6.4e-17  Score=143.96  Aligned_cols=215  Identities=16%  Similarity=0.084  Sum_probs=140.8

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +.+.++|+||||+|+||+++++.|.++|++         |+++.++.....       ......+.++.+|+++.+++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFA---------VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTR   72 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            346689999999999999999999999999         887776543211       1112346789999999988877


Q ss_pred             hhc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +++       ++|++||+||........   ..+....+.+|+.++.++++++.+.  ...  ++|++||...+.     
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~iv~~ss~~~~~-----  145 (245)
T PRK12937         73 LFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGG--RIINLSTSVIAL-----  145 (245)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCc--EEEEEeeccccC-----
Confidence            764       689999999965321111   1223445789999999999888654  234  899999864432     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                +..+.+.|+.+|...+.+++.++.++   ++.+..++++.+.. +...... ...............+..
T Consensus       146 ----------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~  214 (245)
T PRK12937        146 ----------PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS-AEQIDQLAGLAPLERLGT  214 (245)
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC-HHHHHHHHhcCCCCCCCC
Confidence                      12235679999999999998887764   66777776553311 1000000 000000000111123457


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ++|+++++..++...    .++++++.++
T Consensus       215 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        215 PEEIAAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HHHHHHHHHHHcCccccCccccEEEeCCC
Confidence            899999999988653    3667777654

>PRK05717 oxidoreductase; Validated

Probab=99.73  E-value=6.6e-17  Score=144.93  Aligned_cols=215  Identities=12%  Similarity=0.000  Sum_probs=141.1

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc--
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      .++++|+||||+|+||++++++|+++|++         |++++|+..+...   .....+.++.+|+++.+++.++++  
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQ---------VVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCE---------EEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999         9999876543211   112245789999999987765442  


Q ss_pred             -----CCCEEEEcccccCCcc-----ccccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMG-----FIQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           .+|++||+||......     ....+....+++|+.++.++++++.+.   ...  ++|++||...+...     
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g--~ii~~sS~~~~~~~-----  151 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNG--AIVNLASTRARQSE-----  151 (255)
T ss_pred             HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCc--EEEEEcchhhcCCC-----
Confidence                 4899999999753210     111223466889999999999999642   234  79999986543221     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcHHHHHHHHHhCCCCe-EEecCCcceeeeeeHHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAPAAFSRKAVTSTDNF-EMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~i~v~D  239 (366)
                                ...+.|+.+|.+.+.+.+.++.+++  +++..+++..+..-+..... ..+. ...........+.+++|
T Consensus       152 ----------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  220 (255)
T PRK05717        152 ----------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVED  220 (255)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHH
Confidence                      1235699999999999999988874  56666655433110000000 0000 00000001123678999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++.++..++...    .++.+.+.++.
T Consensus       221 va~~~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        221 VAAMVAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HHHHHHHHcCchhcCccCcEEEECCCc
Confidence            999999888643    36677776553

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.6e-16  Score=142.36  Aligned_cols=215  Identities=13%  Similarity=0.009  Sum_probs=142.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-ccccccceEEEccCCChhHHHhhhc-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-MEDMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~~~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      ++++++||||+|.||++++++|.++|++         |+++.+...... .....++.++.+|+++++++.++++     
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~---------v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAK---------VAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHH
Confidence            4588999999999999999999999999         888766543221 1111246899999999998877654     


Q ss_pred             --CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHH----HHHHHHcCCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 --GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDM----LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~l----l~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                        ++|++||+||........   ..+....+++|+.++..+    +..+++.+..  ++|++||...++..         
T Consensus        77 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g--~iv~isS~~~~~~~---------  145 (255)
T PRK06463         77 FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG--AIVNIASNAGIGTA---------  145 (255)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc--EEEEEcCHHhCCCC---------
Confidence              689999999975321111   222345588899996554    4445445555  89999997665321         


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EE---ecCCcceeeeeeHH
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EM---WGDGKQTRSLTFID  238 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i---~~~~~~~~~~i~v~  238 (366)
                           ..+...|+.+|++.+.+.+.++.++   ++++..+.++.+ ..+...... .... ..   .........+...+
T Consensus       146 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T PRK06463        146 -----AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS-QEEAEKLRELFRNKTVLKTTGKPE  219 (255)
T ss_pred             -----CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC-ccchHHHHHHHHhCCCcCCCcCHH
Confidence                 1224569999999999999988764   788877766544 111111000 0000 00   00111223456799


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |++++++.++...    .++.+.+.+|.
T Consensus       220 ~va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        220 DIANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            9999999998653    46778887765

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.8e-16  Score=141.91  Aligned_cols=214  Identities=13%  Similarity=0.048  Sum_probs=139.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC-cccc------ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK-NEHM------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~-~~~~------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||+|+||.+++++|.+.|++         |++..+.. ....      ......+..+.+|+++.+.+..++
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGAL---------VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALY   73 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe---------EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHH
Confidence            4679999999999999999999999999         88765332 2111      011123467889999877654332


Q ss_pred             -------------cCCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCC
Q 044498           95 -------------SGVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        95 -------------~~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~  156 (366)
                                   .++|++||+||..........+   .+..+++|+.++..+++++...  ...  ++|++||...+..
T Consensus        74 ~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g--~iv~isS~~~~~~  151 (252)
T PRK12747         74 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS--RIINISSAATRIS  151 (252)
T ss_pred             HHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCC--eEEEECCcccccC
Confidence                         1589999999964321111112   2445779999999999877654  223  8999999754321


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcce
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQT  231 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~  231 (366)
                                     ..+...|+.+|++.+.+++.++.++   ++++..+.++.+ ..+...... .... .+.......
T Consensus       152 ---------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~  215 (252)
T PRK12747        152 ---------------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYATTISAF  215 (252)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHHhcCcc
Confidence                           1234679999999999999987765   788888866544 222221111 0000 000001112


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+..++|+++++..++...    .++.+.+.+|.
T Consensus       216 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        216 NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             cCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            34678999999999988643    36677776653

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.4e-16  Score=142.90  Aligned_cols=215  Identities=14%  Similarity=0.078  Sum_probs=145.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGAD---------VVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVA   74 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHH
Confidence            4678999999999999999999999999         99999876432111      12246789999999988776553


Q ss_pred             -------CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|+|||+||......    ....+....+..|+.++..+++++...   ...  +||++||...+.      
T Consensus        75 ~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~ii~~sS~~~~~------  146 (258)
T PRK07890         75 LALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGG--SIVMINSMVLRH------  146 (258)
T ss_pred             HHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--EEEEEechhhcc------
Confidence                   6899999999653211    112233556889999999999988753   234  799999965432      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH----HHHHHhCC-CC-eEEe---cCC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF----SRKAVTST-DN-FEMW---GDG  228 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~----~~~~~~~~-~~-~~i~---~~~  228 (366)
                               +..+...|+.+|...+.+++.++.++   ++++..+++..+ ...    +....... .. ..+.   ...
T Consensus       147 ---------~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (258)
T PRK07890        147 ---------SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN  217 (258)
T ss_pred             ---------CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc
Confidence                     12235679999999999999988764   788888876644 111    11111000 00 0000   011


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .....+.+++|+++++..++...    .++++.+.++.
T Consensus       218 ~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        218 SDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             CCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            12234678999999999988642    45666666553

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.73  E-value=8.2e-17  Score=149.37  Aligned_cols=176  Identities=13%  Similarity=0.031  Sum_probs=123.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++|+||||+|+||.+++++|+++|++         |++++|+..+...      .....+.++.+|+++.+++.++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   75 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWH---------VIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD   75 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999987543211      112246789999999998877664


Q ss_pred             -------CCCEEEEcccccCCc----cccccCcchhhhhhHHHHHHHHHHHHH----cC--CCceeEEEEecccccCCCC
Q 044498           96 -------GVDNMSNLAADMGGM----GFIQSNHSVIMYKNTTISFDMLEAARM----NG--VMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~~r~I~~SS~~vyg~~~  158 (366)
                             ++|++||+||.....    .....+.+..+.+|+.++.++++++..    .+  ..  |+|++||...+....
T Consensus        76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~--riV~vsS~~~~~~~~  153 (322)
T PRK07453         76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDP--RLVILGTVTANPKEL  153 (322)
T ss_pred             HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcccccCcccc
Confidence                   489999999965321    112223456689999999888887764    22  34  899999976543210


Q ss_pred             C----CCCCcc----------------cccCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcH
Q 044498          159 Q----LDTDVK----------------ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAP  208 (366)
Q Consensus       159 ~----~~~~~~----------------e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~  208 (366)
                      .    .+....                ..+..+..|...|+.||++.+.+.+.+++++    ++.+..++++.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  227 (322)
T PRK07453        154 GGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCV  227 (322)
T ss_pred             CCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcc
Confidence            0    000000                0011245677899999999998888888775    678888877654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.73  E-value=6.2e-16  Score=137.07  Aligned_cols=189  Identities=12%  Similarity=-0.035  Sum_probs=137.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc---CC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS---GV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~---~~   97 (366)
                      ++++|+||||+|+||+++++.|+++|+ +         |++++|+..+... ...++.++.+|+.+.+.+.++++   .+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~---------V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~i   74 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAK---------VYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDV   74 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCccc---------EEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence            557899999999999999999999998 8         9999987654322 22356899999999998888765   58


Q ss_pred             CEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           98 DNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        98 d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      |+|||++|...... .   ...+....+..|+.+..++++++.+    .+..  +||++||...+..             
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~v~~sS~~~~~~-------------  139 (238)
T PRK08264         75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG--AIVNVLSVLSWVN-------------  139 (238)
T ss_pred             CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEEcChhhccC-------------
Confidence            99999999732111 1   1122344578899999999888653    4556  8999999765432             


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHH
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLR  246 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  246 (366)
                        ..+...|+.+|...+.+.+.++.+.   ++++.++++..+..-+   .. .      ..    ...+..+|+++.++.
T Consensus       140 --~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~---~~-~------~~----~~~~~~~~~a~~~~~  203 (238)
T PRK08264        140 --FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM---AA-G------LD----APKASPADVARQILD  203 (238)
T ss_pred             --CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc---cc-c------CC----cCCCCHHHHHHHHHH
Confidence              1235679999999999998887764   7888888876552111   00 0      00    114678999999998


Q ss_pred             HHhcC
Q 044498          247 LIKSD  251 (366)
Q Consensus       247 ~l~~~  251 (366)
                      .+...
T Consensus       204 ~~~~~  208 (238)
T PRK08264        204 ALEAG  208 (238)
T ss_pred             HHhCC
Confidence            88754

>PRK07985 oxidoreductase; Provisional

Probab=99.72  E-value=1.4e-16  Score=145.85  Aligned_cols=215  Identities=15%  Similarity=0.024  Sum_probs=144.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-c-------ccccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-M-------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~-------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.+++|||||+|+||.+++++|+++|++         |++.+|..... .       ......+.++.+|+++.+++.++
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~---------Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  118 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGAD---------VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSL  118 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE---------EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHH
Confidence            4478999999999999999999999999         98877643211 1       01122356889999999877765


Q ss_pred             hc-------CCCEEEEcccccCCc----cccccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGM----GFIQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      ++       ++|++||+||.....    .....+....+++|+.++..+++++...  ...  +||++||...+...   
T Consensus       119 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g--~iv~iSS~~~~~~~---  193 (294)
T PRK07985        119 VHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGA--SIITTSSIQAYQPS---  193 (294)
T ss_pred             HHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCC--EEEEECCchhccCC---
Confidence            43       589999999964211    1122334556889999999999988763  224  89999997765422   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                  .....|+.+|...+.+.+.++.+   +++++..++++.+. .+......................+..
T Consensus       194 ------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~  261 (294)
T PRK07985        194 ------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQ  261 (294)
T ss_pred             ------------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCC
Confidence                        12346999999999999988877   48898888766442 111000000000000011111223567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+|+|+++..++...    .++++.+.+|.
T Consensus       262 pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        262 PAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            999999999998653    36778877664

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.3e-15  Score=137.94  Aligned_cols=217  Identities=18%  Similarity=0.117  Sum_probs=161.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+||||||||++|++++++|+++|++         |.+..|++....... .+++++.+|+.++..+...+++.+.++++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~---------v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i   70 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHE---------VRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLI   70 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCE---------EEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEE
Confidence            57999999999999999999999999         999999987655555 77899999999999999999999999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      .+...      ... ...........+..+++. .+++  +++++|....   ..              .....|..+|.
T Consensus        71 ~~~~~------~~~-~~~~~~~~~~~~~a~~a~-~~~~--~~~~~s~~~~---~~--------------~~~~~~~~~~~  123 (275)
T COG0702          71 SGLLD------GSD-AFRAVQVTAVVRAAEAAG-AGVK--HGVSLSVLGA---DA--------------ASPSALARAKA  123 (275)
T ss_pred             ecccc------ccc-chhHHHHHHHHHHHHHhc-CCce--EEEEeccCCC---CC--------------CCccHHHHHHH
Confidence            88531      111 222233333334444443 3466  7888887432   11              22456899999


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCC-cHH----HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcE
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEK-APA----AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPL  256 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~-~~~----~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~  256 (366)
                      ..|..+...    +++++++|+. .+.    .+.......+.+....+.  ...+.+..+|++.++...+..+  .+++|
T Consensus       124 ~~e~~l~~s----g~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~~~~~~~  197 (275)
T COG0702         124 AVEAALRSS----GIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPATAGRTY  197 (275)
T ss_pred             HHHHHHHhc----CCCeEEEecCeeeeccchhHHHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCcccCcEE
Confidence            999988765    8998888743 222    223333333333333333  3678999999999999999875  68999


Q ss_pred             EecCCCcccHHHHHHHHHHhcCCCCCC
Q 044498          257 NIGSDEMVSINEMAEIILSFENEKLPI  283 (366)
Q Consensus       257 ~i~~~~~~s~~el~~~i~~~~g~~~~~  283 (366)
                      .+.+++..+..++++.+....|++...
T Consensus       198 ~l~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         198 ELAGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             EccCCceecHHHHHHHHHHHhCCccee
Confidence            999999999999999999999998665

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.5e-16  Score=140.28  Aligned_cols=160  Identities=18%  Similarity=0.109  Sum_probs=116.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++||||||||+||++++++|+++|++         |++++|+......      ....++.++.+|+++++.+.+++. 
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHN---------VIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW   72 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC
Confidence            468999999999999999999999999         9999886542211      112246889999999999988876 


Q ss_pred             CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHH----HHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLE----AARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      ++|+|||+||..........+   ....+.+|+.+..++.+    .+.+.+.+  +||++||...+..            
T Consensus        73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~~SS~~~~~~------------  138 (257)
T PRK09291         73 DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG--KVVFTSSMAGLIT------------  138 (257)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--eEEEEcChhhccC------------
Confidence            899999999965422111112   23456778887665554    44556667  9999999643211            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP  208 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~  208 (366)
                         ......|+.+|...|.+.+.++.+   .++++++++++.+
T Consensus       139 ---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~  178 (257)
T PRK09291        139 ---GPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPY  178 (257)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence               112457999999999988877654   5899999987643

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4.4e-16  Score=141.07  Aligned_cols=197  Identities=13%  Similarity=-0.012  Sum_probs=136.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhh-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMT-----   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~-----   94 (366)
                      ++++|+||||||.||++++++|+++|++         |++.+|+.......  ....+.++.+|+++++++.+++     
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGAR---------VAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99998876432211  1113688999999998876554     


Q ss_pred             --cCCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           95 --SGVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        95 --~~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                        .++|++||+||..........+   ....+++|+.++..+.+++.    +.+..  +||++||...+..         
T Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---------  143 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG--HVVNVASLAGKIP---------  143 (273)
T ss_pred             HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEcCccccCC---------
Confidence              3589999999975422122222   23457889988777666654    45666  8999999654321         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                            ..+...|+.+|...+.+.+.++.+.   +++++++++..+..-+   .. +..      ......++..+|+|+
T Consensus       144 ------~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~---~~-~~~------~~~~~~~~~~~~va~  207 (273)
T PRK07825        144 ------VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL---IA-GTG------GAKGFKNVEPEDVAA  207 (273)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh---hc-ccc------cccCCCCCCHHHHHH
Confidence                  1235679999999888777766553   8999999876552211   11 110      011123678999999


Q ss_pred             HHHHHHhcCCCC
Q 044498          243 GVLRLIKSDFRE  254 (366)
Q Consensus       243 ~~~~~l~~~~~~  254 (366)
                      .+..++.++...
T Consensus       208 ~~~~~l~~~~~~  219 (273)
T PRK07825        208 AIVGTVAKPRPE  219 (273)
T ss_pred             HHHHHHhCCCCE
Confidence            999999876443

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.9e-16  Score=138.78  Aligned_cols=208  Identities=14%  Similarity=0.126  Sum_probs=140.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ..++|+||||+|+||++++++|+++|++         |++++|......     ..+++.+|+++.+++.++++      
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~---------v~~~~r~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQ---------VIGIARSAIDDF-----PGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE---------EEEEeCCccccc-----CceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            3478999999999999999999999999         999998765421     12688999999988777654      


Q ss_pred             CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      ++|+|||+++........   ..+....+..|+.+..++.+++    ++.+..  ++|++||...|+..           
T Consensus        68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~-----------  134 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQG--RIVNICSRAIFGAL-----------  134 (234)
T ss_pred             CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEEccccccCCC-----------
Confidence            689999999975432111   1223345778888877666555    445666  89999998765431           


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCe--EEecCCcceeeeeeHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNF--EMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~--~i~~~~~~~~~~i~v~D~a~  242 (366)
                           ....|+.+|...+.+.+.++.++   +++++.++++.+.. ............  .+... .....+...+|++.
T Consensus       135 -----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~  208 (234)
T PRK07577        135 -----DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLAS-IPMRRLGTPEEVAA  208 (234)
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhc-CCCCCCcCHHHHHH
Confidence                 13579999999999988876654   88888887664421 111000000000  00000 01112447899999


Q ss_pred             HHHHHHhcC----CCCcEEecCCC
Q 044498          243 GVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       243 ~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++..++..+    .++.+.+.++.
T Consensus       209 ~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        209 AIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHHHhCcccCCccceEEEecCCc
Confidence            999998653    36777776553

>PLN02253 xanthoxin dehydrogenase

Probab=99.72  E-value=1.6e-16  Score=144.51  Aligned_cols=218  Identities=17%  Similarity=0.052  Sum_probs=144.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|.......     ....++.++.+|++|.+++.++++ 
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   87 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAK---------VCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDF   87 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHH
Confidence            4678999999999999999999999999         9999886532111     111246899999999988877664 


Q ss_pred             ------CCCEEEEcccccCCcc-----ccccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccc-cCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMG-----FIQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACI-YPEFKQ  159 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~v-yg~~~~  159 (366)
                            ++|++||+||......     ....+....+++|+.++.++++++...    +..  ++|++||... ++.   
T Consensus        88 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~ii~isS~~~~~~~---  162 (280)
T PLN02253         88 TVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKG--SIVSLCSVASAIGG---  162 (280)
T ss_pred             HHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc--eEEEecChhhcccC---
Confidence                  6999999999753211     112234556899999999988877642    334  7898888532 221   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCC----C----eEEecC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTD----N----FEMWGD  227 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~----~----~~i~~~  227 (366)
                                   .....|+.+|.+.|.+.+.++.++   ++++..++++.+.. +.........    .    ......
T Consensus       163 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
T PLN02253        163 -------------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGK  229 (280)
T ss_pred             -------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhc
Confidence                         113469999999999999988875   67777776554311 1000000000    0    000000


Q ss_pred             Ccce-eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          228 GKQT-RSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       228 ~~~~-~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      .... ...++++|+++++..++...    .++.+++.+|...+.
T Consensus       230 ~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        230 NANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             CCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence            0011 22478999999999998653    467888887754433

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.3e-16  Score=139.16  Aligned_cols=198  Identities=16%  Similarity=0.039  Sum_probs=137.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +|++++||||+|.||++++++|+++|++         |++++|+.......      ...++.++.+|+++.+.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWD---------LALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIA   75 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHH
Confidence            5678999999999999999999999999         99999876532111      12346789999999988777654


Q ss_pred             -------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|++||+||.......   ...+....+.+|+.++.++++.+    .+.+..  ++|++||...++..    
T Consensus        76 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~isS~~~~~~~----  149 (241)
T PRK07454         76 ELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGG--LIINVSSIAARNAF----  149 (241)
T ss_pred             HHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCc--EEEEEccHHhCcCC----
Confidence                   58999999996432111   11223445778998887777665    444556  89999998766432    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                                 .+...|+.+|...+.+.+.++.+   .++++.+++++.+..-+   .. .....  .. .....++..+
T Consensus       150 -----------~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~---~~-~~~~~--~~-~~~~~~~~~~  211 (241)
T PRK07454        150 -----------PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL---WD-TETVQ--AD-FDRSAMLSPE  211 (241)
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc---cc-ccccc--cc-cccccCCCHH
Confidence                       23457999999999988877654   48999999877553211   11 00000  00 0112357899


Q ss_pred             HHHHHHHHHHhcCC
Q 044498          239 ECVEGVLRLIKSDF  252 (366)
Q Consensus       239 D~a~~~~~~l~~~~  252 (366)
                      |+|+++..++..+.
T Consensus       212 ~va~~~~~l~~~~~  225 (241)
T PRK07454        212 QVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHHHHcCCc
Confidence            99999999998763

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.72  E-value=1.4e-16  Score=141.69  Aligned_cols=213  Identities=17%  Similarity=0.112  Sum_probs=140.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++||||+|+||+++++.|.++|++         |++++|+......       .....+.++.+|+.+.+.+.++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~---------vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   72 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYR---------VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALA   72 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCE---------EEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            458999999999999999999999999         9999887531110       112246899999999988777653


Q ss_pred             -------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHH----HHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLE----AARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|++||++|........   ..+....+..|+.+..++.+    .+++.+..  +||++||...+...    
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~iss~~~~~~~----  146 (245)
T PRK12824         73 EIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYG--RIINISSVNGLKGQ----  146 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe--EEEEECChhhccCC----
Confidence                   589999999975321111   22234457889999888754    44555666  89999997554322    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                 .+...|+.+|.+.+.+++.++.+.   ++++.++++..+. .+......  ..............+...
T Consensus       147 -----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~  213 (245)
T PRK12824        147 -----------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP--EVLQSIVNQIPMKRLGTP  213 (245)
T ss_pred             -----------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH--HHHHHHHhcCCCCCCCCH
Confidence                       123469999999998888877643   7787777654331 11100000  000000001112335578


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +|+++++..++...    .++.+++.+|..
T Consensus       214 ~~va~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        214 EEIAAAVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             HHHHHHHHHHcCccccCccCcEEEECCCee
Confidence            99999998888542    478899888754

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=5.1e-16  Score=137.73  Aligned_cols=196  Identities=13%  Similarity=0.035  Sum_probs=137.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++++||||+|+||.+++++|+++|++         |++++|+......      ....++.++.+|+++++++.++++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVN---------VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIE   76 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHH
Confidence            3468999999999999999999999999         9999987643211      112246789999999998877764


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|+|||++|..........   +....+..|+.++.++++++..    .+.+  ++|++||...+...    
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~ss~~~~~~~----  150 (239)
T PRK07666         77 QLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSG--DIINISSTAGQKGA----  150 (239)
T ss_pred             HHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc--EEEEEcchhhccCC----
Confidence                   69999999996532111111   2245588999998888887764    4556  89999996543221    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                                 .+...|+.+|.+.+.+++.++.+   .++++++++++.+..-+..-..    ... +.   ...++..+
T Consensus       151 -----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----~~~-~~---~~~~~~~~  211 (239)
T PRK07666        151 -----------AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG----LTD-GN---PDKVMQPE  211 (239)
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc----ccc-cC---CCCCCCHH
Confidence                       23456999999999988887655   4899999987755322211100    000 11   12357799


Q ss_pred             HHHHHHHHHHhcC
Q 044498          239 ECVEGVLRLIKSD  251 (366)
Q Consensus       239 D~a~~~~~~l~~~  251 (366)
                      |+++++..++..+
T Consensus       212 ~~a~~~~~~l~~~  224 (239)
T PRK07666        212 DLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999875

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.6e-16  Score=141.79  Aligned_cols=214  Identities=13%  Similarity=-0.006  Sum_probs=137.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++.+|||||+|+||++++++|+++|++         |+...+......       ......+.++.+|+++.+++.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~---------vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   72 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYA---------VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFE   72 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe---------EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHH
Confidence            457999999999999999999999998         877764432111       0112235789999999988877664


Q ss_pred             -------CCCEEEEcccccCCccc----cccCcchhhhhhHHHHHHHHHHHHHcC-----CCceeEEEEecccc-cCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF----IQSNHSVIMYKNTTISFDMLEAARMNG-----VMSLTFFFVSSACI-YPEFK  158 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~-----~~~~r~I~~SS~~v-yg~~~  158 (366)
                             .+|+|||+|+.......    ...+....+.+|+.++.++++++.+.-     .+..++|++||... ++...
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  152 (248)
T PRK06123         73 AVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG  152 (248)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC
Confidence                   68999999997532111    111223568899999998888776531     11116999999643 33211


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                     ....|+.+|+..+.+++.++.++   ++++.++++..+. .+...... ...+..........-+
T Consensus       153 ---------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~-~~~~~~~~~~~p~~~~  216 (248)
T PRK06123        153 ---------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE-PGRVDRVKAGIPMGRG  216 (248)
T ss_pred             ---------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCC-HHHHHHHHhcCCCCCC
Confidence                           11359999999999999888775   7999988766442 11110000 0000000000011123


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .+++|+++++..++...    .++.|++.++
T Consensus       217 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        217 GTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            47899999999988653    4678888765

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.1e-15  Score=135.36  Aligned_cols=205  Identities=16%  Similarity=0.028  Sum_probs=139.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++|+||||+|+||++++++|+++|++         |++++|++......     ...++.++.+|+.+.+++.++++ 
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~   75 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYK---------VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDA   75 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE---------EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHH
Confidence            3578999999999999999999999999         99999876432111     01346889999999988777654 


Q ss_pred             ------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                            ++|+|||+++........   ..+....+..|+.++.++++++...   +.+  ++|++||...+.        
T Consensus        76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~iv~~ss~~~~~--------  145 (237)
T PRK07326         76 IVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGG--YIINISSLAGTN--------  145 (237)
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCe--EEEEECChhhcc--------
Confidence                  689999999865321111   1123355888999999888877642   445  799999965432        


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                             +..+...|+.+|+..+.+.+.++.+   .+++++.+++..+..-+   .. ..+    ..  .....+..+|+
T Consensus       146 -------~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~---~~-~~~----~~--~~~~~~~~~d~  208 (237)
T PRK07326        146 -------FFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF---NG-HTP----SE--KDAWKIQPEDI  208 (237)
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc---cc-ccc----ch--hhhccCCHHHH
Confidence                   1223556999999999888887654   48899999876542211   11 000    00  00113678999


Q ss_pred             HHHHHHHHhcCC---CCcEEecCCC
Q 044498          241 VEGVLRLIKSDF---REPLNIGSDE  262 (366)
Q Consensus       241 a~~~~~~l~~~~---~~~~~i~~~~  262 (366)
                      ++++..++..+.   .....+.++.
T Consensus       209 a~~~~~~l~~~~~~~~~~~~~~~~~  233 (237)
T PRK07326        209 AQLVLDLLKMPPRTLPSKIEVRPSR  233 (237)
T ss_pred             HHHHHHHHhCCccccccceEEecCC
Confidence            999999997763   3344454443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.6e-15  Score=136.25  Aligned_cols=216  Identities=14%  Similarity=0.112  Sum_probs=144.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-------   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-------   94 (366)
                      ++++||||||+|.||++++++|.++|++         |++++|......   ...+.++.+|+++.+++.+++       
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~---------v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGAR---------VVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCE---------EEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999         999998765422   224578999999998776544       


Q ss_pred             cCCCEEEEcccccCCc-----cccccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           95 SGVDNMSNLAADMGGM-----GFIQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                      .++|+|||+||.....     .....+....+++|+.++.++++++    ++.+..  ++|++||...+..         
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~ii~isS~~~~~~---------  144 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSG--VIIHVTSIQRRLP---------  144 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc--EEEEEecccccCC---------
Confidence            3689999999954211     0112234556888999987776554    444555  8999999654321         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HH----HHHHHHhC-CCCe-EEe------cCCc
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AA----FSRKAVTS-TDNF-EMW------GDGK  229 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~----~~~~~~~~-~~~~-~i~------~~~~  229 (366)
                           ...+...|+.+|...+.+++.++.++   ++++..++++.+ ..    +....... .... ...      ....
T Consensus       145 -----~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK06523        145 -----LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGI  219 (260)
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccC
Confidence                 11235679999999999999888764   688888876543 11    11111100 0000 000      0001


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      ....+...+|+++++..++...    .++.+.+.+|...|
T Consensus       220 p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        220 PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             ccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            1123557899999999998642    47788888776543

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.71  E-value=3e-16  Score=139.56  Aligned_cols=212  Identities=14%  Similarity=0.082  Sum_probs=140.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhh----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMT----   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~----   94 (366)
                      +++++|||||+|+||+++++.|+++|+.         |++.+|........   ....+.++.+|+++.+++.+++    
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAI---------VGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAE   75 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            4679999999999999999999999998         88887765422111   1224678899999998877764    


Q ss_pred             ---cCCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccc-cCCCCCCCCC
Q 044498           95 ---SGVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACI-YPEFKQLDTD  163 (366)
Q Consensus        95 ---~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~v-yg~~~~~~~~  163 (366)
                         .++|+|||+||.......   ...+....+.+|+.+..++++++.+    .+..  +||++||... ++..      
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~~------  147 (245)
T PRK12936         76 ADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYG--RIINITSVVGVTGNP------  147 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCC--EEEEECCHHhCcCCC------
Confidence               358999999997532111   1223455688999998888887643    3556  8999999643 3321      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                                ....|+.+|...+.+.+.++.+.   ++++..+++..+.. +.......... .+ ........+...+|
T Consensus       148 ----------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~  215 (245)
T PRK12936        148 ----------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKE-AI-MGAIPMKRMGTGAE  215 (245)
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHH-HH-hcCCCCCCCcCHHH
Confidence                      13469999998888887776653   68888887654421 11110000000 00 00111223567999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++++..++...    .++.+++.+|.
T Consensus       216 ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        216 VASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHHHHHHHcCccccCcCCCEEEECCCc
Confidence            999999888543    46788888764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.4e-16  Score=140.47  Aligned_cols=192  Identities=13%  Similarity=-0.018  Sum_probs=133.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc--
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      +++|+||||+|+||++++++|+++|++         |++++|+.......     ....+.++.+|+++.+++.++++  
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~   72 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGAT---------LGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF   72 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence            578999999999999999999999999         99999875432111     00146899999999988877653  


Q ss_pred             -----CCCEEEEcccccCCcccc----ccCcchhhhhhHHHHHHHHH----HHHHcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFI----QSNHSVIMYKNTTISFDMLE----AARMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~----~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           .+|++||+||........    ..+....+++|+.++.++++    ++++.+..  +||++||...+..      
T Consensus        73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~--~iv~isS~~~~~~------  144 (257)
T PRK07024         73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRG--TLVGIASVAGVRG------  144 (257)
T ss_pred             HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCC--EEEEEechhhcCC------
Confidence                 389999999975421111    12334568899999888776    44555666  8999998644311      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                               ......|+.+|...+.+.+.++.+   .+++++.+++..+..-+.   . ....       ....++..++
T Consensus       145 ---------~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~---~-~~~~-------~~~~~~~~~~  204 (257)
T PRK07024        145 ---------LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMT---A-HNPY-------PMPFLMDADR  204 (257)
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchh---h-cCCC-------CCCCccCHHH
Confidence                     112456999999999999887644   489999998765522111   1 0000       0011357999


Q ss_pred             HHHHHHHHHhcC
Q 044498          240 CVEGVLRLIKSD  251 (366)
Q Consensus       240 ~a~~~~~~l~~~  251 (366)
                      +++.+..++...
T Consensus       205 ~a~~~~~~l~~~  216 (257)
T PRK07024        205 FAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHhCC
Confidence            999999998764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.70  E-value=7.7e-16  Score=139.55  Aligned_cols=160  Identities=14%  Similarity=-0.002  Sum_probs=117.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-------c
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-------S   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-------~   95 (366)
                      |+++|||||+|+||++++++|.++|++         |++++|+..........++.++.+|+++.+++.+++       .
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   71 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYE---------VWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHG   71 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999         999998765332222234678999999998877665       3


Q ss_pred             CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           96 GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      ++|+|||+||.........   .+....+++|+.++.++++++...   +..  ++|++||...+..             
T Consensus        72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g--~iv~isS~~~~~~-------------  136 (274)
T PRK05693         72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRG--LVVNIGSVSGVLV-------------  136 (274)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC--EEEEECCccccCC-------------
Confidence            6899999999653211111   233456889999998888887542   334  7999998543211             


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP  208 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~  208 (366)
                        ......|+.+|...+.+.+.++.+   +|++++.++++.+
T Consensus       137 --~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v  176 (274)
T PRK05693        137 --TPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAI  176 (274)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcc
Confidence              112457999999999988887665   5888888877655

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.3e-16  Score=141.67  Aligned_cols=202  Identities=13%  Similarity=0.050  Sum_probs=134.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      |+|+||||||+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++  
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i   71 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWR---------LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQAC   71 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            47999999999999999999999999         9999887543211      112345789999999988777653  


Q ss_pred             -----CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHH----HHHcCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEA----ARMNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a----~~~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|++||+||..........   +.+..+.+|+.+..++.++    +++.+..  ++|++||...+..       
T Consensus        72 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~vsS~~~~~~-------  142 (270)
T PRK05650         72 EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSG--RIVNIASMAGLMQ-------  142 (270)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC--EEEEECChhhcCC-------
Confidence                 68999999997643212111   2233467888777665555    5566667  8999999754432       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                              ......|+.+|+..+.+.+.++.++   ++.+++++++.+.. +............-.........++.++|
T Consensus       143 --------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (270)
T PRK05650        143 --------GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAAD  214 (270)
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHH
Confidence                    1235679999999998888888774   78888887665422 11111110000000000001123578999


Q ss_pred             HHHHHHHHHhcC
Q 044498          240 CVEGVLRLIKSD  251 (366)
Q Consensus       240 ~a~~~~~~l~~~  251 (366)
                      +|+.++.++...
T Consensus       215 vA~~i~~~l~~~  226 (270)
T PRK05650        215 IADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHhCC
Confidence            999999998764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.5e-16  Score=141.12  Aligned_cols=215  Identities=15%  Similarity=0.080  Sum_probs=140.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++++||||+|.||.+++++|.+.|++         |++++|+..+....      ....+.++.+|+++++++.++++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAK---------VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVA   75 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         99999876432111      12245788999999988777654


Q ss_pred             -------CCCEEEEcccccCCcc-ccc---cCcchhhhhhHHHHHHHHH----HHHHcCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG-FIQ---SNHSVIMYKNTTISFDMLE----AARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||...... ...   .+....+.+|+.+...+.+    .+++.+..  ++|++||...+..    
T Consensus        76 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~--~iv~~sS~~~~~~----  149 (254)
T PRK07478         76 LAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGG--SLIFTSTFVGHTA----  149 (254)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--eEEEEechHhhcc----
Confidence                   6899999999753211 111   2234558899987766655    44445555  8999999654421    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~i  235 (366)
                                +..+...|+.+|++.+.+.+.++.++   ++++..+.++.+ ..+...... .... ...........+.
T Consensus       150 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~  218 (254)
T PRK07478        150 ----------GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD-TPEALAFVAGLHALKRMA  218 (254)
T ss_pred             ----------CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC-CHHHHHHHHhcCCCCCCc
Confidence                      11235679999999999999988875   577777765543 111111000 0000 0000001112356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+|++++++.++...    .++++.+.+|.
T Consensus       219 ~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        219 QPEEIAQAALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             CHHHHHHHHHHHcCchhcCCCCCeEEeCCch
Confidence            7999999999988653    46677776553

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=1.7e-16  Score=141.37  Aligned_cols=213  Identities=16%  Similarity=0.034  Sum_probs=140.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||||+||.+++++|+++|++         |+++ +|+......      .....+.++.+|+++++.+.+++
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~---------v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAK---------VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLV   74 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            4678999999999999999999999999         9888 776543211      11224688999999999887765


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|+|||++|........   ..+....+..|+.+..++++++..    .+.+  +||++||...+...   
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~v~~sS~~~~~~~---  149 (247)
T PRK05565         75 EQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSG--VIVNISSIWGLIGA---  149 (247)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEECCHhhccCC---
Confidence            4       699999999975321111   112345578899998888777654    3455  79999996543221   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                  .....|+.+|...+.+++.++.+.   +++++.++++.+..-+.+.........+ ........+...
T Consensus       150 ------------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~  216 (247)
T PRK05565        150 ------------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGL-AEEIPLGRLGKP  216 (247)
T ss_pred             ------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHH-HhcCCCCCCCCH
Confidence                        123469999999888888876654   7888888665442111100000000000 000112335689


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      +|+++++..++...    .++.+++.++
T Consensus       217 ~~va~~~~~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        217 EEIAKVVLFLASDDASYITGQIITVDGG  244 (247)
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEecCC
Confidence            99999999998653    4667777655

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.7e-16  Score=140.72  Aligned_cols=214  Identities=18%  Similarity=0.073  Sum_probs=140.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .++++|+||||+|+||.+++++|.++|++         |++++|+......      .....+.++.+|+.+.+++..++
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   76 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAH---------VIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALF   76 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            35678999999999999999999999999         9999987542211      11123578899999998877654


Q ss_pred             c-------CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       .+|++||+|+......    ....+....+..|+.+...+++++    ++.+..  ++|++||...+.    
T Consensus        77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~----  150 (252)
T PRK07035         77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGG--SIVNVASVNGVS----  150 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCc--EEEEECchhhcC----
Confidence            3       5899999999542111    111223456889999988777666    444556  899999853321    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSL  234 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~  234 (366)
                                 +..+...|+.+|++.+.+++.++.++   ++++..+.++.+ ..+...... .... ...........+
T Consensus       151 -----------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~  218 (252)
T PRK07035        151 -----------PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK-NDAILKQALAHIPLRRH  218 (252)
T ss_pred             -----------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC-CHHHHHHHHccCCCCCc
Confidence                       12345679999999999999988765   677777755433 112111110 0000 000000011235


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ...+|+|+++..++...    .++++.+.+|
T Consensus       219 ~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        219 AEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             CCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            67899999999988653    4667777654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.7e-15  Score=135.20  Aligned_cols=197  Identities=13%  Similarity=0.094  Sum_probs=137.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++||||+|+||++++++|+++|++         |++++|+.......        ....+.++.+|+++.+++.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRD---------LALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVF   72 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHH
Confidence            568999999999999999999999999         99999876432111        1234688999999998776654


Q ss_pred             c-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||.........   ......+++|+.+..++++++.    +.+.+  +||++||...+...   
T Consensus        73 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~---  147 (248)
T PRK08251         73 AEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSG--HLVLISSVSAVRGL---  147 (248)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--eEEEEeccccccCC---
Confidence            3       6899999999754321111   1223457899999888887764    44666  89999996432211   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                 ..+...|+.+|...+.+...++.++   +++++.+++..+..-+.....         .   ....+..
T Consensus       148 -----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~---~~~~~~~  204 (248)
T PRK08251        148 -----------PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK---------S---TPFMVDT  204 (248)
T ss_pred             -----------CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc---------c---CCccCCH
Confidence                       1234679999999999988887664   578888877655322211111         0   1124678


Q ss_pred             HHHHHHHHHHHhcCCCCcE
Q 044498          238 DECVEGVLRLIKSDFREPL  256 (366)
Q Consensus       238 ~D~a~~~~~~l~~~~~~~~  256 (366)
                      +|.++.++..++.....+|
T Consensus       205 ~~~a~~i~~~~~~~~~~~~  223 (248)
T PRK08251        205 ETGVKALVKAIEKEPGRAA  223 (248)
T ss_pred             HHHHHHHHHHHhcCCCeEE
Confidence            9999999999987654444

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.70  E-value=6.6e-16  Score=142.27  Aligned_cols=169  Identities=13%  Similarity=-0.051  Sum_probs=118.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------c--ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------E--DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~--~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++|+||||+|+||++++++|+++|++         |++++|+......      .  ....+.++.+|+++.+++.++
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~---------vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~   85 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAH---------VVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAA   85 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHH
Confidence            5679999999999999999999999999         9999987543211      0  123467899999999887776


Q ss_pred             hc-------CCCEEEEcccccCCcc-ccccCcchhhhhhHHH----HHHHHHHHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMG-FIQSNHSVIMYKNTTI----SFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~-~~~~~~~~~~~~nv~~----~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      ++       ++|++||+||...... ....+.+..+.+|+.+    +..+++.+++.+..  +||++||...+.......
T Consensus        86 ~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~--~iV~vSS~~~~~~~~~~~  163 (306)
T PRK06197         86 ADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGS--RVVTVSSGGHRIRAAIHF  163 (306)
T ss_pred             HHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCC--EEEEECCHHHhccCCCCc
Confidence            53       5899999999754321 1123345668899998    66677777666666  999999976432111111


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEe
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLV  203 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~  203 (366)
                      .  ......+..+...|+.+|++.+.+.+.++.++   ++++.++
T Consensus       164 ~--~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v  206 (306)
T PRK06197        164 D--DLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAV  206 (306)
T ss_pred             c--ccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEE
Confidence            0  11111234567789999999999999988775   5555444

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.70  E-value=5.5e-16  Score=145.40  Aligned_cols=243  Identities=13%  Similarity=0.051  Sum_probs=166.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------------------ccccceEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------------------DMFCHEFH   80 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------------------~~~~v~~~   80 (366)
                      +.++|||||||||+|.-+++.|+..--+++      +++.+-|.+......                     ...++..+
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~------~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi   84 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVK------RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPI   84 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcc------eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceec
Confidence            678999999999999999999998632211      177777765432110                     12357789


Q ss_pred             EccCCCh------hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccc
Q 044498           81 LVDLRVM------DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACI  153 (366)
Q Consensus        81 ~~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~v  153 (366)
                      .||++++      .++..+.+++++|||+||.+..    .......+.+|+.|+.++++.|++.. .+  -|+++||+.+
T Consensus        85 ~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrF----de~l~~al~iNt~Gt~~~l~lak~~~~l~--~~vhVSTAy~  158 (467)
T KOG1221|consen   85 AGDISEPDLGISESDLRTLADEVNIVIHSAATVRF----DEPLDVALGINTRGTRNVLQLAKEMVKLK--ALVHVSTAYS  158 (467)
T ss_pred             cccccCcccCCChHHHHHHHhcCCEEEEeeeeecc----chhhhhhhhhhhHhHHHHHHHHHHhhhhh--eEEEeehhhe
Confidence            9999875      3455556789999999997642    33445668899999999999999975 66  7999999876


Q ss_pred             cCCCCC---CCCCccc----------ccCC------------CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH
Q 044498          154 YPEFKQ---LDTDVKE----------SEAW------------PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP  208 (366)
Q Consensus       154 yg~~~~---~~~~~~e----------~~~~------------~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~  208 (366)
                      -.....   .+.+..+          +++.            .....+.|.-+|+.+|.++.+++.  +++++|+|+..+
T Consensus       159 n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI  236 (467)
T KOG1221|consen  159 NCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSII  236 (467)
T ss_pred             ecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCce
Confidence            521111   0000011          0000            112356799999999999988765  799999997655


Q ss_pred             HH--------HHHHHHh---------CCCCeEEecCCcceeeeeeHHHHHHHHHHHHh-c----C--CCCcEEecCCC--
Q 044498          209 AA--------FSRKAVT---------STDNFEMWGDGKQTRSLTFIDECVEGVLRLIK-S----D--FREPLNIGSDE--  262 (366)
Q Consensus       209 ~~--------~~~~~~~---------~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~-~----~--~~~~~~i~~~~--  262 (366)
                      .+        ++.....         +|.--.+..+.+..-+++.+|.++.+++.+.- +    .  ...+||++++.  
T Consensus       237 ~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~N  316 (467)
T KOG1221|consen  237 TSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDN  316 (467)
T ss_pred             eccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccC
Confidence            22        3332221         12222333566677899999999999987651 1    1  24599999865  


Q ss_pred             cccHHHHHHHHHHhcC
Q 044498          263 MVSINEMAEIILSFEN  278 (366)
Q Consensus       263 ~~s~~el~~~i~~~~g  278 (366)
                      ++++.++.+.......
T Consensus       317 p~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  317 PVTWGDFIELALRYFE  332 (467)
T ss_pred             cccHHHHHHHHHHhcc
Confidence            8999999999888764

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.3e-15  Score=139.34  Aligned_cols=195  Identities=14%  Similarity=0.060  Sum_probs=135.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .++++|+||||+|+||.++++.|+++|++         |++++|+.......      ....+.++.+|++|.+++.+++
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~---------Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~  108 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGAT---------VVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALV  108 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            35588999999999999999999999999         99999875432111      1223568899999998887766


Q ss_pred             c-------CCCEEEEcccccCCccccc-----cCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ-----SNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~-----~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +       ++|++||+||.........     .+....+.+|+.+..++++++.    +.+..  ++|++||.+.++.. 
T Consensus       109 ~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~~-  185 (293)
T PRK05866        109 ADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDG--HIINVATWGVLSEA-  185 (293)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--EEEEECChhhcCCC-
Confidence            5       7899999999653211111     1224468889998777776654    55666  89999997554321 


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                   ....+.|+.+|++.+.+++.++.++   ++.+.+++++.+ ..+...    ..  .  ..+   ...
T Consensus       186 -------------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~----~~--~--~~~---~~~  241 (293)
T PRK05866        186 -------------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP----TK--A--YDG---LPA  241 (293)
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc----cc--c--ccC---CCC
Confidence                         1124579999999999988887765   788888876543 111110    00  0  001   123


Q ss_pred             eeHHHHHHHHHHHHhcC
Q 044498          235 TFIDECVEGVLRLIKSD  251 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~  251 (366)
                      +..+++|+.++..+...
T Consensus       242 ~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        242 LTADEAAEWMVTAARTR  258 (293)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            57899999999988864

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.1e-16  Score=137.52  Aligned_cols=210  Identities=13%  Similarity=0.079  Sum_probs=143.7

Q ss_pred             EEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc---CCC
Q 044498           27 SSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS---GVD   98 (366)
Q Consensus        27 lItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~---~~d   98 (366)
                      |||||+|+||++++++|+++|++         |++++|+.......     ...+++++.+|+++.+++.++++   .+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id   71 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGAR---------VTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFD   71 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence            69999999999999999999999         99999875432111     12346789999999999988875   479


Q ss_pred             EEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC
Q 044498           99 NMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ  175 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~  175 (366)
                      ++||++|........   ..+....+++|+.++.+++++....+..  ++|++||...+..               ..+.
T Consensus        72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g--~iv~~ss~~~~~~---------------~~~~  134 (230)
T PRK07041         72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGG--SLTFVSGFAAVRP---------------SASG  134 (230)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCe--EEEEECchhhcCC---------------CCcc
Confidence            999999975432111   2234556889999999999976665566  8999999766532               1235


Q ss_pred             CchHHHHHHHHHHHHHHHHHc-CCcEEEeCCCcH-HHHHHHHHhCCCCeEEe---cCCcceeeeeeHHHHHHHHHHHHhc
Q 044498          176 DAYGLEKLATEGLCKHYTKDF-EIECRLVGEKAP-AAFSRKAVTSTDNFEMW---GDGKQTRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~---~~~~~~~~~i~v~D~a~~~~~~l~~  250 (366)
                      ..|+.+|...+.+.+.++.++ ++++..+.+..+ ..+...... .....+.   ........+...+|+++++..++..
T Consensus       135 ~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  213 (230)
T PRK07041        135 VLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAG-DAREAMFAAAAERLPARRVGQPEDVANAILFLAAN  213 (230)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhc-cchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC
Confidence            679999999999999988775 466666655432 112111110 0000000   0000111245689999999999976


Q ss_pred             C--CCCcEEecCCCc
Q 044498          251 D--FREPLNIGSDEM  263 (366)
Q Consensus       251 ~--~~~~~~i~~~~~  263 (366)
                      .  .++.|++.+|++
T Consensus       214 ~~~~G~~~~v~gg~~  228 (230)
T PRK07041        214 GFTTGSTVLVDGGHA  228 (230)
T ss_pred             CCcCCcEEEeCCCee
Confidence            5  478899887764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.69  E-value=5.3e-16  Score=139.06  Aligned_cols=207  Identities=16%  Similarity=0.084  Sum_probs=143.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|.++|++         |++++|........      ....+.++.+|+++.+++.++++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~---------vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   80 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGAS---------VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            5689999999999999999999999999         99888765432111      11235788999999988776543


Q ss_pred             -------CCCEEEEcccccCCccc--cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF--IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                             ++|++||+||.......  ...+....+..|+.++.++++++..    .+..  ++|++||.....       
T Consensus        81 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~-------  151 (255)
T PRK06113         81 FALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG--VILTITSMAAEN-------  151 (255)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc--EEEEEecccccC-------
Confidence                   58999999997542111  1122334488999999999998863    3445  899999964321       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH----------HHHHHHHhCCCCeEEecCCc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA----------AFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~----------~~~~~~~~~~~~~~i~~~~~  229 (366)
                              +..+...|+.+|.+.+.+++.++.++   ++++.++.++.+.          .+...... .         .
T Consensus       152 --------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~-~---------~  213 (255)
T PRK06113        152 --------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQ-H---------T  213 (255)
T ss_pred             --------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHh-c---------C
Confidence                    22235679999999999999987754   6777777554331          11111111 1         1


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ....+...+|+++++..++...    .++++++.++...
T Consensus       214 ~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        214 PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccc
Confidence            1123568899999999998653    4778888877543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.4e-15  Score=134.15  Aligned_cols=213  Identities=11%  Similarity=-0.014  Sum_probs=138.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhh----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMT----   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~----   94 (366)
                      ++++|+||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++..++    
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGAR---------VAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALA   75 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99998875322111   1223578899999987765543    


Q ss_pred             ---cCCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecc-cccCCCCCCCCCcc
Q 044498           95 ---SGVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSA-CIYPEFKQLDTDVK  165 (366)
Q Consensus        95 ---~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~-~vyg~~~~~~~~~~  165 (366)
                         .++|+|||+||.......   ...+....+.+|+.++.++++++...  ...  ++|++||. +.|+.         
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~i~~~S~~~~~~~---------  144 (249)
T PRK06500         76 EAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPA--SIVLNGSINAHIGM---------  144 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC--EEEEEechHhccCC---------
Confidence               368999999997542111   12234556889999999999999752  223  67777773 33432         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEE----ecCCcceeeeeeH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEM----WGDGKQTRSLTFI  237 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i----~~~~~~~~~~i~v  237 (366)
                             .+.+.|+.+|...|.+++.++.++   ++++.++++..+ ..+....-........    ........-+...
T Consensus       145 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (249)
T PRK06500        145 -------PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTP  217 (249)
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCH
Confidence                   124679999999999998887764   788888876543 2222111000000000    0000011124578


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      +|+++++..++...    .+..+.+.+|
T Consensus       218 ~~va~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        218 EEIAKAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHHHHHHcCccccCccCCeEEECCC
Confidence            99999999988643    2444555444

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=7.8e-16  Score=137.87  Aligned_cols=214  Identities=13%  Similarity=0.035  Sum_probs=142.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .++++|||||+|.||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~---------vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAE---------IIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIE   78 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCE---------EEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999987543211      112235678899999988777653


Q ss_pred             -------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|+|||+||........   ..+....+++|+.++..+++++..    .+..  +||++||.....      
T Consensus        79 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~------  150 (254)
T PRK08085         79 HIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAG--KIINICSMQSEL------  150 (254)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEEccchhcc------
Confidence                   589999999965321111   123344688999998888877664    3445  899999963211      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCe-EEecCCcceeeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNF-EMWGDGKQTRSLTF  236 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~-~i~~~~~~~~~~i~  236 (366)
                               +..+...|+.+|.+.+.+++.++.++   ++++..++++.+. .+...... .... ...........+..
T Consensus       151 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~  220 (254)
T PRK08085        151 ---------GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRTPAARWGD  220 (254)
T ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcCCCCCCcC
Confidence                     12235679999999999999988765   7888888655431 11111100 0000 00001112234678


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+|++.++..++...    .+++..+.+|.
T Consensus       221 ~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        221 PQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            999999999988653    46667666554

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2e-15  Score=135.43  Aligned_cols=215  Identities=14%  Similarity=0.057  Sum_probs=141.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----------cccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----------EDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----------~~~~~v~~~~~D~~~~~~l~   91 (366)
                      +++++|||||+|+||.++++.|+++|++         |+++++.......          .....+.++.+|+++.+++.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~---------vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~   77 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAK---------AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVE   77 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCc---------EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHH
Confidence            4578999999999999999999999999         8887754321110          01224678899999998887


Q ss_pred             hhhc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcC--CCceeEEEEecccccCCCCC
Q 044498           92 RMTS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNG--VMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        92 ~~~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++++       ++|++||+||........   ..+....+.+|+.++..+++++...-  ..  ++++++|......   
T Consensus        78 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~iv~~~ss~~~~~---  152 (257)
T PRK12744         78 KLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG--KIVTLVTSLLGAF---  152 (257)
T ss_pred             HHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CEEEEecchhccc---
Confidence            7653       589999999975322111   22344568899999999999887541  23  5666533222111   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCe-----EEecCCcc
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNF-----EMWGDGKQ  230 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~-----~i~~~~~~  230 (366)
                                  ......|+.+|++.|.+.+.++.++   ++++..++++.+.. +...... ....     ........
T Consensus       153 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~  219 (257)
T PRK12744        153 ------------TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFS  219 (257)
T ss_pred             ------------CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhcccccccccccc
Confidence                        0124579999999999999998886   57888887665521 1111000 0000     00011111


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC---CCCcEEecCCCc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD---FREPLNIGSDEM  263 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~~~  263 (366)
                      ...+..++|++.++..++...   .++++++.+|..
T Consensus       220 ~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        220 KTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGYT  255 (257)
T ss_pred             cCCCCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence            124788999999999999753   367888877643

>PRK08643 acetoin reductase; Validated

Probab=99.69  E-value=2.1e-15  Score=135.25  Aligned_cols=214  Identities=14%  Similarity=0.056  Sum_probs=140.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++|||||+|+||.++++.|+++|++         |++++|+......      .....+.++.+|+++++.+.++++ 
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFK---------VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ   72 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999         9999987543211      112345788999999988776653 


Q ss_pred             ------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|++||+||.........   .+....+.+|+.++..+++++..    .+ ..  ++|++||...+..     
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~-----  145 (256)
T PRK08643         73 VVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGG--KIINATSQAGVVG-----  145 (256)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC--EEEEECccccccC-----
Confidence                  5899999998643211111   12244578899988777766654    22 24  7999998643211     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC-----CCCeEE----ecCC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS-----TDNFEM----WGDG  228 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~-----~~~~~i----~~~~  228 (366)
                                ......|+.+|...+.+.+.++.++   ++++..+++..+ ..+.......     +.+...    +-..
T Consensus       146 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (256)
T PRK08643        146 ----------NPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD  215 (256)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc
Confidence                      1124579999999999998888754   688888876644 2222222110     000000    0000


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .....+...+|++.++..++...    .++++.+.+|.
T Consensus       216 ~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        216 ITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            11123567899999999998643    46777777664

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.69  E-value=7.6e-16  Score=138.29  Aligned_cols=214  Identities=14%  Similarity=0.097  Sum_probs=142.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-c----ccccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-M----MEDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~----~~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++||||||+|.||.+++++|++.|++         |++++|+.... .    ......+.++.+|+++.+++.++++ 
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   84 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGAD---------IIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKE   84 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            5688999999999999999999999999         99998873211 1    1112346789999999988777664 


Q ss_pred             ------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            .+|++||+||........   ..+.+..+..|+.+...+++++.    +.+..  ++|++||...+...     
T Consensus        85 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~-----  157 (258)
T PRK06935         85 ALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSG--KIINIASMLSFQGG-----  157 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCe--EEEEECCHHhccCC-----
Confidence                  689999999975321111   12334457889998777766554    44555  89999997654321     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCe-EEecCCcceeeeeeH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNF-EMWGDGKQTRSLTFI  237 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~-~i~~~~~~~~~~i~v  237 (366)
                                .....|+.+|.+.+.+.+.+++++   ++++..+.++.+. .+........... .+. .......+...
T Consensus       158 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  226 (258)
T PRK06935        158 ----------KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL-KRIPAGRWGEP  226 (258)
T ss_pred             ----------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHH-hcCCCCCCCCH
Confidence                      123479999999999999998865   6888777655432 1111100000000 000 00112346778


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|++..+..++...    .++++.+.+|.
T Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        227 DDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            99999999988643    46777777663

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.6e-16  Score=137.65  Aligned_cols=216  Identities=14%  Similarity=0.055  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|.||++++++|.++|++         |++++|+......       .....+.++.+|+++.+++.+++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~---------v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   77 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGAD---------VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAV   77 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            5678999999999999999999999999         9999886542211       11224578899999998877765


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||........   ..+....+.+|+.++..+++++.    +.+..  ++|++||..-+....  
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~~~--  153 (254)
T PRK06114         78 ARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGG--SIVNIASMSGIIVNR--  153 (254)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCc--EEEEECchhhcCCCC--
Confidence            3       479999999975422111   12234457899999877766653    34455  899999965332111  


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                 ..+...|+.+|++.+.+.+.++.++   ++++.++.++.+. .+.... .................+..
T Consensus       154 -----------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~  221 (254)
T PRK06114        154 -----------GLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAK  221 (254)
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcC
Confidence                       1124579999999999999887754   7888888655431 111000 00000000000011123567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+|++.++..++...    .++++.+.+|.
T Consensus       222 ~~dva~~~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        222 VDEMVGPAVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence            899999999998653    46777777653

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.69  E-value=7.5e-16  Score=138.76  Aligned_cols=212  Identities=13%  Similarity=0.051  Sum_probs=141.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||.+++++|+++|++         |++++|+.......      ...++.++.+|+++.+++.++++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~---------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   79 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGAD---------VLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAG   79 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            5678999999999999999999999999         99999875432111      12346788999999998876553


Q ss_pred             -------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH-----cCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM-----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~-----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|+|||+||........   ..+....+.+|+.++.++++++..     .+..  +||++||..-..     
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g--~iv~~sS~~~~~-----  152 (263)
T PRK07814         80 QAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGG--SVINISSTMGRL-----  152 (263)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCe--EEEEEccccccC-----
Confidence                   689999999964321111   123455688999999999999874     3455  899999953211     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHHHHhCCCCe--EEecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRKAVTSTDNF--EMWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~~~~~~~~~--~i~~~~~~~~~~i  235 (366)
                                +..+...|+.+|...+.+++.++.++.  +++..+.+..+ ..+...... ...+  .+... .....+.
T Consensus       153 ----------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~-~~~~~~~  220 (263)
T PRK07814        153 ----------AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA-NDELRAPMEKA-TPLRRLG  220 (263)
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC-CHHHHHHHHhc-CCCCCCc
Confidence                      123456799999999999999888763  45555554433 111111100 0000  00000 1112246


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+|++++++.++...    .++.+.+.++
T Consensus       221 ~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        221 DPEDIAAAAVYLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            7899999999998652    4566666554

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=2.3e-16  Score=141.03  Aligned_cols=204  Identities=13%  Similarity=0.010  Sum_probs=139.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ..+++|||||+|+||+++++.|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~---------vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAK---------LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFA   74 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999987643211      112245788999999887766543


Q ss_pred             -------CCCEEEEcccccCCcc------------ccccCcchhhhhhHHHHHHHHHHHH----Hc-CCCceeEEEEecc
Q 044498           96 -------GVDNMSNLAADMGGMG------------FIQSNHSVIMYKNTTISFDMLEAAR----MN-GVMSLTFFFVSSA  151 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~------------~~~~~~~~~~~~nv~~~~~ll~a~~----~~-~~~~~r~I~~SS~  151 (366)
                             .+|+|||+||......            ....+....+..|+.++..+.+++.    +. ...  ++|++||.
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~--~iv~~ss~  152 (253)
T PRK08217         75 QIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKG--VIINISSI  152 (253)
T ss_pred             HHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCe--EEEEEccc
Confidence                   4799999999643210            0111223457789988876665443    22 223  69999997


Q ss_pred             cccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH---------HHHHHHHhCC
Q 044498          152 CIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA---------AFSRKAVTST  219 (366)
Q Consensus       152 ~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~---------~~~~~~~~~~  219 (366)
                      ..|+..                +...|+.+|.+.+.+++.++.+   .++++..+++..+.         .+......  
T Consensus       153 ~~~~~~----------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~--  214 (253)
T PRK08217        153 ARAGNM----------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEK--  214 (253)
T ss_pred             cccCCC----------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHh--
Confidence            665432                2456999999999999888765   47888888665441         11111111  


Q ss_pred             CCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCC
Q 044498          220 DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGSDE  262 (366)
Q Consensus       220 ~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~  262 (366)
                              ......+.+++|+++++..++...  .++++++.++.
T Consensus       215 --------~~~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        215 --------MIPVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             --------cCCcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence                    112234668999999999998653  57888888764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.7e-15  Score=134.71  Aligned_cols=215  Identities=14%  Similarity=0.081  Sum_probs=143.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++++|||||+|.||++++++|+++|++         |++++|+......     .....+.++.+|+++.+++.++++ 
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAI---------PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQ   76 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCc---------EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            5578999999999999999999999999         9999887653210     012246889999999998877664 


Q ss_pred             ------CCCEEEEcccccCCcccc--ccCcchhhhhhHHHHHHHHHHHHH---cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ------GVDNMSNLAADMGGMGFI--QSNHSVIMYKNTTISFDMLEAARM---NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~---~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                            ++|+|||+||........  ..+....+..|+.+..++.+++.+   .+..  +||++||...+..        
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~iv~~ss~~~~~~--------  146 (258)
T PRK08628         77 TVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRG--AIVNISSKTALTG--------  146 (258)
T ss_pred             HHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCc--EEEEECCHHhccC--------
Confidence                  589999999964321111  122344578899998888887754   2335  8999999654321        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCe-----EEecCCcceeeee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNF-----EMWGDGKQTRSLT  235 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~-----~i~~~~~~~~~~i  235 (366)
                             ..+...|+.+|...+.+++.++.+   .++++..++++.+ ..+....+......     .+.........++
T Consensus       147 -------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (258)
T PRK08628        147 -------QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMT  219 (258)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCC
Confidence                   123567999999999999998765   4788888876543 22222211100000     0000000002367


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+|+++++..++...    .++.+.+.++.
T Consensus       220 ~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        220 TAEEIADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             CHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence            8999999999998653    45667776553

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=136.73  Aligned_cols=216  Identities=10%  Similarity=-0.015  Sum_probs=144.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++++||||+|+||.+++++|+++|++         |++++|+.......        ....+.++.+|+++.+++.++
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~---------vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAA---------VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAA   76 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHH
Confidence            4578999999999999999999999999         99999875432111        122467899999999887776


Q ss_pred             hc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       .+|++||+||........   ..+....+++|+.++..+++++..    .+..  ++|++||...+..   
T Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  151 (260)
T PRK07063         77 VAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRG--SIVNIASTHAFKI---  151 (260)
T ss_pred             HHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCe--EEEEECChhhccC---
Confidence            54       689999999964321111   123344578899998888887653    3445  8999999643321   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-e---EEecCCcce
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-F---EMWGDGKQT  231 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~---~i~~~~~~~  231 (366)
                                  ..+...|+.+|++.+.+.+.++.++   ++++..+.++.+ ..+.......... .   .........
T Consensus       152 ------------~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK07063        152 ------------IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM  219 (260)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC
Confidence                        1234579999999999999988775   677877766544 2222111110000 0   000000111


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ..+...+|++.++..++...    .++.+.+.+|..
T Consensus       220 ~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        220 KRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             CCCCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence            23567899999999998653    467777776643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.68  E-value=8.4e-16  Score=155.19  Aligned_cols=233  Identities=18%  Similarity=0.098  Sum_probs=150.1

Q ss_pred             cCcccccccccCCC-CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccc
Q 044498            5 YGECTYDKLERESH-WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMF   75 (366)
Q Consensus         5 ~~~~~~~~~~~~~~-~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~   75 (366)
                      ||+.+..++.+... ....+++||||||+|+||++++++|+++|++         |++++|+.......        ...
T Consensus       395 yw~~e~~kl~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~---------Vvi~~r~~~~~~~~~~~l~~~~~~~  465 (676)
T TIGR02632       395 YWPLEEAKLRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAH---------VVLADLNLEAAEAVAAEINGQFGAG  465 (676)
T ss_pred             hhhhhHHhhccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHHHHhhcCCC
Confidence            77777777754432 2235689999999999999999999999999         99999875432110        111


Q ss_pred             cceEEEccCCChhHHHhhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHH----HHcC-C
Q 044498           76 CHEFHLVDLRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAA----RMNG-V  140 (366)
Q Consensus        76 ~v~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~----~~~~-~  140 (366)
                      .+..+.+|+++.+++.++++       ++|+|||+||..........+   ....+++|+.+...+.+.+    +..+ .
T Consensus       466 ~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~  545 (676)
T TIGR02632       466 RAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG  545 (676)
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            34678999999998887764       689999999975422121212   2344677888766655443    3333 2


Q ss_pred             CceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH---HHHH-
Q 044498          141 MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA---AFSR-  213 (366)
Q Consensus       141 ~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~---~~~~-  213 (366)
                      .  +||++||...+..               ......|+.+|.+.+.+++.++.++   ++++..+.++.+.   .+.. 
T Consensus       546 g--~IV~iSS~~a~~~---------------~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~  608 (676)
T TIGR02632       546 G--NIVFIASKNAVYA---------------GKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG  608 (676)
T ss_pred             C--EEEEEeChhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc
Confidence            3  7999999543211               1224679999999999999988874   6777766554321   1100 


Q ss_pred             -----HHHhCCCCe----EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          214 -----KAVTSTDNF----EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       214 -----~~~~~~~~~----~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                           .....+...    ..+........+++.+|+|+++..++...    .++++++.+|..
T Consensus       609 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       609 EWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             cchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence                 000000000    00111222345688999999999988642    367888887753

>PRK12742 oxidoreductase; Provisional

Probab=99.68  E-value=1e-15  Score=135.63  Aligned_cols=212  Identities=13%  Similarity=0.050  Sum_probs=138.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhc---C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTS---G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~---~   96 (366)
                      ++++||||||+|.||++++++|+++|++         |+++.+........  ...++.++.+|+++.+++.++++   +
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~---------v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN---------VRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGA   75 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCC
Confidence            4578999999999999999999999999         88776543221111  12245788899999888777654   4


Q ss_pred             CCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           97 VDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      +|++||+||........   ..+....+.+|+.++..++..+...  ...  ++|++||....  .  .          +
T Consensus        76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g--~iv~isS~~~~--~--~----------~  139 (237)
T PRK12742         76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGG--RIIIIGSVNGD--R--M----------P  139 (237)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCC--eEEEEeccccc--c--C----------C
Confidence            89999999965321111   2234556889999998887666553  234  89999995321  0  0          2


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCe-EEecCCcceeeeeeHHHHHHHHHHH
Q 044498          172 AEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNF-EMWGDGKQTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       172 ~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~i~v~D~a~~~~~~  247 (366)
                      ..+...|+.+|++.+.+++.++.++   ++++..++++.+..-+.   ....+. ...........+...+|+++++..+
T Consensus       140 ~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~---~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l  216 (237)
T PRK12742        140 VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDAN---PANGPMKDMMHSFMAIKRHGRPEEVAGMVAWL  216 (237)
T ss_pred             CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcc---ccccHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            2346689999999999998887764   68888886654421100   000000 0000000112356789999999999


Q ss_pred             HhcC----CCCcEEecCC
Q 044498          248 IKSD----FREPLNIGSD  261 (366)
Q Consensus       248 l~~~----~~~~~~i~~~  261 (366)
                      +...    .+..+.+.+|
T Consensus       217 ~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        217 AGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             cCcccCcccCCEEEeCCC
Confidence            8653    4566666554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.68  E-value=4.7e-16  Score=137.75  Aligned_cols=208  Identities=14%  Similarity=0.064  Sum_probs=138.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhhc---
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      |||||++|+||++++++|+++|++         |++++|......       ......+.++.+|+++.+++.++++   
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   71 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAK---------VIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIE   71 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            689999999999999999999999         999988652211       1111235789999999998877654   


Q ss_pred             ----CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecc-cccCCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSA-CIYPEFKQLDTD  163 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~-~vyg~~~~~~~~  163 (366)
                          .+|+|||++|......   .........+..|+.++.++++++..    .+.+  +||++||. ++||..      
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~v~~sS~~~~~g~~------  143 (239)
T TIGR01830        72 EELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSG--RIINISSVVGLMGNA------  143 (239)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe--EEEEECCccccCCCC------
Confidence                4799999999753211   11223455688999999999998865    3455  89999995 344421      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                                +...|+.+|.+.+.+.+.++.+   .++.+.++++..+..-+...........+ ........+.+++|+
T Consensus       144 ----------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  212 (239)
T TIGR01830       144 ----------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKI-LSQIPLGRFGTPEEV  212 (239)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHH-HhcCCcCCCcCHHHH
Confidence                      2356999999999888887665   37888888654331111000000000000 000011235679999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCC
Q 044498          241 VEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ++++..++...    .+++||+.++
T Consensus       213 a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       213 ANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHhCcccCCcCCCEEEeCCC
Confidence            99999888442    4678998755

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9.4e-16  Score=137.85  Aligned_cols=199  Identities=17%  Similarity=0.061  Sum_probs=134.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc----ccccceEEEccCCChhHHHhhhc---
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME----DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~----~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      |+++|||||||+||++++++|+++|++         |++++|+.......    ....+.++.+|+++.+++.++++   
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   71 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWR---------VGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFA   71 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999         99999876532211    12346899999999988776543   


Q ss_pred             -----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEeccc-ccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSAC-IYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~-vyg~~~~~~~  162 (366)
                           ++|+|||+||.........   .+.+..+.+|+.++.++++++.+    .+..  ++|++||.. ++|..     
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~~~-----  144 (260)
T PRK08267         72 AATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGA--RVINTSSASAIYGQP-----  144 (260)
T ss_pred             HHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC--EEEEeCchhhCcCCC-----
Confidence                 4799999999764321111   23455688999999999888753    3455  899999963 33321     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                                 ....|+.+|...+.+.+.++.+.   ++++..+++..+..-+..-.  ...... .......-.+..+|
T Consensus       145 -----------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~-~~~~~~~~~~~~~~  210 (260)
T PRK08267        145 -----------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGT--SNEVDA-GSTKRLGVRLTPED  210 (260)
T ss_pred             -----------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccc--cchhhh-hhHhhccCCCCHHH
Confidence                       13469999999999998887653   68888887665421111000  000000 00000111356799


Q ss_pred             HHHHHHHHHhcC
Q 044498          240 CVEGVLRLIKSD  251 (366)
Q Consensus       240 ~a~~~~~~l~~~  251 (366)
                      ++++++.+++..
T Consensus       211 va~~~~~~~~~~  222 (260)
T PRK08267        211 VAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHhCC
Confidence            999999998654

>PRK06196 oxidoreductase; Provisional

Probab=99.68  E-value=1.4e-15  Score=140.74  Aligned_cols=216  Identities=13%  Similarity=0.017  Sum_probs=136.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhh-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMT-----   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~-----   94 (366)
                      ++++|+||||+|+||.+++++|+++|++         |++++|+.......  ....+.++.+|++|.+++.+++     
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~---------Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAH---------VIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999         99999876532211  1123689999999998887765     


Q ss_pred             --cCCCEEEEcccccCCcc-ccccCcchhhhhhHHHHHHHHH----HHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           95 --SGVDNMSNLAADMGGMG-FIQSNHSVIMYKNTTISFDMLE----AARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        95 --~~~d~vi~~a~~~~~~~-~~~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                        .++|++||+||....+. ......+..+.+|+.++..+.+    .+++.+..  ++|++||...........   ...
T Consensus        96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~--~iV~vSS~~~~~~~~~~~---~~~  170 (315)
T PRK06196         96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGA--RVVALSSAGHRRSPIRWD---DPH  170 (315)
T ss_pred             cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--eEEEECCHHhccCCCCcc---ccC
Confidence              36899999999754221 1122335568899998655555    44455555  899999964322111000   000


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCe--EEec-CCcce-eeeeeHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNF--EMWG-DGKQT-RSLTFIDEC  240 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~--~i~~-~~~~~-~~~i~v~D~  240 (366)
                      ...+..+...|+.+|++.+.+.+.++.++   +++++.++++.+..-+..........  .... ..... ..+...+|.
T Consensus       171 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (315)
T PRK06196        171 FTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQG  250 (315)
T ss_pred             ccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHH
Confidence            01134456789999999999988887654   78888887765421111000000000  0000 00000 024568999


Q ss_pred             HHHHHHHHhcC
Q 044498          241 VEGVLRLIKSD  251 (366)
Q Consensus       241 a~~~~~~l~~~  251 (366)
                      |..++.++..+
T Consensus       251 a~~~~~l~~~~  261 (315)
T PRK06196        251 AATQVWAATSP  261 (315)
T ss_pred             HHHHHHHhcCC
Confidence            99999988643

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.4e-15  Score=135.49  Aligned_cols=218  Identities=11%  Similarity=0.004  Sum_probs=143.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|.||++++++|+++|++         |++++|+.......       ...++.++.+|++|++++.+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~   77 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGAD---------VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTV   77 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence            5678999999999999999999999999         99999875432110       1234678999999998887766


Q ss_pred             c------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHH----HHHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           95 S------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDML----EAARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        95 ~------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll----~a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      +      ++|++||+||.........   .+....+++|+.+...+.    ..+++.+..  ++|++||...+..     
T Consensus        78 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g--~Ii~isS~~~~~~-----  150 (263)
T PRK08339         78 KELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFG--RIIYSTSVAIKEP-----  150 (263)
T ss_pred             HHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEEcCccccCC-----
Confidence            4      5899999999653221222   223445778877755554    444455555  8999999754321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC-----CCC----eEEecCC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS-----TDN----FEMWGDG  228 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~-----~~~----~~i~~~~  228 (366)
                                ......|+.+|...+.+.+.++.++   |+++..+.++.+ ..+.......     +..    .......
T Consensus       151 ----------~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
T PRK08339        151 ----------IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP  220 (263)
T ss_pred             ----------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc
Confidence                      1124569999999999999988875   677777755543 2232221100     000    0000011


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      .....+...+|++.++..++...    .++++.+.+|...|
T Consensus       221 ~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        221 IPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             CCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            11223567899999999998642    46778887766544

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.4e-15  Score=133.77  Aligned_cols=192  Identities=14%  Similarity=0.036  Sum_probs=134.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ||+|+||||+|+||.+++++|+++|++         |++++|+.......       ...++.++.+|+++.+++.++++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   71 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGAR---------LYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLD   71 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCE---------EEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHH
Confidence            578999999999999999999999999         99999876532111       12356899999999988877654


Q ss_pred             ----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          .+|++||++|..........+.   ...+..|+.++.++++++..    .+..  +||++||..-...        
T Consensus        72 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~--------  141 (243)
T PRK07102         72 SLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSG--TIVGISSVAGDRG--------  141 (243)
T ss_pred             HHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCC--EEEEEecccccCC--------
Confidence                4799999999654322222222   34578999999988887764    3556  8999998632111        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                             ......|+.+|...+.+.+.++.+   .++++..+++..+..-+.   . ...  .++     .-...++|++
T Consensus       142 -------~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~---~-~~~--~~~-----~~~~~~~~~a  203 (243)
T PRK07102        142 -------RASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT---A-GLK--LPG-----PLTAQPEEVA  203 (243)
T ss_pred             -------CCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh---h-ccC--CCc-----cccCCHHHHH
Confidence                   112346999999999998888654   378888887665422211   1 111  000     1245689999


Q ss_pred             HHHHHHHhcC
Q 044498          242 EGVLRLIKSD  251 (366)
Q Consensus       242 ~~~~~~l~~~  251 (366)
                      +.+..++.++
T Consensus       204 ~~i~~~~~~~  213 (243)
T PRK07102        204 KDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHhCC
Confidence            9999998865

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.67  E-value=1.5e-15  Score=129.85  Aligned_cols=204  Identities=12%  Similarity=-0.011  Sum_probs=142.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-cc---ccceEEEccCCChhHHHhhh---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DM---FCHEFHLVDLRVMDNCLRMT---   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~---~~v~~~~~D~~~~~~l~~~~---   94 (366)
                      ..+.++|||||+.||.++++.|.+.|++         |++..|+.++.... ..   ..+.....|++|.+++.+++   
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~---------vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAK---------VVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe---------EEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHH
Confidence            3467999999999999999999999999         99999987743222 11   23678899999998866554   


Q ss_pred             ----cCCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCC
Q 044498           95 ----SGVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        95 ----~~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                          .++|++||+||..-.......+   ++..+++|+.|..++.++...    .+..  ++|.+||.+-   ..     
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G--~IiN~~SiAG---~~-----  145 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSG--HIINLGSIAG---RY-----  145 (246)
T ss_pred             HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCc--eEEEeccccc---cc-----
Confidence                3699999999987543333333   345589999998887777654    4444  8999999631   10     


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                             +....+.|+.+|+....+.+..+.+.   +++++.+-|+.+.. .+...-.++..-.. .........+..+|
T Consensus       146 -------~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~-~~~y~~~~~l~p~d  217 (246)
T COG4221         146 -------PYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERA-DKVYKGGTALTPED  217 (246)
T ss_pred             -------cCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhH-HHHhccCCCCCHHH
Confidence                   23336679999999999988887775   78888886665522 11111111100000 01011234688999


Q ss_pred             HHHHHHHHHhcCC
Q 044498          240 CVEGVLRLIKSDF  252 (366)
Q Consensus       240 ~a~~~~~~l~~~~  252 (366)
                      +|+++.++++.|.
T Consensus       218 IA~~V~~~~~~P~  230 (246)
T COG4221         218 IAEAVLFAATQPQ  230 (246)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999999873

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.6e-15  Score=135.09  Aligned_cols=214  Identities=14%  Similarity=0.024  Sum_probs=143.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++++||||+|.||++++++|+++|++         |++++|+......   .....+.++.+|+++.+++.++++   
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGAR---------VAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVV   75 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHH
Confidence            4579999999999999999999999999         9999987643211   112246789999999988877653   


Q ss_pred             ----CCCEEEEcccccCCcc--ccccCcchhhhhhHHHHHHHHHHHHH---cCCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 ----GVDNMSNLAADMGGMG--FIQSNHSVIMYKNTTISFDMLEAARM---NGVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~---~~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                          .+|++||+||......  ....+....+.+|+.++..+++++..   .+..  ++|++||...+-.          
T Consensus        76 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g--~ii~isS~~~~~~----------  143 (261)
T PRK08265         76 ARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGG--AIVNFTSISAKFA----------  143 (261)
T ss_pred             HHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCc--EEEEECchhhccC----------
Confidence                5899999999643211  11223345578899998888887654   2334  8999999643211          


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe---EEecCCcceeeeeeHHH
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF---EMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~---~i~~~~~~~~~~i~v~D  239 (366)
                           ......|+.+|...+.+.+.++.++   ++++..++++.+ ..+...... +...   .+.........+...+|
T Consensus       144 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~-~~~~~~~~~~~~~~p~~r~~~p~d  217 (261)
T PRK08265        144 -----QTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG-GDRAKADRVAAPFHLLGRVGDPEE  217 (261)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc-cchhHHHHhhcccCCCCCccCHHH
Confidence                 1124569999999999999888765   688888876643 222222211 1100   00000011223467899


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|+++..++...    .++.+.+.+|.
T Consensus       218 va~~~~~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        218 VAQVVAFLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHHHHHHHcCccccCccCcEEEECCCe
Confidence            999999998653    46777777663

>PRK12743 oxidoreductase; Provisional

Probab=99.67  E-value=1.2e-15  Score=136.91  Aligned_cols=213  Identities=17%  Similarity=0.038  Sum_probs=139.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++||||||+|+||++++++|+++|++         |+++.+.......       .....+.++.+|+++.+++.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   72 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFD---------IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALD   72 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            568999999999999999999999999         9887654332111       112246889999999988766553


Q ss_pred             -------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .+|++||++|.........   .+....+.+|+.+...+++++...    + ..  ++|++||.....     
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g--~ii~isS~~~~~-----  145 (256)
T PRK12743         73 KLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGG--RIINITSVHEHT-----  145 (256)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe--EEEEEeeccccC-----
Confidence                   5899999999754211111   223455889999999999887653    1 24  899999953211     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                +..+...|+.+|...+.+++.++.++   ++++..++++.+..-+..... ...............+...
T Consensus       146 ----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~  214 (256)
T PRK12743        146 ----------PLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD-SDVKPDSRPGIPLGRPGDT  214 (256)
T ss_pred             ----------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC-hHHHHHHHhcCCCCCCCCH
Confidence                      23346689999999999988887754   688887765543211000000 0000000000011124578


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|++.++..++...    .+..+.+.++.
T Consensus       215 ~dva~~~~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        215 HEIASLVAWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            99999999888643    46777777664

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.1e-15  Score=136.91  Aligned_cols=215  Identities=15%  Similarity=0.046  Sum_probs=143.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++|+||||+|+||.+++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   76 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAK---------VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVE   76 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            4579999999999999999999999999         9999987643211      112246889999999988777654


Q ss_pred             -------CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .+|+|||+||......    ....+....+.+|+.+...+++++    .+.+..  ++|++||...+...   
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~ii~~sS~~~~~~~---  151 (253)
T PRK06172         77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGG--AIVNTASVAGLGAA---  151 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEECchhhccCC---
Confidence                   5799999999643211    112233456789999887666544    344555  89999997655432   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~i  235 (366)
                                  .+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+........... ...........+.
T Consensus       152 ------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (253)
T PRK06172        152 ------------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIG  219 (253)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCcc
Confidence                        234579999999999999988876   577777755543 22222221100000 0000011112356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+|+++.+.+++...    .++.+.+.+|.
T Consensus       220 ~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        220 KVEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            7999999999998653    56777877664

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.2e-15  Score=139.15  Aligned_cols=207  Identities=14%  Similarity=0.049  Sum_probs=138.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .+++|+||||+|.||.+++++|.++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~---------Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~   77 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAK---------VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAAD   77 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999987543211      112245788999999998877653


Q ss_pred             -------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHH----HHHHHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFD----MLEAARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~----ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|++||+||..........+   ....+++|+.+..+    ++..+++.+..  +||++||...|...    
T Consensus        78 ~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g--~iV~isS~~~~~~~----  151 (334)
T PRK07109         78 RAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG--AIIQVGSALAYRSI----  151 (334)
T ss_pred             HHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEeCChhhccCC----
Confidence                   689999999964321111222   23446777666554    55555555556  89999998765422    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                 .....|+.+|...+.+.+.++.++     ++.++++.+..+ ..+.........     ........+.
T Consensus       152 -----------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~  215 (334)
T PRK07109        152 -----------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP-----VEPQPVPPIY  215 (334)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc-----ccccCCCCCC
Confidence                       124579999999999888876653     477778866544 222222111000     0011122356


Q ss_pred             eHHHHHHHHHHHHhcCCCCcEEecC
Q 044498          236 FIDECVEGVLRLIKSDFREPLNIGS  260 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~~~~~~~i~~  260 (366)
                      ..+|+|++++.++.++ .+.+.++.
T Consensus       216 ~pe~vA~~i~~~~~~~-~~~~~vg~  239 (334)
T PRK07109        216 QPEVVADAILYAAEHP-RRELWVGG  239 (334)
T ss_pred             CHHHHHHHHHHHHhCC-CcEEEeCc
Confidence            7999999999999876 34455553

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=7.5e-15  Score=131.66  Aligned_cols=209  Identities=13%  Similarity=0.027  Sum_probs=139.8

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc-----------c------cccccccceEEEc
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE-----------H------MMEDMFCHEFHLV   82 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-----------~------~~~~~~~v~~~~~   82 (366)
                      ++++||||||||  .||.+++++|.++|++         |++++|++.+           .      .......+.++.+
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~---------vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGID---------IFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEI   74 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCc---------EEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEEC
Confidence            457899999996  6999999999999999         9999887211           0      0001124688999


Q ss_pred             cCCChhHHHhhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEE
Q 044498           83 DLRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFV  148 (366)
Q Consensus        83 D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~  148 (366)
                      |+++.+++..+++       .+|+|||+||.........   .+....+.+|+.++..+++++...    +..  ++|++
T Consensus        75 D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~  152 (256)
T PRK12748         75 DLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGG--RIINL  152 (256)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCe--EEEEE
Confidence            9999887766543       5899999999753221222   223445889999999999888643    344  89999


Q ss_pred             ecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEE
Q 044498          149 SSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEM  224 (366)
Q Consensus       149 SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i  224 (366)
                      ||...++..               .+...|+.+|.+.+.+++.++.++   +++++.++++.+. .+...... ......
T Consensus       153 ss~~~~~~~---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-~~~~~~  216 (256)
T PRK12748        153 TSGQSLGPM---------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-HHLVPK  216 (256)
T ss_pred             CCccccCCC---------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-Hhhhcc
Confidence            997654321               234579999999999988887764   7888888665431 11111010 000000


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                          .....+...+|+++++..++...    .++++++.++
T Consensus       217 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        217 ----FPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             ----CCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence                00112345799999999888652    3677888665

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.67  E-value=6.5e-16  Score=137.81  Aligned_cols=213  Identities=12%  Similarity=-0.026  Sum_probs=133.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      |++||||||+|+||+++++.|+++|++         |+++.+.......       .....+.++.+|+++.+++.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   72 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWS---------VGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFD   72 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHH
Confidence            578999999999999999999999998         8766533221110       112246789999999987766543


Q ss_pred             -------CCCEEEEcccccCCccc----cccCcchhhhhhHHHHHHHHHHHHHc-CCC----ceeEEEEecccc-cCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF----IQSNHSVIMYKNTTISFDMLEAARMN-GVM----SLTFFFVSSACI-YPEFK  158 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~----~~r~I~~SS~~v-yg~~~  158 (366)
                             .+|++||+||.......    ...+....+.+|+.++..+++++.+. ..+    ..+||++||... ++.. 
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-  151 (248)
T PRK06947         73 AVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP-  151 (248)
T ss_pred             HHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-
Confidence                   68999999996532111    11122345889999988887544332 111    015999998643 3321 


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCC--eEEecCCcceee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDN--FEMWGDGKQTRS  233 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~  233 (366)
                                    .+...|+.+|...+.+.+.++.++   ++++.+++++.+..-+... . +.+  ....+.......
T Consensus       152 --------------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~  215 (248)
T PRK06947        152 --------------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS-G-GQPGRAARLGAQTPLGR  215 (248)
T ss_pred             --------------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc-c-CCHHHHHHHhhcCCCCC
Confidence                          112369999999999998887765   7889888776542111000 0 000  000000000111


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ...++|+++.++.++..+    .++.+.+.++
T Consensus       216 ~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        216 AGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            356899999999988764    3555665543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.2e-15  Score=132.77  Aligned_cols=196  Identities=13%  Similarity=-0.013  Sum_probs=137.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcC----
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSG----   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~----   96 (366)
                      |++++||||+|+||++++++|+++|++         |++++|+.......  ....+.++.+|+++.+++.+++++    
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   71 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQ---------VIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFI   71 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCE---------EEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccC
Confidence            468999999999999999999999999         99999876432211  123468899999999998887753    


Q ss_pred             CCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEeccc-ccCCCCCCCCCcccccCC
Q 044498           97 VDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSAC-IYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~-vyg~~~~~~~~~~e~~~~  170 (366)
                      +|.+||+||..........+   ....+.+|+.++.++++++...  +..  ++|++||.. .++               
T Consensus        72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~iv~isS~~~~~~---------------  134 (240)
T PRK06101         72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGH--RVVIVGSIASELA---------------  134 (240)
T ss_pred             CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--eEEEEechhhccC---------------
Confidence            68999999854321111122   2346889999999999998863  234  799998853 221               


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHH---HcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTK---DFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~---~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~  247 (366)
                       ......|+.+|...+.+.+.++.   ..+++++.++++.+..-+   .. ....       .....+..+|+++.+...
T Consensus       135 -~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~---~~-~~~~-------~~~~~~~~~~~a~~i~~~  202 (240)
T PRK06101        135 -LPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL---TD-KNTF-------AMPMIITVEQASQEIRAQ  202 (240)
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC---cC-CCCC-------CCCcccCHHHHHHHHHHH
Confidence             12245799999999999888774   348888888876542110   00 0000       001146789999999999


Q ss_pred             HhcCCCCcE
Q 044498          248 IKSDFREPL  256 (366)
Q Consensus       248 l~~~~~~~~  256 (366)
                      ++.....+|
T Consensus       203 i~~~~~~~~  211 (240)
T PRK06101        203 LARGKSHIY  211 (240)
T ss_pred             HhcCCCEEE
Confidence            987644444

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=2e-15  Score=133.49  Aligned_cols=210  Identities=15%  Similarity=0.070  Sum_probs=139.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh-hHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM-DNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~-~~l~~~~~~~d~v  100 (366)
                      ++++++||||+|+||++++++|.++|++         |++++|......   ...+.++.+|++++ +.+.+.+..+|++
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~---------v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~l   71 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQ---------VYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDIL   71 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCE---------EEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence            4578999999999999999999999999         999988754322   22457889999987 4444445679999


Q ss_pred             EEcccccCCc----cccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498          101 SNLAADMGGM----GFIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus       101 i~~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                      ||+||.....    .....+....+.+|+.++.++++++..    .+..  +||++||...+...               
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~---------------  134 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG--IIINMCSIASFVAG---------------  134 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEcChhhccCC---------------
Confidence            9999964211    111223345688999999988888754    3445  89999996543211               


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHH-HHHhCCCCe-EEecCCcceeeeeeHHHHHHHHHHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSR-KAVTSTDNF-EMWGDGKQTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~-~~~~~~~~~-~i~~~~~~~~~~i~v~D~a~~~~~~  247 (366)
                      .....|+.+|...+.+.+.++.++   ++++.++++..+..-+. .... .... ...........+...+|+|++++.+
T Consensus       135 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  213 (235)
T PRK06550        135 GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARETPIKRWAEPEEVAELTLFL  213 (235)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccCCcCCCCCHHHHHHHHHHH
Confidence            124569999999999998888765   78888886654311000 0000 0000 0000011123467789999999999


Q ss_pred             HhcC----CCCcEEecCC
Q 044498          248 IKSD----FREPLNIGSD  261 (366)
Q Consensus       248 l~~~----~~~~~~i~~~  261 (366)
                      +...    .++++.+.+|
T Consensus       214 ~s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        214 ASGKADYMQGTIVPIDGG  231 (235)
T ss_pred             cChhhccCCCcEEEECCc
Confidence            8543    4566777655

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.67  E-value=3.6e-15  Score=131.10  Aligned_cols=200  Identities=13%  Similarity=0.053  Sum_probs=142.5

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .++++++|||||+.||..++++|.++|++         |+.+.|+..+....       ....+.++.+|+++++++.++
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~---------liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l   74 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYN---------LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERL   74 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence            36789999999999999999999999999         99999987743211       223467999999999988876


Q ss_pred             hc-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      .+       .+|++|||||......+...+.   ...+.+|+.+...|-.++    .+.+..  ++|.++|.+-|-.   
T Consensus        75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G--~IiNI~S~ag~~p---  149 (265)
T COG0300          75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAG--HIINIGSAAGLIP---  149 (265)
T ss_pred             HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEechhhcCC---
Confidence            53       5999999999876544444444   445889999876665555    444555  8999999754422   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                  ..-.+.|+.||...-.+.+..+.+.   |+.++.+.++.+ ..|.. . . +......   ...+-+.
T Consensus       150 ------------~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~-~-~~~~~~~---~~~~~~~  211 (265)
T COG0300         150 ------------TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A-K-GSDVYLL---SPGELVL  211 (265)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c-c-ccccccc---cchhhcc
Confidence                        1225679999999888777776664   788888866544 44443 1 1 1111110   0123467


Q ss_pred             eHHHHHHHHHHHHhcCC
Q 044498          236 FIDECVEGVLRLIKSDF  252 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~~  252 (366)
                      ..+|+|+..+..+++..
T Consensus       212 ~~~~va~~~~~~l~~~k  228 (265)
T COG0300         212 SPEDVAEAALKALEKGK  228 (265)
T ss_pred             CHHHHHHHHHHHHhcCC
Confidence            89999999999998753

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.2e-15  Score=132.50  Aligned_cols=195  Identities=13%  Similarity=0.049  Sum_probs=132.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccc-c------cc-ccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEH-M------ME-DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~-~------~~-~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ..++|+||||+|.||++++++|+++| ++         |++++|+.... .      .. ....+.++.+|++|.+++.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~---------V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~   77 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPAR---------VVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPK   77 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCe---------EEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHH
Confidence            35689999999999999999999985 88         99999876541 1      11 11256899999999887555


Q ss_pred             hhc------CCCEEEEcccccCCccccccCcc---hhhhhhHHHHHH----HHHHHHHcCCCceeEEEEecccccCCCCC
Q 044498           93 MTS------GVDNMSNLAADMGGMGFIQSNHS---VIMYKNTTISFD----MLEAARMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        93 ~~~------~~d~vi~~a~~~~~~~~~~~~~~---~~~~~nv~~~~~----ll~a~~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      .++      ++|++||++|..........+..   ..+.+|+.++..    +++.+++.+..  +||++||...+..   
T Consensus        78 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~--~iv~isS~~g~~~---  152 (253)
T PRK07904         78 VIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFG--QIIAMSSVAGERV---  152 (253)
T ss_pred             HHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCc--eEEEEechhhcCC---
Confidence            432      69999999997542111111111   347889887765    66677777767  9999999643211   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHH---HcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK---DFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~---~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                  ..+...|+.+|+....+.+.++.   .+++++.+++++.+..-+.   .+...     .    ...+.
T Consensus       153 ------------~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~---~~~~~-----~----~~~~~  208 (253)
T PRK07904        153 ------------RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS---AHAKE-----A----PLTVD  208 (253)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh---ccCCC-----C----CCCCC
Confidence                        12245699999998877666544   3589999998776532111   11110     0    11357


Q ss_pred             HHHHHHHHHHHHhcCCCC
Q 044498          237 IDECVEGVLRLIKSDFRE  254 (366)
Q Consensus       237 v~D~a~~~~~~l~~~~~~  254 (366)
                      .+|+|+.++.++.+....
T Consensus       209 ~~~~A~~i~~~~~~~~~~  226 (253)
T PRK07904        209 KEDVAKLAVTAVAKGKEL  226 (253)
T ss_pred             HHHHHHHHHHHHHcCCCE
Confidence            899999999999876443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.66  E-value=2.1e-15  Score=134.86  Aligned_cols=212  Identities=13%  Similarity=0.051  Sum_probs=141.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      +++++|||||+|.||++++++|+++|++         |++++|......    ......+.++.+|+++.+++.++++  
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~---------vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGAD---------IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQA   77 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            5678999999999999999999999999         998887543211    1112346789999999998877654  


Q ss_pred             -----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           ++|++||+||........   ..+....+.+|+.+...+.+++..    .+ ..  ++|++||...+....    
T Consensus        78 ~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g--~ii~isS~~~~~~~~----  151 (251)
T PRK12481         78 VEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGG--KIINIASMLSFQGGI----  151 (251)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCC--EEEEeCChhhcCCCC----
Confidence                 589999999975422111   223455688999998888776653    22 24  899999976543221    


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCe--EEecCCcceeeeee
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNF--EMWGDGKQTRSLTF  236 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~--~i~~~~~~~~~~i~  236 (366)
                                 ....|+.+|.+.+.+.+.++.+   +|+++..+.++.+. .+...... ....  .+.. ......+..
T Consensus       152 -----------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~-~~~~~~~~~~-~~p~~~~~~  218 (251)
T PRK12481        152 -----------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA-DTARNEAILE-RIPASRWGT  218 (251)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc-ChHHHHHHHh-cCCCCCCcC
Confidence                       1346999999999999988775   47888888665442 11111100 0000  0000 001123567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .+|+++++..++...    .++.+.+.+|
T Consensus       219 peeva~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        219 PDDLAGPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHHHHHHHHHhCccccCcCCceEEECCC
Confidence            999999999998642    4666776655

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.66  E-value=1.4e-14  Score=128.22  Aligned_cols=204  Identities=14%  Similarity=0.116  Sum_probs=137.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhc------
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++|||||+|.||++++++|.++|++         |++++|+....... ...++.++.+|+++.+++.++++      
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   72 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQP---------VIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHT   72 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCe---------EEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhC
Confidence            568999999999999999999999999         99999876432211 12246789999999887766542      


Q ss_pred             -CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cC--CCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 -GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NG--VMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                       ++|++||+||.......   ...+.+..+.+|+.+...+.+++..    .+  ..  ++|++||.....          
T Consensus        73 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g--~iv~~ss~~~~~----------  140 (236)
T PRK06483         73 DGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAAS--DIIHITDYVVEK----------  140 (236)
T ss_pred             CCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCc--eEEEEcchhhcc----------
Confidence             48999999996432111   1222345578898888766665544    23  34  799999853221          


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcHH-------HHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAPA-------AFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                           +......|+.+|...+.+++.++.++  ++++..+.++.+.       ........ ..+         ..-+..
T Consensus       141 -----~~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~  205 (236)
T PRK06483        141 -----GSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALA-KSL---------LKIEPG  205 (236)
T ss_pred             -----CCCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhc-cCc---------cccCCC
Confidence                 11234579999999999999999886  3666666655431       11111111 111         111346


Q ss_pred             HHHHHHHHHHHHhcC--CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD--FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~--~~~~~~i~~~~  262 (366)
                      .+|+++++..++...  .++++.+.+|.
T Consensus       206 ~~~va~~~~~l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        206 EEEIIDLVDYLLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             HHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence            899999999998643  46777776654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.66  E-value=2.4e-15  Score=136.60  Aligned_cols=214  Identities=12%  Similarity=0.010  Sum_probs=141.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++..+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   79 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAK---------VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQ   79 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            5578999999999999999999999999         9999987542211      111235788999999987776543


Q ss_pred             -------CCCEEEEcccccCCcc------------------ccccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEE
Q 044498           96 -------GVDNMSNLAADMGGMG------------------FIQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFF  146 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~------------------~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I  146 (366)
                             ++|++||+||......                  ....+....+++|+.+...+++++    ++.+..  +||
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~ii  157 (278)
T PRK08277         80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG--NII  157 (278)
T ss_pred             HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc--EEE
Confidence                   6899999999643211                  011123445778988887655544    444455  899


Q ss_pred             EEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCC-CC
Q 044498          147 FVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTST-DN  221 (366)
Q Consensus       147 ~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~-~~  221 (366)
                      ++||...+..               ..+...|+.+|.+.+.+++.++.++   ++++..+.++.+. .+........ ..
T Consensus       158 ~isS~~~~~~---------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~  222 (278)
T PRK08277        158 NISSMNAFTP---------------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGS  222 (278)
T ss_pred             EEccchhcCC---------------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccccc
Confidence            9999766532               2234579999999999999988876   6777777554331 1111111100 00


Q ss_pred             e-EE---ecCCcceeeeeeHHHHHHHHHHHHhc-C----CCCcEEecCC
Q 044498          222 F-EM---WGDGKQTRSLTFIDECVEGVLRLIKS-D----FREPLNIGSD  261 (366)
Q Consensus       222 ~-~i---~~~~~~~~~~i~v~D~a~~~~~~l~~-~----~~~~~~i~~~  261 (366)
                      . ..   .........+...+|+|++++.++.. .    .++.+.+.+|
T Consensus       223 ~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        223 LTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             chhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            0 00   00111223466789999999998875 2    4677777665

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1e-14  Score=132.11  Aligned_cols=197  Identities=15%  Similarity=0.072  Sum_probs=136.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------cccccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------~~~~~v~~~~~D~~~~~   88 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|+......             .....+.++.+|+++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~   75 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGAN---------IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDED   75 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHH
Confidence            4578999999999999999999999999         9999987542110             01124578899999999


Q ss_pred             HHHhhhc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEeccccc
Q 044498           89 NCLRMTS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIY  154 (366)
Q Consensus        89 ~l~~~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vy  154 (366)
                      ++.++++       ++|++||+||..........   +....+++|+.++.++++++...    +..  ++|++||....
T Consensus        76 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g--~iv~iss~~~~  153 (273)
T PRK08278         76 QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP--HILTLSPPLNL  153 (273)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCC--EEEEECCchhc
Confidence            8877654       68999999997542222111   23445789999999999988643    233  78898874211


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCC-cH-HHHHHHHHhCCCCeEEecCCc
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEK-AP-AAFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~-~~-~~~~~~~~~~~~~~~i~~~~~  229 (366)
                        ...           ...+...|+.+|++.+.+++.++.++   ++.+..+.+. .+ ..+...... +.        .
T Consensus       154 --~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~-~~--------~  211 (273)
T PRK08278        154 --DPK-----------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG-GD--------E  211 (273)
T ss_pred             --ccc-----------ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc-cc--------c
Confidence              100           11346789999999999999988876   6777777665 22 333332221 11        1


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      ....+...+|+++.++.++...
T Consensus       212 ~~~~~~~p~~va~~~~~l~~~~  233 (273)
T PRK08278        212 AMRRSRTPEIMADAAYEILSRP  233 (273)
T ss_pred             cccccCCHHHHHHHHHHHhcCc
Confidence            1123567899999999998764

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.1e-15  Score=134.79  Aligned_cols=215  Identities=11%  Similarity=-0.016  Sum_probs=141.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||.+++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGAN---------VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         99999875432111      11234678999999988777653


Q ss_pred             -------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                             ++|++||+|+........   ..+....+.+|+.++.++++++...   ...  ++|++||...+.       
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g--~iv~iss~~~~~-------  149 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGA--SIIQISAPQAFV-------  149 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--EEEEECChhhcc-------
Confidence                   579999999854221111   1122345779999999999887652   224  899999964331       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH--HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP--AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                              +......|+.+|...+.+++.++.++   ++++..+++..+  ...+.....................+...
T Consensus       150 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (264)
T PRK07576        150 --------PMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTK  221 (264)
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCH
Confidence                    11235579999999999999887764   577777766543  22222211100000000011112345678


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|+++++..++..+    .++.+.+.++.
T Consensus       222 ~dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        222 QDIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence            99999999999653    35566666653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.66  E-value=3.8e-15  Score=133.53  Aligned_cols=214  Identities=11%  Similarity=0.027  Sum_probs=140.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++|+||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   80 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAH---------VLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCe---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            5789999999999999999999999999         9999987542111      112246789999999988776653


Q ss_pred             -------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|++||++|.........   .+....+..|+.++.++.+++.+    .+..  +||++||...+..     
T Consensus        81 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~~ss~~~~~~-----  153 (256)
T PRK06124         81 RIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYG--RIIAITSIAGQVA-----  153 (256)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEeechhccC-----
Confidence                   4799999999654211111   12334588899988888865543    5666  8999999643221     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCe-EEecCCcceeeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNF-EMWGDGKQTRSLTF  236 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~-~i~~~~~~~~~~i~  236 (366)
                                ......|+.+|.+.+.+.+.++.++   ++++..+.+..+.. ....... .... ...........+++
T Consensus       154 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK06124        154 ----------RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPWLAQRTPLGRWGR  222 (256)
T ss_pred             ----------CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHHHHhcCCCCCCCC
Confidence                      1124579999999999988877664   67777775543311 1110000 0000 00000011234788


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++|+++++..++...    .++.+.+.+|.
T Consensus       223 ~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        223 PEEIAGAAVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HHHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence            999999999999764    35556665543

>PRK09242 tropinone reductase; Provisional

Probab=99.66  E-value=8.8e-15  Score=131.30  Aligned_cols=213  Identities=12%  Similarity=0.077  Sum_probs=140.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c--cccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D--MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~--~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++++||||+|.||++++++|.++|++         |++++|+.......      .  ...+.++.+|+++.+++..+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~---------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~   78 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGAD---------VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAI   78 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence            5689999999999999999999999999         99999875432110      1  23467889999998876665


Q ss_pred             h-------cCCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           94 T-------SGVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~-------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       .++|+|||+||......   ....+....+.+|+.++.++++++.+    .+..  ++|++||...+...  
T Consensus        79 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~ii~~sS~~~~~~~--  154 (257)
T PRK09242         79 LDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASS--AIVNIGSVSGLTHV--  154 (257)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc--eEEEECccccCCCC--
Confidence            4       36899999999642111   12223445688999999988887753    4556  89999997554321  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSL  234 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~  234 (366)
                                   .+...|+.+|...+.+++.++.++   ++++..+.++.+ ..+...... .... ..........-+
T Consensus       155 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~~~~~~  220 (257)
T PRK09242        155 -------------RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVIERTPMRRV  220 (257)
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHHhcCCCCCC
Confidence                         234579999999999999887664   788887765433 111110000 0000 000000011124


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ...+|++.++..++...    .++.+.+.++
T Consensus       221 ~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        221 GEPEEVAAAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            46899999999988643    3566777654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.66  E-value=8.7e-16  Score=136.80  Aligned_cols=204  Identities=13%  Similarity=-0.028  Sum_probs=133.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCcccc------ccccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      |+++|||||+|+||++++++|+++|++         |+++ .|+.....      ......+.++.+|++|.+++.++++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~   71 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYT---------VAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFT   71 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999999         8764 44432211      0111235789999999998877654


Q ss_pred             -------CCCEEEEcccccCCccccc----cCcchhhhhhHHHHHHHHHHHHHcC-------CCceeEEEEecccccCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQ----SNHSVIMYKNTTISFDMLEAARMNG-------VMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~----~~~~~~~~~nv~~~~~ll~a~~~~~-------~~~~r~I~~SS~~vyg~~  157 (366)
                             ++|+|||+++.........    .+....+..|+.++..+++++...-       ..  +||++||...+...
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g--~~v~~sS~~~~~~~  149 (247)
T PRK09730         72 AIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGG--AIVNVSSAASRLGA  149 (247)
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCc--EEEEECchhhccCC
Confidence                   4799999999653211111    1223568899999887777665431       23  69999996443211


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-H---------HHHHHHhCCCCeEE
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-A---------FSRKAVTSTDNFEM  224 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~---------~~~~~~~~~~~~~i  224 (366)
                      .              .....|+.+|...+.+++.++.++   +++++.+++..+. .         ....... ..+   
T Consensus       150 ~--------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~-~~~---  211 (247)
T PRK09730        150 P--------------GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKS-NIP---  211 (247)
T ss_pred             C--------------CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHh-cCC---
Confidence            1              112359999999999988877654   8888888765441 1         1111111 111   


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                            .......+|+++++..++...    .++.+++.++
T Consensus       212 ------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        212 ------MQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             ------CCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence                  111236899999999988643    3556666554

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.2e-15  Score=135.71  Aligned_cols=160  Identities=11%  Similarity=0.010  Sum_probs=116.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-ccccccceEEEccCCChhHHHhhhc------
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-MEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ||+||||||||+||++++++|+++|++         |++++|+..... ......+.++.+|+.+.+++.+++.      
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   71 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIA---------VLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAA   71 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCE---------EEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHH
Confidence            568999999999999999999999999         999998754322 1122346789999999988777331      


Q ss_pred             -----CCCEEEEcccccCCcc-cc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMG-FI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~-~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           .+|++||+|+...... ..   ..+....+.+|+.++..+.+.+.    +.+..  ++|++||...+.       
T Consensus        72 ~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~-------  142 (243)
T PRK07023         72 FVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAER--RILHISSGAARN-------  142 (243)
T ss_pred             hccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCC--EEEEEeChhhcC-------
Confidence                 4789999999754211 11   11234557889998666655554    34455  899999975543       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH--cCCcEEEeCCCcH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD--FEIECRLVGEKAP  208 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~--~~~~~~i~r~~~~  208 (366)
                              +..+...|+.+|...|.+++.++.+  .++++..+.+..+
T Consensus       143 --------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~  182 (243)
T PRK07023        143 --------AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVV  182 (243)
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcc
Confidence                    2234567999999999999988765  4788888876654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.66  E-value=6.3e-15  Score=132.73  Aligned_cols=202  Identities=13%  Similarity=0.079  Sum_probs=136.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++||||||+|+||.+++++|+++|++         |++++|+.......     ....+.++.+|++|.+.+.++++ 
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   74 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGAR---------LLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLAR   74 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999         99999875432111     12256889999999988776543 


Q ss_pred             -----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           .+|++||+||.........   .+....+++|+.++.++++++.+    .+..  ++|++||...+..       
T Consensus        75 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~-------  145 (263)
T PRK09072         75 AREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSA--MVVNVGSTFGSIG-------  145 (263)
T ss_pred             HHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC--EEEEecChhhCcC-------
Confidence                 5899999999753211111   12344578999999988888764    3344  7999888533211       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                              ......|+.+|...+.+++.++.++   ++.+..+.++.+..-+.....  ..  ...  ........++|+
T Consensus       146 --------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~~--~~~--~~~~~~~~~~~v  211 (263)
T PRK09072        146 --------YPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV--QA--LNR--ALGNAMDDPEDV  211 (263)
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc--cc--ccc--cccCCCCCHHHH
Confidence                    1124569999999998888887764   677777765544211111111  00  000  001135678999


Q ss_pred             HHHHHHHHhcCCCCc
Q 044498          241 VEGVLRLIKSDFREP  255 (366)
Q Consensus       241 a~~~~~~l~~~~~~~  255 (366)
                      |++++.+++....++
T Consensus       212 a~~i~~~~~~~~~~~  226 (263)
T PRK09072        212 AAAVLQAIEKERAER  226 (263)
T ss_pred             HHHHHHHHhCCCCEE
Confidence            999999998765443

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.66  E-value=6.4e-15  Score=127.00  Aligned_cols=187  Identities=14%  Similarity=0.094  Sum_probs=132.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc---CCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS---GVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~---~~d~v  100 (366)
                      |+++||||+|.||.+++++|.++ ++         |++++|+..           .+.+|+++.+++..+++   ++|++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~---------vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~l   59 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HE---------VITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAV   59 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-Cc---------EEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEE
Confidence            48999999999999999999998 88         999988642           46899999998888765   68999


Q ss_pred             EEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC
Q 044498          101 SNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ  175 (366)
Q Consensus       101 i~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~  175 (366)
                      ||+||.........   .+....+.+|+.++.++++++...  +..  +|+++||.....               +....
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g--~iv~iss~~~~~---------------~~~~~  122 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGG--SFTLTSGILSDE---------------PIPGG  122 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--eEEEEcccccCC---------------CCCCc
Confidence            99999643211111   223444788999999999888653  223  799998853211               12235


Q ss_pred             CchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-C
Q 044498          176 DAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-F  252 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~  252 (366)
                      ..|+.+|...+.+.+.++.++  ++++..+.++.+..-+....   ..  +.+     ..++..+|+|+++..+++.. .
T Consensus       123 ~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~---~~--~~~-----~~~~~~~~~a~~~~~~~~~~~~  192 (199)
T PRK07578        123 ASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKYG---PF--FPG-----FEPVPAARVALAYVRSVEGAQT  192 (199)
T ss_pred             hHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhhh---hc--CCC-----CCCCCHHHHHHHHHHHhcccee
Confidence            679999999999999887764  67777777665532222111   00  111     23578999999999998764 4


Q ss_pred             CCcEEe
Q 044498          253 REPLNI  258 (366)
Q Consensus       253 ~~~~~i  258 (366)
                      +++|++
T Consensus       193 g~~~~~  198 (199)
T PRK07578        193 GEVYKV  198 (199)
T ss_pred             eEEecc
Confidence            555554

>PRK07069 short chain dehydrogenase; Validated

Probab=99.66  E-value=3.3e-15  Score=133.39  Aligned_cols=211  Identities=17%  Similarity=0.120  Sum_probs=134.9

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c---cccceEEEccCCChhHHHhhhc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D---MFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~---~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +|+||||+|+||.++++.|+++|++         |++++|+.......      .   ...+.++.+|+++.+++.++++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   71 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAK---------VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLA   71 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHH
Confidence            4899999999999999999999999         99999873221110      0   0112357899999988776553


Q ss_pred             -------CCCEEEEcccccCCccccccC---cchhhhhhHH----HHHHHHHHHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTT----ISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~----~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|+|||+||..........+   ....+.+|+.    ++..++.++++.+.+  +||++||...+....   
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~ii~~ss~~~~~~~~---  146 (251)
T PRK07069         72 QAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPA--SIVNISSVAAFKAEP---  146 (251)
T ss_pred             HHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc--EEEEecChhhccCCC---
Confidence                   589999999976432111112   2334677887    677888888877777  999999976654322   


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhC--CC-CeEEecCCccee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTS--TD-NFEMWGDGKQTR  232 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~--~~-~~~i~~~~~~~~  232 (366)
                                  ....|+.+|...+.+.+.++.+.     ++++..+.+..+ ..+.......  .. ............
T Consensus       147 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (251)
T PRK07069        147 ------------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLG  214 (251)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCC
Confidence                        23469999999999998887764     355566654332 2221111110  00 000001111223


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .+..++|+++++..++..+    .++.+.+.++
T Consensus       215 ~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        215 RLGEPDDVAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            3567999999999987653    3455555444

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.4e-15  Score=136.25  Aligned_cols=214  Identities=14%  Similarity=-0.002  Sum_probs=140.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|.||.+++++|+++|++         |++++|+......      .....+.++.+|+++++++.++++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQ---------VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLD   78 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            5688999999999999999999999999         9999887543211      111245788999999988777653


Q ss_pred             -------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||.........   .+....+.+|+.+...+++++...    + ..  ++|++||..-.  ... 
T Consensus        79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~~--~~~-  153 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGG--VIINTASMSGH--IIN-  153 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCc--EEEEECcHHhc--CCC-
Confidence                   6999999999754221111   122344789999988888877542    2 23  68999885321  100 


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                .......|+.+|.+.+.+.+.++.++   |+++..+.++.+ ..+..........   +........+..
T Consensus       154 ----------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~---~~~~~~~~r~~~  220 (253)
T PRK05867        154 ----------VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPL---WEPKIPLGRLGR  220 (253)
T ss_pred             ----------CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHH---HHhcCCCCCCcC
Confidence                      01123579999999999999988765   788877765543 1111100000000   000011123567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+|+|+++..++...    .++++.+.+|.
T Consensus       221 p~~va~~~~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        221 PEELAGLYLYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence            999999999998653    46778877664

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.65  E-value=3.6e-15  Score=132.86  Aligned_cols=211  Identities=15%  Similarity=0.070  Sum_probs=134.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC-Cccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN-KNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~-~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++.++||||+|+||++++++|+++|++         |++..+. ......      .....+..+.+|+.+.+++.++++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~---------vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFK---------VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFD   73 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCE---------EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            468999999999999999999999998         8775432 221110      112234677899999988776653


Q ss_pred             -------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|+|||+||.......   ...+....+.+|+.+...+.+++    ++.+..  +||++||.....      
T Consensus        74 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~isS~~~~~------  145 (246)
T PRK12938         74 KVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWG--RIINISSVNGQK------  145 (246)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe--EEEEEechhccC------
Confidence                   68999999997532111   12233455788999866655544    455666  899999963221      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                               +..+...|+.+|.+.+.+.+.++.+   .++++..+++..+. .+......  ..............+...
T Consensus       146 ---------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~  214 (246)
T PRK12938        146 ---------GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP--DVLEKIVATIPVRRLGSP  214 (246)
T ss_pred             ---------CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcCh--HHHHHHHhcCCccCCcCH
Confidence                     1123567999999999988887765   36778777654332 11111000  000000001112235678


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      +|+++++..++...    .++.+.+.++
T Consensus       215 ~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        215 DEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            99999999988653    4666777654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.65  E-value=4.4e-15  Score=132.95  Aligned_cols=213  Identities=13%  Similarity=0.057  Sum_probs=141.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      ++++++||||+|.||.+++++|.+.|++         |+++++......    ......+..+.+|+++.+++.++++  
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~---------vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   79 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCD---------IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERA   79 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            5678999999999999999999999999         998876543211    1112245788999999988877654  


Q ss_pred             -----CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           ++|++||+||.......   ...+....+.+|+.++.++++++...    + ..  ++|++||...+....    
T Consensus        80 ~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g--~iv~isS~~~~~~~~----  153 (253)
T PRK08993         80 VAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGG--KIINIASMLSFQGGI----  153 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe--EEEEECchhhccCCC----
Confidence                 58999999997532211   12234556889999999888877542    2 23  799999976654321    


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCC-eEEecCCcceeeeeeH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDN-FEMWGDGKQTRSLTFI  237 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~-~~i~~~~~~~~~~i~v  237 (366)
                                 ....|+.+|++.+.+.+.++.++   ++++..++++.+. .+.......... -.+... -....+.-.
T Consensus       154 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~-~p~~r~~~p  221 (253)
T PRK08993        154 -----------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR-IPAGRWGLP  221 (253)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc-CCCCCCcCH
Confidence                       13469999999999999888774   7788777665442 121111000000 000000 011236678


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      +|+++.+..++...    .++.+.+.+|
T Consensus       222 ~eva~~~~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        222 SDLMGPVVFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEECCC
Confidence            99999999998653    4566666544

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.9e-15  Score=133.55  Aligned_cols=213  Identities=8%  Similarity=0.012  Sum_probs=140.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++|+||||+|+||++++++|.++|++         |++++|+......      ....++.++.+|+++.+++.++++
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~---------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   78 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAK---------VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVA   78 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            5689999999999999999999999999         9999987643211      112246789999999988877654


Q ss_pred             -------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc----C--------CCceeEEEEecccc
Q 044498           96 -------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN----G--------VMSLTFFFVSSACI  153 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~----~--------~~~~r~I~~SS~~v  153 (366)
                             .+|++||+++........   ..+....+..|+.+..++++++...    .        ..  ++|++||...
T Consensus        79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~  156 (258)
T PRK06949         79 HAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGG--RIINIASVAG  156 (258)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCe--EEEEECcccc
Confidence                   589999999965321111   1234456888999998888876532    1        23  8999999754


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-HHHHHHhCCCCeEEecCCc
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-FSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~~~~~  229 (366)
                      +..               ..+..+|+.+|+..+.+++.++.++   ++++.+++++.+.. +............+... .
T Consensus       157 ~~~---------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~  220 (258)
T PRK06949        157 LRV---------------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSM-L  220 (258)
T ss_pred             cCC---------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhc-C
Confidence            421               1235679999999999999887764   78888887654411 11100000000000000 0


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ....+...+|+++++..++...    .+..+.+.+|
T Consensus       221 ~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        221 PRKRVGKPEDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             CCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            1123556899999999998643    3455555443

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4.8e-15  Score=132.86  Aligned_cols=210  Identities=15%  Similarity=0.059  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhc-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      ++++|+||||+|+||.+++++|.++|++         |++++|+....... ......++.+|+++.+++.++++     
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGAT---------VVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999         99999876532211 11223688999999988877664     


Q ss_pred             --CCCEEEEcccccCCcc--c---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecc-cccCCCCCCCCC
Q 044498           96 --GVDNMSNLAADMGGMG--F---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSA-CIYPEFKQLDTD  163 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~--~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~-~vyg~~~~~~~~  163 (366)
                        ++|+|||+||......  .   ........+.+|+.++..+++.+.    +.+..  ++|++||. .++|..      
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g--~iv~~sS~~~~~g~~------  148 (255)
T PRK06057         77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG--SIINTASFVAVMGSA------  148 (255)
T ss_pred             cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc--EEEEEcchhhccCCC------
Confidence              5899999999653211  1   111234567889998877666654    34445  89999885 344421      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCC-----CCeEEecCCcceeee
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTST-----DNFEMWGDGKQTRSL  234 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~-----~~~~i~~~~~~~~~~  234 (366)
                               .+...|+.+|++.+.+.+.++.++   +++++.++++.+ ..+........     ......    ....+
T Consensus       149 ---------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~  215 (255)
T PRK06057        149 ---------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHV----PMGRF  215 (255)
T ss_pred             ---------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcC----CCCCC
Confidence                     124569999988887777655443   788888876544 11211111100     000000    11246


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..++|+++++..++...    .++.+.+.++
T Consensus       216 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        216 AEPEEIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            88999999998887542    3666776654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.2e-14  Score=129.16  Aligned_cols=216  Identities=15%  Similarity=0.045  Sum_probs=141.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----ccccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----MEDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|......     ......+.++.+|+++.+++.++++ 
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~---------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   75 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGAN---------LILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKR   75 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence            4578999999999999999999999999         999998753111     0112345788999999988777654 


Q ss_pred             ------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            .+|+|||+||..........+   ....+..|+.+..++++++..    .+..  ++|++||....  ..    
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~isS~~~~--~~----  147 (263)
T PRK08226         76 AKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDG--RIVMMSSVTGD--MV----  147 (263)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc--EEEEECcHHhc--cc----
Confidence                  589999999975322111222   233578899999988887654    3445  89999985321  00    


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC--eE-E---ecCCccee
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN--FE-M---WGDGKQTR  232 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~--~~-i---~~~~~~~~  232 (366)
                              +......|+.+|...+.+.+.++.++   ++++..++++.+ ..+.........+  .. .   ........
T Consensus       148 --------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  219 (263)
T PRK08226        148 --------ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLR  219 (263)
T ss_pred             --------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCC
Confidence                    11234579999999999999988765   678877766544 2222222110000  00 0   00111122


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+...+|+++++..++...    .++++.+.+|.
T Consensus       220 ~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        220 RLADPLEVGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             CCCCHHHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence            3568999999998887542    46667776653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=1.6e-14  Score=132.94  Aligned_cols=209  Identities=11%  Similarity=-0.007  Sum_probs=140.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||+|+||.+++++|+++|++         |++.++.......       .....+.++.+|+++.+.+.+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~---------Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~   81 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGAT---------VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELV   81 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            6689999999999999999999999999         9988875432111       11224678999999998877765


Q ss_pred             c------CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHHc--------C---CCceeEEEEeccccc
Q 044498           95 S------GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARMN--------G---VMSLTFFFVSSACIY  154 (366)
Q Consensus        95 ~------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~---~~~~r~I~~SS~~vy  154 (366)
                      +      ++|++||+||......   ....+....+.+|+.++.++++++..+        +   ..  ++|++||...+
T Consensus        82 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~  159 (306)
T PRK07792         82 ATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYG--RIVNTSSEAGL  159 (306)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCc--EEEEECCcccc
Confidence            3      5899999999764321   112233456889999999998876421        0   13  79999986533


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcce
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQT  231 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (366)
                      ...               .....|+.+|...+.+.+.++.+   +++++..+.+.....+...... ... ...   ...
T Consensus       160 ~~~---------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~~t~~~~~~~~-~~~-~~~---~~~  219 (306)
T PRK07792        160 VGP---------------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRARTAMTADVFG-DAP-DVE---AGG  219 (306)
T ss_pred             cCC---------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCCCCchhhhhcc-ccc-hhh---hhc
Confidence            211               12346999999999999888775   4788888876543333222211 100 000   011


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ...+..+|++.++..++...    .+++|.+.++
T Consensus       220 ~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        220 IDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             cCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence            23457999999999888542    4667777654

>PRK08589 short chain dehydrogenase; Validated

Probab=99.63  E-value=1.6e-14  Score=130.84  Aligned_cols=213  Identities=18%  Similarity=0.074  Sum_probs=139.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|.||.+++++|+++|++         |++++|+ .....      .....+.++.+|+++.+++.++++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~---------vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   74 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAY---------VLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFAS   74 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHH
Confidence            4678999999999999999999999999         9999987 32111      112246789999999988776553


Q ss_pred             -------CCCEEEEcccccCCcccccc-C---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS-N---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~-~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .+|++||+||.......... +   ....+.+|+.+...+++++..    .+ .  ++|++||...+...   
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g--~iv~isS~~~~~~~---  148 (272)
T PRK08589         75 EIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-G--SIINTSSFSGQAAD---  148 (272)
T ss_pred             HHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C--EEEEeCchhhcCCC---
Confidence                   58999999997532111111 2   234467888887766665543    33 4  89999996543221   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCC-----CeE-EecCCcc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTD-----NFE-MWGDGKQ  230 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~-----~~~-i~~~~~~  230 (366)
                                  .....|+.+|.+.+.+++.++.++   ++++..+.++.+ ..+.........     ... .......
T Consensus       149 ------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (272)
T PRK08589        149 ------------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP  216 (272)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC
Confidence                        124579999999999999988765   678877766544 222222111000     000 0000011


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+...+|+++++..++...    .++.+.+.++.
T Consensus       217 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        217 LGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence            123567999999999998643    46677776654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.63  E-value=7.9e-15  Score=131.04  Aligned_cols=202  Identities=13%  Similarity=0.050  Sum_probs=130.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhcC--
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTSG--   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~~--   96 (366)
                      |++|+||||+|+||++++++|+++|++         |++++|...+...    ....++.++.+|+++.+++.++++.  
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   71 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTH---------VISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEIL   71 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCE---------EEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999         9999987632211    1123567899999999888776642  


Q ss_pred             -------C--CEEEEcccccCCcccc----ccCcchhhhhhHHHHHHHHHHH----HHcC-CCceeEEEEecccccCCCC
Q 044498           97 -------V--DNMSNLAADMGGMGFI----QSNHSVIMYKNTTISFDMLEAA----RMNG-VMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        97 -------~--d~vi~~a~~~~~~~~~----~~~~~~~~~~nv~~~~~ll~a~----~~~~-~~~~r~I~~SS~~vyg~~~  158 (366)
                             .  .++||+||........    ..+....+++|+.+...+++.+    ++.+ .+  +||++||...+.   
T Consensus        72 ~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~---  146 (251)
T PRK06924         72 SSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDK--RVINISSGAAKN---  146 (251)
T ss_pred             HhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCc--eEEEecchhhcC---
Confidence                   1  2789999875422111    1223344667888765555544    3332 45  799999965421   


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcHH-HHHHHHHhC-CCCeEEe---cCC
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAPA-AFSRKAVTS-TDNFEMW---GDG  228 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~~-~~~~~~~~~-~~~~~i~---~~~  228 (366)
                                  +..+...|+.+|...+.+.+.++.+.     ++++..++++.+. .+....... .......   ...
T Consensus       147 ------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  214 (251)
T PRK06924        147 ------------PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITL  214 (251)
T ss_pred             ------------CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHH
Confidence                        23446789999999999999887663     5777777766442 222221110 0100000   000


Q ss_pred             cceeeeeeHHHHHHHHHHHHhc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~  250 (366)
                      .....+..++|+|+.+..++..
T Consensus       215 ~~~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        215 KEEGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             hhcCCcCCHHHHHHHHHHHHhc
Confidence            0011257899999999999876

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.63  E-value=1.4e-14  Score=130.61  Aligned_cols=214  Identities=14%  Similarity=0.047  Sum_probs=142.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .+++++||||+|.||.+++++|+++|++         |++++|.......      ....++.++.+|+++.+++.++++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~---------vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGAT---------IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVS   79 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            5578999999999999999999999999         9998887643211      112246789999999998877663


Q ss_pred             -------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEeccc-ccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSAC-IYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~-vyg~~~~~  160 (366)
                             .+|++||+||.........   .+....+.+|+.+...+.+++..    .+..  +||++||.. .++     
T Consensus        80 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~-----  152 (265)
T PRK07097         80 QIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHG--KIINICSMMSELG-----  152 (265)
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCc--EEEEEcCccccCC-----
Confidence                   4899999999764322222   22344477898888777666543    4555  899999953 222     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHh---CCCCeEEe---cCCcc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVT---STDNFEMW---GDGKQ  230 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~---~~~~~~i~---~~~~~  230 (366)
                                 ..+...|+.+|...+.+.+.++.++   ++.+..+.++.+. .+......   .+......   .....
T Consensus       153 -----------~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
T PRK07097        153 -----------RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP  221 (265)
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC
Confidence                       1235679999999999999988875   7888888665442 11111110   00000000   00001


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+...+|++..+..++...    .++.+.+.+|.
T Consensus       222 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        222 AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            123567899999999998652    46667776654

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5.3e-15  Score=132.31  Aligned_cols=213  Identities=10%  Similarity=0.004  Sum_probs=138.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++++||||+|.||+++++.|+++|++         |++++|+.......      ....+.++.+|+++++++.++++ 
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGAN---------VVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQ   71 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            368999999999999999999999999         99999875432111      11346789999999988776553 


Q ss_pred             ------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|++||+||.......   ...+....+++|+.++.++++++.+    .+ ..  ++|++||..-+..     
T Consensus        72 ~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g--~ii~isS~~~~~~-----  144 (252)
T PRK07677         72 IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKG--NIINMVATYAWDA-----  144 (252)
T ss_pred             HHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCE--EEEEEcChhhccC-----
Confidence                  58999999985421111   1122345689999999999988853    22 23  7999998642211     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcHH--HHHHHHHhCCCCe-EEecCCcceeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAPA--AFSRKAVTSTDNF-EMWGDGKQTRSL  234 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~~--~~~~~~~~~~~~~-~i~~~~~~~~~~  234 (366)
                                ......|+.+|...+.+.+.++.++    |+++..++++.+.  .+...... .... ...........+
T Consensus       145 ----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  213 (252)
T PRK07677        145 ----------GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE-SEEAAKRTIQSVPLGRL  213 (252)
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC-CHHHHHHHhccCCCCCC
Confidence                      1123469999999999999877764    6777777665442  11111100 0000 000000111235


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+|+++++..++...    .++.+.+.+|.
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        214 GTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             CCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence            67899999998887542    46667776553

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.62  E-value=6.5e-15  Score=132.42  Aligned_cols=214  Identities=12%  Similarity=-0.007  Sum_probs=134.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||++.||++++++|+++|++         |+++.|.......        .....+.++.+|+++++++.++
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   77 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVN---------IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKEL   77 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4579999999999999999999999999         9887654322111        0123467899999999887766


Q ss_pred             hc-------CCCEEEEcccccCCc------ccccc---CcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccc
Q 044498           94 TS-------GVDNMSNLAADMGGM------GFIQS---NHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~------~~~~~---~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~v  153 (366)
                      ++       ++|++||+||..+..      .....   +....+.+|+.+...+.+.+    ++.+..  ++|++||...
T Consensus        78 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~  155 (260)
T PRK08416         78 FKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGG--SIISLSSTGN  155 (260)
T ss_pred             HHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCE--EEEEEecccc
Confidence            53       589999999864210      01111   12234666776655544443    334445  8999999532


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCC
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDG  228 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~  228 (366)
                      +-               +......|+.+|++.+.+.+.++.++   ++++..+.++.+ ..+...... .... ......
T Consensus       156 ~~---------------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~  219 (260)
T PRK08416        156 LV---------------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEEL  219 (260)
T ss_pred             cc---------------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-CHHHHHHHHhc
Confidence            11               11124579999999999999998876   788877766544 222111100 0000 000000


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .....+...+|++.+++.++...    .++.+.+.+|.
T Consensus       220 ~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        220 SPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             CCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            01123567999999999998653    46677776553

>TIGR02415 23BDH acetoin reductases

Probab=99.62  E-value=1.3e-14  Score=129.92  Aligned_cols=211  Identities=14%  Similarity=0.037  Sum_probs=136.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      ++++||||+|+||.+++++|++.|++         |++++|+.....      ......+.++.+|+++++++.+++.  
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~   71 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFA---------VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQA   71 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            46999999999999999999999999         999988753221      1112246788999999998877643  


Q ss_pred             -----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccc-cCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACI-YPEFKQLD  161 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~v-yg~~~~~~  161 (366)
                           .+|+|||+|+.........   .+....+.+|+.++..+++++..    .+ ..  ++|++||... ++.     
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~-----  144 (254)
T TIGR02415        72 AEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGG--KIINAASIAGHEGN-----  144 (254)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe--EEEEecchhhcCCC-----
Confidence                 5799999999653211112   22345588999988877665543    33 24  8999998533 321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHH-HHHHhC---CCCeEE------ecCC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFS-RKAVTS---TDNFEM------WGDG  228 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~-~~~~~~---~~~~~i------~~~~  228 (366)
                                 ...+.|+.+|+..+.+.+.++.++   ++.+..+++..+..-+ ......   .....+      +...
T Consensus       145 -----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (254)
T TIGR02415       145 -----------PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSE  213 (254)
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhh
Confidence                       125579999999999998887765   6777777665442211 111110   000000      0000


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcCC----CCcEEecCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSDF----REPLNIGSD  261 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~~----~~~~~i~~~  261 (366)
                      .....+..++|+++++..++....    ++.+.+.++
T Consensus       214 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       214 IALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             CCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence            111236788999999999997642    455555544

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.62  E-value=1.2e-14  Score=129.04  Aligned_cols=203  Identities=17%  Similarity=0.100  Sum_probs=133.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +.+|||||+|+||++++++|+++|++         |+++.|.......       .....+.++.+|+++++++.++++ 
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYR---------VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAK   71 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHH
Confidence            47999999999999999999999999         9988873221110       012246799999999988776553 


Q ss_pred             ------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHH----HHHHcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLE----AARMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            .+|+|||+||.......   ...+....+..|+.++..+++    .+++.+.+  ++|++||.....       
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~iss~~~~~-------  142 (242)
T TIGR01829        72 VEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG--RIINISSVNGQK-------  142 (242)
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEcchhhcC-------
Confidence                  58999999996532111   112234457788888766544    44556666  899999953221       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCcc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                              ...+...|+.+|...+.+++.++.++   ++++..+++..+         ..++..... ..         .
T Consensus       143 --------~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~-~~---------~  204 (242)
T TIGR01829       143 --------GQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVA-QI---------P  204 (242)
T ss_pred             --------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHh-cC---------C
Confidence                    11224569999999998888876654   778877755432         111111111 11         1


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+...+|+++++..++..+    .++.+.+.++.
T Consensus       205 ~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       205 VGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            122456789999998877553    46778877664

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.8e-14  Score=125.27  Aligned_cols=195  Identities=10%  Similarity=0.004  Sum_probs=136.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhc----CCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTS----GVD   98 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~----~~d   98 (366)
                      |+++||||+|.||+++++.|.++|++         |++++|+..+.... ...++.++.+|+++.+++.++++    ++|
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id   71 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHK---------VTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLD   71 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCc
Confidence            47999999999999999999999999         99999875432211 11245788999999998887764    589


Q ss_pred             EEEEcccccCC---cc---c--cccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           99 NMSNLAADMGG---MG---F--IQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        99 ~vi~~a~~~~~---~~---~--~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      ++||+|+....   +.   .  ...+....+++|+.+..++++++...  ...  ++|++||..       .        
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g--~Iv~isS~~-------~--------  134 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG--SIISVVPEN-------P--------  134 (223)
T ss_pred             EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--eEEEEecCC-------C--------
Confidence            99999984210   10   0  11233556889999999999888653  223  899999853       1        


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                          .+...|+.+|+..+.+.+.++.++   ++++..+.++.+. ..... ..   .     .+     ....+|+++++
T Consensus       135 ----~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~-~~---~-----~p-----~~~~~~ia~~~  196 (223)
T PRK05884        135 ----PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG-LS---R-----TP-----PPVAAEIARLA  196 (223)
T ss_pred             ----CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh-cc---C-----CC-----CCCHHHHHHHH
Confidence                113579999999999999887764   6777777665442 11111 00   0     00     12689999999


Q ss_pred             HHHHhcC----CCCcEEecCCC
Q 044498          245 LRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       245 ~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..++...    .++++.+.+|.
T Consensus       197 ~~l~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        197 LFLTTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             HHHcCchhhccCCcEEEeCCCe
Confidence            9998653    46777776654

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.1e-14  Score=132.64  Aligned_cols=173  Identities=15%  Similarity=0.071  Sum_probs=119.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++++||||||.||.+++++|+++|++         |++++|+..+....        ....+.++.+|+.+.+++.++
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~---------Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~   83 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAE---------VILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAAL   83 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHH
Confidence            5689999999999999999999999999         99999875432110        122467899999999888776


Q ss_pred             hc-------CCCEEEEcccccCCcc--ccccCcchhhhhhHHHHHHHHHHHHH---cCCCceeEEEEecccccCCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMG--FIQSNHSVIMYKNTTISFDMLEAARM---NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~---~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      ++       .+|++||+||......  ......+..+.+|+.+...+.+.+..   .+..  |+|++||...+.......
T Consensus        84 ~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~--riv~vsS~~~~~~~~~~~  161 (313)
T PRK05854         84 GEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRA--RVTSQSSIAARRGAINWD  161 (313)
T ss_pred             HHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCC--CeEEEechhhcCCCcCcc
Confidence            53       5899999999764321  12234455688999997777666552   2334  899999975432211111


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH-----cCCcEEEeCCCcH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD-----FEIECRLVGEKAP  208 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~-----~~~~~~i~r~~~~  208 (366)
                       ++.++  .+..+...|+.+|++.+.+.+.++.+     .++.+..+.++.+
T Consensus       162 -~~~~~--~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v  210 (313)
T PRK05854        162 -DLNWE--RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVA  210 (313)
T ss_pred             -ccccc--ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEeccee
Confidence             01211  23456778999999999999988764     2566666655433

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.60  E-value=4e-14  Score=133.60  Aligned_cols=193  Identities=15%  Similarity=0.062  Sum_probs=125.7

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhcC
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      +.++++|+||||+|+||++++++|.++|++         |++++|+.......   ....+..+.+|++|.+++.+.+.+
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~---------Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~  245 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAK---------VVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEK  245 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCC
Confidence            346789999999999999999999999999         99998875432111   112346788999999999998999


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc----C---CCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN----G---VMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~---~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      +|++||+||..........+....+++|+.++.++++++.+.    +   .+ ..+|.+|++..      .         
T Consensus       246 IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~-~iiVn~Ssa~~------~---------  309 (406)
T PRK07424        246 VDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATK-EVWVNTSEAEV------N---------  309 (406)
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-eEEEEEccccc------c---------
Confidence            999999999653222222344567899999999999887542    2   12 02444444211      0         


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHh
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK  249 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  249 (366)
                       + .....|+.+|.+.+.+..-...+.++.+..+.+..+        +  ...    ++   ...+..+|+|+.++.+++
T Consensus       310 -~-~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~--------~--t~~----~~---~~~~spe~vA~~il~~i~  370 (406)
T PRK07424        310 -P-AFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPF--------K--SNL----NP---IGVMSADWVAKQILKLAK  370 (406)
T ss_pred             -C-CCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCC--------c--CCC----Cc---CCCCCHHHHHHHHHHHHH
Confidence             1 113469999999988653222223333333322211        1  000    00   123678999999999998


Q ss_pred             cCCCCcE
Q 044498          250 SDFREPL  256 (366)
Q Consensus       250 ~~~~~~~  256 (366)
                      ++...++
T Consensus       371 ~~~~~i~  377 (406)
T PRK07424        371 RDFRNII  377 (406)
T ss_pred             CCCCEEE
Confidence            7654433

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.60  E-value=5.3e-14  Score=125.15  Aligned_cols=191  Identities=13%  Similarity=0.038  Sum_probs=125.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-cccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-EDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|+...... ........+.+|+++.+++.+.+.++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDil   83 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAK---------VIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVL   83 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCE---------EEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEE
Confidence            4578999999999999999999999999         9999887522111 11111257889999999999888899999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-------CCCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-------GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-------~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                      |||||..........+....+++|+.++.++++++...       +..  .++..||.+...               + .
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~--~iiv~ss~a~~~---------------~-~  145 (245)
T PRK12367         84 ILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPK--EIWVNTSEAEIQ---------------P-A  145 (245)
T ss_pred             EECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCe--EEEEEecccccC---------------C-C
Confidence            99999653222223345667899999999999887552       111  344444432111               1 1


Q ss_pred             CCCchHHHHHHHHHHHHHHHH-------HcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHH
Q 044498          174 PQDAYGLEKLATEGLCKHYTK-------DFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLR  246 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  246 (366)
                      ....|+.||.+.+.+. .+..       ..++.+..+.++.+..          ++   . .   ...+..+|+|+.++.
T Consensus       146 ~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t----------~~---~-~---~~~~~~~~vA~~i~~  207 (245)
T PRK12367        146 LSPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRS----------EL---N-P---IGIMSADFVAKQILD  207 (245)
T ss_pred             CCchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCccc----------cc---C-c---cCCCCHHHHHHHHHH
Confidence            2346999999976433 3333       2355555554443210          00   0 0   114678999999999


Q ss_pred             HHhcCCCCcEE
Q 044498          247 LIKSDFREPLN  257 (366)
Q Consensus       247 ~l~~~~~~~~~  257 (366)
                      ++.+....++.
T Consensus       208 ~~~~~~~~~~~  218 (245)
T PRK12367        208 QANLGLYLIIV  218 (245)
T ss_pred             HHhcCCceEEE
Confidence            98776554443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.60  E-value=3.4e-14  Score=128.15  Aligned_cols=211  Identities=15%  Similarity=0.066  Sum_probs=141.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++++||||+|+||.+++++|+++|++         |++++++......   ..+.++.+|+++++++.++++      
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~---------v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGAN---------VVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999         9999887654321   245789999999988877653      


Q ss_pred             -CCCEEEEcccccCCcc------------ccccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCC
Q 044498           96 -GVDNMSNLAADMGGMG------------FIQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~------------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~  158 (366)
                       .+|++||+||......            ....+....+.+|+.++..+++++...    +..  ++|++||...+..  
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~--  151 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDG--VIVNMSSEAGLEG--  151 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCc--EEEEEccccccCC--
Confidence             5899999999643210            111222446889999999998888653    334  7999999654321  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH--HHH----HHHHh--CCCCe-----
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA--AFS----RKAVT--STDNF-----  222 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~--~~~----~~~~~--~~~~~-----  222 (366)
                                   ......|+.+|...+.+++.++.++   ++++..+.++.+.  .+.    .....  .+...     
T Consensus       152 -------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (266)
T PRK06171        152 -------------SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRA  218 (266)
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHh
Confidence                         1224679999999999999888764   7888888665441  110    00000  00000     


Q ss_pred             EEec-CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          223 EMWG-DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       223 ~i~~-~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .+.. .......+...+|+|.++..++...    .++++++.+|
T Consensus       219 ~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        219 GYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             hhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence            0000 0111223567899999999988643    4667777655

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.60  E-value=3.4e-14  Score=131.85  Aligned_cols=201  Identities=13%  Similarity=0.016  Sum_probs=135.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT-   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~-   94 (366)
                      .+++|+||||+|.||++++++|.++|++         |++++|+......      .....+.++.+|++|.+++.+++ 
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~---------Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~   76 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGAR---------LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALAT   76 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999987643211      11224567899999999888765 


Q ss_pred             ------cCCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCC
Q 044498           95 ------SGVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        95 ------~~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ..+|++||+||..........+   ....+++|+.++.++.+++.    +.+..  ++|++||...+...    
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g--~iV~isS~~~~~~~----  150 (330)
T PRK06139         77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHG--IFINMISLGGFAAQ----  150 (330)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCC--EEEEEcChhhcCCC----
Confidence                  3689999999965432222222   23458899999888777654    34445  89999996543221    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                 .....|+.+|.....+.+.++.+.    ++.+..+.+..+ ..+.........     ........+..
T Consensus       151 -----------p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~~  214 (330)
T PRK06139        151 -----------PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-----RRLTPPPPVYD  214 (330)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-----ccccCCCCCCC
Confidence                       124579999999888888877663    567777755443 222111100000     00011123568


Q ss_pred             HHHHHHHHHHHHhcCCC
Q 044498          237 IDECVEGVLRLIKSDFR  253 (366)
Q Consensus       237 v~D~a~~~~~~l~~~~~  253 (366)
                      .+|+|++++.++.++..
T Consensus       215 pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        215 PRRVAKAVVRLADRPRA  231 (330)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999987643

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.60  E-value=2.7e-14  Score=125.25  Aligned_cols=188  Identities=13%  Similarity=0.070  Sum_probs=132.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh---c--CC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT---S--GV   97 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~---~--~~   97 (366)
                      |++++||||+|+||++++++|+++|++         |++++|+..........+++++.+|+++.+.+.+++   .  ++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWR---------VIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEAL   71 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCE---------EEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence            578999999999999999999999999         999998765432222234678999999998887753   2  48


Q ss_pred             CEEEEcccccCCcc-----ccccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecc-cccCCCCCCCCCccccc
Q 044498           98 DNMSNLAADMGGMG-----FIQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSA-CIYPEFKQLDTDVKESE  168 (366)
Q Consensus        98 d~vi~~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~-~vyg~~~~~~~~~~e~~  168 (366)
                      |+|||+++......     ....+....++.|+.++.++++++.+.   ...  ++|++||. ..++...          
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g--~iv~isS~~~~~~~~~----------  139 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGG--VLAVLSSRMGSIGDAT----------  139 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCC--eEEEEcCccccccccc----------
Confidence            99999999753211     122334567899999999999988752   223  68998885 3444211          


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF-EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~  247 (366)
                         ..+...|+.+|...+.+++.++.++ ++++..+.++.+..-+   .         .+    ...+..++.++.+..+
T Consensus       140 ---~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~---~---------~~----~~~~~~~~~~~~~~~~  200 (222)
T PRK06953        140 ---GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM---G---------GA----QAALDPAQSVAGMRRV  200 (222)
T ss_pred             ---CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC---C---------CC----CCCCCHHHHHHHHHHH
Confidence               1223469999999999999887765 5677777665431110   0         01    1135678888888887


Q ss_pred             Hhc
Q 044498          248 IKS  250 (366)
Q Consensus       248 l~~  250 (366)
                      +..
T Consensus       201 ~~~  203 (222)
T PRK06953        201 IAQ  203 (222)
T ss_pred             HHh
Confidence            765

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.60  E-value=1.4e-13  Score=111.64  Aligned_cols=203  Identities=16%  Similarity=0.118  Sum_probs=139.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |||.|+||||.+|++|+++.+++||+         |+++.|++.+-...  .++.+++.|+.|++.+.+.+.+.|+||..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHe---------VTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA   69 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHE---------VTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISA   69 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCe---------eEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEe
Confidence            68999999999999999999999999         99999998765443  34589999999999999999999999977


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      -+..      ..+....   .......|++..+..+++  |++.++.++-.-..++..   -.  +.|..|...|...+.
T Consensus        70 ~~~~------~~~~~~~---~~k~~~~li~~l~~agv~--RllVVGGAGSL~id~g~r---Lv--D~p~fP~ey~~~A~~  133 (211)
T COG2910          70 FGAG------ASDNDEL---HSKSIEALIEALKGAGVP--RLLVVGGAGSLEIDEGTR---LV--DTPDFPAEYKPEALA  133 (211)
T ss_pred             ccCC------CCChhHH---HHHHHHHHHHHHhhcCCe--eEEEEcCccceEEcCCce---ee--cCCCCchhHHHHHHH
Confidence            6632      1222222   233367788899888998  999988754321111110   11  236667777888888


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecC----CcceeeeeeHHHHHHHHHHHHhcCC--CCcEE
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGD----GKQTRSLTFIDECVEGVLRLIKSDF--REPLN  257 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~  257 (366)
                      .+| .+..+..+..++|+.+-|...   +.- -.+...+.+-++    ...-.++|+..|.|-+++..++++.  .+-|.
T Consensus       134 ~ae-~L~~Lr~~~~l~WTfvSPaa~---f~P-GerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRft  208 (211)
T COG2910         134 QAE-FLDSLRAEKSLDWTFVSPAAF---FEP-GERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFT  208 (211)
T ss_pred             HHH-HHHHHhhccCcceEEeCcHHh---cCC-ccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeee
Confidence            777 456666666799999954321   111 111222222111    0112478999999999999998863  45554


Q ss_pred             e
Q 044498          258 I  258 (366)
Q Consensus       258 i  258 (366)
                      +
T Consensus       209 v  209 (211)
T COG2910         209 V  209 (211)
T ss_pred             e
Confidence            4

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.59  E-value=2.5e-14  Score=128.84  Aligned_cols=214  Identities=12%  Similarity=-0.017  Sum_probs=138.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++   
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGAR---------VAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTV   75 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999         99999876432211   12235789999999987776653   


Q ss_pred             ----CCCEEEEcccccCCcccc-ccC-------cchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFI-QSN-------HSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~-~~~-------~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                          .+|++||+||........ ..+       ....+++|+.++..+++++...   ...  ++|++||...+...   
T Consensus        76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~~~~~---  150 (263)
T PRK06200         76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGG--SMIFTLSNSSFYPG---  150 (263)
T ss_pred             HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCC--EEEEECChhhcCCC---
Confidence                589999999964311111 111       2345778999988888777642   223  79999997654321   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcHHH-HHHHH-Hh-CC---CCe----EEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAPAA-FSRKA-VT-ST---DNF----EMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~~~-~~~~~-~~-~~---~~~----~i~~~~  228 (366)
                                  .+...|+.+|.+.+.+.+.++.+++  +++..+.++.+.. +.... .. ..   ...    ......
T Consensus       151 ------------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
T PRK06200        151 ------------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI  218 (263)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC
Confidence                        2245699999999999999988763  5565555543311 11000 00 00   000    000011


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC-----CCCcEEecCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD-----FREPLNIGSD  261 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~  261 (366)
                      .....+...+|++.++..++...     .++.+.+.+|
T Consensus       219 ~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        219 TPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             CCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence            11234667899999999988643     4566777655

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.9e-14  Score=125.32  Aligned_cols=163  Identities=11%  Similarity=0.046  Sum_probs=116.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhc-----C
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTS-----G   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~-----~   96 (366)
                      |++|+||||+|+||++++++|.++|++         |++++|+....... ...++.++.+|++|.+++.++++     +
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQ---------VTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQR   71 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCE---------EEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCC
Confidence            468999999999999999999999999         99999886543211 12246788999999988777654     5


Q ss_pred             CCEEEEcccccCCcc-----ccccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           97 VDNMSNLAADMGGMG-----FIQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      +|+|||+||......     ....+....+.+|+.+...+++++...   +..  +++++||.  +|.....        
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~iv~~ss~--~g~~~~~--------  139 (225)
T PRK08177         72 FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQG--VLAFMSSQ--LGSVELP--------  139 (225)
T ss_pred             CCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCC--EEEEEccC--ccccccC--------
Confidence            899999999753211     111223445778999988888877643   223  68888874  3332111        


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP  208 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~  208 (366)
                        +..+...|+.+|.+.+.+++.++.++   ++.+..+.++.+
T Consensus       140 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i  180 (225)
T PRK08177        140 --DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWV  180 (225)
T ss_pred             --CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCce
Confidence              12234579999999999999987764   566777776654

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.3e-14  Score=127.97  Aligned_cols=213  Identities=15%  Similarity=0.078  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCC-chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGG-FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG-~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++++++||||+| -||+++++.|+++|++         |++.+|+.......        ....+.++.+|+++.+++.+
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   86 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGAR---------VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDA   86 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHH
Confidence            567899999998 6999999999999999         99998865432110        11246788999999988776


Q ss_pred             hhc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~  157 (366)
                      +++       .+|++||+||..........   +....+..|+.+...+++++..    .+ ..  ++|++||...+-  
T Consensus        87 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g--~iv~~ss~~~~~--  162 (262)
T PRK07831         87 LIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGG--VIVNNASVLGWR--  162 (262)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc--EEEEeCchhhcC--
Confidence            653       58999999996432111221   2334477899998888777654    22 33  788888853221  


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                   +..+...|+.+|.+.+.+.+.++.+   +++++..++++.+ ..+...... ...............
T Consensus       163 -------------~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~r  228 (262)
T PRK07831        163 -------------AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS-AELLDELAAREAFGR  228 (262)
T ss_pred             -------------CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC-HHHHHHHHhcCCCCC
Confidence                         1123557999999999999999877   4788887765433 111110000 000000000011123


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      +...+|+++++..++...    .++++.+.++
T Consensus       229 ~~~p~~va~~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        229 AAEPWEVANVIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCceEEeCCC
Confidence            566899999999988653    4666666553

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.4e-14  Score=127.64  Aligned_cols=215  Identities=14%  Similarity=0.045  Sum_probs=139.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +.++|+||||+|+||++++++|.++|++.        |++++|.......      .....+.++.+|+++++++.++++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~--------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAG--------LVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA   76 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCe--------EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            45789999999999999999999999761        6777776432110      112235678999999988777653


Q ss_pred             -------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||++|..........+.   ...+..|+.++.++++++.+.    + ..  ++|++||...++..   
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g--~iv~~ss~~~~~~~---  151 (260)
T PRK06198         77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEG--TIVNIGSMSAHGGQ---  151 (260)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC--EEEEECCcccccCC---
Confidence                   5899999999653221112222   345889999999988877542    2 23  79999997665432   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHH----HHHhCCCCeEEe---cCCcc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSR----KAVTSTDNFEMW---GDGKQ  230 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~----~~~~~~~~~~i~---~~~~~  230 (366)
                                  ...+.|+.+|...|.+.+.++.++   +++++.+++..+..-+.    .... .....+.   .....
T Consensus       152 ------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~  218 (260)
T PRK06198        152 ------------PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFH-GAPDDWLEKAAATQP  218 (260)
T ss_pred             ------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhcc-CCChHHHHHHhccCC
Confidence                        124579999999999999887765   46666665543311111    0000 0000000   01112


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+++.+|+++++..++...    .++++++.++.
T Consensus       219 ~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        219 FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence            234678999999999988543    46777776543

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.59  E-value=4.6e-14  Score=129.33  Aligned_cols=208  Identities=16%  Similarity=0.094  Sum_probs=136.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhh--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMT--   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~--   94 (366)
                      .++++|||||+|.||.++++.|.++|++         |++++|+.......     ....+..+.+|++|.+++.+++  
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~   78 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAK---------LALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEE   78 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHH
Confidence            4678999999999999999999999999         99999876432110     1122445669999998877664  


Q ss_pred             -----cCCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCC
Q 044498           95 -----SGVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        95 -----~~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ..+|+|||+||..........+.   ...+++|+.++.++++++...   ...  +||++||...+...      
T Consensus        79 ~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g--~iv~isS~~~~~~~------  150 (296)
T PRK05872         79 AVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRG--YVLQVSSLAAFAAA------  150 (296)
T ss_pred             HHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--EEEEEeCHhhcCCC------
Confidence                 35899999999754222222222   445889999999999887642   234  79999997554321      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCe-EEecC-CcceeeeeeH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNF-EMWGD-GKQTRSLTFI  237 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~-~i~~~-~~~~~~~i~v  237 (366)
                               .....|+.+|...+.+.+.++.+   .++.+..+.++.+. .+........... .+... ......+...
T Consensus       151 ---------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (296)
T PRK05872        151 ---------PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSV  221 (296)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCH
Confidence                     22457999999999999887654   47888777655431 1211110000000 00000 0011235679


Q ss_pred             HHHHHHHHHHHhcCCCCc
Q 044498          238 DECVEGVLRLIKSDFREP  255 (366)
Q Consensus       238 ~D~a~~~~~~l~~~~~~~  255 (366)
                      +|+++++..++......+
T Consensus       222 ~~va~~i~~~~~~~~~~i  239 (296)
T PRK05872        222 EKCAAAFVDGIERRARRV  239 (296)
T ss_pred             HHHHHHHHHHHhcCCCEE
Confidence            999999999988654333

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.6e-13  Score=123.67  Aligned_cols=215  Identities=12%  Similarity=0.009  Sum_probs=137.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cc--cccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------ED--MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~--~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.++++||||+|.||.+++++|+++|++         |++++|+..+...      ..  ...+.++.+|+++.+++.++
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   77 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGAS---------VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAF   77 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHH
Confidence            4578999999999999999999999999         9999987643211      01  12456889999999887765


Q ss_pred             hc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       .+|++||+||..........   +....+++|+.+...+++++    ++.+..  ++|++||...+...  
T Consensus        78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~--  153 (265)
T PRK07062         78 AAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAA--SIVCVNSLLALQPE--  153 (265)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCc--EEEEeccccccCCC--
Confidence            43       58999999996432111122   22344677877766555544    444455  89999996543211  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh-CCCCeEEe---------
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT-STDNFEMW---------  225 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~-~~~~~~i~---------  225 (366)
                                   .....|+.+|...+.+.+.++.++   |+++..+.++.+ ..+...... ...+...+         
T Consensus       154 -------------~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (265)
T PRK07062        154 -------------PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALAR  220 (265)
T ss_pred             -------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhh
Confidence                         123569999999988888777664   788888866544 222111110 00000000         


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ........+...+|+++++..++...    .++++.+.+|.
T Consensus       221 ~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        221 KKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             cCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            00111223567899999999988642    56777777653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.58  E-value=5.5e-14  Score=126.33  Aligned_cols=212  Identities=13%  Similarity=0.057  Sum_probs=133.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc---
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      |++|||||+|.||++++++|.++|++         |++++|+.......     ....+.++.+|++|.+++.++++   
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~   71 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGAR---------VVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAW   71 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999         99999875431110     11246789999999988777653   


Q ss_pred             ----CCCEEEEcccccCCc--cccccCcch---hhhhhHHHHHHHHH----HHH-HcCCCceeEEEEecccccCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGM--GFIQSNHSV---IMYKNTTISFDMLE----AAR-MNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~--~~~~~~~~~---~~~~nv~~~~~ll~----a~~-~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                          ++|++||+||.....  .....+.+.   .+.+|+.+...+..    .+. +.+..  +||++||...+.      
T Consensus        72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g--~iv~isS~~~~~------  143 (259)
T PRK08340         72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKG--VLVYLSSVSVKE------  143 (259)
T ss_pred             HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCC--EEEEEeCcccCC------
Confidence                689999999964311  111222222   34566666544433    332 23344  899999975432      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHH----hC-CCCe------EEec
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAV----TS-TDNF------EMWG  226 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~----~~-~~~~------~i~~  226 (366)
                               +..+...|+.+|...+.+.+.++.++   ++++..+.++.+ ..+.....    .. +...      .+ .
T Consensus       144 ---------~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~  213 (259)
T PRK08340        144 ---------PMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREV-L  213 (259)
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHH-h
Confidence                     12235579999999999999998876   566665644432 11111110    00 0000      00 0


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .......+...+|+|+++..++...    .+++..+.+|.
T Consensus       214 ~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        214 ERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             ccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            0111233667899999999998753    46677776664

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.9e-13  Score=121.30  Aligned_cols=194  Identities=12%  Similarity=0.068  Sum_probs=128.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCC--hhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRV--MDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~--~~~l~~   92 (366)
                      ++++|+||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|+.+  .+++.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   75 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGAT---------VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQ   75 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCE---------EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHH
Confidence            4578999999999999999999999999         99999886532111       11134678889875  233333


Q ss_pred             h-------h-cCCCEEEEcccccCCcc-ccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCC
Q 044498           93 M-------T-SGVDNMSNLAADMGGMG-FIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        93 ~-------~-~~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~  156 (366)
                      +       + ..+|+|||+||...... ...   .+....+++|+.++.++++++.+    .+..  ++|++||....  
T Consensus        76 ~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~--~iv~~ss~~~~--  151 (239)
T PRK08703         76 FAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDA--SVIFVGESHGE--  151 (239)
T ss_pred             HHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCC--EEEEEeccccc--
Confidence            2       2 36899999999643211 111   12234578999998888777754    3445  89999984321  


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCccee
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      .             +......|+.+|+..+.+++.++.++    ++++.+++++.+..-+.   .     ... .+....
T Consensus       152 ~-------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~---~-----~~~-~~~~~~  209 (239)
T PRK08703        152 T-------------PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR---I-----KSH-PGEAKS  209 (239)
T ss_pred             c-------------CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc---c-----ccC-CCCCcc
Confidence            1             12234579999999999999988876    47777777765521110   0     000 111122


Q ss_pred             eeeeHHHHHHHHHHHHhc
Q 044498          233 SLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~  250 (366)
                      .+...+|++..+..++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        210 ERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             ccCCHHHHHHHHHHHhCc
Confidence            356889999999998864

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=1.5e-13  Score=122.60  Aligned_cols=194  Identities=16%  Similarity=0.161  Sum_probs=129.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCC--ChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLR--VMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~--~~~~l~~   92 (366)
                      ..++|+||||+|+||.+++++|++.|++         |++++|+......       .....+.++.+|++  +.+++.+
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~---------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~   81 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGAT---------VILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQ   81 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCc---------EEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHH
Confidence            5679999999999999999999999999         9999987642111       01123467777876  4544444


Q ss_pred             hh-------cCCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCC
Q 044498           93 MT-------SGVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        93 ~~-------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~  157 (366)
                      ++       ..+|+|||+|+......    .........+.+|+.++.++++++.    +.+.+  +||++||...... 
T Consensus        82 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~--~iv~~ss~~~~~~-  158 (247)
T PRK08945         82 LADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA--SLVFTSSSVGRQG-  158 (247)
T ss_pred             HHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC--EEEEEccHhhcCC-
Confidence            32       36899999999753211    1112234568899999888877764    45677  8999999643211 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                    ......|+.+|...+.+++.++.++   ++++..+.+..+..-+........      .   ...+
T Consensus       159 --------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~------~---~~~~  215 (247)
T PRK08945        159 --------------RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE------D---PQKL  215 (247)
T ss_pred             --------------CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc------c---ccCC
Confidence                          1224579999999999999887776   566666766654221111110000      0   1135


Q ss_pred             eeHHHHHHHHHHHHhc
Q 044498          235 TFIDECVEGVLRLIKS  250 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~  250 (366)
                      ...+|+++.+..++..
T Consensus       216 ~~~~~~~~~~~~~~~~  231 (247)
T PRK08945        216 KTPEDIMPLYLYLMGD  231 (247)
T ss_pred             CCHHHHHHHHHHHhCc
Confidence            6789999999998754

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.9e-13  Score=121.63  Aligned_cols=214  Identities=13%  Similarity=0.018  Sum_probs=141.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++++||||+|.||.++++.|++.|++         |++++|+..+....       ....+.++.+|+++.+++.+++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   76 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCH---------LHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLA   76 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence            4579999999999999999999999999         99999876432211       1224578899999999887765


Q ss_pred             c---CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           95 S---GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        95 ~---~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                      +   .+|++||++|..........+   ....+.+|+.+...+.+++    ++.+..  ++|++||..-.  .       
T Consensus        77 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~iss~~~~--~-------  145 (259)
T PRK06125         77 AEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSG--VIVNVIGAAGE--N-------  145 (259)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc--EEEEecCcccc--C-------
Confidence            4   699999999965321122222   2445788999888777766    333344  79999885221  1       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecC---------Ccce
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGD---------GKQT  231 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~---------~~~~  231 (366)
                            +..+...|+.+|...+.+.+.++.+.   ++++..+.++.+ ..++......... ..+++         ....
T Consensus       146 ------~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  218 (259)
T PRK06125        146 ------PDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRAR-AELGDESRWQELLAGLPL  218 (259)
T ss_pred             ------CCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhh-cccCCHHHHHHHhccCCc
Confidence                  12234568999999999988877654   677877766544 2322222210000 00000         0111


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+..++|+++++..++...    .+..+.+.+|.
T Consensus       219 ~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        219 GRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             CCCcCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence            23567999999999998642    46677777664

>PRK06484 short chain dehydrogenase; Validated

Probab=99.57  E-value=4.5e-14  Score=139.64  Aligned_cols=215  Identities=14%  Similarity=0.015  Sum_probs=144.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .++++|||||+|.||.+++++|.++|++         |++++|+.......   ....+..+.+|++|++++.++++   
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  338 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDR---------LLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQ  338 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHH
Confidence            6689999999999999999999999999         99999875432111   12234678999999988777653   


Q ss_pred             ----CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 ----GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                          .+|++||+||...... .   ...+....+++|+.++.++++++...  +..  +||++||...+..         
T Consensus       339 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---------  407 (520)
T PRK06484        339 ARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGG--VIVNLGSIASLLA---------  407 (520)
T ss_pred             HHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCC--EEEEECchhhcCC---------
Confidence                5899999999653211 1   11233456889999999998887764  234  8999999654321         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-eEEecCCcceeeeeeHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-FEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~  240 (366)
                            ..+...|+.+|+..+.+.+.++.++   ++++..+.++.+ ..+.......... ..-.........+..++|+
T Consensus       408 ------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di  481 (520)
T PRK06484        408 ------LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEV  481 (520)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHH
Confidence                  1235679999999999999988765   688888866544 2222111100000 0000000011235679999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCC
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |+++..++...    .++.+.+.+|.
T Consensus       482 a~~~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        482 AEAIAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHHHHHHhCccccCccCcEEEECCCc
Confidence            99999998653    46778877653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=3e-14  Score=127.48  Aligned_cols=216  Identities=12%  Similarity=0.000  Sum_probs=138.1

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---ccccccceEEEccCCChhHHHhhh--
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---MEDMFCHEFHLVDLRVMDNCLRMT--   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---~~~~~~v~~~~~D~~~~~~l~~~~--   94 (366)
                      ++++++||||+  +-||.+++++|+++|++         |++.+|+.....   ......+.++.+|+++++++.+++  
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   76 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT---------VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFAT   76 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCE---------EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHH
Confidence            56789999999  79999999999999999         999888632111   111124578999999998877654  


Q ss_pred             -----cCCCEEEEcccccCCc----ccccc---CcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCC
Q 044498           95 -----SGVDNMSNLAADMGGM----GFIQS---NHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        95 -----~~~d~vi~~a~~~~~~----~~~~~---~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           .++|++||+||.....    .....   +....+++|+.+...+.+++...-.+..++|++||.....       
T Consensus        77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-------  149 (252)
T PRK06079         77 IKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER-------  149 (252)
T ss_pred             HHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc-------
Confidence                 2589999999975321    11111   2344578899998888887765421112799999853211       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                              +......|+.+|+..+.+.+.++.++   |+++..+.++.+. .+......................+...+
T Consensus       150 --------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  221 (252)
T PRK06079        150 --------AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIE  221 (252)
T ss_pred             --------cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHH
Confidence                    11224579999999999999988764   7888877655442 11110000000000000000112356789


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCC
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      |+++++..++...    .++++.+.+|
T Consensus       222 dva~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        222 EVGNTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHHHHhCcccccccccEEEeCCc
Confidence            9999999998652    4666766654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.57  E-value=6.6e-14  Score=125.92  Aligned_cols=214  Identities=12%  Similarity=-0.007  Sum_probs=134.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||+|.||.+++++|.++|+.         |++..|.......       .....+.++.+|+++.+++.+++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~---------vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~   76 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAK---------VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLI   76 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Confidence            5679999999999999999999999998         8887775432111       11223568899999998877765


Q ss_pred             c-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHH----HHHHHHcCC-CceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDM----LEAARMNGV-MSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~l----l~a~~~~~~-~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       .+|++||+||..........   +....+.+|+.+...+    +..+.+.+. .  ++|++||...+.    
T Consensus        77 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g--~iv~~sS~~~~~----  150 (261)
T PRK08936         77 QTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKG--NIINMSSVHEQI----  150 (261)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc--EEEEEccccccC----
Confidence            3       58999999996543222222   2234578888776554    444455442 4  899999953221    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHH-HHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFS-RKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                 +..+...|+.+|.+.+.+.+.++.++   ++++..++++.+..-+ .....................+.
T Consensus       151 -----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (261)
T PRK08936        151 -----------PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIG  219 (261)
T ss_pred             -----------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCc
Confidence                       22345679999999988888877665   7888887655331110 00000000000000001112356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+|+++.+..++...    .+..+.+.++
T Consensus       220 ~~~~va~~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        220 KPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence            7899999999988653    3455665554

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.56  E-value=3e-13  Score=119.92  Aligned_cols=206  Identities=11%  Similarity=0.069  Sum_probs=133.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhhc---
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      |+||||+|+||.+++++|.++|++         |++++|.......       .....+.++.+|+++.+++.++++   
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~---------v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFE---------ICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADI   71 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            689999999999999999999999         9888765432111       112346889999999988776653   


Q ss_pred             ----CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHH-----HcCCCceeEEEEeccc-ccCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAAR-----MNGVMSLTFFFVSSAC-IYPEFKQLDT  162 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~-----~~~~~~~r~I~~SS~~-vyg~~~~~~~  162 (366)
                          .+|++||++|......   ....+....+..|+.++.++++++.     +.+..  +||++||.. .++.      
T Consensus        72 ~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~iv~vsS~~~~~~~------  143 (239)
T TIGR01831        72 AEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGG--RIITLASVSGVMGN------  143 (239)
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCe--EEEEEcchhhccCC------
Confidence                5799999999654221   1223445568899999999888752     23445  899999954 3332      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                                .+...|+.+|...+.+.+.++.++   ++++..+.++.+ ..+........... .  .......+...+
T Consensus       144 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~--~~~~~~~~~~~~  210 (239)
T TIGR01831       144 ----------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEA-L--KTVPMNRMGQPA  210 (239)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHH-H--hcCCCCCCCCHH
Confidence                      123569999999988888776654   788877754432 11111100000000 0  000112245689


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCC
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      |+++++..++...    .+....+.++
T Consensus       211 ~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       211 EVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHHHHHHHcCchhcCccCCEEEecCC
Confidence            9999999998753    3455555543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.56  E-value=8.3e-14  Score=125.35  Aligned_cols=214  Identities=12%  Similarity=0.015  Sum_probs=136.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+.+.+++.++++   
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGAR---------VAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCV   74 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHH
Confidence            5689999999999999999999999999         99999875432111   12235788999999887766543   


Q ss_pred             ----CCCEEEEcccccCCcccc-cc-------CcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFI-QS-------NHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~-~~-------~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                          ++|++||+||........ ..       +....+++|+.++..+++++.+.   ...  ++|++||...+.     
T Consensus        75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g--~iv~~sS~~~~~-----  147 (262)
T TIGR03325        75 AAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRG--SVIFTISNAGFY-----  147 (262)
T ss_pred             HHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCC--CEEEEeccceec-----
Confidence                689999999964211011 11       23456889999999999888653   223  688888854321     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHHH-H-hCCC---CeEE---ecCCc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRKA-V-TSTD---NFEM---WGDGK  229 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~~-~-~~~~---~~~i---~~~~~  229 (366)
                                +......|+.+|...+.+.+.++.+++  +++..+.++.+ ..+.... . ....   ....   .....
T Consensus       148 ----------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (262)
T TIGR03325       148 ----------PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVL  217 (262)
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcC
Confidence                      112245799999999999999998875  45555544433 1111100 0 0000   0000   00001


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC-----CCCcEEecCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD-----FREPLNIGSD  261 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~  261 (366)
                      ....+...+|+++++..++...     .++++.+.+|
T Consensus       218 p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       218 PIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             CCCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence            1223567899999998887542     3556666554

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=5.1e-14  Score=124.74  Aligned_cols=209  Identities=10%  Similarity=0.053  Sum_probs=137.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++||||||+|+||+++++.|++.|++         |++++|+.......     ...++.++.+|+++.+.+.++++ 
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   74 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQ---------VCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEK   74 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHH
Confidence            5679999999999999999999999999         99999876532111     11246889999999988776543 


Q ss_pred             ------CCCEEEEcccccCCccc-cccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 ------GVDNMSNLAADMGGMGF-IQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~-~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                            ++|.+||+++....... ...+....+..|+.+...+++.+.+.  ...  +||++||......          
T Consensus        75 ~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~iv~~ss~~~~~~----------  142 (238)
T PRK05786         75 AAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGS--SIVLVSSMSGIYK----------  142 (238)
T ss_pred             HHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCC--EEEEEecchhccc----------
Confidence                  47999999985421100 01122344678888887777777653  123  7999998643110          


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                          +..+...|+.+|...+.+++.++.++   +++++++++..+..-+..    .........  .....+..+|++++
T Consensus       143 ----~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~----~~~~~~~~~--~~~~~~~~~~va~~  212 (238)
T PRK05786        143 ----ASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP----ERNWKKLRK--LGDDMAPPEDFAKV  212 (238)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc----hhhhhhhcc--ccCCCCCHHHHHHH
Confidence                11234579999999998888887765   899999987654221100    000000000  01125678999999


Q ss_pred             HHHHHhcC----CCCcEEecCC
Q 044498          244 VLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       244 ~~~~l~~~----~~~~~~i~~~  261 (366)
                      +..++...    .++.+.+.++
T Consensus       213 ~~~~~~~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        213 IIWLLTDEADWVDGVVIPVDGG  234 (238)
T ss_pred             HHHHhcccccCccCCEEEECCc
Confidence            99998652    3555555443

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.56  E-value=3.8e-13  Score=121.41  Aligned_cols=208  Identities=13%  Similarity=0.092  Sum_probs=133.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------c-ccccceEEEccCCChhHH----H
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------E-DMFCHEFHLVDLRVMDNC----L   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~-~~~~v~~~~~D~~~~~~l----~   91 (366)
                      ..++||||+|+||++++++|+++|++         |+++.|.......       . ....+.++.+|++|.+.+    .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~---------V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~   72 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYR---------VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCE   72 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCe---------EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHH
Confidence            36999999999999999999999999         9987654322110       0 112345789999998644    3


Q ss_pred             hhh-------cCCCEEEEcccccCCccccccC--------------cchhhhhhHHHHHHHHHHHHHcCC--------Cc
Q 044498           92 RMT-------SGVDNMSNLAADMGGMGFIQSN--------------HSVIMYKNTTISFDMLEAARMNGV--------MS  142 (366)
Q Consensus        92 ~~~-------~~~d~vi~~a~~~~~~~~~~~~--------------~~~~~~~nv~~~~~ll~a~~~~~~--------~~  142 (366)
                      +++       .++|+|||+||..........+              ....+++|+.+...+++++...-.        ..
T Consensus        73 ~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~  152 (267)
T TIGR02685        73 AIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTN  152 (267)
T ss_pred             HHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCC
Confidence            322       3699999999965321111111              234588999998888877653210        00


Q ss_pred             eeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH---HH---HH
Q 044498          143 LTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA---AF---SR  213 (366)
Q Consensus       143 ~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~---~~---~~  213 (366)
                      .++|++||.....               +..+...|+.+|...+.+.+.++.+   .|+++..++++.+.   .+   ..
T Consensus       153 ~~iv~~~s~~~~~---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~  217 (267)
T TIGR02685       153 LSIVNLCDAMTDQ---------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQ  217 (267)
T ss_pred             eEEEEehhhhccC---------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHH
Confidence            1577777642211               2234568999999999999998777   47888888776531   11   01


Q ss_pred             HHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          214 KAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       214 ~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .......  ++      ...+...+|++++++.++...    .++.+.+.++..
T Consensus       218 ~~~~~~~--~~------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~  263 (267)
T TIGR02685       218 EDYRRKV--PL------GQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS  263 (267)
T ss_pred             HHHHHhC--CC------CcCCCCHHHHHHHHHHHhCcccCCcccceEEECCcee
Confidence            1111011  10      012457899999999998653    456677766543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.56  E-value=9.7e-14  Score=141.13  Aligned_cols=194  Identities=13%  Similarity=-0.021  Sum_probs=137.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++++||||+|+||.+++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  440 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGAT---------VFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVK  440 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999987643211      112346889999999998877664


Q ss_pred             -------CCCEEEEcccccCCcccc-----ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFI-----QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~-----~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                             ++|++||+||........     ..+....+.+|+.++.++++++    ++.+..  +||++||.+.+.... 
T Consensus       441 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~~~-  517 (657)
T PRK07201        441 DILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFG--HVVNVSSIGVQTNAP-  517 (657)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC--EEEEECChhhcCCCC-
Confidence                   689999999964221111     1233456889999988776665    445566  899999987765321 


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                    ....|+.+|.+.+.+.+.++.++   ++.++.++++.+..-+   .. ..  ..+.    ....+.
T Consensus       518 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~---~~-~~--~~~~----~~~~~~  573 (657)
T PRK07201        518 --------------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM---IA-PT--KRYN----NVPTIS  573 (657)
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccc---cC-cc--cccc----CCCCCC
Confidence                          24569999999999998887664   7888888766542111   11 00  0001    112467


Q ss_pred             HHHHHHHHHHHHhcC
Q 044498          237 IDECVEGVLRLIKSD  251 (366)
Q Consensus       237 v~D~a~~~~~~l~~~  251 (366)
                      .+++|+.++..+...
T Consensus       574 ~~~~a~~i~~~~~~~  588 (657)
T PRK07201        574 PEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999987654

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.6e-13  Score=125.18  Aligned_cols=211  Identities=12%  Similarity=0.073  Sum_probs=138.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC---------cccc------ccccccceEEEccCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK---------NEHM------MEDMFCHEFHLVDLRV   86 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~---------~~~~------~~~~~~v~~~~~D~~~   86 (366)
                      ++++++||||++.||.+++++|++.|++         |+++++..         ....      ......+.++.+|+++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~---------vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~   75 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGAR---------VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD   75 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC
Confidence            4578999999999999999999999999         98887654         1100      0012235688899999


Q ss_pred             hhHHHhhh-------cCCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cC------CCceeEE
Q 044498           87 MDNCLRMT-------SGVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NG------VMSLTFF  146 (366)
Q Consensus        87 ~~~l~~~~-------~~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~------~~~~r~I  146 (366)
                      .+++.+++       ..+|++||+||.........   .+....+++|+.++..+++++..    ..      ..  +||
T Consensus        76 ~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g--~Iv  153 (286)
T PRK07791         76 WDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDA--RII  153 (286)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCc--EEE
Confidence            88777654       35899999999754221112   22345588999998888777642    11      13  799


Q ss_pred             EEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCC-CCe
Q 044498          147 FVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTST-DNF  222 (366)
Q Consensus       147 ~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~-~~~  222 (366)
                      ++||...+..               ......|+.+|.+.+.+.+.++.+   .++++..+.+.....+........ ...
T Consensus       154 ~isS~~~~~~---------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg~~T~~~~~~~~~~~~~~  218 (286)
T PRK07791        154 NTSSGAGLQG---------------SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMAKP  218 (286)
T ss_pred             EeCchhhCcC---------------CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCCCCCCcchhhHHHHHhcC
Confidence            9999543211               112457999999999999888776   478888886653222211111100 000


Q ss_pred             EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          223 EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       223 ~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                         .  .....+...+|++++++.++...    .++.+.+.+|..
T Consensus       219 ---~--~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        219 ---E--EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             ---c--ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence               0  01112457999999999998642    467777776653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=8.7e-13  Score=118.30  Aligned_cols=205  Identities=12%  Similarity=0.048  Sum_probs=133.2

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc----------cc-------cccccccceEEEc
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKN----------EH-------MMEDMFCHEFHLV   82 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~----------~~-------~~~~~~~v~~~~~   82 (366)
                      ++++|+||||+|  .||.+++++|+++|++         |++.++...          ..       .......+.++.+
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~---------vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   75 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGAD---------IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMEL   75 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCe---------EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEc
Confidence            467899999995  7999999999999999         887653210          00       0011224568899


Q ss_pred             cCCChhHHHhhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHH----HHHHcCCCceeEEEE
Q 044498           83 DLRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLE----AARMNGVMSLTFFFV  148 (366)
Q Consensus        83 D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~----a~~~~~~~~~r~I~~  148 (366)
                      |+++.+++.++++       .+|++||+||..........+   ....+++|+.+...+..    .+++.+..  +||++
T Consensus        76 D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~i  153 (256)
T PRK12859         76 DLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGG--RIINM  153 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe--EEEEE
Confidence            9999988877653       489999999975322122222   23347889998776654    44444444  89999


Q ss_pred             ecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-H----HHHHHhCCC
Q 044498          149 SSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-F----SRKAVTSTD  220 (366)
Q Consensus       149 SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~----~~~~~~~~~  220 (366)
                      ||.....               +..+...|+.+|.+.+.+.+.++.+   +++++..+.++.+.. +    +........
T Consensus       154 sS~~~~~---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~  218 (256)
T PRK12859        154 TSGQFQG---------------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMF  218 (256)
T ss_pred             cccccCC---------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcC
Confidence            9964321               2234568999999999998888776   467777776554311 1    111111010


Q ss_pred             CeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          221 NFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       221 ~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                               ....+...+|+++++..++...    .++++.+.+|
T Consensus       219 ---------~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        219 ---------PFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             ---------CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence                     1122456899999999988542    3556665544

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=2e-13  Score=123.68  Aligned_cols=216  Identities=11%  Similarity=-0.005  Sum_probs=138.5

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc--ccc----cccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE--HMM----EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~--~~~----~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++.++||||+  +-||.+++++|.++|++         |++.+|+...  ...    ..... .++.+|++|.+++.++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~---------Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~   73 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE---------LAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSL   73 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCE---------EEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHH
Confidence            46799999997  79999999999999999         9988876421  110    01112 5788999999887766


Q ss_pred             hc-------CCCEEEEcccccCC----ccccc---cCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGG----MGFIQ---SNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~----~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||....    .....   .+....+++|+.+...+.+++...=.++.++|++||.+-..    
T Consensus        74 ~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~----  149 (274)
T PRK08415         74 AESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK----  149 (274)
T ss_pred             HHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc----
Confidence            53       58999999996421    01111   22344688999998888887765311112899999853211    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCe-EEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNF-EMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~i  235 (366)
                                 +......|+.+|.+.+.+.+.++.++   |+++..+.++.+...+.......... ...........+.
T Consensus       150 -----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~  218 (274)
T PRK08415        150 -----------YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNV  218 (274)
T ss_pred             -----------CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccC
Confidence                       11124579999999999999988764   67777776655432221110000000 0000001112356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+|+++++..++...    .++.+.+.+|.
T Consensus       219 ~pedva~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        219 SIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             CHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence            7899999999998642    46777777664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=1.8e-13  Score=132.91  Aligned_cols=213  Identities=14%  Similarity=0.044  Sum_probs=138.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-c--cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-M--EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~--~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++++||||+|.||.++++.|.++|++         |+++++...... .  ....+..++.+|+++.+++.++++   
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~---------vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAH---------VVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE---------EEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999         999987543211 1  112234688999999988777653   


Q ss_pred             ----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcCC----CceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNGV----MSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~~----~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|+|||+||........   .......+.+|+.++.++.+++.....    .  +||++||...+...       
T Consensus       280 ~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g--~iv~~SS~~~~~g~-------  350 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG--RIVGVSSISGIAGN-------  350 (450)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC--EEEEECChhhcCCC-------
Confidence                589999999975422111   122344588999999999999876422    4  89999996543211       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                              .....|+.+|...+.+++.++.+   .++.+..+.++.+..-+..... ...-.............-.+|++
T Consensus       351 --------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~-~~~~~~~~~~~~l~~~~~p~dva  421 (450)
T PRK08261        351 --------RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIP-FATREAGRRMNSLQQGGLPVDVA  421 (450)
T ss_pred             --------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccc-hhHHHHHhhcCCcCCCCCHHHHH
Confidence                    12457999999888888887665   3778777765544221111000 00000000000111123468999


Q ss_pred             HHHHHHHhcC----CCCcEEecCC
Q 044498          242 EGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       242 ~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      +++.+++...    .++++.+.++
T Consensus       422 ~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        422 ETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             HHHHHHhChhhcCCCCCEEEECCC
Confidence            9999988643    3677777654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.5e-13  Score=124.32  Aligned_cols=201  Identities=15%  Similarity=0.054  Sum_probs=128.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      |+++||||+|.||.+++++|.++|++         |++++|+.......       ....+.++.+|+++++++.++++ 
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~---------vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAE---------LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD   71 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence            47999999999999999999999999         99998875431111       01113457899999887766543 


Q ss_pred             ------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----c-CCCceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----N-GVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|++||++|.......   ...+....+.+|+.++.++++++..    . ...  ++|++||...+..     
T Consensus        72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g--~ii~isS~~~~~~-----  144 (272)
T PRK07832         72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGG--HLVNVSSAAGLVA-----  144 (272)
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc--EEEEEccccccCC-----
Confidence                  58999999996532111   1122345688999999999998753    2 234  8999999643211     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCeEEec---C-Ccceee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNFEMWG---D-GKQTRS  233 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~---~-~~~~~~  233 (366)
                                ......|+.+|...+.+.+..+.+   .++++++++++.+. .++......+....-..   . ......
T Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (272)
T PRK07832        145 ----------LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGH  214 (272)
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccC
Confidence                      112456999999888877776644   47888888776552 22222110000000000   0 000112


Q ss_pred             eeeHHHHHHHHHHHHhc
Q 044498          234 LTFIDECVEGVLRLIKS  250 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~  250 (366)
                      .+..+|+|++++.+++.
T Consensus       215 ~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        215 AVTPEKAAEKILAGVEK  231 (272)
T ss_pred             CCCHHHHHHHHHHHHhc
Confidence            46788888888888864

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.2e-13  Score=123.48  Aligned_cols=222  Identities=14%  Similarity=0.087  Sum_probs=138.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++.++|||| |+||++++++|. +|++         |++++|+......      .....+.++.+|++|.+++.++++ 
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~---------Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~   70 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKK---------VLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAAT   70 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence            467899997 799999999996 7999         9999987542211      112246789999999988877653 


Q ss_pred             -----CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCC-C----CCC-
Q 044498           96 -----GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFK-Q----LDT-  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~-~----~~~-  162 (366)
                           .+|++||+||...    ...+....+++|+.++.++++++...  .-.  ++|++||........ .    ... 
T Consensus        71 ~~~~g~id~li~nAG~~~----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g--~iv~isS~~~~~~~~~~~~~~~~~~  144 (275)
T PRK06940         71 AQTLGPVTGLVHTAGVSP----SQASPEAILKVDLYGTALVLEEFGKVIAPGG--AGVVIASQSGHRLPALTAEQERALA  144 (275)
T ss_pred             HHhcCCCCEEEECCCcCC----chhhHHHHHHHhhHHHHHHHHHHHHHHhhCC--CEEEEEecccccCcccchhhhcccc
Confidence                 5899999999642    23456778999999999999988754  112  567777754321110 0    000 


Q ss_pred             CcccccC--CC-------CCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCC-C-e-EEec
Q 044498          163 DVKESEA--WP-------AEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTD-N-F-EMWG  226 (366)
Q Consensus       163 ~~~e~~~--~~-------~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~-~-~-~i~~  226 (366)
                      .++.++.  .+       ..+...|+.+|++.+.+.+.++.++   ++++..+.++.+ ..+......... . . .+. 
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~-  223 (275)
T PRK06940        145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMF-  223 (275)
T ss_pred             ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHh-
Confidence            0000000  00       0235679999999999988887765   677777765543 111111110000 0 0 000 


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .......+...+|+|+++..++...    .++++.+.+|.
T Consensus       224 ~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        224 AKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             hhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            0011223677899999999988542    46777777664

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.53  E-value=5.6e-13  Score=119.62  Aligned_cols=216  Identities=12%  Similarity=0.045  Sum_probs=136.8

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--cc---c--ccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MM---E--DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~---~--~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +.++++||||+  +-||.+++++|.++|++         |++.+|.....  ..   .  ....+.++.+|++|++++.+
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   76 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK---------LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITA   76 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCE---------EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHH
Confidence            45789999997  89999999999999999         99887653211  10   0  12346788999999988776


Q ss_pred             hhc-------CCCEEEEcccccCC----ccccccCc---chhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGG----MGFIQSNH---SVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~----~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +++       ++|++||+||....    ......+.   ...+++|+.+...+.+++...=.+..++|++||....  . 
T Consensus        77 ~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~--~-  153 (257)
T PRK08594         77 CFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE--R-  153 (257)
T ss_pred             HHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc--c-
Confidence            653       58999999996431    01111222   2346788888887777766532111289999985321  1 


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCC-eEEecCCcceeee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDN-FEMWGDGKQTRSL  234 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~  234 (366)
                                  +......|+.+|++.+.+.+.++.++   ++++..+.++.+..-+......... ............+
T Consensus       154 ------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~  221 (257)
T PRK08594        154 ------------VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRT  221 (257)
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCcccc
Confidence                        11124579999999999999888765   6888888666542211111100000 0000000112235


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ...+|+++++..++...    .++.+.+.+|
T Consensus       222 ~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        222 TTQEEVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             CCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence            67899999999998653    4666776655

>PRK05855 short chain dehydrogenase; Validated

Probab=99.52  E-value=1.5e-13  Score=137.53  Aligned_cols=161  Identities=17%  Similarity=0.057  Sum_probs=120.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|.++|++         |++++|+......      .....+.++.+|+++++++.++++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  384 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAE---------VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAE  384 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            5689999999999999999999999999         9999987543211      112246889999999998877654


Q ss_pred             -------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .+|++||+||.........   .+....+++|+.++.++++++..    .+ ..  +||++||.+.|...   
T Consensus       385 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g--~iv~~sS~~~~~~~---  459 (582)
T PRK05855        385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGG--HIVNVASAAAYAPS---  459 (582)
T ss_pred             HHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc--EEEEECChhhccCC---
Confidence                   4899999999764322222   22344578999999888887643    33 23  89999998766532   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP  208 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~  208 (366)
                                  .+...|+.+|++.+.+.+.++.++   |++++.+.++.+
T Consensus       460 ------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v  498 (582)
T PRK05855        460 ------------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFV  498 (582)
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCC
Confidence                        234679999999999888877654   788888876655

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.52  E-value=1.3e-12  Score=115.45  Aligned_cols=204  Identities=12%  Similarity=0.057  Sum_probs=128.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh---cCCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT---SGVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~---~~~d~v  100 (366)
                      |+|+||||+|+||++++++|+++|..       ..|....|......  ....+.++.+|+++.+++.++.   .++|++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~-------~~v~~~~~~~~~~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPD-------ATVHATYRHHKPDF--QHDNVQWHALDVTDEAEIKQLSEQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCC-------CEEEEEccCCcccc--ccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            58999999999999999999998633       00555555443321  1234678999999998776643   479999


Q ss_pred             EEcccccCCcc------ccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498          101 SNLAADMGGMG------FIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus       101 i~~a~~~~~~~------~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      ||+||......      ....+   ....+.+|+.+...+.+.+..    .+..  +++++||..  |.....       
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~--~i~~iss~~--~~~~~~-------  140 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESA--KFAVISAKV--GSISDN-------  140 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCc--eEEEEeecc--cccccC-------
Confidence            99999764210      01111   123577888888777776654    3345  799998732  211100       


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                         +..+...|+.+|+..+.+.+.++.+.     ++.+..+.++.+ ..+......          ......+...+|++
T Consensus       141 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~~~a  207 (235)
T PRK09009        141 ---RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ----------NVPKGKLFTPEYVA  207 (235)
T ss_pred             ---CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh----------ccccCCCCCHHHHH
Confidence               12245679999999999999888663     566665655433 111111110          01112356899999


Q ss_pred             HHHHHHHhcC----CCCcEEecC
Q 044498          242 EGVLRLIKSD----FREPLNIGS  260 (366)
Q Consensus       242 ~~~~~~l~~~----~~~~~~i~~  260 (366)
                      +++..++...    .+..+.+.+
T Consensus       208 ~~~~~l~~~~~~~~~g~~~~~~g  230 (235)
T PRK09009        208 QCLLGIIANATPAQSGSFLAYDG  230 (235)
T ss_pred             HHHHHHHHcCChhhCCcEEeeCC
Confidence            9999999764    344454443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=3.4e-13  Score=121.12  Aligned_cols=215  Identities=15%  Similarity=0.047  Sum_probs=136.6

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--cc---cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MM---EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~---~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||+  +-||.+++++|+++|++         |++.+|+....  ..   .....+.++.+|+++.+++.+++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~---------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAE---------LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCE---------EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHH
Confidence            56789999998  59999999999999999         99888864321  01   11112357889999998877654


Q ss_pred             c-------CCCEEEEcccccCCc----c---ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGM----G---FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~----~---~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++|||||.....    .   ....+....+++|+.+...+.+++...=.+..++|++||....   .  
T Consensus        80 ~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~---~--  154 (258)
T PRK07533         80 ARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE---K--  154 (258)
T ss_pred             HHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc---c--
Confidence            2       589999999964310    0   1112234568899999998888775531111279999985321   0  


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~i  235 (366)
                                +......|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+...... .... .-.........+.
T Consensus       155 ----------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~  223 (258)
T PRK07533        155 ----------VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD-FDALLEDAAERAPLRRLV  223 (258)
T ss_pred             ----------CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC-cHHHHHHHHhcCCcCCCC
Confidence                      11224579999999999998887764   677777765543 222111000 0000 0000001112356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+|++.++..++...    .++.+.+.++
T Consensus       224 ~p~dva~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        224 DIDDVGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             CHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence            7899999999998652    4566666554

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=4.1e-13  Score=121.51  Aligned_cols=217  Identities=12%  Similarity=0.017  Sum_probs=139.5

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc--cccc---cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN--EHMM---EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~--~~~~---~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+  +-||.+++++|.++|++         |++..|...  +...   ........+.+|+++++++.+++
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~---------V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   79 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAE---------LAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVF   79 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCE---------EEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHH
Confidence            45789999997  89999999999999999         988776531  1111   11112457899999998887765


Q ss_pred             c-------CCCEEEEcccccCCc----cc---cccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGM----GF---IQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~----~~---~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       .+|++||+||.....    ..   ...+....+++|+.++..+++++...=.++.++|++||.....     
T Consensus        80 ~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-----  154 (272)
T PRK08159         80 ETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-----  154 (272)
T ss_pred             HHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-----
Confidence            3       589999999965310    01   1122345588999999999988765411112899999853211     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCe-EEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNF-EMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~i~  236 (366)
                                +......|+.+|...+.+.+.++.++   ++++..+.++.+...+.......... ...........+..
T Consensus       155 ----------~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~  224 (272)
T PRK08159        155 ----------VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVT  224 (272)
T ss_pred             ----------CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCC
Confidence                      11224579999999999999888775   67777776655432221111000000 00000011123567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+|+|++++.++...    .++++.+.+|.
T Consensus       225 peevA~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        225 IEEVGDSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHHHHHHHHHhCccccCccceEEEECCCc
Confidence            899999999999653    46777777764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.51  E-value=3.9e-13  Score=120.70  Aligned_cols=214  Identities=12%  Similarity=0.032  Sum_probs=136.8

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-----c---ccccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-----M---MEDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-----~---~~~~~~v~~~~~D~~~~~~l~   91 (366)
                      ++++++||||+  +-||.+++++|.++|++         |++..|.....     .   ......+.++.+|++|++++.
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~   75 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE---------LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIE   75 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCE---------EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHH
Confidence            45789999986  79999999999999999         88776543211     0   001112468899999998887


Q ss_pred             hhhc-------CCCEEEEcccccCC----ccccc---cCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccC
Q 044498           92 RMTS-------GVDNMSNLAADMGG----MGFIQ---SNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYP  155 (366)
Q Consensus        92 ~~~~-------~~d~vi~~a~~~~~----~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg  155 (366)
                      ++++       ++|++||+||....    .....   .+....+++|+.+...+.+++.+.  .-.  ++|++||..-. 
T Consensus        76 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g--~Iv~isS~~~~-  152 (258)
T PRK07370         76 ETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG--SIVTLTYLGGV-  152 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC--eEEEEeccccc-
Confidence            6653       58999999996531    11111   123445788999988888776542  123  89999995321 


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCC-CCeEEecCCcce
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTST-DNFEMWGDGKQT  231 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~-~~~~i~~~~~~~  231 (366)
                       .             +......|+.+|.+.+.+.+.++.++   ++++..+.++.+..-+....... ....-.......
T Consensus       153 -~-------------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  218 (258)
T PRK07370        153 -R-------------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL  218 (258)
T ss_pred             -c-------------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc
Confidence             1             11234579999999999999998876   57777776654422111100000 000000011112


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+...+|++.++..++...    .++++.+.+|
T Consensus       219 ~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        219 RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             CcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence            23567899999999998643    4666777655

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=2.3e-13  Score=123.05  Aligned_cols=215  Identities=13%  Similarity=0.048  Sum_probs=136.2

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--ccc--cc-ccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MME--DM-FCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~~--~~-~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++.+|||||++  .||.+++++|.++|++         |++.+|+....  ...  .. .....+.+|++|.+++.+++
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~---------V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~   76 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE---------LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVF   76 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE---------EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHH
Confidence            457899999997  9999999999999999         99888764211  000  11 11246889999998877665


Q ss_pred             c-------CCCEEEEcccccCCc----cc---cccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCC
Q 044498           95 S-------GVDNMSNLAADMGGM----GF---IQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~----~~---~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +       .+|++||+||.....    ..   ...+....+.+|+.+..++++++...  .-.  ++|++||.....   
T Consensus        77 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G--~Iv~isS~~~~~---  151 (271)
T PRK06505         77 EALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG--SMLTLTYGGSTR---  151 (271)
T ss_pred             HHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc--eEEEEcCCCccc---
Confidence            3       589999999965310    11   11223445788999988888776542  113  799999864211   


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCC-eEEecCCcceeee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDN-FEMWGDGKQTRSL  234 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~  234 (366)
                                  +......|+.+|.+.+.+.+.++.++   |+++..+.++.+..-+......... ............+
T Consensus       152 ------------~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~  219 (271)
T PRK06505        152 ------------VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRT  219 (271)
T ss_pred             ------------cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCcccc
Confidence                        11124579999999999999988875   6777777655442111000000000 0000000011224


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+|++++++.++...    .++.+.+.+|.
T Consensus       220 ~~peeva~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        220 VTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             CCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence            57899999999998643    46677776654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=4.5e-13  Score=120.52  Aligned_cols=215  Identities=12%  Similarity=0.045  Sum_probs=135.7

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc--ccc---ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKN--EHM---MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~--~~~---~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||++  -||.++++.|+++|++         |++.+|+..  ...   ......+.++.+|++|++++.+++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~---------vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   75 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAE---------LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMF   75 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCE---------EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHH
Confidence            457899999985  8999999999999999         988887631  111   111123467889999999888765


Q ss_pred             c-------CCCEEEEcccccCCcc-----c---cccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG-----F---IQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~-----~---~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~  157 (366)
                      +       .+|++||+||......     .   ...+....+++|+.+...+.+++...  .-.  ++|++||.....  
T Consensus        76 ~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g--~Iv~iss~~~~~--  151 (262)
T PRK07984         76 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGS--ALLTLSYLGAER--  151 (262)
T ss_pred             HHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCc--EEEEEecCCCCC--
Confidence            3       5899999999642111     0   11122344678988887777776542  123  799999854211  


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCe-EEecCCcceee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNF-EMWGDGKQTRS  233 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~  233 (366)
                                   +......|+.+|.+.+.+.+.++.++   ++++..+.++.+...+.......... .-.........
T Consensus       152 -------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r  218 (262)
T PRK07984        152 -------------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR  218 (262)
T ss_pred             -------------CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcC
Confidence                         11124579999999999999988874   67777776554422221100000000 00000011223


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +...+|++.++..++...    .++.+.+.++.
T Consensus       219 ~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        219 TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            567899999999998653    45667766553

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=3.3e-13  Score=121.43  Aligned_cols=214  Identities=11%  Similarity=0.019  Sum_probs=133.9

Q ss_pred             CCCeEEEEcC--CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--c-c--cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGV--GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--M-M--EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~-~--~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||  ++.||.+++++|+++|++         |++..|.....  . .  ........+.+|+++.+++.+++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAE---------LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVF   75 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCE---------EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHH
Confidence            4578999997  679999999999999999         88876642211  0 0  01112357899999999887765


Q ss_pred             c-------CCCEEEEcccccCCcc----ccc-cC---cchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCC
Q 044498           95 S-------GVDNMSNLAADMGGMG----FIQ-SN---HSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~----~~~-~~---~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~  156 (366)
                      +       ++|++|||||......    ... .+   ....+++|+.+...+.+++...   +..  ++|++||...+. 
T Consensus        76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g--~Iv~iss~~~~~-  152 (261)
T PRK08690         76 ADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNS--AIVALSYLGAVR-  152 (261)
T ss_pred             HHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCc--EEEEEccccccc-
Confidence            3       5899999999753210    011 11   2233677888877777665432   223  799999864321 


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-HHHHHHhCCCCe-EEecCCcce
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-FSRKAVTSTDNF-EMWGDGKQT  231 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~~~~~~~~~~~~-~i~~~~~~~  231 (366)
                                    +......|+.+|...+.+.+.++.+   +++++..+.++.+.. +...... .... .........
T Consensus       153 --------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~  217 (261)
T PRK08690        153 --------------AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD-FGKLLGHVAAHNPL  217 (261)
T ss_pred             --------------CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc-hHHHHHHHhhcCCC
Confidence                          1122457999999999988887665   377777776554422 1111000 0000 000011112


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+...+|+|+++..++...    .++++.+.+|.
T Consensus       218 ~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        218 RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            33677999999999999753    46677776654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.50  E-value=6e-13  Score=122.96  Aligned_cols=175  Identities=12%  Similarity=0.001  Sum_probs=116.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT-   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~-   94 (366)
                      +++++||||++.||.+++++|+++| ++         |++++|+......      .....+.++.+|+++.+++.+++ 
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~---------V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   73 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWH---------VIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQ   73 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCE---------EEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHH
Confidence            5689999999999999999999999 99         9999887543211      11224578889999998877654 


Q ss_pred             ------cCCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHHH----cC--CCceeEEEEecccccCCCC
Q 044498           95 ------SGVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAARM----NG--VMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        95 ------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~~r~I~~SS~~vyg~~~  158 (366)
                            .++|++||+||......    ....+.+..+.+|+.+...+.+++..    .+  ..  |+|++||...+....
T Consensus        74 ~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g--~IV~vsS~~~~~~~~  151 (314)
T TIGR01289        74 QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDK--RLIIVGSITGNTNTL  151 (314)
T ss_pred             HHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCC--eEEEEecCccccccC
Confidence                  25899999999643211    11122344588999997777655543    32  34  899999986653211


Q ss_pred             C----CCCCcc--------------cccCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcH
Q 044498          159 Q----LDTDVK--------------ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAP  208 (366)
Q Consensus       159 ~----~~~~~~--------------e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~  208 (366)
                      .    .+..+.              ..+..+..+...|+.||++...+...+++++    ++.++.+.++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  223 (314)
T TIGR01289       152 AGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCI  223 (314)
T ss_pred             CCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcc
Confidence            0    000000              0011133466789999999888888777653    577777766644

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=1.2e-12  Score=117.36  Aligned_cols=215  Identities=13%  Similarity=0.092  Sum_probs=135.6

Q ss_pred             CCCeEEEEcC--CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-cc----cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGV--GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-MM----EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~~----~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||  ++.||.+++++|.++|++         |++.+|+.... ..    .....+.++.+|+++++++.+++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~---------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~   76 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAE---------VVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLA   76 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCE---------EEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHH
Confidence            4578999999  899999999999999999         99988754211 11    01124578999999998877664


Q ss_pred             c-------CCCEEEEcccccCC----ccccccCc---chhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGG----MGFIQSNH---SVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~----~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||....    ......+.   ...+++|+.+...+.+++...=.+..++|++|+....      
T Consensus        77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~------  150 (256)
T PRK07889         77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV------  150 (256)
T ss_pred             HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc------
Confidence            2       58999999997521    01112222   3347899999888887776431111278888763210      


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCe-EEecCCccee-eee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNF-EMWGDGKQTR-SLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~-~i~~~~~~~~-~~i  235 (366)
                                .......|+.+|+..+.+.+.++.++   |+++..+.++.+..-+.......... ..+....... .+.
T Consensus       151 ----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~  220 (256)
T PRK07889        151 ----------AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVK  220 (256)
T ss_pred             ----------cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccC
Confidence                      11124568999999999998887764   67777776654422111110000000 0000000111 356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+|+|+++..++...    .++++.+.++
T Consensus       221 ~p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        221 DPTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             CHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            7999999999998653    4566666554

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=8.9e-13  Score=118.54  Aligned_cols=216  Identities=12%  Similarity=0.045  Sum_probs=135.5

Q ss_pred             CCCeEEEEcC--CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc--cccc---cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGV--GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN--EHMM---EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~--~~~~---~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +.++++||||  ++-||.+++++|+++|++         |++.+|...  +...   ........+.+|++|++++.+++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   75 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAE---------LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALF   75 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe---------EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHH
Confidence            4578999996  679999999999999999         888765321  1110   11112246889999999887765


Q ss_pred             c-------CCCEEEEcccccCCcc--------ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG--------FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       ++|++||+||......        ....+....+++|+.+...+.+++.+.=.+..++|++||....  .  
T Consensus        76 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~--~--  151 (260)
T PRK06997         76 ASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE--R--  151 (260)
T ss_pred             HHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc--c--
Confidence            3       5899999999753210        1111233457899999988888876531111289999985421  1  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCe-EEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNF-EMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~i  235 (366)
                                 +......|+.+|...+.+.+.++.++   ++++..+.++.+...+.......... ...........+.
T Consensus       152 -----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~  220 (260)
T PRK06997        152 -----------VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNV  220 (260)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccC
Confidence                       11124569999999999999988865   67777775554422111100000000 0000001122356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+|+++++..++...    .++++.+.++
T Consensus       221 ~pedva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        221 TIEEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             CHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence            7999999999998653    4566766655

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=9.8e-13  Score=118.27  Aligned_cols=216  Identities=10%  Similarity=0.009  Sum_probs=134.4

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--cc-c-cc-ccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MM-E-DM-FCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~-~-~~-~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++.++||||++  -||.++++.|.++|++         |++.+|+....  .. . .. ....++.+|++|++++.+++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~---------v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~   77 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAE---------LWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLF   77 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCE---------EEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHH
Confidence            457899999997  7999999999999999         98887763211  10 0 11 11235689999998877765


Q ss_pred             c-------CCCEEEEcccccCCc----cccc---cCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGM----GFIQ---SNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~----~~~~---~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+|+.....    ....   .+....+++|+.+...+++++...-.+..++|++||.....     
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-----  152 (260)
T PRK06603         78 DDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-----  152 (260)
T ss_pred             HHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-----
Confidence            3       589999999964310    0111   22344588899998888887654311112899999854321     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCC-eEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDN-FEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~  236 (366)
                                +......|+.+|+..+.+.+.++.++   ++++..+.++.+..-+......... ............+..
T Consensus       153 ----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~  222 (260)
T PRK06603        153 ----------VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTT  222 (260)
T ss_pred             ----------CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCC
Confidence                      11124579999999999999888765   6777777555432111110000000 000000011123567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .+|+++++.+++...    .++.+.+.+|
T Consensus       223 pedva~~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        223 QEDVGGAAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             HHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence            899999999999653    3566776655

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.46  E-value=1.7e-12  Score=109.00  Aligned_cols=155  Identities=10%  Similarity=-0.006  Sum_probs=111.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccc---------cccccceEEEccCCChhHHHhh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMM---------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~---------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++||||+|+||.+++++|.++|. .         |+.++|+......         .....+.++.+|+++.+.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARH---------LVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAA   71 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCe---------EEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            4699999999999999999999986 5         7777776433211         1122456889999998877766


Q ss_pred             hc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc-cCCCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI-YPEFKQLDT  162 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v-yg~~~~~~~  162 (366)
                      ++       .+|++||+++........   ..+....++.|+.++.+++++++..+.+  ++|++||... ++.      
T Consensus        72 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~ii~~ss~~~~~~~------  143 (180)
T smart00822       72 LAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLD--FFVLFSSVAGVLGN------  143 (180)
T ss_pred             HHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcc--eEEEEccHHHhcCC------
Confidence            43       479999999965321111   1233556889999999999999887777  8999998543 221      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK  206 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~  206 (366)
                                .....|+.+|...+.+++.. ...+++++.+.++
T Consensus       144 ----------~~~~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g  176 (180)
T smart00822      144 ----------PGQANYAAANAFLDALAAHR-RARGLPATSINWG  176 (180)
T ss_pred             ----------CCchhhHHHHHHHHHHHHHH-HhcCCceEEEeec
Confidence                      12456999999999988554 4558887766443

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.45  E-value=2.2e-12  Score=127.62  Aligned_cols=213  Identities=14%  Similarity=0.028  Sum_probs=139.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++++||||++.||.+++++|.++|++         |++++|+.......   ....+.++.+|+++++++.++++   
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQ---------VVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLH   74 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99998875532211   12235678999999988777653   


Q ss_pred             ----CCCEEEEcccccCCc-----cccccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGM-----GFIQSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                          ++|++||+||.....     .....+....+++|+.++..+++++...    + ..  ++|++||......     
T Consensus        75 ~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~--~iv~isS~~~~~~-----  147 (520)
T PRK06484         75 REFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGA--AIVNVASGAGLVA-----  147 (520)
T ss_pred             HHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC--eEEEECCcccCCC-----
Confidence                589999999963210     1122234556889999999888887654    2 23  7999999643321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-eEEecCCcceeeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-FEMWGDGKQTRSLTF  236 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~~i~~~~~~~~~~i~  236 (366)
                                ......|+.+|+..+.+.+.++.++   ++++..+.+..+ ..+.......... ............+..
T Consensus       148 ----------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (520)
T PRK06484        148 ----------LPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGR  217 (520)
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcC
Confidence                      1124579999999999998887764   688888866644 2232221110000 000000001122467


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGS  260 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~  260 (366)
                      .+|+++++..++...    .++++.+.+
T Consensus       218 ~~~va~~v~~l~~~~~~~~~G~~~~~~g  245 (520)
T PRK06484        218 PEEIAEAVFFLASDQASYITGSTLVVDG  245 (520)
T ss_pred             HHHHHHHHHHHhCccccCccCceEEecC
Confidence            899999999988642    344444443

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.45  E-value=4.7e-12  Score=112.35  Aligned_cols=197  Identities=15%  Similarity=0.101  Sum_probs=127.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccc-cceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMF-CHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~-~v~~~~~D~~~~~~l~~~   93 (366)
                      +++.|+|||||..||.+++.+|.++|..         ++.+.|...+...       .... .+..+.+|++|.+++.++
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~---------l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~   81 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAK---------LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF   81 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCc---------eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence            7789999999999999999999999998         7766665442111       1111 478999999999988866


Q ss_pred             h-------cCCCEEEEcccccCCcccccc-C---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCC
Q 044498           94 T-------SGVDNMSNLAADMGGMGFIQS-N---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        94 ~-------~~~d~vi~~a~~~~~~~~~~~-~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +       .++|++||+||... ...... +   ....+++|+.|+..+.+++.    +.+-.  |+|.+||..=+-   
T Consensus        82 ~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G--hIVvisSiaG~~---  155 (282)
T KOG1205|consen   82 VEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG--HIVVISSIAGKM---  155 (282)
T ss_pred             HHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC--eEEEEecccccc---
Confidence            4       47999999999875 222222 2   23358899998766666654    44533  899999963221   


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCC---cEE-EeCCCcH-HHHHHHHHhCCCCeEEecCCcceee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEI---ECR-LVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~---~~~-i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                  +......|..||.+.+.+.+.++.++.-   .+. ++-++.+ ..|...... +....     .....
T Consensus       156 ------------~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~~-~~~~~-----~~~~~  217 (282)
T KOG1205|consen  156 ------------PLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKELL-GEEGK-----SQQGP  217 (282)
T ss_pred             ------------CCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchhhc-ccccc-----ccccc
Confidence                        1111338999999999999999888732   222 2434433 444443333 11111     12223


Q ss_pred             eeeHHHHHH--HHHHHHhcC
Q 044498          234 LTFIDECVE--GVLRLIKSD  251 (366)
Q Consensus       234 ~i~v~D~a~--~~~~~l~~~  251 (366)
                      ....+|++.  .+..++..+
T Consensus       218 ~~~~~~~~~~~~~~~~i~~~  237 (282)
T KOG1205|consen  218 FLRTEDVADPEAVAYAISTP  237 (282)
T ss_pred             hhhhhhhhhHHHHHHHHhcC
Confidence            444566654  666666554

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=5.6e-12  Score=110.96  Aligned_cols=201  Identities=15%  Similarity=0.068  Sum_probs=139.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc----cc-ccceEEEccCCChhHHHhhhc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME----DM-FCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~----~~-~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ..++.||||||++.+|+.++.+|.++|..         +.+.+.++....+-    .. -.+..+.+|+++.+++.+..+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~---------~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~  106 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAK---------LVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAK  106 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCe---------EEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHH
Confidence            37789999999999999999999999998         98998876643321    10 136799999999988776543


Q ss_pred             -------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .++++||+||.+........++   +..+++|+.+.....+++    .+.+-.  ++|-++|..-+-      
T Consensus       107 ~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~G--HIV~IaS~aG~~------  178 (300)
T KOG1201|consen  107 KVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNG--HIVTIASVAGLF------  178 (300)
T ss_pred             HHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCc--eEEEehhhhccc------
Confidence                   6999999999987654444433   345889999876655554    444444  899999854221      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc------CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF------EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~------~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                               .......|+.||.++.-+.+.+..+.      ++..+.+.+..+..-   +..+..+.      ......+
T Consensus       179 ---------g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg---mf~~~~~~------~~l~P~L  240 (300)
T KOG1201|consen  179 ---------GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG---MFDGATPF------PTLAPLL  240 (300)
T ss_pred             ---------CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc---ccCCCCCC------ccccCCC
Confidence                     12234569999999988877776543      577777766554311   11111111      1234567


Q ss_pred             eHHHHHHHHHHHHhcCCCCcE
Q 044498          236 FIDECVEGVLRLIKSDFREPL  256 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~~~~~~  256 (366)
                      ..+.+|+.++..+..+..+.+
T Consensus       241 ~p~~va~~Iv~ai~~n~~~~~  261 (300)
T KOG1201|consen  241 EPEYVAKRIVEAILTNQAGLL  261 (300)
T ss_pred             CHHHHHHHHHHHHHcCCcccc
Confidence            899999999999887655443

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.44  E-value=2e-12  Score=119.56  Aligned_cols=163  Identities=10%  Similarity=-0.048  Sum_probs=113.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c--cccceEEEccCCC--hhHHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D--MFCHEFHLVDLRV--MDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~--~~~v~~~~~D~~~--~~~l~   91 (366)
                      .++.++||||||.||.+++++|.++|++         |++++|+.......      .  ...+..+.+|+++  .+.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~---------Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~  122 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLN---------LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVK  122 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCC---------EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHH
Confidence            3578999999999999999999999999         99999976532110      0  1235677889885  23333


Q ss_pred             ---hhhcC--CCEEEEcccccCCc--ccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCC
Q 044498           92 ---RMTSG--VDNMSNLAADMGGM--GFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        92 ---~~~~~--~d~vi~~a~~~~~~--~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~  157 (366)
                         +.+.+  +|++||+||.....  .....   +....+++|+.++..+.+++..    .+..  ++|++||...+...
T Consensus       123 ~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g--~IV~iSS~a~~~~~  200 (320)
T PLN02780        123 RIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKG--AIINIGSGAAIVIP  200 (320)
T ss_pred             HHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCc--EEEEEechhhccCC
Confidence               33333  56999999975321  11112   2234688999998888887653    4555  89999997543210


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP  208 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~  208 (366)
                       .            ......|+.+|+..+.+.+.++.++   |+++..+.++.+
T Consensus       201 -~------------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v  241 (320)
T PLN02780        201 -S------------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYV  241 (320)
T ss_pred             -C------------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCce
Confidence             0            0124679999999999999988775   688888866654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.43  E-value=1.3e-12  Score=117.23  Aligned_cols=200  Identities=14%  Similarity=0.060  Sum_probs=128.9

Q ss_pred             eEEEEcCCCchhHHHHHHHHH----cCCCCCCCCCccEEEEEeCCCccccc------c--ccccceEEEccCCChhHHHh
Q 044498           25 RISSIGVGGFIPSNIARRLKS----ERHYSTSIPNALYIIASDWNKNEHMM------E--DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~----~g~~~~~~~~~~~V~~~~r~~~~~~~------~--~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .++||||+|.||.+++++|.+    .|++         |++++|+......      .  ....+.++.+|+++.+++.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~   72 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSV---------LVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQ   72 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcE---------EEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHH
Confidence            589999999999999999997    6888         9999887543211      0  12246789999999988776


Q ss_pred             hhcC-----------CCEEEEcccccCCccc-c-----ccCcchhhhhhHHHHHHHHHHHHHc-----C-CCceeEEEEe
Q 044498           93 MTSG-----------VDNMSNLAADMGGMGF-I-----QSNHSVIMYKNTTISFDMLEAARMN-----G-VMSLTFFFVS  149 (366)
Q Consensus        93 ~~~~-----------~d~vi~~a~~~~~~~~-~-----~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~~r~I~~S  149 (366)
                      +++.           .|++||+||....... .     ..+....+++|+.++..+.+++.+.     + ..  ++|++|
T Consensus        73 ~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~--~iv~is  150 (256)
T TIGR01500        73 LLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNR--TVVNIS  150 (256)
T ss_pred             HHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCC--EEEEEC
Confidence            5531           2599999996432111 1     1123456889999987777665432     2 23  799999


Q ss_pred             cccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEe
Q 044498          150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       150 S~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~  225 (366)
                      |...+.               +......|+.+|...+.+.+.++.++   ++.+..+.++.+ ..+..............
T Consensus       151 S~~~~~---------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  215 (256)
T TIGR01500       151 SLCAIQ---------------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMR  215 (256)
T ss_pred             CHHhCC---------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHH
Confidence            965432               11234579999999999999987774   577777766544 22322222100000000


Q ss_pred             ---cCCcceeeeeeHHHHHHHHHHHHhc
Q 044498          226 ---GDGKQTRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       226 ---~~~~~~~~~i~v~D~a~~~~~~l~~  250 (366)
                         ........+...+|+|+.++.++..
T Consensus       216 ~~~~~~~~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       216 KGLQELKAKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHhc
Confidence               0000112356789999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.43  E-value=1.1e-12  Score=109.48  Aligned_cols=146  Identities=16%  Similarity=0.080  Sum_probs=109.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCC--Cccc------cccccccceEEEccCCChhHHHhhh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWN--KNEH------MMEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~--~~~~------~~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      |+++||||+|-||.+++++|+++|. .         |+++.|+  ....      .......+.++.+|+++.+++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~---------v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~   71 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARV---------VILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALI   71 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEE---------EEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceE---------EEEeeecccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999999999999954 5         7888887  1211      1112356789999999998877765


Q ss_pred             c-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                      +       .+|++||++|..........   .....+.+|+.+...+.+++...+..  ++|++||....-         
T Consensus        72 ~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g--~iv~~sS~~~~~---------  140 (167)
T PF00106_consen   72 EEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGG--KIVNISSIAGVR---------  140 (167)
T ss_dssp             HHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTE--EEEEEEEGGGTS---------
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheecccc--ceEEecchhhcc---------
Confidence            3       68999999998763222222   22345889999999999999885544  899999965432         


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD  195 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~  195 (366)
                            +......|+.+|...+.+.+.++.+
T Consensus       141 ------~~~~~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  141 ------GSPGMSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             ------SSTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCCCChhHHHHHHHHHHHHHHHHHh
Confidence                  1223457999999999999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.4e-11  Score=113.15  Aligned_cols=205  Identities=9%  Similarity=-0.059  Sum_probs=129.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc---------ccc-------cccccceEEEccCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE---------HMM-------EDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~---------~~~-------~~~~~v~~~~~D~~   85 (366)
                      ++++++||||++.||.+++++|++.|++         |++++|+...         ...       .....+.++.+|++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~---------Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~   77 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGAT---------VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHL   77 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCC
Confidence            4578999999999999999999999999         9999887421         000       01123567899999


Q ss_pred             ChhHHHhhhc-------CCCEEEEcc-cccCC----ccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEE
Q 044498           86 VMDNCLRMTS-------GVDNMSNLA-ADMGG----MGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFF  146 (366)
Q Consensus        86 ~~~~l~~~~~-------~~d~vi~~a-~~~~~----~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I  146 (366)
                      +++++.++++       ++|++||+| |....    ......+   ....+.+|+.+...+.+++..    .+-.  ++|
T Consensus        78 ~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g--~IV  155 (305)
T PRK08303         78 VPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG--LVV  155 (305)
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc--EEE
Confidence            9988776653       589999999 63210    1111111   233467888887777666654    2334  899


Q ss_pred             EEecccc-cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh-CCC
Q 044498          147 FVSSACI-YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT-STD  220 (366)
Q Consensus       147 ~~SS~~v-yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~-~~~  220 (366)
                      ++||... ++..             +......|+.+|.....+.+.++.++   ++++..+.++.+ ..+...... ...
T Consensus       156 ~isS~~~~~~~~-------------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~  222 (305)
T PRK08303        156 EITDGTAEYNAT-------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEE  222 (305)
T ss_pred             EECCccccccCc-------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCcc
Confidence            9998532 2110             11124569999999999998887765   677777766644 333222211 000


Q ss_pred             Ce-EEecCCcc-eeeeeeHHHHHHHHHHHHhcC
Q 044498          221 NF-EMWGDGKQ-TRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       221 ~~-~i~~~~~~-~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      .. ..... .. ..-+...+|++.+++.++...
T Consensus       223 ~~~~~~~~-~p~~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        223 NWRDALAK-EPHFAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             chhhhhcc-ccccccCCCHHHHHHHHHHHHcCc
Confidence            00 00000 01 112346899999999998654

>PRK05599 hypothetical protein; Provisional

Probab=99.41  E-value=1.9e-11  Score=108.99  Aligned_cols=197  Identities=13%  Similarity=0.089  Sum_probs=127.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------cc-ccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DM-FCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~-~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      |.++||||++.||.+++++|. +|++         |++++|+..+....      .. ..+.++.+|++|.+++.++++ 
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~---------Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~   70 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGED---------VVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ   70 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCE---------EEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence            579999999999999999998 5998         99998875432111      11 135788999999988776542 


Q ss_pred             ------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHH----HHHcC-CCceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEA----ARMNG-VMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a----~~~~~-~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|++||+||..........+.   .....+|+.+...++.+    +.+.+ ..  ++|++||..-+-      
T Consensus        71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g--~Iv~isS~~~~~------  142 (246)
T PRK05599         71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPA--AIVAFSSIAGWR------  142 (246)
T ss_pred             HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCC--EEEEEecccccc------
Confidence                  5899999999754221111222   22355677766555443    44333 24  899999964321      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                               +......|+.+|...+.+.+.++.++   ++++..+.++.+..-+.   .+..+     .+    -....+
T Consensus       143 ---------~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~---~~~~~-----~~----~~~~pe  201 (246)
T PRK05599        143 ---------ARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT---TGMKP-----AP----MSVYPR  201 (246)
T ss_pred             ---------CCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh---cCCCC-----CC----CCCCHH
Confidence                     11224579999999999998888764   57777776655422111   11111     00    014689


Q ss_pred             HHHHHHHHHHhcCC-CCcEEec
Q 044498          239 ECVEGVLRLIKSDF-REPLNIG  259 (366)
Q Consensus       239 D~a~~~~~~l~~~~-~~~~~i~  259 (366)
                      |+|++++.++.... .+.+.+.
T Consensus       202 ~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        202 DVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             HHHHHHHHHHhcCCCCceEEeC
Confidence            99999999998753 3445544

>PLN00015 protochlorophyllide reductase

Probab=99.33  E-value=2e-11  Score=112.51  Aligned_cols=171  Identities=10%  Similarity=-0.027  Sum_probs=111.3

Q ss_pred             EEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc----
Q 044498           27 SSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        27 lItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      +||||++.||.+++++|+++| ++         |++.+|+......      .....+.++.+|+++.+++.++++    
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   71 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWH---------VVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRR   71 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCE---------EEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence            699999999999999999999 88         9998887543211      112245778999999988776653    


Q ss_pred             ---CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHH----HcC--CCceeEEEEecccccCCCC---C
Q 044498           96 ---GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAAR----MNG--VMSLTFFFVSSACIYPEFK---Q  159 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~--~~~~r~I~~SS~~vyg~~~---~  159 (366)
                         ++|++||+||...... .   ...+....+.+|+.+...+++++.    +.+  ..  ++|++||...+-...   .
T Consensus        72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g--~IV~vsS~~~~~~~~~~~~  149 (308)
T PLN00015         72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSK--RLIIVGSITGNTNTLAGNV  149 (308)
T ss_pred             cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCC--EEEEEeccccccccccccC
Confidence               5899999999753211 1   112334568899999777765544    333  34  899999975431100   0


Q ss_pred             CC---CC--------cccc------cCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcH
Q 044498          160 LD---TD--------VKES------EAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAP  208 (366)
Q Consensus       160 ~~---~~--------~~e~------~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~  208 (366)
                      .+   ..        ..+.      ......+...|+.||++...+.+.+++++    ++.+..+.++.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  219 (308)
T PLN00015        150 PPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCI  219 (308)
T ss_pred             CCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcc
Confidence            00   00        0000      00122356779999999777777777654    577777777655

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.31  E-value=1.2e-10  Score=108.01  Aligned_cols=203  Identities=12%  Similarity=0.031  Sum_probs=123.5

Q ss_pred             CCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHH
Q 044498           16 ESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        16 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l   90 (366)
                      ....|..++.|||+||||.+|+.+++.|+++|+.         |+++.|........     ...+...+..+.....+.
T Consensus        72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~---------vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~  142 (411)
T KOG1203|consen   72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFS---------VRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDI  142 (411)
T ss_pred             CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCe---------eeeeccChhhhhhhhcccccccccceeeeccccccch
Confidence            3344456788999999999999999999999999         99999887654332     223345555555544333


Q ss_pred             Hh-hhc----CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           91 LR-MTS----GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        91 ~~-~~~----~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                      .. +..    ...+++-+++-.+.    ..+...-..+.-.+++|+++||+..|++  |||++|++.   ......    
T Consensus       143 ~~~~~~~~~~~~~~v~~~~ggrp~----~ed~~~p~~VD~~g~knlvdA~~~aGvk--~~vlv~si~---~~~~~~----  209 (411)
T KOG1203|consen  143 LKKLVEAVPKGVVIVIKGAGGRPE----EEDIVTPEKVDYEGTKNLVDACKKAGVK--RVVLVGSIG---GTKFNQ----  209 (411)
T ss_pred             hhhhhhhccccceeEEecccCCCC----cccCCCcceecHHHHHHHHHHHHHhCCc--eEEEEEeec---CcccCC----
Confidence            32 222    24466666663321    1122333456788999999999999999  999998853   222111    


Q ss_pred             cccCCCCCC---CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHH---hCCCCeEEecCCcceeeeeeHHH
Q 044498          166 ESEAWPAEP---QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAV---TSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       166 e~~~~~~~p---~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                           ++..   ...+-..|+.+|.++.    +.+++++|+|+...........   ....+.....++.  --.+.-.|
T Consensus       210 -----~~~~~~~~~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~r~~  278 (411)
T KOG1203|consen  210 -----PPNILLLNGLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGG--AYSISRLD  278 (411)
T ss_pred             -----CchhhhhhhhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcceecccCcccccccccc--ceeeehhh
Confidence                 1111   2233466667776554    5599999998765422111000   0011111111111  12567789


Q ss_pred             HHHHHHHHHhcC
Q 044498          240 CVEGVLRLIKSD  251 (366)
Q Consensus       240 ~a~~~~~~l~~~  251 (366)
                      +|+.++.++.++
T Consensus       279 vael~~~all~~  290 (411)
T KOG1203|consen  279 VAELVAKALLNE  290 (411)
T ss_pred             HHHHHHHHHhhh
Confidence            999999988765

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.30  E-value=1.4e-10  Score=102.07  Aligned_cols=158  Identities=9%  Similarity=-0.043  Sum_probs=107.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT-   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~-   94 (366)
                      .+++++||||++-||.+++++|.++|++         |++++|+......      .....+..+.+|+.+.+++.+++ 
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~---------V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~   74 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGAT---------LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFD   74 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999887653211      11223567889999998877654 


Q ss_pred             ------c-CCCEEEEcccccCCcccc-ccCcch---hhhhhHHHHHHHHHH----HHHcC-CCceeEEEEecccccCCCC
Q 044498           95 ------S-GVDNMSNLAADMGGMGFI-QSNHSV---IMYKNTTISFDMLEA----ARMNG-VMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        95 ------~-~~d~vi~~a~~~~~~~~~-~~~~~~---~~~~nv~~~~~ll~a----~~~~~-~~~~r~I~~SS~~vyg~~~  158 (366)
                            . ++|++||+||........ ..+.+.   .+..|+.+...++++    +++.+ ..  ++|++||...+    
T Consensus        75 ~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g--~Iv~isS~~~~----  148 (227)
T PRK08862         75 AIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKG--VIVNVISHDDH----  148 (227)
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc--eEEEEecCCCC----
Confidence                  3 689999999854322111 222222   345566665555443    33333 33  79999984321    


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP  208 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~  208 (366)
                                    .+...|+.+|...+.+.+.++.++   ++++..+.++.+
T Consensus       149 --------------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i  187 (227)
T PRK08862        149 --------------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIF  187 (227)
T ss_pred             --------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcC
Confidence                          123469999999999998887764   677777765543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.29  E-value=2.5e-11  Score=107.86  Aligned_cols=200  Identities=16%  Similarity=0.021  Sum_probs=130.1

Q ss_pred             HHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc----CCCEEEEcccccCCccccc
Q 044498           39 IARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS----GVDNMSNLAADMGGMGFIQ  114 (366)
Q Consensus        39 l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~----~~d~vi~~a~~~~~~~~~~  114 (366)
                      +++.|+++|++         |++++|+.....     ...++.+|+++.+++.++++    ++|++||+||...     .
T Consensus         1 ~a~~l~~~G~~---------Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~-----~   61 (241)
T PRK12428          1 TARLLRFLGAR---------VIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-----T   61 (241)
T ss_pred             ChHHHHhCCCE---------EEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC-----C
Confidence            46789999999         999998765421     13678999999998888765    5899999999642     2


Q ss_pred             cCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCcccc-------c-------CCCCCCCCch
Q 044498          115 SNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVKES-------E-------AWPAEPQDAY  178 (366)
Q Consensus       115 ~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~e~-------~-------~~~~~p~~~Y  178 (366)
                      .+.+..+.+|+.++..+++++.+.  ...  +||++||...|+.....+.  .+.       +       ..+..+...|
T Consensus        62 ~~~~~~~~vN~~~~~~l~~~~~~~~~~~g--~Iv~isS~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 APVELVARVNFLGLRHLTEALLPRMAPGG--AIVNVASLAGAEWPQRLEL--HKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             CCHHHhhhhchHHHHHHHHHHHHhccCCc--EEEEeCcHHhhccccchHH--HHhhhccchHHHHHHhhhccCCCcccHH
Confidence            356778999999999999998764  224  8999999988764322111  110       0       0133456789


Q ss_pred             HHHHHHHHHHHHHHH-HH---cCCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--
Q 044498          179 GLEKLATEGLCKHYT-KD---FEIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--  251 (366)
Q Consensus       179 ~~sK~~~E~~l~~~~-~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--  251 (366)
                      +.+|.+.+.+.+.++ .+   +|+++..+.++.+. .+..........-...........+...+|+|+++..++...  
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~  217 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAAR  217 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhc
Confidence            999999999988887 43   47888888766442 221111100000000000011123567899999999988542  


Q ss_pred             --CCCcEEecCC
Q 044498          252 --FREPLNIGSD  261 (366)
Q Consensus       252 --~~~~~~i~~~  261 (366)
                        .++.+.+.+|
T Consensus       218 ~~~G~~i~vdgg  229 (241)
T PRK12428        218 WINGVNLPVDGG  229 (241)
T ss_pred             CccCcEEEecCc
Confidence              3455555554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.29  E-value=1.1e-10  Score=106.50  Aligned_cols=172  Identities=16%  Similarity=0.047  Sum_probs=119.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--------ccccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ...+.++|||||+.||.++++.|.++|.+         |+...|+.....        ......+.++.+|+++..++.+
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~---------Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~  103 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAH---------VVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRK  103 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHH
Confidence            35578999999999999999999999999         999999864321        1223446789999999988877


Q ss_pred             hhc-------CCCEEEEcccccCCccccc-cCcchhhhhhHHHHHHHH----HHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGFIQ-SNHSVIMYKNTTISFDML----EAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~~~-~~~~~~~~~nv~~~~~ll----~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +.+       ..|++|++||....+.... +..+..+.+|..|+..|.    ..++.....  |+|++||..- +.....
T Consensus       104 fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~--RIV~vsS~~~-~~~~~~  180 (314)
T KOG1208|consen  104 FAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPS--RIVNVSSILG-GGKIDL  180 (314)
T ss_pred             HHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCC--CEEEEcCccc-cCccch
Confidence            643       5899999999987654222 345777999999865544    555555545  9999999653 221111


Q ss_pred             CCCcccccCCC-CCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCC
Q 044498          161 DTDVKESEAWP-AEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEK  206 (366)
Q Consensus       161 ~~~~~e~~~~~-~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~  206 (366)
                      .. +. .+... ......|+.||++...+..++++++.  +.+..+-|+
T Consensus       181 ~~-l~-~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG  227 (314)
T KOG1208|consen  181 KD-LS-GEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPG  227 (314)
T ss_pred             hh-cc-chhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCC
Confidence            10 01 11011 33334699999999999999988764  555555333

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.25  E-value=1.3e-10  Score=106.28  Aligned_cols=211  Identities=10%  Similarity=-0.031  Sum_probs=126.7

Q ss_pred             CCCeEEEEcC--CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc------cc---------cc----cccceEE
Q 044498           22 GKLRISSIGV--GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH------MM---------ED----MFCHEFH   80 (366)
Q Consensus        22 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~------~~---------~~----~~~v~~~   80 (366)
                      +++++|||||  +.-||.++++.|.+.|.+         |++ .|.....      ..         ..    ......+
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~---------Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAE---------ILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVY   77 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---------EEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeee
Confidence            6789999999  799999999999999999         877 3321100      00         00    0013567


Q ss_pred             EccC--CChh------------------HHHhhh-------cCCCEEEEcccccCC--c---cccccCcchhhhhhHHHH
Q 044498           81 LVDL--RVMD------------------NCLRMT-------SGVDNMSNLAADMGG--M---GFIQSNHSVIMYKNTTIS  128 (366)
Q Consensus        81 ~~D~--~~~~------------------~l~~~~-------~~~d~vi~~a~~~~~--~---~~~~~~~~~~~~~nv~~~  128 (366)
                      .+|+  .+.+                  ++.+++       ..+|++|||||....  .   .....+....+++|+.+.
T Consensus        78 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~  157 (303)
T PLN02730         78 PLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSF  157 (303)
T ss_pred             ecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHH
Confidence            7888  3222                  444433       258999999974321  1   111223355588999998


Q ss_pred             HHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCcccccCCCCCC-C-CchHHHHHHHHHHHHHHHHHc----CCcE
Q 044498          129 FDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-Q-DAYGLEKLATEGLCKHYTKDF----EIEC  200 (366)
Q Consensus       129 ~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p-~-~~Y~~sK~~~E~~l~~~~~~~----~~~~  200 (366)
                      ..+.+++...  .-.  ++|++||....-.                .| . ..|+.+|...+.+.+.++.++    ++++
T Consensus       158 ~~l~~~~~p~m~~~G--~II~isS~a~~~~----------------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrV  219 (303)
T PLN02730        158 VSLLQHFGPIMNPGG--ASISLTYIASERI----------------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRV  219 (303)
T ss_pred             HHHHHHHHHHHhcCC--EEEEEechhhcCC----------------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEE
Confidence            8888877654  113  8999998643211                12 2 369999999999999998875    4666


Q ss_pred             EEeCCCcH-HHHHHHHHhCCCC-eEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          201 RLVGEKAP-AAFSRKAVTSTDN-FEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       201 ~i~r~~~~-~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ..+-++.+ ..+... ...... ............+...+|++.+++.++...    .++.+.+.++
T Consensus       220 n~V~PG~v~T~~~~~-~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        220 NTISAGPLGSRAAKA-IGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             EEEeeCCccCchhhc-ccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            66644433 222111 000000 000000001123467899999999998642    4566766655

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.25  E-value=8.4e-10  Score=99.14  Aligned_cols=215  Identities=15%  Similarity=0.041  Sum_probs=139.5

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------ccccceEEEccCCChhH
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------DMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------~~~~v~~~~~D~~~~~~   89 (366)
                      ++.+++.++||||+.-||+++++.|.+.|.+         |++.+|........         ....+..+.+|+++.++
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~---------v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   74 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAK---------VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVD   74 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHH
Confidence            4457889999999999999999999999999         99999987642111         12236789999998776


Q ss_pred             HHhhh--------cCCCEEEEcccccCCcc-cccc---CcchhhhhhHHH-HHHHHHHHHHc----CCCceeEEEEeccc
Q 044498           90 CLRMT--------SGVDNMSNLAADMGGMG-FIQS---NHSVIMYKNTTI-SFDMLEAARMN----GVMSLTFFFVSSAC  152 (366)
Q Consensus        90 l~~~~--------~~~d~vi~~a~~~~~~~-~~~~---~~~~~~~~nv~~-~~~ll~a~~~~----~~~~~r~I~~SS~~  152 (366)
                      ..+++        .++|++||+||...... ..+.   ..+..+.+|+.+ ...+..++...    +..  .++++||..
T Consensus        75 ~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg--~I~~~ss~~  152 (270)
T KOG0725|consen   75 VEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGG--SIVNISSVA  152 (270)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCc--eEEEEeccc
Confidence            55543        36999999999775432 2222   334458889995 55555555443    343  688888864


Q ss_pred             ccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH---------HHHHHhCC
Q 044498          153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF---------SRKAVTST  219 (366)
Q Consensus       153 vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~---------~~~~~~~~  219 (366)
                      -+....             ..+ ..|+.+|.+.+++.+..+.++   ++++..+-|+.+ ..+         ...+.+ .
T Consensus       153 ~~~~~~-------------~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~-~  217 (270)
T KOG0725|consen  153 GVGPGP-------------GSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKE-A  217 (270)
T ss_pred             cccCCC-------------CCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhh-h
Confidence            332211             112 579999999999999988876   677766644322 222         011111 0


Q ss_pred             CCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          220 DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       220 ~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                         .........-.+...+|++..+..++..+    .++.+.+.+|.
T Consensus       218 ---~~~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  218 ---TDSKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             ---hccccccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence               00001111223567899999999988764    35566665554

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.24  E-value=8e-11  Score=97.52  Aligned_cols=156  Identities=14%  Similarity=0.045  Sum_probs=110.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCChhHHHhhhc----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      .+-+||||||+..||..|+++|.+.|-+         |++..|+......  .....+....+|+.|.+..+++++    
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~---------VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNT---------VIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCE---------EEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHh
Confidence            5668999999999999999999999999         9999998764332  234456788899999886665542    


Q ss_pred             ---CCCEEEEcccccCCcccc-----ccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCCCC
Q 044498           96 ---GVDNMSNLAADMGGMGFI-----QSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~-----~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                         ..+++|||||+.-.....     ..+....+.+|+.+..+|..++..+    .-.  .+|.+||.-.+-.....|  
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a--~IInVSSGLafvPm~~~P--  150 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEA--TIINVSSGLAFVPMASTP--  150 (245)
T ss_pred             hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc--eEEEeccccccCcccccc--
Confidence               589999999987543333     1122445778999888877776654    222  599999976554444333  


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHH---HHHcCCcEEEe
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHY---TKDFEIECRLV  203 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~---~~~~~~~~~i~  203 (366)
                                   .|..+|++.-.+...+   .+..++++.-+
T Consensus       151 -------------vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~  180 (245)
T COG3967         151 -------------VYCATKAAIHSYTLALREQLKDTSVEVIEL  180 (245)
T ss_pred             -------------cchhhHHHHHHHHHHHHHHhhhcceEEEEe
Confidence                         4999998876655444   34445555444

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.24  E-value=8.9e-11  Score=94.73  Aligned_cols=153  Identities=12%  Similarity=0.055  Sum_probs=114.1

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++||..+|.||||-.|+.+++.+++.+.-    ++   |+++.|...... .....+..+..|+.-.+++...++++|+.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~F----SK---V~~i~RR~~~d~-at~k~v~q~~vDf~Kl~~~a~~~qg~dV~   87 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQF----SK---VYAILRRELPDP-ATDKVVAQVEVDFSKLSQLATNEQGPDVL   87 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccc----ee---EEEEEeccCCCc-cccceeeeEEechHHHHHHHhhhcCCceE
Confidence            38899999999999999999999998731    22   888887753222 22233567778888878888888899999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      +.+-|-+-    .....+..+++.-.....+.++|++.|++  +|+.+||.+.   .              .+....|..
T Consensus        88 FcaLgTTR----gkaGadgfykvDhDyvl~~A~~AKe~Gck--~fvLvSS~GA---d--------------~sSrFlY~k  144 (238)
T KOG4039|consen   88 FCALGTTR----GKAGADGFYKVDHDYVLQLAQAAKEKGCK--TFVLVSSAGA---D--------------PSSRFLYMK  144 (238)
T ss_pred             EEeecccc----cccccCceEeechHHHHHHHHHHHhCCCe--EEEEEeccCC---C--------------cccceeeee
Confidence            98887542    23345666777778888999999999999  9999999532   1              223556889


Q ss_pred             HHHHHHHHHHHHHHHcCC-cEEEeCCCcH
Q 044498          181 EKLATEGLCKHYTKDFEI-ECRLVGEKAP  208 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~-~~~i~r~~~~  208 (366)
                      .|-+.|+-+.++    ++ .++|+|++.+
T Consensus       145 ~KGEvE~~v~eL----~F~~~~i~RPG~l  169 (238)
T KOG4039|consen  145 MKGEVERDVIEL----DFKHIIILRPGPL  169 (238)
T ss_pred             ccchhhhhhhhc----cccEEEEecCcce
Confidence            999999877665    55 4677777654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.24  E-value=2.8e-10  Score=101.63  Aligned_cols=162  Identities=18%  Similarity=0.067  Sum_probs=113.7

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----c-cccc----ccceEEEccCCC-hhH
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----M-MEDM----FCHEFHLVDLRV-MDN   89 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~-~~~~----~~v~~~~~D~~~-~~~   89 (366)
                      +.++++||||||++.||.++++.|.++|+.         |++..+.....    . ....    ..+.+..+|+++ .++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~   72 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGAR---------VVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEES   72 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCe---------EEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHH
Confidence            346789999999999999999999999999         88888775431    1 1111    235677799998 776


Q ss_pred             HHhhhc-------CCCEEEEcccccCC----ccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC
Q 044498           90 CLRMTS-------GVDNMSNLAADMGG----MGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        90 l~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +..+++       ++|++||+||....    ........+..+.+|+.+...+.+++...-.++ ++|++||..-. ...
T Consensus        73 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~  150 (251)
T COG1028          73 VEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGP  150 (251)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCC
Confidence            665542       48999999997532    111222345568899998888887655543332 79999996432 111


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCC
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEK  206 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~  206 (366)
                      .              ....|+.+|.+.+.+.+.++.+   +|+.+..+-++
T Consensus       151 ~--------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG  187 (251)
T COG1028         151 P--------------GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPG  187 (251)
T ss_pred             C--------------CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEec
Confidence            1              0467999999999988888755   47777777554

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.23  E-value=3.9e-10  Score=92.56  Aligned_cols=204  Identities=17%  Similarity=0.066  Sum_probs=130.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhh---
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMT---   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~---   94 (366)
                      .+..+||||+..||++++..|.+.|++         |.+.+++.......     .......+.+|+++..++...+   
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Gar---------v~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~   84 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGAR---------VAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEM   84 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcE---------EEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHH
Confidence            457999999999999999999999999         99988776532211     1123578899999987766644   


Q ss_pred             ----cCCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecc-cccCCCCCCCC
Q 044498           95 ----SGVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSA-CIYPEFKQLDT  162 (366)
Q Consensus        95 ----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~-~vyg~~~~~~~  162 (366)
                          ..+++++||||+....-   ....+++..+.+|+.++..+.+++.+.    +..++++|.+||. .-.|+..    
T Consensus        85 ~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G----  160 (256)
T KOG1200|consen   85 EKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG----  160 (256)
T ss_pred             HHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc----
Confidence                26999999999875422   233455666889999988777766543    2332479999994 2223222    


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCcc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                                  .+.|+.+|.-.--+.+..+++   .++++..+-|+++         ...+..+.. +-|.-       
T Consensus       161 ------------QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~-~iPmg-------  220 (256)
T KOG1200|consen  161 ------------QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILG-MIPMG-------  220 (256)
T ss_pred             ------------chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHc-cCCcc-------
Confidence                        334555554333333332222   3788877755444         333333333 22222       


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                        .+-..+|+|..++.+....    .+..+.+.+|
T Consensus       221 --r~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  221 --RLGEAEEVANLVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             --ccCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence              2445899999998887432    3566766655

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.19  E-value=3.3e-10  Score=95.98  Aligned_cols=152  Identities=13%  Similarity=0.069  Sum_probs=100.8

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc-ccc--------ccccccceEEEccCCChhHHHhhhc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN-EHM--------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~-~~~--------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|||||+|-||..+++.|.++|..        +|+++.|... ...        ......+.++.+|++|++++.+++.
T Consensus         2 tylitGG~gglg~~la~~La~~~~~--------~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~   73 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGAR--------RLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALA   73 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-S--------EEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCC--------EEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHH
Confidence            5899999999999999999999853        1888988832 111        1123467899999999999888864


Q ss_pred             -------CCCEEEEcccccCCccccccCcch---hhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc-ccCCCCCCCCCc
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSNHSV---IMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC-IYPEFKQLDTDV  164 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~~~~---~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~-vyg~~~~~~~~~  164 (366)
                             .++.|||+|+..........+++.   .+..-+.+..+|.+++.....+  .||.+||.. ++|...      
T Consensus        74 ~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~--~~i~~SSis~~~G~~g------  145 (181)
T PF08659_consen   74 QLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLD--FFILFSSISSLLGGPG------  145 (181)
T ss_dssp             TSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTS--EEEEEEEHHHHTT-TT------
T ss_pred             HHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCC--eEEEECChhHhccCcc------
Confidence                   468999999976432222223322   3566788899999999988888  899999965 455432      


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEe
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV  203 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~  203 (366)
                                ...|+..-...+.+..... ..+.++..+
T Consensus       146 ----------q~~YaaAN~~lda~a~~~~-~~g~~~~sI  173 (181)
T PF08659_consen  146 ----------QSAYAAANAFLDALARQRR-SRGLPAVSI  173 (181)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHH-HTTSEEEEE
T ss_pred             ----------hHhHHHHHHHHHHHHHHHH-hCCCCEEEE
Confidence                      3458888877777766544 457776655

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.18  E-value=5.4e-11  Score=105.69  Aligned_cols=208  Identities=19%  Similarity=0.164  Sum_probs=133.3

Q ss_pred             cCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc---c--ccccccceEEEccCCChhHHHhhh--------
Q 044498           30 GVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH---M--MEDMFCHEFHLVDLRVMDNCLRMT--------   94 (366)
Q Consensus        30 Gat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~---~--~~~~~~v~~~~~D~~~~~~l~~~~--------   94 (366)
                      |++  +-||.+++++|+++|++         |++.+|+....   .  .....+.+++.+|+++++++.+++        
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~---------V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGAN---------VILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEE---------EEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcC
Confidence            666  99999999999999999         99999987642   1  111223467999999998877763        


Q ss_pred             cCCCEEEEcccccCC----ccccc---cCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           95 SGVDNMSNLAADMGG----MGFIQ---SNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~----~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      .++|++||+++....    .....   .+....++.|+.+...+++++.+.-.++.++|++||......           
T Consensus        72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----------  140 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----------  140 (241)
T ss_dssp             SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----------
T ss_pred             CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----------
Confidence            468999999997653    11111   122445778888888888877553111127999998643221           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                          ......|+.+|...+.+.+.++.++    |+++..+.++.+ ..+........+.............+...+|+|.
T Consensus       141 ----~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~  216 (241)
T PF13561_consen  141 ----MPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVAN  216 (241)
T ss_dssp             ----STTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHH
T ss_pred             ----CccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHH
Confidence                2234479999999999999887764    566666654433 1221111100000000000011223568999999


Q ss_pred             HHHHHHhcC----CCCcEEecCC
Q 044498          243 GVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       243 ~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ++..|+...    .++++.+.+|
T Consensus       217 ~v~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  217 AVLFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHHHhCccccCccCCeEEECCC
Confidence            999999653    5778888765

...

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.16  E-value=3.8e-10  Score=95.07  Aligned_cols=209  Identities=13%  Similarity=0.032  Sum_probs=139.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC-Cccc------cccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN-KNEH------MMEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~-~~~~------~~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .++++++||+.|.||..+.++|+++|..         +.++..+ .+..      ...+...+-|+++|+++..++++.+
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik---------~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f   74 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIK---------VLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAF   74 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCch---------heeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHH
Confidence            5789999999999999999999999987         6666533 3321      1123345789999999988888776


Q ss_pred             c-------CCCEEEEcccccCCccccccCcchhhhhhHHHHH----HHHHHHHHc-CCCceeEEEEecccccCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISF----DMLEAARMN-GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~----~ll~a~~~~-~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                      +       .+|++||.||..     .+.+.+.++.+|+.+..    ..+....+. +.++.-+|.+||.  +|-.+.   
T Consensus        75 ~ki~~~fg~iDIlINgAGi~-----~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv--~GL~P~---  144 (261)
T KOG4169|consen   75 DKILATFGTIDILINGAGIL-----DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV--AGLDPM---  144 (261)
T ss_pred             HHHHHHhCceEEEEcccccc-----cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc--cccCcc---
Confidence            4       589999999974     36778888999988754    445555443 3332358889984  443321   


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHH-----HHHHcCCcEEEeCCCcHHHHHHHHHhC-CCCeEEecCCcce-----
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKH-----YTKDFEIECRLVGEKAPAAFSRKAVTS-TDNFEMWGDGKQT-----  231 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~-----~~~~~~~~~~i~r~~~~~~~~~~~~~~-~~~~~i~~~~~~~-----  231 (366)
                              |  -...|+.||...-.+.+.     +-.+.|+++..+.+++....+...+.. +.-++.   .++.     
T Consensus       145 --------p--~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~---~~~~~~~l~  211 (261)
T KOG4169|consen  145 --------P--VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEY---SDSIKEALE  211 (261)
T ss_pred             --------c--cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccc---cHHHHHHHH
Confidence                    1  133588888765444443     333458998888888877766666542 111111   1111     


Q ss_pred             -eeeeeHHHHHHHHHHHHhcC-CCCcEEecCCC
Q 044498          232 -RSLTFIDECVEGVLRLIKSD-FREPLNIGSDE  262 (366)
Q Consensus       232 -~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~  262 (366)
                       ..--...+++.-++.+++.+ .+.+|-+..+.
T Consensus       212 ~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  212 RAPKQSPACCAINIVNAIEYPKNGAIWKVDSGS  244 (261)
T ss_pred             HcccCCHHHHHHHHHHHHhhccCCcEEEEecCc
Confidence             11235688888999999886 56667776654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.15  E-value=2.4e-10  Score=95.15  Aligned_cols=148  Identities=14%  Similarity=0.058  Sum_probs=107.2

Q ss_pred             CCCCCeEEEEcC-CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhc--
Q 044498           20 PSGKLRISSIGV-GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        20 ~~~~~~vlItGa-tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      +++.++|||||+ .|.||.+|+++|.+.|+.         |++..|+...-.... ..++.....|+++++++.....  
T Consensus         4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~---------V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~ev   74 (289)
T KOG1209|consen    4 QSQPKKVLITGCSSGGIGYALAKEFARNGYL---------VYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEV   74 (289)
T ss_pred             ccCCCeEEEeecCCcchhHHHHHHHHhCCeE---------EEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHH
Confidence            446678999975 699999999999999999         999998876533332 4567899999999998776542  


Q ss_pred             ------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                            ..|+++|+||........+.+   -+..+++|+.|..++.++....  +.| ..+|+++|...|-..       
T Consensus        75 r~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpf-------  146 (289)
T KOG1209|consen   75 RANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPF-------  146 (289)
T ss_pred             hhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEecc-------
Confidence                  479999999987643333333   3556999999988888777532  112 169999997665432       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHY  192 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~  192 (366)
                              .-.+.|..||++.-.+.+.+
T Consensus       147 --------pf~~iYsAsKAAihay~~tL  166 (289)
T KOG1209|consen  147 --------PFGSIYSASKAAIHAYARTL  166 (289)
T ss_pred             --------chhhhhhHHHHHHHHhhhhc
Confidence                    22457999998866554443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.14  E-value=1.5e-09  Score=96.16  Aligned_cols=160  Identities=13%  Similarity=0.072  Sum_probs=115.3

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +...+-|||||+-...|..++++|.++|+.         |.+-.-.++....    ....+...+..|+++++++.++.+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~---------V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~   96 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFR---------VFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQ   96 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCE---------EEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHH
Confidence            335667999999999999999999999999         8877644332111    114456788999999999888753


Q ss_pred             ---------CCCEEEEcccccCCcccc----ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCC
Q 044498           96 ---------GVDNMSNLAADMGGMGFI----QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        96 ---------~~d~vi~~a~~~~~~~~~----~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                               +.-.+|||||+.+.....    ..+....+++|+.|+..+..++.    ++..   |+|++||..  | ..
T Consensus        97 ~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arG---RvVnvsS~~--G-R~  170 (322)
T KOG1610|consen   97 WVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARG---RVVNVSSVL--G-RV  170 (322)
T ss_pred             HHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccC---eEEEecccc--c-Cc
Confidence                     567999999976442211    12334558899999766665554    4443   899999952  2 22


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCC
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEK  206 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~  206 (366)
                                  +.....+|+.||++.|.+......+   +|+.++++-++
T Consensus       171 ------------~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG  209 (322)
T KOG1610|consen  171 ------------ALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG  209 (322)
T ss_pred             ------------cCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence                        2223678999999999988877665   59999999554

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.12  E-value=9.5e-10  Score=92.39  Aligned_cols=262  Identities=16%  Similarity=0.107  Sum_probs=153.6

Q ss_pred             CCCeEEEEcCCCchhHHHHH-----HHHHcC----CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIAR-----RLKSER----HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~-----~L~~~g----~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +..+.++-+++|+|+..|..     ++-+.+    |+         |++++|.+....      +.+-+.|....     
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~---------vtv~sR~pg~~r------itw~el~~~Gi-----   70 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHA---------VTVLSRSPGKAR------ITWPELDFPGI-----   70 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccc---------eEEEecCCCCcc------cccchhcCCCC-----
Confidence            33567788999999988876     333333    66         999999875432      12222222211     


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhh-----HHHHHHHHHHHHHcC--CCceeEEEEecccccCCCCCCCCCcc
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKN-----TTISFDMLEAARMNG--VMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n-----v~~~~~ll~a~~~~~--~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                       .-.|+..++.++.-..  ..-.-....+..|     +..+..|.++..++.  .+  .+|.+|..++|-......  |+
T Consensus        71 -p~sc~a~vna~g~n~l--~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~--~~Vlv~gva~y~pS~s~e--Y~  143 (315)
T KOG3019|consen   71 -PISCVAGVNAVGNNAL--LPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEAR--PTVLVSGVAVYVPSESQE--YS  143 (315)
T ss_pred             -ceehHHHHhhhhhhcc--CchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCC--CeEEEEeeEEeccccccc--cc
Confidence             1133444444442210  0011122223333     445778888888765  34  589999999997655432  24


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC--------cHHHHHHHHHh-CCCCeEEecCCcceeeeee
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK--------APAAFSRKAVT-STDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~--------~~~~~~~~~~~-~~~~~~i~~~~~~~~~~i~  236 (366)
                      |+.  +....+  -.+++..|..-.........+.+++|.+        .+..++--+-. -+.+  + |++.|++.|||
T Consensus       144 e~~--~~qgfd--~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGP--l-GsG~Q~fpWIH  216 (315)
T KOG3019|consen  144 EKI--VHQGFD--ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGP--L-GSGQQWFPWIH  216 (315)
T ss_pred             ccc--ccCChH--HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCc--C-CCCCeeeeeee
Confidence            432  222222  2455554443222222224667777532        22222222211 1333  2 89999999999


Q ss_pred             HHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-------CCc-------ccccChHH
Q 044498          237 IDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-------GVR-------GRNSDDTL  301 (366)
Q Consensus       237 v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-------~~~-------~~~~~~~k  301 (366)
                      ++|++..+..+++++ ..++.|-..+++++..|+.+.+.++++++.-   .|.|.       +..       ....-..|
T Consensus       217 v~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~---~pvP~fvvqA~fG~erA~~vLeGqKV~Pqr  293 (315)
T KOG3019|consen  217 VDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSW---LPVPDFVVQALFGPERATVVLEGQKVLPQR  293 (315)
T ss_pred             hHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcc---cCCcHHHHHHHhCccceeEEeeCCcccchh
Confidence            999999999999985 7899999999999999999999999998632   22222       111       11223345


Q ss_pred             HHHHcCCCCCC-CHHHHHHHH
Q 044498          302 INEELGWAPTM-KQKDELRIT  321 (366)
Q Consensus       302 ~~~~lG~~p~~-~~~e~l~~~  321 (366)
                      + .++||+-++ .+.+++++.
T Consensus       294 a-l~~Gf~f~yp~vk~Al~~i  313 (315)
T KOG3019|consen  294 A-LELGFEFKYPYVKDALRAI  313 (315)
T ss_pred             H-hhcCceeechHHHHHHHHH
Confidence            5 458998887 567776654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.07  E-value=6e-09  Score=95.22  Aligned_cols=214  Identities=9%  Similarity=-0.013  Sum_probs=123.0

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC---------ccccc------cccc-----cceE
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNK---------NEHMM------EDMF-----CHEF   79 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~---------~~~~~------~~~~-----~v~~   79 (366)
                      +++.++||||+  .-||+++++.|.++|.+         |++.++.+         .....      ....     .+..
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~---------Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   77 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGAT---------ILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYP   77 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCE---------EEEEeccchhhhhhhhcccccccccccccccchhhhhhHHH
Confidence            56889999995  89999999999999999         88865431         00000      0000     0011


Q ss_pred             EEccCCChh------------------HHHhhh-------cCCCEEEEcccccCC--cccccc---CcchhhhhhHHHHH
Q 044498           80 HLVDLRVMD------------------NCLRMT-------SGVDNMSNLAADMGG--MGFIQS---NHSVIMYKNTTISF  129 (366)
Q Consensus        80 ~~~D~~~~~------------------~l~~~~-------~~~d~vi~~a~~~~~--~~~~~~---~~~~~~~~nv~~~~  129 (366)
                      +..|+.+.+                  ++.+++       .++|++||+||....  ......   +....+++|+.+..
T Consensus        78 ~~~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~  157 (299)
T PRK06300         78 MDASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFV  157 (299)
T ss_pred             hhhhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHH
Confidence            223333332                  233322       369999999985321  111222   33445789999999


Q ss_pred             HHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC-C-CchHHHHHHHHHHHHHHHHHc----CCcEEEe
Q 044498          130 DMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-Q-DAYGLEKLATEGLCKHYTKDF----EIECRLV  203 (366)
Q Consensus       130 ~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p-~-~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~  203 (366)
                      ++++++...=.++.++|.+||..-.-.                .| . ..|+.+|...+.+.+.++.++    |+++..+
T Consensus       158 ~l~~a~~p~m~~~G~ii~iss~~~~~~----------------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V  221 (299)
T PRK06300        158 SLLSHFGPIMNPGGSTISLTYLASMRA----------------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTI  221 (299)
T ss_pred             HHHHHHHHHhhcCCeEEEEeehhhcCc----------------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence            998888764111127898887432110                11 2 269999999999999888764    5777777


Q ss_pred             CCCcH-HHHHHHHHhCCCCe-EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          204 GEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       204 r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .++.+ ..+...... .... ...........+...+|++.++.+++...    .++++.+.++
T Consensus       222 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        222 SAGPLASRAGKAIGF-IERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             EeCCccChhhhcccc-cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            55433 222111000 0000 00000001122457899999999988642    4667777655

>PLN00106 malate dehydrogenase

Probab=99.03  E-value=3.7e-09  Score=96.91  Aligned_cols=163  Identities=11%  Similarity=0.023  Sum_probs=112.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ..||+|||++|.||+.++..|..++.  +         +..++.........  ..........++.+.+++...++++|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~e---------l~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aD   88 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSE---------LHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGAD   88 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCE---------EEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCC
Confidence            35899999999999999999987664  6         88888766222111  11111223334444445677889999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCch
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAY  178 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y  178 (366)
                      +|||+||...   ....+..+.+..|...+.++.+.+.+++.+  ++|+++|--+=+...-..  +.-.......|...|
T Consensus        89 iVVitAG~~~---~~g~~R~dll~~N~~i~~~i~~~i~~~~p~--aivivvSNPvD~~~~i~t--~~~~~~s~~p~~~vi  161 (323)
T PLN00106         89 LVIIPAGVPR---KPGMTRDDLFNINAGIVKTLCEAVAKHCPN--ALVNIISNPVNSTVPIAA--EVLKKAGVYDPKKLF  161 (323)
T ss_pred             EEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC--eEEEEeCCCccccHHHHH--HHHHHcCCCCcceEE
Confidence            9999999753   223466788999999999999999999988  899988832210000000  000011256678899


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEE
Q 044498          179 GLEKLATEGLCKHYTKDFEIECR  201 (366)
Q Consensus       179 ~~sK~~~E~~l~~~~~~~~~~~~  201 (366)
                      |.+++..+++-..+++.++++..
T Consensus       162 G~~~LDs~Rl~~~lA~~lgv~~~  184 (323)
T PLN00106        162 GVTTLDVVRANTFVAEKKGLDPA  184 (323)
T ss_pred             EEecchHHHHHHHHHHHhCCChh
Confidence            99999999999999999887643

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.01  E-value=3e-09  Score=97.45  Aligned_cols=163  Identities=12%  Similarity=0.045  Sum_probs=111.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccc--ccccccceEEEccCCChhHHHhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHM--MEDMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~--~~~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      +|+||+|+|++|.||+.++..|..++  .+         +..+++......  ............+.+++.++.+.++++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~e---------lvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~ga   77 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSE---------LSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGA   77 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCE---------EEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCC
Confidence            67899999999999999999998655  46         888887332221  111111133445566655556678999


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA  177 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~  177 (366)
                      |+||+++|...   ....+....+..|+.++.++++++++++++  ++|+++|.-+-....-...  .-.......|...
T Consensus        78 DvVVitaG~~~---~~~~tR~dll~~N~~i~~~i~~~i~~~~~~--~iviv~SNPvdv~~~~~~~--~~~~~sg~p~~~v  150 (321)
T PTZ00325         78 DLVLICAGVPR---KPGMTRDDLFNTNAPIVRDLVAAVASSAPK--AIVGIVSNPVNSTVPIAAE--TLKKAGVYDPRKL  150 (321)
T ss_pred             CEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC--eEEEEecCcHHHHHHHHHh--hhhhccCCChhhe
Confidence            99999999643   223456778999999999999999999999  9999999544322111000  0001124567788


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcE
Q 044498          178 YGLEKLATEGLCKHYTKDFEIEC  200 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~  200 (366)
                      ||.+-+..-++-...++.+++..
T Consensus       151 iG~g~LDs~R~r~~la~~l~v~~  173 (321)
T PTZ00325        151 FGVTTLDVVRARKFVAEALGMNP  173 (321)
T ss_pred             eechhHHHHHHHHHHHHHhCcCh
Confidence            88886777777777777776653

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.97  E-value=2.2e-08  Score=88.75  Aligned_cols=197  Identities=17%  Similarity=0.146  Sum_probs=130.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhhhc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .+|+|||++..||..++..+..+|++         |+++.|+..+..+.        ....+.+..+|+.|.+++...++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~---------Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~  104 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGAD---------VTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIE  104 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCc---------eEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHh
Confidence            58999999999999999999999999         99999987643221        12235688899999988887764


Q ss_pred             -------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHcC-----CCceeEEEEeccc-ccCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMNG-----VMSLTFFFVSSAC-IYPEFKQ  159 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~-----~~~~r~I~~SS~~-vyg~~~~  159 (366)
                             -+|.+|+|||..-+..+...++   +..+++|-.++.++++++...-     ..  +++.+||.. .+     
T Consensus       105 ~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g--~I~~vsS~~a~~-----  177 (331)
T KOG1210|consen  105 ELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLG--RIILVSSQLAML-----  177 (331)
T ss_pred             hhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCc--EEEEehhhhhhc-----
Confidence                   3799999999653333333333   3348899999999888775431     22  688888742 22     


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeC-CC-cHHHHHHHHHhCCCCeEEecCCcceeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVG-EK-APAAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r-~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                 +....+.|..+|.+...+......+   +++.++..- ++ ..+.|-+....+.....+...+   -+.
T Consensus       178 -----------~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~---ss~  243 (331)
T KOG1210|consen  178 -----------GIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGG---SSV  243 (331)
T ss_pred             -----------CcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCC---CCC
Confidence                       2344667888887776665555554   366666652 22 2234443333322222222222   234


Q ss_pred             eeHHHHHHHHHHHHhc
Q 044498          235 TFIDECVEGVLRLIKS  250 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~  250 (366)
                      +.-+++|.+++.-+.+
T Consensus       244 ~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  244 IKCEEMAKAIVKGMKR  259 (331)
T ss_pred             cCHHHHHHHHHhHHhh
Confidence            7789999999887765

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.97  E-value=9.1e-09  Score=115.70  Aligned_cols=155  Identities=10%  Similarity=0.020  Sum_probs=113.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccc-------------------------------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEH-------------------------------   69 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~-------------------------------   69 (366)
                      +++.+|||||++.||..++++|.++ |.+         |++++|+....                               
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~---------viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P 2066 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAH---------FILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTP 2066 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCE---------EEEEeCCcccccCchhhhccchHHHHHhhhhhhhhccccccc
Confidence            5678999999999999999999998 588         99888872100                               


Q ss_pred             ----------------------cccccccceEEEccCCChhHHHhhhc------CCCEEEEcccccCCccccccC---cc
Q 044498           70 ----------------------MMEDMFCHEFHLVDLRVMDNCLRMTS------GVDNMSNLAADMGGMGFIQSN---HS  118 (366)
Q Consensus        70 ----------------------~~~~~~~v~~~~~D~~~~~~l~~~~~------~~d~vi~~a~~~~~~~~~~~~---~~  118 (366)
                                            .......+.++.+|++|.+++.++++      ++|+|||+||..........+   ..
T Consensus      2067 ~~i~~~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~ 2146 (2582)
T TIGR02813      2067 KKVDALVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFN 2146 (2582)
T ss_pred             chhhhcccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHH
Confidence                                  00011246789999999998877663      489999999975432222222   34


Q ss_pred             hhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc-cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-
Q 044498          119 VIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI-YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-  196 (366)
Q Consensus       119 ~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v-yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-  196 (366)
                      ..+++|+.+..++++++.....+  +||++||..- ||..                ....|+.+|.....+.+.++.++ 
T Consensus      2147 ~v~~~nv~G~~~Ll~al~~~~~~--~IV~~SSvag~~G~~----------------gqs~YaaAkaaL~~la~~la~~~~ 2208 (2582)
T TIGR02813      2147 AVYGTKVDGLLSLLAALNAENIK--LLALFSSAAGFYGNT----------------GQSDYAMSNDILNKAALQLKALNP 2208 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCC--eEEEEechhhcCCCC----------------CcHHHHHHHHHHHHHHHHHHHHcC
Confidence            45889999999999999887777  8999999643 4432                24469999999888888877765 


Q ss_pred             CCcEEEe
Q 044498          197 EIECRLV  203 (366)
Q Consensus       197 ~~~~~i~  203 (366)
                      ++++..+
T Consensus      2209 ~irV~sI 2215 (2582)
T TIGR02813      2209 SAKVMSF 2215 (2582)
T ss_pred             CcEEEEE
Confidence            3554444

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.96  E-value=6.5e-09  Score=87.70  Aligned_cols=190  Identities=14%  Similarity=0.110  Sum_probs=135.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      .++++.|+.||.|+++++.....++.         |..+.|+..+.....+ ..+.+..+|.....-+...+.++..++-
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~s---------vgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e  123 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHS---------VGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYE  123 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhcee---------eeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHH
Confidence            46999999999999999999999999         9999988765443332 3467788888877666667788999998


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +++..       .+......+|-....+-.+++.+.+++  +|+|+|-. -||-.             +..|. .|-.+|
T Consensus       124 ~~ggf-------gn~~~m~~ing~ani~a~kaa~~~gv~--~fvyISa~-d~~~~-------------~~i~r-GY~~gK  179 (283)
T KOG4288|consen  124 MMGGF-------GNIILMDRINGTANINAVKAAAKAGVP--RFVYISAH-DFGLP-------------PLIPR-GYIEGK  179 (283)
T ss_pred             HhcCc-------cchHHHHHhccHhhHHHHHHHHHcCCc--eEEEEEhh-hcCCC-------------Cccch-hhhccc
Confidence            88843       345566678888888999999999999  99999963 23221             23334 699999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCCcHHH----------------HHHHHHh----CCCCeEEecCCcceeeeeeHHHHHH
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEKAPAA----------------FSRKAVT----STDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~~~~~----------------~~~~~~~----~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                      .++|..+...   ++++-+++|++++..                -+....+    --..+++.  +.-....+.++++|.
T Consensus       180 R~AE~Ell~~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~  254 (283)
T KOG4288|consen  180 REAEAELLKK---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVAL  254 (283)
T ss_pred             hHHHHHHHHh---cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHH
Confidence            9999866543   457777887654411                1222221    11122332  334456788999999


Q ss_pred             HHHHHHhcC
Q 044498          243 GVLRLIKSD  251 (366)
Q Consensus       243 ~~~~~l~~~  251 (366)
                      +.+.++..+
T Consensus       255 aal~ai~dp  263 (283)
T KOG4288|consen  255 AALKAIEDP  263 (283)
T ss_pred             HHHHhccCC
Confidence            999988876

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.90  E-value=5.8e-08  Score=82.08  Aligned_cols=155  Identities=12%  Similarity=0.048  Sum_probs=103.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEE-EeCCCccccc------cccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIA-SDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~-~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .++.|+||||+-.||-.|+++|++. |.+         +++ ..|++.....      ....++.+++.|+++.+++.++
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~---------~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~   72 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIE---------VIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNF   72 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcE---------EEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHH
Confidence            3456999999999999999999975 555         544 4454443211      1356789999999998877765


Q ss_pred             h---------cCCCEEEEcccccCCccccccCc----chhhhhhHHHHHHHHHHHHH----c---------CCCceeEEE
Q 044498           94 T---------SGVDNMSNLAADMGGMGFIQSNH----SVIMYKNTTISFDMLEAARM----N---------GVMSLTFFF  147 (366)
Q Consensus        94 ~---------~~~d~vi~~a~~~~~~~~~~~~~----~~~~~~nv~~~~~ll~a~~~----~---------~~~~~r~I~  147 (366)
                      .         ++.+++|++||....+......+    -..+++|+.+...+.+++..    .         .+.--.+|+
T Consensus        73 ~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIin  152 (249)
T KOG1611|consen   73 VQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIIN  152 (249)
T ss_pred             HHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEE
Confidence            4         36899999999875432222222    23478898887666554432    1         111014888


Q ss_pred             EecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC
Q 044498          148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE  197 (366)
Q Consensus       148 ~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~  197 (366)
                      +||.+--  ..+          ....+..+|..||.+.-.+.+...-++.
T Consensus       153 isS~~~s--~~~----------~~~~~~~AYrmSKaAlN~f~ksls~dL~  190 (249)
T KOG1611|consen  153 ISSSAGS--IGG----------FRPGGLSAYRMSKAALNMFAKSLSVDLK  190 (249)
T ss_pred             eeccccc--cCC----------CCCcchhhhHhhHHHHHHHHHHhhhhhc
Confidence            9885322  111          1335678899999999998888877653

>PRK06720 hypothetical protein; Provisional

Probab=98.81  E-value=6.5e-08  Score=80.75  Aligned_cols=78  Identities=18%  Similarity=0.026  Sum_probs=60.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT-   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~-   94 (366)
                      +++.++||||+|.||..+++.|.+.|++         |++++|+......      .....+.++.+|+++.+++.+++ 
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~---------V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~   85 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAK---------VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVIS   85 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999876542211      11223467899999988777644 


Q ss_pred             ------cCCCEEEEcccccC
Q 044498           95 ------SGVDNMSNLAADMG  108 (366)
Q Consensus        95 ------~~~d~vi~~a~~~~  108 (366)
                            .++|++||+||...
T Consensus        86 ~~~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         86 ITLNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             HHHHHcCCCCEEEECCCcCC
Confidence                  36999999999754

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.76  E-value=6.2e-08  Score=89.40  Aligned_cols=115  Identities=12%  Similarity=0.004  Sum_probs=79.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-------CCCCCCCCccEEEEEeCCCccc-cccccccce----EEEccCCChhHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-------HYSTSIPNALYIIASDWNKNEH-MMEDMFCHE----FHLVDLRVMDNC   90 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-------~~~~~~~~~~~V~~~~r~~~~~-~~~~~~~v~----~~~~D~~~~~~l   90 (366)
                      ..||+||||+|+||++++..|+..+       .+         |.++++..... .......+.    ....|+....++
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~e---------l~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~   72 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVI---------LHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDP   72 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcE---------EEEEEcCCccccccceeeehhhccccccCCceecCCH
Confidence            3589999999999999999999855       36         89998865321 111111000    112344444566


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEec
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSS  150 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS  150 (366)
                      .+.++++|+|||+||...   ....+....++.|+.....+.....++. .+ ..+|.+|.
T Consensus        73 ~~~l~~aDiVI~tAG~~~---~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~-~iiivvsN  129 (325)
T cd01336          73 EEAFKDVDVAILVGAMPR---KEGMERKDLLKANVKIFKEQGEALDKYAKKN-VKVLVVGN  129 (325)
T ss_pred             HHHhCCCCEEEEeCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEEecC
Confidence            677889999999999753   2234567889999999999999998885 33 24555554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.76  E-value=1.9e-08  Score=81.28  Aligned_cols=203  Identities=17%  Similarity=0.112  Sum_probs=133.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .+..|++||+.-.||+.++.+|.+.|.+         |+++.|.+......   ...-+..+.+|+.+-+.+.+.+.   
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~---------ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~   76 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQ---------VIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVF   76 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCE---------EEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccC
Confidence            4678999999999999999999999999         99999987653322   22236889999999999888875   


Q ss_pred             CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHH----HHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEA----ARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      -+|.++|+||......+.   ..+-+..+++|+.+..++.+.    +....+++ .++.+||.+..-             
T Consensus        77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~G-aIVNvSSqas~R-------------  142 (245)
T KOG1207|consen   77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKG-AIVNVSSQASIR-------------  142 (245)
T ss_pred             chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCc-eEEEecchhccc-------------
Confidence            479999999976432222   223455688999987777766    33344442 599999954311             


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHcCCc---EEEeCCCcHHHHHHH-HHhC-CCCeEEecCCcceeeeeeHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDFEIE---CRLVGEKAPAAFSRK-AVTS-TDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~---~~i~r~~~~~~~~~~-~~~~-~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                        +...++.|..+|.+.+.+.+..+-+.|..   +..+.+.++..-|.+ -+.. .+.-++ -+.-....|.-++.++.+
T Consensus       143 --~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~m-L~riPl~rFaEV~eVVnA  219 (245)
T KOG1207|consen  143 --PLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKM-LDRIPLKRFAEVDEVVNA  219 (245)
T ss_pred             --ccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccch-hhhCchhhhhHHHHHHhh
Confidence              33447789999999999998888887643   322333222111111 0000 000001 011122346678999999


Q ss_pred             HHHHHhc
Q 044498          244 VLRLIKS  250 (366)
Q Consensus       244 ~~~~l~~  250 (366)
                      +..++..
T Consensus       220 ~lfLLSd  226 (245)
T KOG1207|consen  220 VLFLLSD  226 (245)
T ss_pred             heeeeec
Confidence            9888855

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.72  E-value=4.7e-08  Score=90.87  Aligned_cols=95  Identities=22%  Similarity=0.196  Sum_probs=78.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhcCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ||+|||+|+ |+||+.+++.|.++| .+         |++.+|+..+....   ...+++...+|+.+.+++.+++++.|
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~---------V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d   70 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGE---------VTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFD   70 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCce---------EEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCC
Confidence            689999998 999999999999998 78         99999997654332   22368999999999999999999999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +|||++...                   ...+++++|.+.|+.   ++=+|
T Consensus        71 ~VIn~~p~~-------------------~~~~i~ka~i~~gv~---yvDts   99 (389)
T COG1748          71 LVINAAPPF-------------------VDLTILKACIKTGVD---YVDTS   99 (389)
T ss_pred             EEEEeCCch-------------------hhHHHHHHHHHhCCC---EEEcc
Confidence            999999943                   233799999999884   66444

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.69  E-value=1.6e-08  Score=68.90  Aligned_cols=58  Identities=26%  Similarity=0.466  Sum_probs=39.1

Q ss_pred             HHHhcCCCCCCCcCCCCCC-CcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          273 ILSFENEKLPIHPIPGPEG-VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       273 i~~~~g~~~~~~~~~~~~~-~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      +.++.|+++++.+.|.+.+ ....+.|.+|++++|||+|+++++++++++.+|+++|..
T Consensus         2 ~e~vtG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np~   60 (62)
T PF13950_consen    2 FEKVTGKKIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNPN   60 (62)
T ss_dssp             HHHHHTS---EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHSTT
T ss_pred             cHHHHCCCCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCcC
Confidence            6788999999999887765 556689999999999999999999999999999999863

...

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.69  E-value=4.8e-08  Score=82.06  Aligned_cols=97  Identities=10%  Similarity=-0.041  Sum_probs=71.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc---
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      |+++|||||||+|. +++.|.++|++         |++.+|++......     ....+.++.+|+.|.+++.++++   
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~---------V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l   70 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFH---------VSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTI   70 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCE---------EEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            57999999998876 99999999999         99998875432111     11245778899999998887664   


Q ss_pred             ----CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC--ceeEEEEe
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM--SLTFFFVS  149 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~--~~r~I~~S  149 (366)
                          .+|.+|+.+-                   +.+..++..+|++.+++  ..+|+++=
T Consensus        71 ~~~g~id~lv~~vh-------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~  111 (177)
T PRK08309         71 EKNGPFDLAVAWIH-------------------SSAKDALSVVCRELDGSSETYRLFHVL  111 (177)
T ss_pred             HHcCCCeEEEEecc-------------------ccchhhHHHHHHHHccCCCCceEEEEe
Confidence                3566664443                   55678899999998853  22477654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.67  E-value=1.2e-07  Score=84.22  Aligned_cols=146  Identities=12%  Similarity=0.018  Sum_probs=100.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhH----HHhhh
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDN----CLRMT   94 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~----l~~~~   94 (366)
                      ..|||||..||++.+++|.++|.+         |+.++|...+..       +.....+.++..|+++.+.    +.+.+
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~n---------vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l  122 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFN---------VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL  122 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh
Confidence            899999999999999999999999         999999876432       1122456788899987654    45545


Q ss_pred             c--CCCEEEEcccccCCc-cccccCc----chhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCCCC
Q 044498           95 S--GVDNMSNLAADMGGM-GFIQSNH----SVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        95 ~--~~d~vi~~a~~~~~~-~~~~~~~----~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                      .  .+.++|||+|..... ......+    ...+.+|+.+...+.+.....    +..  -+|++||.+-   ..     
T Consensus       123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G--~IvnigS~ag---~~-----  192 (312)
T KOG1014|consen  123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKG--IIVNIGSFAG---LI-----  192 (312)
T ss_pred             cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCc--eEEEeccccc---cc-----
Confidence            5  467999999977521 1111111    234667877766655555432    332  5899998421   11     


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE  197 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~  197 (366)
                             |..-.+.|+.+|...+.+.....+++.
T Consensus       193 -------p~p~~s~ysasK~~v~~~S~~L~~Ey~  219 (312)
T KOG1014|consen  193 -------PTPLLSVYSASKAFVDFFSRCLQKEYE  219 (312)
T ss_pred             -------cChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   223367799999998888888777763

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.58  E-value=1.3e-07  Score=80.07  Aligned_cols=205  Identities=12%  Similarity=-0.036  Sum_probs=120.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc----
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      .+-|||||++-.||..++..+...+.+       ..+.+..|........   ......+..+|++....+.+..+    
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e-------~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~   78 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDE-------ALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRK   78 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchH-------HHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhh
Confidence            356999999999999999999988765       0033333433221110   00112344455555543443321    


Q ss_pred             ---CCCEEEEcccccCCccccc------cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCC
Q 044498           96 ---GVDNMSNLAADMGGMGFIQ------SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~~------~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                         +-|.|||+||..++.....      .....+++.|+.....|...+...    . .+  -+|++||.+..-      
T Consensus        79 k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~--~vVnvSS~aav~------  150 (253)
T KOG1204|consen   79 KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNG--NVVNVSSLAAVR------  150 (253)
T ss_pred             cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccC--eEEEecchhhhc------
Confidence               4799999999877543222      123456888998877776655443    2 23  588999864321      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcHHHHHHHHHhCCCCe-----EEecCCcceeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAPAAFSRKAVTSTDNF-----EMWGDGKQTRSL  234 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~  234 (366)
                               |......|+.+|++.+.+.+..+.+-  ++.+..+.|+++.--|...++++-.+     ..+..-...-.+
T Consensus       151 ---------p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~l  221 (253)
T KOG1204|consen  151 ---------PFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQL  221 (253)
T ss_pred             ---------cccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCc
Confidence                     44557789999999999999988775  44444456776655555555422100     000000111234


Q ss_pred             eeHHHHHHHHHHHHhcC
Q 044498          235 TFIDECVEGVLRLIKSD  251 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~  251 (366)
                      +...+.++.+..+++..
T Consensus       222 l~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  222 LDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             CChhhHHHHHHHHHHhc
Confidence            55666677777766653

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.50  E-value=8e-07  Score=78.90  Aligned_cols=92  Identities=9%  Similarity=0.022  Sum_probs=73.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      |+|||+||||. |+.|++.|.+.|++         |++..+...........+...+..+..+.+++.+.++  ++++||
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~---------v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIE---------ILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCe---------EEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence            58999999999 99999999999999         9998888765433333333456667777788888775  599999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +.+-..                -...+.++.++|++.+++
T Consensus        71 DAtHPf----------------A~~is~~a~~a~~~~~ip   94 (256)
T TIGR00715        71 DATHPF----------------AAQITTNATAVCKELGIP   94 (256)
T ss_pred             EcCCHH----------------HHHHHHHHHHHHHHhCCc
Confidence            987743                267788999999999997

This enzyme was found to be a monomer by gel filtration.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.50  E-value=1.5e-06  Score=74.71  Aligned_cols=161  Identities=16%  Similarity=0.090  Sum_probs=104.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----------cccccceEEEccCCChhHHHhh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.+||||++..||-+|+.+|++...+    ...+.+.+.+|+.++...          .....++++.+|+++..++.++
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De----~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A   79 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDE----NVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRA   79 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCC----ceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHH
Confidence            56999999999999999999987433    133456667777654321          1245678999999998776665


Q ss_pred             h-------cCCCEEEEcccccCCccc------------------------------cccCcchhhhhhHHHHHHHHHHHH
Q 044498           94 T-------SGVDNMSNLAADMGGMGF------------------------------IQSNHSVIMYKNTTISFDMLEAAR  136 (366)
Q Consensus        94 ~-------~~~d~vi~~a~~~~~~~~------------------------------~~~~~~~~~~~nv~~~~~ll~a~~  136 (366)
                      .       +..|.|+-+||....+.-                              +.++-...++.|+.|...+++...
T Consensus        80 ~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~  159 (341)
T KOG1478|consen   80 SKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELE  159 (341)
T ss_pred             HHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhh
Confidence            3       468999999997643211                              111223458889998887777665


Q ss_pred             HcC--CCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 044498          137 MNG--VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK  194 (366)
Q Consensus       137 ~~~--~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~  194 (366)
                      ..-  -+.+++|.+||...=...  .    .-++........+|..||.+.+.+.....+
T Consensus       160 pll~~~~~~~lvwtSS~~a~kk~--l----sleD~q~~kg~~pY~sSKrl~DlLh~A~~~  213 (341)
T KOG1478|consen  160 PLLCHSDNPQLVWTSSRMARKKN--L----SLEDFQHSKGKEPYSSSKRLTDLLHVALNR  213 (341)
T ss_pred             hHhhcCCCCeEEEEeeccccccc--C----CHHHHhhhcCCCCcchhHHHHHHHHHHHhc
Confidence            531  111379999995321111  1    111111345677899999998865544433

>PRK09620 hypothetical protein; Provisional

Probab=98.49  E-value=3.3e-07  Score=80.15  Aligned_cols=78  Identities=18%  Similarity=0.038  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCC----------------CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEcc
Q 044498           22 GKLRISSIGVG----------------GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVD   83 (366)
Q Consensus        22 ~~~~vlItGat----------------G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D   83 (366)
                      ++++||||+|.                ||+|++|+++|+++|++         |+++++.......  .....+..+.++
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~---------V~li~g~~~~~~~~~~~~~~~~~V~s~   72 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH---------VIYLHGYFAEKPNDINNQLELHPFEGI   72 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe---------EEEEeCCCcCCCcccCCceeEEEEecH
Confidence            56899999886                99999999999999999         9988864331111  112223445554


Q ss_pred             CCChhHHHhhhc--CCCEEEEcccccC
Q 044498           84 LRVMDNCLRMTS--GVDNMSNLAADMG  108 (366)
Q Consensus        84 ~~~~~~l~~~~~--~~d~vi~~a~~~~  108 (366)
                      ....+.+.+++.  ++|+|||+||...
T Consensus        73 ~d~~~~l~~~~~~~~~D~VIH~AAvsD   99 (229)
T PRK09620         73 IDLQDKMKSIITHEKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHHHHhcccCCCEEEECccccc
Confidence            444456777774  6999999999753

>PRK05086 malate dehydrogenase; Provisional

Probab=98.47  E-value=1.6e-06  Score=79.60  Aligned_cols=111  Identities=13%  Similarity=-0.018  Sum_probs=78.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHH-c--CCCCCCCCCccEEEEEeCCCccc---ccccccc-ceEEEccCCChhHHHhhhcC
Q 044498           24 LRISSIGVGGFIPSNIARRLKS-E--RHYSTSIPNALYIIASDWNKNEH---MMEDMFC-HEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~-~--g~~~~~~~~~~~V~~~~r~~~~~---~~~~~~~-v~~~~~D~~~~~~l~~~~~~   96 (366)
                      |||+|+||||.||++++..|.. .  +++         +.++++++...   ......+ ...+.+  .+.+++.+.+++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~e---------l~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSE---------LSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccE---------EEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCC
Confidence            6899999999999999998855 2  356         78888764321   1111101 112222  223344556788


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +|+||.++|...   ....+....+..|.....++++++.+++.+  ++|.+.|
T Consensus        70 ~DiVIitaG~~~---~~~~~R~dll~~N~~i~~~ii~~i~~~~~~--~ivivvs  118 (312)
T PRK05086         70 ADVVLISAGVAR---KPGMDRSDLFNVNAGIVKNLVEKVAKTCPK--ACIGIIT  118 (312)
T ss_pred             CCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEcc
Confidence            999999999654   223456778999999999999999999988  8888777

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.43  E-value=9.7e-07  Score=77.43  Aligned_cols=74  Identities=9%  Similarity=-0.068  Sum_probs=50.2

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC--hhHHHhhhcCCCEEEE
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV--MDNCLRMTSGVDNMSN  102 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~--~~~l~~~~~~~d~vi~  102 (366)
                      |.+=-.+|||+|++|+++|+++|++         |++++|....... ...++.++.++..+  .+.+.+.+.++|+|||
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~---------V~li~r~~~~~~~-~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh   87 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHE---------VTLVTTKTAVKPE-PHPNLSIIEIENVDDLLETLEPLVKDHDVLIH   87 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCE---------EEEEECcccccCC-CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEe
Confidence            3333367999999999999999999         9999875432111 12234665543322  2345556678999999


Q ss_pred             cccccC
Q 044498          103 LAADMG  108 (366)
Q Consensus       103 ~a~~~~  108 (366)
                      +||...
T Consensus        88 ~AAvsd   93 (229)
T PRK06732         88 SMAVSD   93 (229)
T ss_pred             CCccCC
Confidence            999653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.39  E-value=1e-06  Score=71.21  Aligned_cols=205  Identities=14%  Similarity=0.082  Sum_probs=128.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++...|||||...+|...+++|.++|..         |..++-...+...   +...++.|...|++++.++..++.   
T Consensus         8 kglvalvtggasglg~ataerlakqgas---------v~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak   78 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGAS---------VALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAK   78 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCce---------EEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHH
Confidence            4557899999999999999999999999         9999876554332   233456899999999988887763   


Q ss_pred             ----CCCEEEEcccccCCcc-cc-----c---cCcchhhhhhHHHHHHHHHHHHH--------cCCCcee--EEEEeccc
Q 044498           96 ----GVDNMSNLAADMGGMG-FI-----Q---SNHSVIMYKNTTISFDMLEAARM--------NGVMSLT--FFFVSSAC  152 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~-~~-----~---~~~~~~~~~nv~~~~~ll~a~~~--------~~~~~~r--~I~~SS~~  152 (366)
                          +.|..+||||+.-... ++     .   .+-...+++|+.++.|+++....        .+.+  |  +|.+.|.+
T Consensus        79 ~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gq--rgviintasva  156 (260)
T KOG1199|consen   79 AKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQ--RGVIINTASVA  156 (260)
T ss_pred             hhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCc--ceEEEeeceee
Confidence                5899999999763211 00     1   11233477899999998876542        1222  3  45555554


Q ss_pred             ccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCc-----H---HHHHHHHHhCCCC
Q 044498          153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKA-----P---AAFSRKAVTSTDN  221 (366)
Q Consensus       153 vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~-----~---~~~~~~~~~~~~~  221 (366)
                      .|...               -....|..||...--+..-.++++   |+++..+-++.     +   +.-+..++.+.-+
T Consensus       157 afdgq---------------~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ip  221 (260)
T KOG1199|consen  157 AFDGQ---------------TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIP  221 (260)
T ss_pred             eecCc---------------cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCC
Confidence            44332               235568888876555544444443   67776663321     1   2222233332222


Q ss_pred             eEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEecC
Q 044498          222 FEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGS  260 (366)
Q Consensus       222 ~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~  260 (366)
                      ++  .      .+-|....+..+..+++++  .++++.+.+
T Consensus       222 fp--s------rlg~p~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  222 FP--S------RLGHPHEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             Cc--h------hcCChHHHHHHHHHHHhCcccCCeEEEecc
Confidence            11  1      1345666777777777776  567666643

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.32  E-value=1.5e-06  Score=82.84  Aligned_cols=90  Identities=22%  Similarity=0.154  Sum_probs=68.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC-C-CCCCCCCccEEEEEeCCCcccccc----ccccceEEEccCCChhHHHhhhcCCCE
Q 044498           26 ISSIGVGGFIPSNIARRLKSER-H-YSTSIPNALYIIASDWNKNEHMME----DMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g-~-~~~~~~~~~~V~~~~r~~~~~~~~----~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      |+|+|| |++|+.+++.|.+.+ + +         |++.+|+..+....    ...+++.+.+|+.|.+++.++++++|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~---------v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEE---------VTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-E---------EEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCc---------EEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCE
Confidence            799999 999999999999875 3 6         99999987753222    345789999999999999999999999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      ||||++..                   ....++++|.+.++   ++|=
T Consensus        71 Vin~~gp~-------------------~~~~v~~~~i~~g~---~yvD   96 (386)
T PF03435_consen   71 VINCAGPF-------------------FGEPVARACIEAGV---HYVD   96 (386)
T ss_dssp             EEE-SSGG-------------------GHHHHHHHHHHHT----EEEE
T ss_pred             EEECCccc-------------------hhHHHHHHHHHhCC---Ceec
Confidence            99999942                   23468888888887   4664

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.29  E-value=5.9e-06  Score=77.78  Aligned_cols=105  Identities=14%  Similarity=0.124  Sum_probs=67.1

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVD   98 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d   98 (366)
                      .++|||.|+||||++|+.|++.|.+. +++         |..+.+..................|+.+.+.++.. ++++|
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~e---------l~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~D  106 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFE---------ITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVD  106 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCe---------EEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCC
Confidence            36789999999999999999999887 567         88887643322111111112233444433333322 57899


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCC
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~  157 (366)
                      +||.+.+.                   ....+++.++ +.+.   ++|-.|+.+-+.+.
T Consensus       107 vVf~Alp~-------------------~~s~~i~~~~-~~g~---~VIDlSs~fRl~~~  142 (381)
T PLN02968        107 AVFCCLPH-------------------GTTQEIIKAL-PKDL---KIVDLSADFRLRDI  142 (381)
T ss_pred             EEEEcCCH-------------------HHHHHHHHHH-hCCC---EEEEcCchhccCCc
Confidence            99987762                   2456677766 3454   79999997766543

>cd00704 MDH Malate dehydrogenase

Probab=98.26  E-value=9.2e-06  Score=74.90  Aligned_cols=113  Identities=15%  Similarity=0.048  Sum_probs=76.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh-----------hHHHhh
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM-----------DNCLRM   93 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~-----------~~l~~~   93 (366)
                      ||.||||+|.||+.++..|..+|.-..  +....+..+++..+...      .+....|+.|.           ....+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~--~~~~~l~L~Di~~~~~~------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~   73 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGD--DQPVILHLLDIPPAMKA------LEGVVMELQDCAFPLLKGVVITTDPEEA   73 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCC--CCceEEEEEecCCccCc------cceeeeehhhhcccccCCcEEecChHHH
Confidence            799999999999999999987653100  01112777777652100      12233333332           234466


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEe
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVS  149 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~S  149 (366)
                      ++++|+|||+||...   ....+..+.+..|+...+.+.....+++ .. ..+|.+|
T Consensus        74 ~~~aDiVVitAG~~~---~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~-~iiivvs  126 (323)
T cd00704          74 FKDVDVAILVGAFPR---KPGMERADLLRKNAKIFKEQGEALNKVAKPT-VKVLVVG  126 (323)
T ss_pred             hCCCCEEEEeCCCCC---CcCCcHHHHHHHhHHHHHHHHHHHHHhCCCC-eEEEEeC
Confidence            789999999999653   3345677889999999999999999984 44 2455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.21  E-value=3.1e-05  Score=72.05  Aligned_cols=77  Identities=13%  Similarity=-0.002  Sum_probs=57.4

Q ss_pred             CCCCeEEEEcCCCchhHH--HHHHHHHcCCCCCCCCCccEEEEEeCCCcc-c-------------c----ccccccceEE
Q 044498           21 SGKLRISSIGVGGFIPSN--IARRLKSERHYSTSIPNALYIIASDWNKNE-H-------------M----MEDMFCHEFH   80 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~--l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-~-------------~----~~~~~~v~~~   80 (366)
                      ..++++||||+++.+|.+  +++.| +.|.+         |+++++.... .             .    ......+..+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~---------Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i  108 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD---------TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSI  108 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe---------EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEE
Confidence            456899999999999999  89999 99998         8888753211 0             0    0111224578


Q ss_pred             EccCCChhHHHhhhc-------CCCEEEEccccc
Q 044498           81 LVDLRVMDNCLRMTS-------GVDNMSNLAADM  107 (366)
Q Consensus        81 ~~D~~~~~~l~~~~~-------~~d~vi~~a~~~  107 (366)
                      .+|+++.+.+.++++       ++|++||++|..
T Consensus       109 ~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        109 NGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             EcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            999999887766543       699999999965

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.19  E-value=1.2e-05  Score=74.07  Aligned_cols=160  Identities=12%  Similarity=0.100  Sum_probs=100.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-cc-----cccccceEE-EccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-MM-----EDMFCHEFH-LVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~~-----~~~~~v~~~-~~D~~~~~~l~~~~~   95 (366)
                      .+||.|+|++|.||+.++..|...|.-.+  +....+..++...+.. ..     ..+....+. ...+.  ......++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~--~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~   77 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGP--DQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFK   77 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCC--CCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhC
Confidence            46899999999999999999998774211  1111188888754321 10     011000000 00111  11234478


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC-CceeEEEEeccc---ccCCCCCCCCCcccccCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV-MSLTFFFVSSAC---IYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~r~I~~SS~~---vyg~~~~~~~~~~e~~~~~  171 (366)
                      ++|+||.+||...   ....+..+.+..|+...+.+.....+++. . ..+|.+|-..   +|-..       ..   .+
T Consensus        78 daDivvitaG~~~---k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~-~iiivvsNPvD~~t~~~~-------k~---sg  143 (322)
T cd01338          78 DADWALLVGAKPR---GPGMERADLLKANGKIFTAQGKALNDVASRD-VKVLVVGNPCNTNALIAM-------KN---AP  143 (322)
T ss_pred             CCCEEEEeCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCC-eEEEEecCcHHHHHHHHH-------HH---cC
Confidence            9999999999643   23446777899999999999999999874 4 3555555310   00000       00   12


Q ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHcCCcE
Q 044498          172 -AEPQDAYGLEKLATEGLCKHYTKDFEIEC  200 (366)
Q Consensus       172 -~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~  200 (366)
                       ..+...||.+++..+++...+++.++++.
T Consensus       144 ~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~  173 (322)
T cd01338         144 DIPPDNFTAMTRLDHNRAKSQLAKKAGVPV  173 (322)
T ss_pred             CCChHheEEehHHHHHHHHHHHHHHhCcCh
Confidence             44577899999999999999999988764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.16  E-value=2.1e-05  Score=72.66  Aligned_cols=113  Identities=14%  Similarity=0.027  Sum_probs=74.7

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh-----------HHHhh
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD-----------NCLRM   93 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~-----------~l~~~   93 (366)
                      ||.|+||+|.+|++++..|...+.-  ..+.++.+..+++.++....      +....|+.|..           .....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~--~~~~e~el~LiD~~~~~~~a------~g~~~Dl~d~~~~~~~~~~~~~~~~~~   72 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRML--GKDQPIILHLLDIPPAMKVL------EGVVMELMDCAFPLLDGVVPTHDPAVA   72 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhcccc--CCCCccEEEEEecCCccccc------ceeEeehhcccchhcCceeccCChHHH
Confidence            6899999999999999999876531  00011128888875543110      22233333322           23456


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEe
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVS  149 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~S  149 (366)
                      ++++|+||++||...   ....+..+.+..|+...+.+.....+++ .+ ..+|.+|
T Consensus        73 ~~~aDiVVitAG~~~---~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~-~iiivvs  125 (324)
T TIGR01758        73 FTDVDVAILVGAFPR---KEGMERRDLLSKNVKIFKEQGRALDKLAKKD-CKVLVVG  125 (324)
T ss_pred             hCCCCEEEEcCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCC-eEEEEeC
Confidence            789999999999643   2233567789999999999999999984 44 2455555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.09  E-value=1.4e-05  Score=74.00  Aligned_cols=102  Identities=18%  Similarity=0.094  Sum_probs=61.7

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      |.+|++|+|+||||++|+.|++.|.+++|..      ..+..+.............+   ...++.+.+.. + ++++|+
T Consensus         1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~------~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~-~-~~~vD~   69 (336)
T PRK05671          1 MSQPLDIAVVGATGTVGEALVQILEERDFPV------GTLHLLASSESAGHSVPFAG---KNLRVREVDSF-D-FSQVQL   69 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhhCCCCc------eEEEEEECcccCCCeeccCC---cceEEeeCChH-H-hcCCCE
Confidence            3466899999999999999999999877751      11334432221110001111   23444333322 2 478999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ++.+++.                   .....++..+.+.|+   ++|=.|+..-+
T Consensus        70 vFla~p~-------------------~~s~~~v~~~~~~G~---~VIDlS~~fR~  102 (336)
T PRK05671         70 AFFAAGA-------------------AVSRSFAEKARAAGC---SVIDLSGALPS  102 (336)
T ss_pred             EEEcCCH-------------------HHHHHHHHHHHHCCC---eEEECchhhcC
Confidence            9987762                   223447777777777   58888886543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.09  E-value=7.1e-06  Score=70.26  Aligned_cols=75  Identities=13%  Similarity=0.031  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      +.++++|+||+|.+|+.+++.|.+.|++         |++++|+..+....     ...+..+..+|..+.+++.+.+++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~---------V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   97 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGAR---------VVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG   97 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc
Confidence            5689999999999999999999999998         99998875432111     112345667788888888888999


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||++++
T Consensus        98 ~diVi~at~  106 (194)
T cd01078          98 ADVVFAAGA  106 (194)
T ss_pred             CCEEEECCC
Confidence            999998766

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.04  E-value=3.5e-05  Score=62.25  Aligned_cols=108  Identities=14%  Similarity=0.088  Sum_probs=73.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccccc----c----cccceEEEccCCChhHHHhh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMME----D----MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~----~----~~~v~~~~~D~~~~~~l~~~   93 (366)
                      |||.|+|++|.+|++++..|...+  .+         +..+++........    .    .......... .++    +.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~e---------i~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~----~~   66 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADE---------IVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDY----EA   66 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSE---------EEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSG----GG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCc---------eEEeccCcccceeeehhhhhhhhhccccccccc-ccc----cc
Confidence            689999999999999999999886  45         88998875421110    0    0001111111 223    34


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ++++|+||-+||...   ....+..+.+..|....+.+.+...+++.+ ..+|.+|
T Consensus        67 ~~~aDivvitag~~~---~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~-~~vivvt  118 (141)
T PF00056_consen   67 LKDADIVVITAGVPR---KPGMSRLDLLEANAKIVKEIAKKIAKYAPD-AIVIVVT  118 (141)
T ss_dssp             GTTESEEEETTSTSS---STTSSHHHHHHHHHHHHHHHHHHHHHHSTT-SEEEE-S
T ss_pred             cccccEEEEeccccc---cccccHHHHHHHhHhHHHHHHHHHHHhCCc-cEEEEeC
Confidence            678999999999643   233467778999999999999999999855 2344443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.98  E-value=5.6e-05  Score=70.33  Aligned_cols=97  Identities=18%  Similarity=0.097  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |++|+|+||||++|+.|++.|.+++|..      +.+..+.+...........+......|+.+.     .++++|+||.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~------~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~   69 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPV------DKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALF   69 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCc------ceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEE
Confidence            5799999999999999999999988751      1156666543322211111224444455432     2468999998


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      +++                   ...+..+...+.+.|.   ++|=.|+..
T Consensus        70 A~g-------------------~g~s~~~~~~~~~~G~---~VIDlS~~~   97 (334)
T PRK14874         70 SAG-------------------GSVSKKYAPKAAAAGA---VVIDNSSAF   97 (334)
T ss_pred             CCC-------------------hHHHHHHHHHHHhCCC---EEEECCchh
Confidence            887                   2334556666666665   477677753

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.97  E-value=7.7e-06  Score=75.34  Aligned_cols=71  Identities=14%  Similarity=0.087  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-C-CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-R-HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g-~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      .+++|+||||+|+||+.++++|.++ | .+         +++++|+..+......   ++..+++.   .+.+++.++|+
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~---------lilv~R~~~rl~~La~---el~~~~i~---~l~~~l~~aDi  218 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAE---------LLLVARQQERLQELQA---ELGGGKIL---SLEEALPEADI  218 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCE---------EEEEcCCHHHHHHHHH---HhccccHH---hHHHHHccCCE
Confidence            6689999999999999999999864 5 46         8888886543322211   22234443   35677889999


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      |||+++..
T Consensus       219 Vv~~ts~~  226 (340)
T PRK14982        219 VVWVASMP  226 (340)
T ss_pred             EEECCcCC
Confidence            99999964

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.95  E-value=2.6e-05  Score=73.82  Aligned_cols=73  Identities=14%  Similarity=0.011  Sum_probs=57.6

Q ss_pred             CCCeEEEEcC----------------CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC
Q 044498           22 GKLRISSIGV----------------GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~   85 (366)
                      ++++||||||                +|.+|.++++.|.++|++         |+++++.....  . ..  .+...|++
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~---------V~~v~~~~~~~--~-~~--~~~~~dv~  252 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD---------VTLVSGPVNLP--T-PA--GVKRIDVE  252 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE---------EEEeCCCcccc--C-CC--CcEEEccC
Confidence            6789999999                999999999999999999         99998765321  1 11  24467888


Q ss_pred             ChhHHHhhh----cCCCEEEEcccccC
Q 044498           86 VMDNCLRMT----SGVDNMSNLAADMG  108 (366)
Q Consensus        86 ~~~~l~~~~----~~~d~vi~~a~~~~  108 (366)
                      +.+++.+.+    .++|++||+||...
T Consensus       253 ~~~~~~~~v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        253 SAQEMLDAVLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             CHHHHHHHHHHhcCCCCEEEEcccccc
Confidence            887776655    46999999999753

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.94  E-value=0.00048  Score=58.82  Aligned_cols=211  Identities=14%  Similarity=0.089  Sum_probs=121.1

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc--c---ccccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN--E---HMMEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~--~---~~~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++||+|-.  --|+..+++.|.++|.+         +......+.  +   .........-++.+|+++.+.+...+
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe---------L~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f   75 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAEQGAE---------LAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALF   75 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHHcCCE---------EEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHH
Confidence            67899999975  46999999999999998         665543331  1   11111111247899999998877765


Q ss_pred             c-------CCCEEEEcccccCCc----cccccCcch---hhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGM----GFIQSNHSV---IMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~----~~~~~~~~~---~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      .       +.|.++|+.+.....    .+.....+.   .+++.......+.++++..=..+..+|-++=   +|.....
T Consensus        76 ~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY---lgs~r~v  152 (259)
T COG0623          76 ATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY---LGSERVV  152 (259)
T ss_pred             HHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe---ccceeec
Confidence            3       699999999966421    111111111   2334444555666666653110013443221   2211111


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHH-------HHHHHhCCCCeEEecCCcc
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAF-------SRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~-------~~~~~~~~~~~~i~~~~~~  230 (366)
                                  .-.+.-|..|+..|..++..+.+.   |+++.-+-.+++..+       +..+++..+.      ...
T Consensus       153 ------------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~------~aP  214 (259)
T COG0623         153 ------------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEA------NAP  214 (259)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHh------hCC
Confidence                        124567899999999999888876   455555533332211       1222221110      111


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+.-+.++||+...+.++..-    .+++.++.+|-
T Consensus       215 l~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         215 LRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             ccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCc
Confidence            223356899998888887552    57888887764

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.83  E-value=4.2e-05  Score=67.04  Aligned_cols=69  Identities=12%  Similarity=0.065  Sum_probs=47.9

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-------cCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-------SGV   97 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-------~~~   97 (366)
                      |.+=-.++|.||.++++.|.++|++         |+++++....  ...    ....+|+.+.+.+.+++       .++
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~---------Vvlv~~~~~l--~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHE---------VTLVTTKRAL--KPE----PHPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCE---------EEEEcChhhc--ccc----cCCcceeecHHHHHHHHHHHHHHcCCC
Confidence            4444456999999999999999999         9988753211  110    12346777766555432       468


Q ss_pred             CEEEEcccccC
Q 044498           98 DNMSNLAADMG  108 (366)
Q Consensus        98 d~vi~~a~~~~  108 (366)
                      |++||+||...
T Consensus        82 DiLVnnAgv~d   92 (227)
T TIGR02114        82 DILIHSMAVSD   92 (227)
T ss_pred             CEEEECCEecc
Confidence            99999999653

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.83  E-value=0.00014  Score=63.67  Aligned_cols=72  Identities=19%  Similarity=0.231  Sum_probs=61.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      |+++|.|+ |-+|..+++.|.++|++         |+++++.+.....  ........+.+|-++++.|+++ +.++|++
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~---------Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~v   70 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHN---------VVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAV   70 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCc---------eEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEE
Confidence            67999995 99999999999999999         9999998876554  2225568999999999999998 7899999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      +-+.+
T Consensus        71 va~t~   75 (225)
T COG0569          71 VAATG   75 (225)
T ss_pred             EEeeC
Confidence            96666

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.79  E-value=4.6e-05  Score=68.90  Aligned_cols=73  Identities=12%  Similarity=0.068  Sum_probs=56.8

Q ss_pred             eEEEEcCCCchhHHHHHHHHHc----CCCCCCCCCccEEEEEeCCCcccc-----------ccccccceEEEccCCChhH
Q 044498           25 RISSIGVGGFIPSNIARRLKSE----RHYSTSIPNALYIIASDWNKNEHM-----------MEDMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~----g~~~~~~~~~~~V~~~~r~~~~~~-----------~~~~~~v~~~~~D~~~~~~   89 (366)
                      .+.|.|||||-|.++++++.+.    |..         +-+..|+..+..           ...... .++.+|..|+++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~s---------lavAGRn~~KL~~vL~~~~~k~~~~ls~~-~i~i~D~~n~~S   76 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLS---------LAVAGRNEKKLQEVLEKVGEKTGTDLSSS-VILIADSANEAS   76 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCce---------EEEecCCHHHHHHHHHHHhhccCCCcccc-eEEEecCCCHHH
Confidence            5899999999999999999983    444         666667654311           001122 388999999999


Q ss_pred             HHhhhcCCCEEEEccccc
Q 044498           90 CLRMTSGVDNMSNLAADM  107 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~  107 (366)
                      +.++.+.+.+|+||+|..
T Consensus        77 l~emak~~~vivN~vGPy   94 (423)
T KOG2733|consen   77 LDEMAKQARVIVNCVGPY   94 (423)
T ss_pred             HHHHHhhhEEEEeccccc
Confidence            999999999999999964

>PRK05442 malate dehydrogenase; Provisional

Probab=97.75  E-value=0.0003  Score=64.98  Aligned_cols=124  Identities=13%  Similarity=0.031  Sum_probs=76.3

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-ccc-----ccccceEE-EccCCChhHHHh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-MME-----DMFCHEFH-LVDLRVMDNCLR   92 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~~~-----~~~~v~~~-~~D~~~~~~l~~   92 (366)
                      |..++||.|+|++|.+|+.++..|...|.-.+..+.+  +..++..+... ...     .+....+. ...++  .....
T Consensus         1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~e--l~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~   76 (326)
T PRK05442          1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVI--LQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNV   76 (326)
T ss_pred             CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccE--EEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHH
Confidence            4566799999999999999999998876421111111  88888754321 110     11000000 00111  12234


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      .++++|+||-+||...   ....+..+.+..|....+.+.....++..++..+|.+|-
T Consensus        77 ~~~daDiVVitaG~~~---k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         77 AFKDADVALLVGARPR---GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HhCCCCEEEEeCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            4679999999999542   234577888999999999999999995522125666553

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.73  E-value=0.00023  Score=65.48  Aligned_cols=115  Identities=16%  Similarity=0.028  Sum_probs=72.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc-ccccccccc------ceEEEccCCChhHHHhhhcC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN-EHMMEDMFC------HEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~-~~~~~~~~~------v~~~~~D~~~~~~l~~~~~~   96 (366)
                      |||.|+|+||++|..++..|+..|+.       -.|+++++... .........      .......+.-..+.. .+++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~-------~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~-~l~~   72 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVV-------KEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-DVAG   72 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC-------CEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH-HhCC
Confidence            68999999999999999999998852       01888888441 111000000      000001111111122 3789


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +|+||-++|...   ....+....+..|+.....+.+...+.+.+ ..+|.+++
T Consensus        73 aDiViitag~p~---~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~-~~viv~~n  122 (309)
T cd05294          73 SDIVIITAGVPR---KEGMSRLDLAKKNAKIVKKYAKQIAEFAPD-TKILVVTN  122 (309)
T ss_pred             CCEEEEecCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEeCC
Confidence            999999999542   222344677889999999999998887644 35666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.71  E-value=0.00017  Score=56.67  Aligned_cols=92  Identities=15%  Similarity=0.169  Sum_probs=54.3

Q ss_pred             eEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEE-EeCCCcccc--ccccc-cceEEEccC--CChhHHHhhhcCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIA-SDWNKNEHM--MEDMF-CHEFHLVDL--RVMDNCLRMTSGV   97 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~-~~r~~~~~~--~~~~~-~v~~~~~D~--~~~~~l~~~~~~~   97 (366)
                      ||.|+||||++|+.|++.|.+. ..+         +.. +++......  ..... .-.+....+  .+.+.    +.++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   67 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFE---------LVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDV   67 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEE---------EEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCcc---------EEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcC
Confidence            6999999999999999998884 234         444 344431111  11000 001112222  22332    3789


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      |+||.|.+                   -.....+...+.+.|+   ++|=.|+.
T Consensus        68 Dvvf~a~~-------------------~~~~~~~~~~~~~~g~---~ViD~s~~   99 (121)
T PF01118_consen   68 DVVFLALP-------------------HGASKELAPKLLKAGI---KVIDLSGD   99 (121)
T ss_dssp             SEEEE-SC-------------------HHHHHHHHHHHHHTTS---EEEESSST
T ss_pred             CEEEecCc-------------------hhHHHHHHHHHhhCCc---EEEeCCHH
Confidence            99999877                   3445677777778887   47766664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.71  E-value=0.00025  Score=64.86  Aligned_cols=113  Identities=12%  Similarity=0.021  Sum_probs=75.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc--ccccc-eEEEccCCChhHHHhhhcCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME--DMFCH-EFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v-~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      |||.|+|++|.+|++++..|..++.  +         +..++.+.......  ..... ..+.+ ....+++.+.++++|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~e---------lvLiDi~~a~g~alDL~~~~~~~~i~~-~~~~~~~y~~~~daD   70 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSE---------LALYDIVNTPGVAADLSHINTPAKVTG-YLGPEELKKALKGAD   70 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcE---------EEEEecCccceeehHhHhCCCcceEEE-ecCCCchHHhcCCCC
Confidence            5899999999999999999988873  5         78887662111111  11100 01111 101122345578999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +||-+||...   ....+..+.+..|......+.+...+++.+ ..+|.+|-
T Consensus        71 ivvitaG~~~---k~g~tR~dll~~N~~i~~~i~~~i~~~~p~-a~vivvtN  118 (310)
T cd01337          71 VVVIPAGVPR---KPGMTRDDLFNINAGIVRDLATAVAKACPK-ALILIISN  118 (310)
T ss_pred             EEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEccC
Confidence            9999999642   234567888999999999999999998765 34555543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.64  E-value=0.00044  Score=63.78  Aligned_cols=121  Identities=13%  Similarity=0.044  Sum_probs=75.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-ccc-----ccccceEEEccCCChhHHHhhhcC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-MME-----DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~~~-----~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ..||.|+|++|++|++++..|+.+|.-  ..+....+..++...... ...     .+.. .....+..-.......+++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~--~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~-~~~~~~~~i~~~~~~~~~d   79 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELF--GKDQPVVLHLLDIPPAMKALEGVAMELEDCA-FPLLAGVVATTDPEEAFKD   79 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcc--cCCCccEEEEEecCCcccccchHHHHHhhcc-ccccCCcEEecChHHHhCC
Confidence            458999999999999999999987742  111111288888754221 110     1000 0000011000122344689


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +|+||.+||...   ....+..+.+..|....+.+...+.+++.++..+|.+|
T Consensus        80 aDvVVitAG~~~---k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        80 VDAALLVGAFPR---KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             CCEEEEeCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            999999999642   33457788899999999999999999876223455554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.64  E-value=0.00044  Score=61.87  Aligned_cols=84  Identities=12%  Similarity=0.209  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEE-EeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIA-SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~-~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ||||+|+|++|.+|+.+++.+.+. +.+         +.+ +++........       -..++...+++.++++++|+|
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~e---------lvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvV   64 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLE---------LVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVL   64 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCE---------EEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEE
Confidence            479999999999999999888764 566         665 44443322111       112333334566666789999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      |+++.                   ......++..|.++|+.
T Consensus        65 id~t~-------------------p~~~~~~~~~al~~G~~   86 (257)
T PRK00048         65 IDFTT-------------------PEATLENLEFALEHGKP   86 (257)
T ss_pred             EECCC-------------------HHHHHHHHHHHHHcCCC
Confidence            98886                   23346688888888875

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.63  E-value=0.00029  Score=65.79  Aligned_cols=100  Identities=15%  Similarity=0.153  Sum_probs=60.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccc--cccccccce-EEEccCCChhHHHhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEH--MMEDMFCHE-FHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~--~~~~~~~v~-~~~~D~~~~~~l~~~~~~~   97 (366)
                      +|+||+|+||||++|+.+++.|.+. +++         +..+.+.....  .......+. ....++.+.+..  .+.++
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~e---------lv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~v   69 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNHPEVE---------IVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGA   69 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcCCCce---------EEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCC
Confidence            3689999999999999999999875 566         76665532211  111111011 112233343332  34679


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      |+|+-|...                   .....+...+.+.|+   ++|=.|+..-+
T Consensus        70 D~Vf~alP~-------------------~~~~~~v~~a~~aG~---~VID~S~~fR~  104 (343)
T PRK00436         70 DVVFLALPH-------------------GVSMDLAPQLLEAGV---KVIDLSADFRL  104 (343)
T ss_pred             CEEEECCCc-------------------HHHHHHHHHHHhCCC---EEEECCcccCC
Confidence            999987662                   234456666666665   68888876544

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.61  E-value=0.00019  Score=67.74  Aligned_cols=104  Identities=8%  Similarity=-0.098  Sum_probs=70.9

Q ss_pred             CCCeEEEEcC----------------CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC
Q 044498           22 GKLRISSIGV----------------GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~   85 (366)
                      ++++||||||                ||.+|.++++.|..+|++         |+.+.+......   ..  .....|+.
T Consensus       184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~---------V~~~~g~~~~~~---~~--~~~~~~v~  249 (390)
T TIGR00521       184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGAD---------VTLITGPVSLLT---PP--GVKSIKVS  249 (390)
T ss_pred             CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCE---------EEEeCCCCccCC---CC--CcEEEEec
Confidence            6789999998                478999999999999999         999886653321   11  23557888


Q ss_pred             ChhHH-Hhhh----cCCCEEEEcccccCCccccc--cC---cchhhhhhHHHHHHHHHHHHHcC
Q 044498           86 VMDNC-LRMT----SGVDNMSNLAADMGGMGFIQ--SN---HSVIMYKNTTISFDMLEAARMNG  139 (366)
Q Consensus        86 ~~~~l-~~~~----~~~d~vi~~a~~~~~~~~~~--~~---~~~~~~~nv~~~~~ll~a~~~~~  139 (366)
                      +.+++ .+++    .++|++|++||.........  ..   ....+..|+.-+..+++..++..
T Consensus       250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       250 TAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             cHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            88776 4333    36899999999764311110  00   01223456677788888887654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.60  E-value=0.00014  Score=65.24  Aligned_cols=78  Identities=15%  Similarity=0.050  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      +-..++|.|||||.|..++++|..+|.+         -..-.|+..+-... ...+-++-...+-+++.+.+++.+.++|
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~---------~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VV   75 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLT---------AALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVV   75 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCc---------hhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEE
Confidence            3356999999999999999999999988         65556665432211 1223355555666688999999999999


Q ss_pred             EEcccccC
Q 044498          101 SNLAADMG  108 (366)
Q Consensus       101 i~~a~~~~  108 (366)
                      +||+|...
T Consensus        76 lncvGPyt   83 (382)
T COG3268          76 LNCVGPYT   83 (382)
T ss_pred             Eecccccc
Confidence            99999754

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.60  E-value=0.0003  Score=68.52  Aligned_cols=72  Identities=13%  Similarity=0.095  Sum_probs=59.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhh-hcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRM-TSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~-~~~~d~vi  101 (366)
                      |+|+|+|+ |.+|+++++.|.++|++         |+++++++....... ..++.++.+|.++...+.++ ++++|.||
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~---------v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi   70 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENND---------VTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLI   70 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCc---------EEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEE
Confidence            58999997 99999999999999999         999998766433322 24578999999999988887 78899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus        71 ~~~~   74 (453)
T PRK09496         71 AVTD   74 (453)
T ss_pred             EecC
Confidence            6654

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.55  E-value=0.00035  Score=55.08  Aligned_cols=94  Identities=18%  Similarity=0.262  Sum_probs=57.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEE-EEeCCCccccccc---cccceEEEccCCChhHHHhhhcCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYII-ASDWNKNEHMMED---MFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~-~~~r~~~~~~~~~---~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      |||+|+|++|.+|+.+++.+.+ .+++         +. ++++.........   ..+..  ...+.-.+++.++++.+|
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~---------lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~D   69 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFE---------LVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEAD   69 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEE---------EEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcE---------EEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCC
Confidence            5899999999999999999999 5777         55 4555552211110   00001  111111245677777799


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ++|.+..                   .......++.+.+++++   +|.-+|
T Consensus        70 VvIDfT~-------------------p~~~~~~~~~~~~~g~~---~ViGTT   99 (124)
T PF01113_consen   70 VVIDFTN-------------------PDAVYDNLEYALKHGVP---LVIGTT   99 (124)
T ss_dssp             EEEEES--------------------HHHHHHHHHHHHHHT-E---EEEE-S
T ss_pred             EEEEcCC-------------------hHHhHHHHHHHHhCCCC---EEEECC
Confidence            9998874                   55667788888888874   554333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.53  E-value=0.00099  Score=61.42  Aligned_cols=107  Identities=15%  Similarity=0.047  Sum_probs=74.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----cc-----ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----DM-----FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----~~-----~~v~~~~~D~~~~~~l   90 (366)
                      ..+||.|+|+ |.+|+.++..|...|.  +         +..++++.......    ..     ..+.+..   .+.   
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~e---------l~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~---   68 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADE---------LVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY---   68 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH---
Confidence            4469999998 9999999999998875  6         88888765432110    00     1112221   222   


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       +.++++|+||.+||...   ....+..+.+..|....+.+++.+.+++.+ .++|.+|
T Consensus        69 -~~~~~adivIitag~~~---k~g~~R~dll~~N~~i~~~i~~~i~~~~~~-~~vivvs  122 (315)
T PRK00066         69 -SDCKDADLVVITAGAPQ---KPGETRLDLVEKNLKIFKSIVGEVMASGFD-GIFLVAS  122 (315)
T ss_pred             -HHhCCCCEEEEecCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEcc
Confidence             23689999999999642   233566788999999999999999988765 2455444

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.50  E-value=0.00063  Score=63.36  Aligned_cols=95  Identities=13%  Similarity=0.153  Sum_probs=58.4

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEcc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLA  104 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a  104 (366)
                      +|+|+||||++|+.|++.|.+++|....      +..+.+...........+...+..|+..     ..+.++|+||.++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~------l~~~as~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~D~v~~a~   69 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDK------LVLLASDRSAGRKVTFKGKELEVNEAKI-----ESFEGIDIALFSA   69 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhh------EEEEeccccCCCeeeeCCeeEEEEeCCh-----HHhcCCCEEEECC
Confidence            5899999999999999999888886111      3333343322111111223455555531     2247899999998


Q ss_pred             cccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          105 ADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      +.                   ..+..+...+.+.|+   ++|=.|+..
T Consensus        70 g~-------------------~~s~~~a~~~~~~G~---~VID~ss~~   95 (339)
T TIGR01296        70 GG-------------------SVSKEFAPKAAKCGA---IVIDNTSAF   95 (339)
T ss_pred             CH-------------------HHHHHHHHHHHHCCC---EEEECCHHH
Confidence            82                   334455666666665   477666643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.48  E-value=0.0007  Score=63.44  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=28.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWN   65 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~   65 (366)
                      +|+||+|+||||++|+.|++.|.+... +         +.++.++
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~e---------l~~~~~s   37 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFE---------VTALAAS   37 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCce---------EEEEEcC
Confidence            368999999999999999999887543 5         7777443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.47  E-value=0.00094  Score=62.14  Aligned_cols=103  Identities=17%  Similarity=0.186  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccc---------------------------cc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEH---------------------------MM--   71 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~---------------------------~~--   71 (366)
                      +..+|+|+|+ |.+|++++..|...|. +         |++++...-..                           ..  
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGvg~---------i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i   92 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGVGK---------VTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI   92 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCe---------EEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHH
Confidence            4578999996 9999999999999997 5         88887643100                           00  


Q ss_pred             cccccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           72 EDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        72 ~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      .....++.+..+++. +.+..+++++|+||.+..                  |......+-++|.+.+++   +|+.++.
T Consensus        93 np~v~v~~~~~~~~~-~~~~~~~~~~DlVid~~D------------------n~~~r~~ln~~~~~~~iP---~i~~~~~  150 (339)
T PRK07688         93 NSDVRVEAIVQDVTA-EELEELVTGVDLIIDATD------------------NFETRFIVNDAAQKYGIP---WIYGACV  150 (339)
T ss_pred             CCCcEEEEEeccCCH-HHHHHHHcCCCEEEEcCC------------------CHHHHHHHHHHHHHhCCC---EEEEeee
Confidence            011234455556543 456667888999997754                  344445677889998885   8998877


Q ss_pred             cccCC
Q 044498          152 CIYPE  156 (366)
Q Consensus       152 ~vyg~  156 (366)
                      ..||.
T Consensus       151 g~~G~  155 (339)
T PRK07688        151 GSYGL  155 (339)
T ss_pred             eeeeE
Confidence            66664

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.46  E-value=0.00053  Score=71.96  Aligned_cols=85  Identities=16%  Similarity=0.140  Sum_probs=59.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCC----CCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERH-YSTS----IPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~----~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ..|++|+|+|+ |+||+..++.|.+... ++.-    ....+.|.+.++........  ...+++.+..|+.|.+++.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence            35789999996 9999999999987532 1000    00122366677665432221  112567899999999999998


Q ss_pred             hcCCCEEEEcccc
Q 044498           94 TSGVDNMSNLAAD  106 (366)
Q Consensus        94 ~~~~d~vi~~a~~  106 (366)
                      ++++|+||++...
T Consensus       646 v~~~DaVIsalP~  658 (1042)
T PLN02819        646 VSQVDVVISLLPA  658 (1042)
T ss_pred             hcCCCEEEECCCc
Confidence            8999999999874

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.43  E-value=0.0017  Score=60.48  Aligned_cols=97  Identities=16%  Similarity=0.116  Sum_probs=58.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe--CCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD--WNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~--r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ..++|+|+||||++|..|++.|.+++|...    +  +..+.  |+..+.....  +......++. .    ..++++|+
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~----~--l~~las~rsaGk~~~~~--~~~~~v~~~~-~----~~~~~~D~   72 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYS----S--LKMLASARSAGKKVTFE--GRDYTVEELT-E----DSFDGVDI   72 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcc----e--EEEEEccCCCCCeeeec--CceeEEEeCC-H----HHHcCCCE
Confidence            457899999999999999999988887511    1  33332  2222222111  1233322332 1    22468999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      ||.+++.                   .....+...+.+.|+   ++|=.|+..-
T Consensus        73 vf~a~p~-------------------~~s~~~~~~~~~~g~---~VIDlS~~fR  104 (344)
T PLN02383         73 ALFSAGG-------------------SISKKFGPIAVDKGA---VVVDNSSAFR  104 (344)
T ss_pred             EEECCCc-------------------HHHHHHHHHHHhCCC---EEEECCchhh
Confidence            9988872                   234455555656666   5887787643

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.41  E-value=0.00067  Score=63.39  Aligned_cols=99  Identities=12%  Similarity=0.093  Sum_probs=59.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEE-eCCC-c-cccccccccceEE-EccCCChhHHHhhhcCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIAS-DWNK-N-EHMMEDMFCHEFH-LVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~-~r~~-~-~~~~~~~~~v~~~-~~D~~~~~~l~~~~~~~d   98 (366)
                      |+|+|+||||++|..+++.|.+. +.+         +..+ ++.. . +........+... ..++.+. +..++++++|
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~e---------l~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~D   70 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVE---------ITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDAD   70 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCce---------EEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCC
Confidence            58999999999999999999865 456         7744 4332 1 1111101101111 1122211 1233345899


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      +||.|.+.                   .....++..+.+.|+   ++|=.|+..-+
T Consensus        71 vVf~alP~-------------------~~s~~~~~~~~~~G~---~VIDlS~~fR~  104 (346)
T TIGR01850        71 VVFLALPH-------------------GVSAELAPELLAAGV---KVIDLSADFRL  104 (346)
T ss_pred             EEEECCCc-------------------hHHHHHHHHHHhCCC---EEEeCChhhhc
Confidence            99988772                   245567777767775   79988886544

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.39  E-value=0.0011  Score=60.71  Aligned_cols=111  Identities=12%  Similarity=0.018  Sum_probs=73.7

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc--ccccc-eEEEccCCChhHHHhhhcCCCE
Q 044498           25 RISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME--DMFCH-EFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v-~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ||.|+|++|.||++++..|..++.  +         +..++..+......  .+... .-+.+ ..+.+++...++++|+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~e---------lvL~Di~~a~g~a~DL~~~~~~~~i~~-~~~~~~~~~~~~daDi   70 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSE---------LSLYDIAGAAGVAADLSHIPTAASVKG-FSGEEGLENALKGADV   70 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcE---------EEEecCCCCcEEEchhhcCCcCceEEE-ecCCCchHHHcCCCCE
Confidence            689999999999999999988774  5         88888765221111  11000 01111 0011123456789999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ||-+||...   ....+..+.+..|....+.+.+...+++.+ ..+|.+|
T Consensus        71 vvitaG~~~---~~g~~R~dll~~N~~I~~~i~~~i~~~~p~-~iiivvs  116 (312)
T TIGR01772        71 VVIPAGVPR---KPGMTRDDLFNVNAGIVKDLVAAVAESCPK-AMILVIT  116 (312)
T ss_pred             EEEeCCCCC---CCCccHHHHHHHhHHHHHHHHHHHHHhCCC-eEEEEec
Confidence            999999643   234567788999999999999999998765 2344444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK04148 hypothetical protein; Provisional

Probab=97.37  E-value=0.0016  Score=51.60  Aligned_cols=89  Identities=17%  Similarity=0.139  Sum_probs=68.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      +.++|+++| +| -|.+++..|.+.|++         |++++.++..-......++.++.+|+.+++-  +..+++|.|+
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G~~---------ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liy   82 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESGFD---------VIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIY   82 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEE
Confidence            346899999 57 899999999999999         9999988775433344467999999998862  3346889988


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      .+=.           +       ......+++.+++.++.
T Consensus        83 sirp-----------p-------~el~~~~~~la~~~~~~  104 (134)
T PRK04148         83 SIRP-----------P-------RDLQPFILELAKKINVP  104 (134)
T ss_pred             EeCC-----------C-------HHHHHHHHHHHHHcCCC
Confidence            4422           1       45567799999999987

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.36  E-value=0.0014  Score=50.87  Aligned_cols=70  Identities=20%  Similarity=0.089  Sum_probs=56.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEEEcc
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMSNLA  104 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi~~a  104 (366)
                      |+|+|. |-+|..+++.|.+.+.+         |+++++++.........++.++.+|.++++.+.++ +++++.||-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~---------vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGID---------VVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSE---------EEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCE---------EEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEcc
Confidence            578885 89999999999997778         99999887765555555689999999999998886 57899888554


Q ss_pred             c
Q 044498          105 A  105 (366)
Q Consensus       105 ~  105 (366)
                      .
T Consensus        71 ~   71 (116)
T PF02254_consen   71 D   71 (116)
T ss_dssp             S
T ss_pred             C
Confidence            4

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.35  E-value=0.0027  Score=54.42  Aligned_cols=105  Identities=14%  Similarity=0.040  Sum_probs=67.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---------------------------cc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---------------------------ME--   72 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---------------------------~~--   72 (366)
                      +..+|+|+|++| +|+++++.|...|...        ++++|...-...                           ..  
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~--------i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lN   88 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDS--------ITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN   88 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCE--------EEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHC
Confidence            456899999866 9999999999999641        777764321100                           00  


Q ss_pred             ccccceEEEccCCC-hhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           73 DMFCHEFHLVDLRV-MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        73 ~~~~v~~~~~D~~~-~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      +...++.+..++.+ .+...+.++++|+||.+..                  +......+-+.|++++++   +|+.++.
T Consensus        89 p~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d------------------~~~~~~~ln~~c~~~~ip---~i~~~~~  147 (198)
T cd01485          89 PNVKLSIVEEDSLSNDSNIEEYLQKFTLVIATEE------------------NYERTAKVNDVCRKHHIP---FISCATY  147 (198)
T ss_pred             CCCEEEEEecccccchhhHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEee
Confidence            11233344444432 3345556778888885533                  234445577889999986   9998887


Q ss_pred             cccCC
Q 044498          152 CIYPE  156 (366)
Q Consensus       152 ~vyg~  156 (366)
                      +.||.
T Consensus       148 G~~G~  152 (198)
T cd01485         148 GLIGY  152 (198)
T ss_pred             cCEEE
Confidence            76664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.34  E-value=0.0017  Score=60.47  Aligned_cols=103  Identities=11%  Similarity=0.103  Sum_probs=70.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccc---------------------------cc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEH---------------------------MM--   71 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~---------------------------~~--   71 (366)
                      +.++|+|+|+ |-+|+++++.|...|. +         ++++|+..-..                           ..  
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~---------i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i   92 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGK---------LTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI   92 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCE---------EEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH
Confidence            4578999996 7799999999999997 5         77787653110                           00  


Q ss_pred             cccccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           72 EDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        72 ~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      .....++.+..+++ .+.+.++++++|+||.+..                  |......+-++|.+.+++   +|+.+..
T Consensus        93 np~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D------------------~~~~r~~in~~~~~~~ip---~i~~~~~  150 (338)
T PRK12475         93 NSEVEIVPVVTDVT-VEELEELVKEVDLIIDATD------------------NFDTRLLINDLSQKYNIP---WIYGGCV  150 (338)
T ss_pred             CCCcEEEEEeccCC-HHHHHHHhcCCCEEEEcCC------------------CHHHHHHHHHHHHHcCCC---EEEEEec
Confidence            01223455566665 3467778889999997754                  233334466788888886   8888776


Q ss_pred             cccCC
Q 044498          152 CIYPE  156 (366)
Q Consensus       152 ~vyg~  156 (366)
                      ..+|.
T Consensus       151 g~~G~  155 (338)
T PRK12475        151 GSYGV  155 (338)
T ss_pred             ccEEE
Confidence            65553

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.30  E-value=0.0034  Score=50.23  Aligned_cols=102  Identities=18%  Similarity=0.113  Sum_probs=67.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------c--cccc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------M--EDMF   75 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~--~~~~   75 (366)
                      .+||+|.|+ |-+|+.+++.|...|...        ++++|...-...                         .  .+..
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~--------i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~   72 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGK--------ITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDV   72 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSE--------EEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCc--------eeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCce
Confidence            468999995 999999999999999741        777775321100                         0  0122


Q ss_pred             cceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           76 CHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        76 ~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      .+..+..++ +.+...+.++++|+||.+..                  +......+.+.+++.++   .+|+.++...+|
T Consensus        73 ~v~~~~~~~-~~~~~~~~~~~~d~vi~~~d------------------~~~~~~~l~~~~~~~~~---p~i~~~~~g~~G  130 (135)
T PF00899_consen   73 EVEAIPEKI-DEENIEELLKDYDIVIDCVD------------------SLAARLLLNEICREYGI---PFIDAGVNGFYG  130 (135)
T ss_dssp             EEEEEESHC-SHHHHHHHHHTSSEEEEESS------------------SHHHHHHHHHHHHHTT----EEEEEEEETTEE
T ss_pred             eeeeeeccc-ccccccccccCCCEEEEecC------------------CHHHHHHHHHHHHHcCC---CEEEEEeecCEE
Confidence            344555555 34556777789999998765                  24455567888999887   488887755544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.29  E-value=0.00072  Score=57.08  Aligned_cols=65  Identities=9%  Similarity=-0.068  Sum_probs=39.3

Q ss_pred             cCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH----HHhhhcCCCEEEEccc
Q 044498           30 GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN----CLRMTSGVDNMSNLAA  105 (366)
Q Consensus        30 GatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~----l~~~~~~~d~vi~~a~  105 (366)
                      -+||..|.+|++.+..+|++         |+.+.....-..   +.+++.+.+  ...++    +.+.+.+.|++||+|+
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~---------V~li~g~~~~~~---p~~~~~i~v--~sa~em~~~~~~~~~~~Di~I~aAA   91 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAE---------VTLIHGPSSLPP---PPGVKVIRV--ESAEEMLEAVKELLPSADIIIMAAA   91 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-E---------EEEEE-TTS-------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-SB
T ss_pred             CCcCHHHHHHHHHHHHCCCE---------EEEEecCccccc---cccceEEEe--cchhhhhhhhccccCcceeEEEecc
Confidence            35799999999999999999         999987742111   223455554  44333    4444567899999999


Q ss_pred             ccC
Q 044498          106 DMG  108 (366)
Q Consensus       106 ~~~  108 (366)
                      ...
T Consensus        92 VsD   94 (185)
T PF04127_consen   92 VSD   94 (185)
T ss_dssp             --S
T ss_pred             hhh
Confidence            654

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.26  E-value=0.003  Score=55.54  Aligned_cols=115  Identities=13%  Similarity=0.036  Sum_probs=77.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc--ccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE--HMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~--~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      .+-||.|.||.|.||+.|.. |++....+   + +  ...++-....  .....+..-......++-++.++++++++|+
T Consensus        27 ~~~KVAvlGAaGGIGQPLSL-LlK~np~V---s-~--LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~adv   99 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSL-LLKLNPLV---S-E--LALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADV   99 (345)
T ss_pred             CcceEEEEecCCccCccHHH-HHhcCccc---c-e--eeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCE
Confidence            56789999999999999976 44444330   0 0  2233322111  1112222223334455667789999999999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      ||-=||.   ++......++.+.+|......|..++.+...+  ..|.+
T Consensus       100 VvIPAGV---PRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~--A~i~v  143 (345)
T KOG1494|consen  100 VVIPAGV---PRKPGMTRDDLFNINAGIVKTLAAAIAKCCPN--ALILV  143 (345)
T ss_pred             EEecCCC---CCCCCCcHHHhhhcchHHHHHHHHHHHhhCcc--ceeEe
Confidence            9988885   44556678899999999999999999988755  44443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.24  E-value=0.0011  Score=61.19  Aligned_cols=35  Identities=20%  Similarity=0.159  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      +|+|.|+| .|.+|..++..|++.|++         |+++++++.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~---------V~v~d~~~~   36 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHE---------VRLWDADPA   36 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCe---------eEEEeCCHH
Confidence            36899999 799999999999999999         999998864

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.23  E-value=0.0029  Score=58.61  Aligned_cols=100  Identities=15%  Similarity=0.019  Sum_probs=58.7

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc--cccccccccceEEEccCCChhHHHhhhcCCC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN--EHMMEDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~--~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ..+++|.|+||||++|..|++.|.++.|...    +  +..+.....  +.......  .   ..+.+.+.  ..+.++|
T Consensus         2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~----~--l~~laS~~saG~~~~~~~~--~---~~v~~~~~--~~~~~~D   68 (336)
T PRK08040          2 SEGWNIALLGATGAVGEALLELLAERQFPVG----E--LYALASEESAGETLRFGGK--S---VTVQDAAE--FDWSQAQ   68 (336)
T ss_pred             CCCCEEEEEccCCHHHHHHHHHHhcCCCCce----E--EEEEEccCcCCceEEECCc--c---eEEEeCch--hhccCCC
Confidence            3567999999999999999998888655411    1  554433221  11111111  1   11111111  1236799


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      ++|.+++                   -.....+...+.+.|+   ++|=.|+..-+.
T Consensus        69 vvf~a~p-------------------~~~s~~~~~~~~~~g~---~VIDlS~~fRl~  103 (336)
T PRK08040         69 LAFFVAG-------------------REASAAYAEEATNAGC---LVIDSSGLFALE  103 (336)
T ss_pred             EEEECCC-------------------HHHHHHHHHHHHHCCC---EEEECChHhcCC
Confidence            9998877                   2344566776666776   588888765443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.22  E-value=0.0023  Score=62.35  Aligned_cols=74  Identities=14%  Similarity=-0.001  Sum_probs=58.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhh-hcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRM-TSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~-~~~~d   98 (366)
                      .+++|+|+|+ |.+|+.+++.|.+.|++         |+++++++......  ...++.++.+|.++.+.+.++ +++++
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~---------v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~  299 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYS---------VKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEAD  299 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCe---------EEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCC
Confidence            4688999997 99999999999999999         99999876543222  123567899999999988764 57899


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      .||-+..
T Consensus       300 ~vi~~~~  306 (453)
T PRK09496        300 AFIALTN  306 (453)
T ss_pred             EEEECCC
Confidence            9985444

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.20  E-value=0.0038  Score=57.41  Aligned_cols=105  Identities=16%  Similarity=0.107  Sum_probs=73.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccccc----------cccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMMED----------MFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~~----------~~~v~~~~~D~~~~~~l~   91 (366)
                      +||.|+|+ |.+|+.++..|+..|  ++         |.++++.........          ...+.+..   .+.+   
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~e---------i~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~---   64 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADE---------LVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS---   64 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH---
Confidence            37999995 999999999999988  57         999998765422110          01111111   2222   


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       .+.++|+||+++|...   ....+..+.+..|....+.+.+.+++++.+ ..+|.+|
T Consensus        65 -~l~~aDIVIitag~~~---~~g~~R~dll~~N~~i~~~~~~~i~~~~~~-~~vivvs  117 (306)
T cd05291          65 -DCKDADIVVITAGAPQ---KPGETRLDLLEKNAKIMKSIVPKIKASGFD-GIFLVAS  117 (306)
T ss_pred             -HhCCCCEEEEccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEec
Confidence             2579999999999643   234466788999999999999999998765 2455555

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.16  E-value=0.0046  Score=52.93  Aligned_cols=103  Identities=17%  Similarity=0.100  Sum_probs=64.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------cc--cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------ME--DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~~--~~   74 (366)
                      +..+|+|.|+.| +|+++++.|...|...        ++++|...-...                         ..  +.
T Consensus        20 ~~s~VlIiG~gg-lG~evak~La~~GVg~--------i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~   90 (197)
T cd01492          20 RSARILLIGLKG-LGAEIAKNLVLSGIGS--------LTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR   90 (197)
T ss_pred             HhCcEEEEcCCH-HHHHHHHHHHHcCCCE--------EEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC
Confidence            457899999755 9999999999999641        777764422100                         00  11


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...+.+  ...+.++++|+||.+..                  |......+-++|++.+++   +|+.++.+.|
T Consensus        91 v~i~~~~~~~~~--~~~~~~~~~dvVi~~~~------------------~~~~~~~ln~~c~~~~ip---~i~~~~~G~~  147 (197)
T cd01492          91 VKVSVDTDDISE--KPEEFFSQFDVVVATEL------------------SRAELVKINELCRKLGVK---FYATGVHGLF  147 (197)
T ss_pred             CEEEEEecCccc--cHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEecCCE
Confidence            123344444432  23445678898886543                  133445566888999986   8988886666


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       148 G~  149 (197)
T cd01492         148 GF  149 (197)
T ss_pred             EE
Confidence            53

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.15  E-value=0.0029  Score=59.55  Aligned_cols=116  Identities=11%  Similarity=0.031  Sum_probs=72.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE--eCCCcccccc----cc------ccceEEEccCCChhHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS--DWNKNEHMME----DM------FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~--~r~~~~~~~~----~~------~~v~~~~~D~~~~~~l   90 (366)
                      .-||.|+|++|.+|.+++..|...|.-  .-+.++.+..+  ++........    ..      ..+.+..   .+.   
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~--~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~y---  115 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVF--GQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DPY---  115 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccc--CCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CCH---
Confidence            468999999999999999999987642  00112224344  5444321110    00      0111111   122   


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                       ..++++|+||-+||...   ....+..+.+..|+...+.+.....++..++.++|.+|-
T Consensus       116 -~~~kdaDIVVitAG~pr---kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       116 -EVFEDADWALLIGAKPR---GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             -HHhCCCCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence             34678999999999642   334567788999999999999999996523235666553

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.15  E-value=0.0044  Score=54.42  Aligned_cols=104  Identities=15%  Similarity=0.023  Sum_probs=67.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------cc--cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------ME--DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~~--~~   74 (366)
                      +..+|+|.| .|-+|+++++.|...|...        ++++|...-...                         ..  +.
T Consensus        20 ~~~~VlivG-~GglGs~va~~La~~Gvg~--------i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~   90 (228)
T cd00757          20 KNARVLVVG-AGGLGSPAAEYLAAAGVGK--------LGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD   90 (228)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCE--------EEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC
Confidence            456899999 5999999999999999641        666653221000                         00  11


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...++ .+.+.+.++++|+||.+..                  |...-..+-++|.+++++   +|+.+....+
T Consensus        91 ~~i~~~~~~i~-~~~~~~~~~~~DvVi~~~d------------------~~~~r~~l~~~~~~~~ip---~i~~g~~g~~  148 (228)
T cd00757          91 VEIEAYNERLD-AENAEELIAGYDLVLDCTD------------------NFATRYLINDACVKLGKP---LVSGAVLGFE  148 (228)
T ss_pred             CEEEEecceeC-HHHHHHHHhCCCEEEEcCC------------------CHHHHHHHHHHHHHcCCC---EEEEEeccCE
Confidence            23344444443 4556777889999998766                  133345677888888875   8887765544


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       149 g~  150 (228)
T cd00757         149 GQ  150 (228)
T ss_pred             EE
Confidence            43

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.14  E-value=0.0047  Score=53.12  Aligned_cols=103  Identities=15%  Similarity=0.047  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccc-------------------------ccc--c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEH-------------------------MME--D   73 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~-------------------------~~~--~   73 (366)
                      ...+|+|+| .|-+|+++++.|...|. +         +++++...-..                         ...  +
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~---------i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np   89 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGT---------IVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS   89 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCe---------EEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC
Confidence            456899999 59999999999999996 5         78877642110                         000  1


Q ss_pred             cccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498           74 MFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        74 ~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      ...++.+...+. .+.+.+.++++|+||.+..                  |...-..+-+.|++++++   +|+.++.+.
T Consensus        90 ~v~i~~~~~~i~-~~~~~~~~~~~D~Vi~~~d------------------~~~~r~~l~~~~~~~~ip---~i~~~~~g~  147 (202)
T TIGR02356        90 DIQVTALKERVT-AENLELLINNVDLVLDCTD------------------NFATRYLINDACVALGTP---LISAAVVGF  147 (202)
T ss_pred             CCEEEEehhcCC-HHHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEeccC
Confidence            112223333333 3456777889999997765                  234445577888888885   888877555


Q ss_pred             cCC
Q 044498          154 YPE  156 (366)
Q Consensus       154 yg~  156 (366)
                      +|.
T Consensus       148 ~G~  150 (202)
T TIGR02356       148 GGQ  150 (202)
T ss_pred             eEE
Confidence            543

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.13  E-value=0.0041  Score=56.60  Aligned_cols=107  Identities=17%  Similarity=0.057  Sum_probs=72.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccc----ccccc----cc-eEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHM----MEDMF----CH-EFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~----~~~~~----~v-~~~~~D~~~~~~l~~   92 (366)
                      +||.|+|+ |+||+.++..|..++  .+         +..++.......    ...+.    .. ..+.+| .+    -+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~e---------l~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~   65 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSE---------LVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YE   65 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccce---------EEEEEcccccccchhcchhhcchhccCceEEecC-CC----hh
Confidence            58999999 999999999997765  36         888887733211    11100    00 111222 11    23


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      .+++.|+|+-.||..-   ....+..+.+..|......+.+...+.+.+  -++.+-|
T Consensus        66 ~~~~aDiVvitAG~pr---KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d--~ivlVvt  118 (313)
T COG0039          66 DLKGADIVVITAGVPR---KPGMTRLDLLEKNAKIVKDIAKAIAKYAPD--AIVLVVT  118 (313)
T ss_pred             hhcCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCCC--eEEEEec
Confidence            4678999999998543   344577888999999999999999998865  4444433

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.08  E-value=0.0038  Score=59.75  Aligned_cols=126  Identities=14%  Similarity=0.108  Sum_probs=80.5

Q ss_pred             ccccccccCC--CCCCCCCeEEEEcCCCchhHHHHHHHHHc-------CCCCCCCCCccEEEEEeCCCcccccc----cc
Q 044498            8 CTYDKLERES--HWPSGKLRISSIGVGGFIPSNIARRLKSE-------RHYSTSIPNALYIIASDWNKNEHMME----DM   74 (366)
Q Consensus         8 ~~~~~~~~~~--~~~~~~~~vlItGatG~iG~~l~~~L~~~-------g~~~~~~~~~~~V~~~~r~~~~~~~~----~~   74 (366)
                      ++||...++.  .|. +.-||.|+|++|.+|.+++..|...       +..     .  .+..+++........    ..
T Consensus        84 ~~~~~~~~~~~~~~~-~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~-----~--eLvliD~~~~~a~G~amDL~d  155 (444)
T PLN00112         84 LTYDLKAEEETKSWK-KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIA-----L--KLLGSERSKQALEGVAMELED  155 (444)
T ss_pred             EEEecccchhhhcCC-CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcc-----c--EEEEEcCCcchhHHHHHHHHH
Confidence            3466654333  342 4578999999999999999999987       421     1  177777765532111    10


Q ss_pred             c----cceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHH-cCCCceeEEEEe
Q 044498           75 F----CHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM-NGVMSLTFFFVS  149 (366)
Q Consensus        75 ~----~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~r~I~~S  149 (366)
                      .    ..++... ..++    ..++++|+||-.||..-   ....+..+.+..|+...+.+.....+ ++.. ..+|.+|
T Consensus       156 aa~~~~~~v~i~-~~~y----e~~kdaDiVVitAG~pr---kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~-~ivIVVs  226 (444)
T PLN00112        156 SLYPLLREVSIG-IDPY----EVFQDAEWALLIGAKPR---GPGMERADLLDINGQIFAEQGKALNEVASRN-VKVIVVG  226 (444)
T ss_pred             hhhhhcCceEEe-cCCH----HHhCcCCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEEcC
Confidence            0    0011101 1222    23678999999999642   23456788899999999999999999 4544 2466555


Q ss_pred             c
Q 044498          150 S  150 (366)
Q Consensus       150 S  150 (366)
                      -
T Consensus       227 N  227 (444)
T PLN00112        227 N  227 (444)
T ss_pred             C
Confidence            3

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.07  E-value=0.0084  Score=48.44  Aligned_cols=99  Identities=17%  Similarity=0.092  Sum_probs=64.1

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------------------c--ccccc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------------------E--DMFCH   77 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------------------~--~~~~v   77 (366)
                      +|+|+|+ |-+|+++++.|...|...        +++++...-....                         .  +...+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~--------i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i   71 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGK--------ITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNV   71 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCE--------EEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEE
Confidence            5899996 999999999999999741        7777654211000                         0  11223


Q ss_pred             eEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           78 EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        78 ~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      +.+...+.+.. ....++++|+||.+..                  |......+.++|++.+++   +|..++...+
T Consensus        72 ~~~~~~~~~~~-~~~~~~~~diVi~~~d------------------~~~~~~~l~~~~~~~~i~---~i~~~~~g~~  126 (143)
T cd01483          72 TAVPEGISEDN-LDDFLDGVDLVIDAID------------------NIAVRRALNRACKELGIP---VIDAGGLGLG  126 (143)
T ss_pred             EEEeeecChhh-HHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEcCCCcE
Confidence            34444444332 3556678999997766                  245566788899999885   8887775433

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.07  E-value=0.0068  Score=56.66  Aligned_cols=100  Identities=13%  Similarity=0.072  Sum_probs=55.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |++|.|+||||++|+.+++.|++. ...   ..+   +..++..........-.+-.....+..+.+.    +.++|+++
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~---~~~---l~~~ss~~sg~~~~~f~g~~~~v~~~~~~~~----~~~~Divf   70 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFD---LIE---PVFFSTSQAGGAAPSFGGKEGTLQDAFDIDA----LKKLDIII   70 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCC---cCc---EEEecchhhCCcccccCCCcceEEecCChhH----hcCCCEEE
Confidence            479999999999999999966654 432   111   3334332111111000011223333343332    36799999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      .+++                   -..+..+...+.+.|.+ +.+|=.||..
T Consensus        71 ~a~~-------------------~~~s~~~~~~~~~aG~~-~~VID~Ss~f  101 (369)
T PRK06598         71 TCQG-------------------GDYTNEVYPKLRAAGWQ-GYWIDAASTL  101 (369)
T ss_pred             ECCC-------------------HHHHHHHHHHHHhCCCC-eEEEECChHH
Confidence            8887                   23455677777777752 1355555543

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.05  E-value=0.0045  Score=57.25  Aligned_cols=113  Identities=16%  Similarity=0.063  Sum_probs=74.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccc----cccccceEE--EccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFH--LVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~--~~D~~~~~~l~~~~   94 (366)
                      +.+||.|+|| |.+|+.++..|...| .+         |..++.+......    .... ....  ...+....+.+ .+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~---------l~L~Di~~~~~~g~~lDl~~~-~~~~~~~~~i~~~~d~~-~l   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGD---------VVLYDVIKGVPQGKALDLKHF-STLVGSNINILGTNNYE-DI   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCe---------EEEEECCCccchhHHHHHhhh-ccccCCCeEEEeCCCHH-Hh
Confidence            4568999997 999999999888888 57         8999886543211    0000 0000  01111112233 56


Q ss_pred             cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +++|+||.+++...   ....+..+.+..|......+.+.+.+.+.+ ..+|.+|-
T Consensus        72 ~~ADiVVitag~~~---~~g~~r~dll~~n~~i~~~i~~~i~~~~p~-a~vivvsN  123 (319)
T PTZ00117         72 KDSDVVVITAGVQR---KEEMTREDLLTINGKIMKSVAESVKKYCPN-AFVICVTN  123 (319)
T ss_pred             CCCCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEecC
Confidence            89999999998543   223456677889999999999999998755 23666553

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.04  E-value=0.0018  Score=59.04  Aligned_cols=77  Identities=12%  Similarity=0.042  Sum_probs=56.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC---cccccc------ccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK---NEHMME------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~---~~~~~~------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++++++|+|| |.+|++++..|.+.|...        |++++|+.   .+....      ....+.+...|+.+.+++..
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~--------V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~  195 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKE--------ITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKA  195 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCE--------EEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHh
Confidence            5678999998 899999999999999741        88888875   221110      11123455678888877877


Q ss_pred             hhcCCCEEEEccccc
Q 044498           93 MTSGVDNMSNLAADM  107 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~  107 (366)
                      .+..+|+|||+....
T Consensus       196 ~~~~~DilINaTp~G  210 (289)
T PRK12548        196 EIASSDILVNATLVG  210 (289)
T ss_pred             hhccCCEEEEeCCCC
Confidence            788899999988743

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.04  E-value=0.0013  Score=64.10  Aligned_cols=70  Identities=17%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----ccccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----MEDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ..++|+|+|+++ +|..+++.|++.|++         |++.++......     .....++.++.+|..+     ....+
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~---------V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~   68 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLGAK---------VILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEG   68 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCE---------EEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhc
Confidence            467899999877 999999999999999         999998653221     1122356777777776     23467


Q ss_pred             CCEEEEcccc
Q 044498           97 VDNMSNLAAD  106 (366)
Q Consensus        97 ~d~vi~~a~~  106 (366)
                      +|+||++++.
T Consensus        69 ~d~vv~~~g~   78 (450)
T PRK14106         69 VDLVVVSPGV   78 (450)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.02  E-value=0.0042  Score=57.17  Aligned_cols=112  Identities=15%  Similarity=0.036  Sum_probs=71.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccc----cc-cceEEEccCCChhHHHhhhcC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMED----MF-CHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~----~~-~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ||||.|+|+ |.+|..++..|...|. +         |.++++.........    .. ........+....+.. .+++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~e---------v~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~-~~~~   70 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGD---------VVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE-DIAG   70 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeE---------EEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH-HHCC
Confidence            579999998 9999999999998765 8         999998654321100    00 0000001111111222 3689


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +|+||.+++...   ....+..+.+..|+.....+++.+.+...+ ..+|.+|
T Consensus        71 aDiVii~~~~p~---~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~-~~viv~t  119 (307)
T PRK06223         71 SDVVVITAGVPR---KPGMSRDDLLGINAKIMKDVAEGIKKYAPD-AIVIVVT  119 (307)
T ss_pred             CCEEEECCCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEec
Confidence            999999988532   222344566778999999999998887654 2456554

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.00  E-value=0.0099  Score=52.54  Aligned_cols=104  Identities=9%  Similarity=0.001  Sum_probs=66.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------------------------cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------------------------DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------------------------~~   74 (366)
                      +..+|+|.|+ |.+|+++++.|...|...        ++++|...-.....                           +.
T Consensus        23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~--------i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~   93 (240)
T TIGR02355        23 KASRVLIVGL-GGLGCAASQYLAAAGVGN--------LTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH   93 (240)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCE--------EEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC
Confidence            4568999995 999999999999998641        66666533211000                           11


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...++ .+.+.++++++|+||.+.-                  |......+-++|.+.+++   +|+.++...+
T Consensus        94 v~i~~~~~~i~-~~~~~~~~~~~DlVvd~~D------------------~~~~r~~ln~~~~~~~ip---~v~~~~~g~~  151 (240)
T TIGR02355        94 IAINPINAKLD-DAELAALIAEHDIVVDCTD------------------NVEVRNQLNRQCFAAKVP---LVSGAAIRME  151 (240)
T ss_pred             cEEEEEeccCC-HHHHHHHhhcCCEEEEcCC------------------CHHHHHHHHHHHHHcCCC---EEEEEecccE
Confidence            12333333333 3456667788999997765                  234445577888888886   8887765555


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       152 G~  153 (240)
T TIGR02355       152 GQ  153 (240)
T ss_pred             eE
Confidence            53

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.98  E-value=0.0086  Score=53.14  Aligned_cols=103  Identities=12%  Similarity=0.053  Sum_probs=66.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------c--ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------M--EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~--~~~   74 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        +++++...-...                         .  .+.
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~--------i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~  101 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGT--------LTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPH  101 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCE--------EEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCC
Confidence            4578999997 999999999999999631        666654321100                         0  011


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...++ .+.+.++++++|+||.+..                  |...-..+-++|.+++++   +|+.++...+
T Consensus       102 v~i~~~~~~i~-~~~~~~~~~~~DiVi~~~D------------------~~~~r~~ln~~~~~~~ip---~v~~~~~g~~  159 (245)
T PRK05690        102 IAIETINARLD-DDELAALIAGHDLVLDCTD------------------NVATRNQLNRACFAAKKP---LVSGAAIRME  159 (245)
T ss_pred             CEEEEEeccCC-HHHHHHHHhcCCEEEecCC------------------CHHHHHHHHHHHHHhCCE---EEEeeeccCC
Confidence            23344444444 3456667889999997755                  233344577888888875   8876665444


Q ss_pred             C
Q 044498          155 P  155 (366)
Q Consensus       155 g  155 (366)
                      |
T Consensus       160 G  160 (245)
T PRK05690        160 G  160 (245)
T ss_pred             c
Confidence            4

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.96  E-value=0.011  Score=52.40  Aligned_cols=92  Identities=16%  Similarity=0.090  Sum_probs=68.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      +|++|||+|||+ =|+.|++.|.+.|+.         |++........  ....++.+..+-+.+.+.+.+.++  +++.
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~~g~~---------v~~Svat~~g~--~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~   68 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAAAGVD---------IVLSLAGRTGG--PADLPGPVRVGGFGGAEGLAAYLREEGIDL   68 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHhCCCe---------EEEEEccCCCC--cccCCceEEECCCCCHHHHHHHHHHCCCCE
Confidence            367899999976 599999999999988         66554333222  222345788888878888999885  7999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ||...=..                -...+.++.++|++.+++
T Consensus        69 VIDATHPf----------------A~~is~~a~~ac~~~~ip   94 (248)
T PRK08057         69 VIDATHPY----------------AAQISANAAAACRALGIP   94 (248)
T ss_pred             EEECCCcc----------------HHHHHHHHHHHHHHhCCc
Confidence            99653321                267788999999999997

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.96  E-value=0.064  Score=43.49  Aligned_cols=148  Identities=14%  Similarity=0.070  Sum_probs=80.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC---hh----HHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV---MD----NCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~---~~----~l~~~~~   95 (366)
                      ..||+|.||-|-+|+++++.+..+++-         |.-++-..++.....    .++.++-+=   .+    .+.+.+.
T Consensus         3 agrVivYGGkGALGSacv~~Fkannyw---------V~siDl~eNe~Ad~s----I~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYW---------VLSIDLSENEQADSS----ILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeE---------EEEEeecccccccce----EEecCCcchhHHHHHHHHHHHHhhc
Confidence            358999999999999999999999998         888876655433221    233333221   11    2222333


Q ss_pred             --CCCEEEEcccccCCcccc----ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc-cccCCCCCCCCCccccc
Q 044498           96 --GVDNMSNLAADMGGMGFI----QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA-CIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~-~vyg~~~~~~~~~~e~~  168 (366)
                        ++|.|+..||--.+.+..    ..+.+..++..+....--...+.++ .|..-++-+..+ ...+..           
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~H-LK~GGLL~LtGAkaAl~gT-----------  137 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTH-LKPGGLLQLTGAKAALGGT-----------  137 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhc-cCCCceeeecccccccCCC-----------
Confidence              699999888743221111    1122223333333222222222222 111123333322 122221           


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc-CCc
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF-EIE  199 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-~~~  199 (366)
                          ..--.||..|.+.-++...++.+. |++
T Consensus       138 ----PgMIGYGMAKaAVHqLt~SLaak~SGlP  165 (236)
T KOG4022|consen  138 ----PGMIGYGMAKAAVHQLTSSLAAKDSGLP  165 (236)
T ss_pred             ----CcccchhHHHHHHHHHHHHhcccccCCC
Confidence                123469999999999988876553 554

>PRK08328 hypothetical protein; Provisional

Probab=96.92  E-value=0.012  Score=51.81  Aligned_cols=105  Identities=19%  Similarity=0.163  Sum_probs=66.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----------------------------cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----------------------------ED   73 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----------------------------~~   73 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        ++++|...-....                            .+
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~--------i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np   96 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGR--------ILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNS   96 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCE--------EEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCC
Confidence            4568999995 999999999999999641        6666643211000                            01


Q ss_pred             cccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498           74 MFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        74 ~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      ...++.+...+ +.+.+.++++++|+||.+.-                  |......+-++|++.+++   +|+.++.+.
T Consensus        97 ~v~v~~~~~~~-~~~~~~~~l~~~D~Vid~~d------------------~~~~r~~l~~~~~~~~ip---~i~g~~~g~  154 (231)
T PRK08328         97 DIKIETFVGRL-SEENIDEVLKGVDVIVDCLD------------------NFETRYLLDDYAHKKGIP---LVHGAVEGT  154 (231)
T ss_pred             CCEEEEEeccC-CHHHHHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEeeccC
Confidence            12233333444 33445666778888886655                  223333456788888885   998888777


Q ss_pred             cCCC
Q 044498          154 YPEF  157 (366)
Q Consensus       154 yg~~  157 (366)
                      ||..
T Consensus       155 ~G~v  158 (231)
T PRK08328        155 YGQV  158 (231)
T ss_pred             EEEE
Confidence            7653

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.92  E-value=0.0058  Score=56.49  Aligned_cols=113  Identities=16%  Similarity=0.010  Sum_probs=73.4

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----------ccccceEEEccCCChh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----------DMFCHEFHLVDLRVMD   88 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----------~~~~v~~~~~D~~~~~   88 (366)
                      |.+++||.|+| +|.+|+.++..|...|. +         |..++.++......          ......+..  ..|  
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~---------i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d--   68 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGD---------VVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN--   68 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCe---------EEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC--
Confidence            34567999999 59999999999988885 7         99999876532100          000111111  122  


Q ss_pred             HHHhhhcCCCEEEEcccccCCccc--cccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGF--IQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       . +.++++|+||.+++....+..  ...+..+.+..|+.....+.+.+.+.+.+ ..+|.+|
T Consensus        69 -~-~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~-a~~iv~s  128 (321)
T PTZ00082         69 -Y-EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPN-AFVIVIT  128 (321)
T ss_pred             -H-HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEec
Confidence             2 246899999999986432111  00144567888999999999999888754 2455555

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.91  E-value=0.0053  Score=56.15  Aligned_cols=83  Identities=14%  Similarity=0.059  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      +|++|.|.||||++|..|++.|.+..+ +         +..+..+...              ++.+   ....+.++|+|
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~---------l~~~~s~~~~--------------~~~~---~~~~~~~~Dvv   54 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIE---------LLSIPEAKRK--------------DAAA---RRELLNAADVA   54 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeE---------EEEEecCCCC--------------cccC---chhhhcCCCEE
Confidence            467999999999999999998877642 3         5555433221              1111   12345679999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      |.+...                   .....+...+.+.++   ++|=.|+..
T Consensus        55 Flalp~-------------------~~s~~~~~~~~~~g~---~VIDlSadf   84 (313)
T PRK11863         55 ILCLPD-------------------DAAREAVALIDNPAT---RVIDASTAH   84 (313)
T ss_pred             EECCCH-------------------HHHHHHHHHHHhCCC---EEEECChhh
Confidence            977662                   234455566656666   588788753

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.89  E-value=0.011  Score=54.04  Aligned_cols=102  Identities=11%  Similarity=0.012  Sum_probs=67.2

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------------------------cccccc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------------------------EDMFCH   77 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------------------------~~~~~v   77 (366)
                      ||||+|+ |.+|.++++.|...|...        ++++|...-....                           .....+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~--------ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V   71 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGE--------IHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKI   71 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCe--------EEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeE
Confidence            5899996 999999999999999641        7777643211000                           011234


Q ss_pred             eEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCC
Q 044498           78 EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        78 ~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~  156 (366)
                      +.+..++.+.....+.++++|+||.+.-                  |...-..+-+.|...+++   ||..++.+.+|.
T Consensus        72 ~~~~~~i~~~~~~~~f~~~~DvVv~a~D------------------n~~ar~~in~~c~~~~ip---~I~~gt~G~~G~  129 (312)
T cd01489          72 VAYHANIKDPDFNVEFFKQFDLVFNALD------------------NLAARRHVNKMCLAADVP---LIESGTTGFLGQ  129 (312)
T ss_pred             EEEeccCCCccchHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHCCCC---EEEEecCcceeE
Confidence            4555666654334456778898886644                  355556677888888885   888887665553

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=96.89  E-value=0.0003  Score=56.38  Aligned_cols=74  Identities=12%  Similarity=0.032  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc--ccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM--FCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~--~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ..++++|+|+ |..|+.++..|.+.|...        |++++|+..+......  .+..+-..+   .+++...+.++|+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~--------i~i~nRt~~ra~~l~~~~~~~~~~~~~---~~~~~~~~~~~Di   78 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKE--------ITIVNRTPERAEALAEEFGGVNIEAIP---LEDLEEALQEADI   78 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSE--------EEEEESSHHHHHHHHHHHTGCSEEEEE---GGGHCHHHHTESE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCE--------EEEEECCHHHHHHHHHHcCccccceee---HHHHHHHHhhCCe
Confidence            6789999996 889999999999999651        8888887654332211  111222223   3445566789999


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      ||++.+..
T Consensus        79 vI~aT~~~   86 (135)
T PF01488_consen   79 VINATPSG   86 (135)
T ss_dssp             EEE-SSTT
T ss_pred             EEEecCCC
Confidence            99998854

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.89  E-value=0.0055  Score=55.06  Aligned_cols=109  Identities=14%  Similarity=0.041  Sum_probs=72.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC----CCCCCCCCccEEEEEeCCCcccccc----ccccceEE-EccCCChhHHHhhhcC
Q 044498           26 ISSIGVGGFIPSNIARRLKSER----HYSTSIPNALYIIASDWNKNEHMME----DMFCHEFH-LVDLRVMDNCLRMTSG   96 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g----~~~~~~~~~~~V~~~~r~~~~~~~~----~~~~v~~~-~~D~~~~~~l~~~~~~   96 (366)
                      |.|+||+|.+|..++..|+..|    .+         |..++.........    ... .... ...+.-..++...+++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~e---------l~L~D~~~~~l~~~~~dl~~~-~~~~~~~~i~~~~d~~~~~~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIE---------LVLYDIDEEKLKGVAMDLQDA-VEPLADIKVSITDDPYEAFKD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceE---------EEEEeCCcccchHHHHHHHHh-hhhccCcEEEECCchHHHhCC
Confidence            5799999999999999999888    56         88898766432111    000 0000 1122212234556789


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      +|+||-.++...   ............|+...+.+.+.+.+.+.+ ..+|..
T Consensus        71 aDiVv~t~~~~~---~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~-a~~i~~  118 (263)
T cd00650          71 ADVVIITAGVGR---KPGMGRLDLLKRNVPIVKEIGDNIEKYSPD-AWIIVV  118 (263)
T ss_pred             CCEEEECCCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEe
Confidence            999999998543   223345567888999999999999998754 345544

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.87  E-value=0.005  Score=56.65  Aligned_cols=107  Identities=11%  Similarity=0.043  Sum_probs=71.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----ccc-----cceEEEccCCChhHHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----DMF-----CHEFHLVDLRVMDNCL   91 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----~~~-----~v~~~~~D~~~~~~l~   91 (366)
                      .+||.|+|+ |.+|+.++..|...|.  +         +..++.+.......    ...     ...+...  .+++   
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~e---------l~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~---   67 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADE---------LVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS---   67 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH---
Confidence            358999996 9999999999988763  5         88888765421110    000     0111110  1222   


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       .++++|+||-+||...   ....+..+.+..|....+.+.+...+++.+ ..+|.+|
T Consensus        68 -~~~~adivvitaG~~~---k~g~~R~dll~~N~~i~~~~~~~i~~~~p~-~~vivvs  120 (312)
T cd05293          68 -VTANSKVVIVTAGARQ---NEGESRLDLVQRNVDIFKGIIPKLVKYSPN-AILLVVS  120 (312)
T ss_pred             -HhCCCCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-cEEEEcc
Confidence             2689999999999643   223466778999999999999999999755 2455554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=96.85  E-value=0.0086  Score=55.89  Aligned_cols=107  Identities=16%  Similarity=0.120  Sum_probs=71.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----ccc----cceEEEccCCChhHHHhh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----DMF----CHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----~~~----~v~~~~~D~~~~~~l~~~   93 (366)
                      +||.|+|+ |.||+.++..|+..+.  +         +..++.........    ...    +..-+.++ .+++    .
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~e---------l~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~-~dy~----~  102 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADE---------LALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS-TDYA----V  102 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC-CCHH----H
Confidence            69999996 9999999999988764  5         88888765422111    000    00111110 1222    2


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ++++|+||-+||...   ....+..+.+..|+...+.+.+...+++.+ ..+|.+|
T Consensus       103 ~~daDiVVitAG~~~---k~g~tR~dll~~N~~I~~~i~~~I~~~~p~-~ivivvt  154 (350)
T PLN02602        103 TAGSDLCIVTAGARQ---IPGESRLNLLQRNVALFRKIIPELAKYSPD-TILLIVS  154 (350)
T ss_pred             hCCCCEEEECCCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEec
Confidence            689999999999642   223456778999999999999999998755 2455555

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.84  E-value=0.0068  Score=55.78  Aligned_cols=104  Identities=15%  Similarity=0.078  Sum_probs=70.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccc----ccc-----ccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMM----EDM-----FCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~----~~~-----~~v~~~~~D~~~~~~l~~   92 (366)
                      |||.|+|+ |.+|..++..|..+|  .+         |.+++++......    ...     ....+..   .+.    .
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~e---------v~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~   63 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASE---------IVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----A   63 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCE---------EEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----H
Confidence            58999997 999999999999998  57         9999987643221    110     0011111   122    2


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      .++++|+||.+++...   ....+....+..|+.....+.+.+.+++.+ ..++.+
T Consensus        64 ~l~~aDiViita~~~~---~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~-giiiv~  115 (308)
T cd05292          64 DCKGADVVVITAGANQ---KPGETRLDLLKRNVAIFKEIIPQILKYAPD-AILLVV  115 (308)
T ss_pred             HhCCCCEEEEccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEe
Confidence            3689999999999542   223345667888999999999999888755 234443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.80  E-value=0.015  Score=54.65  Aligned_cols=103  Identities=16%  Similarity=-0.002  Sum_probs=67.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------------------------ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------------------------EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------------------------~~~   74 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        +++++...-....                           .+.
T Consensus        27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~--------i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~   97 (355)
T PRK05597         27 FDAKVAVIGA-GGLGSPALLYLAGAGVGH--------ITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD   97 (355)
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCe--------EEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC
Confidence            4578999996 999999999999999641        7777654311000                           011


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...++. +...++++++|+||.+..                  |...-..+-++|.+.+++   ||+.++...+
T Consensus        98 v~v~~~~~~i~~-~~~~~~~~~~DvVvd~~d------------------~~~~r~~~n~~c~~~~ip---~v~~~~~g~~  155 (355)
T PRK05597         98 VKVTVSVRRLTW-SNALDELRDADVILDGSD------------------NFDTRHLASWAAARLGIP---HVWASILGFD  155 (355)
T ss_pred             cEEEEEEeecCH-HHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEEecCe
Confidence            233444445543 445567789999997765                  233334466788888886   8988765544


Q ss_pred             C
Q 044498          155 P  155 (366)
Q Consensus       155 g  155 (366)
                      |
T Consensus       156 g  156 (355)
T PRK05597        156 A  156 (355)
T ss_pred             E
Confidence            4

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.80  E-value=0.0091  Score=56.50  Aligned_cols=55  Identities=9%  Similarity=0.001  Sum_probs=44.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|.|+||.|.+|..+++.|.+.|++         |+++++...                    +...+++.++|+||
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~---------V~~~d~~~~--------------------~~~~~~~~~aDlVi  147 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQ---------VRILEQDDW--------------------DRAEDILADAGMVI  147 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCe---------EEEeCCCcc--------------------hhHHHHHhcCCEEE
Confidence            5578999999999999999999999999         999987421                    12334566788888


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus       148 lavP  151 (374)
T PRK11199        148 VSVP  151 (374)
T ss_pred             EeCc
Confidence            7766

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.79  E-value=0.019  Score=49.80  Aligned_cols=104  Identities=19%  Similarity=0.135  Sum_probs=65.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------------------------ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------------------------DMF   75 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------------------------~~~   75 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        ++++|...-.....                          ...
T Consensus        27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~--------i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v   97 (212)
T PRK08644         27 KKAKVGIAGA-GGLGSNIAVALARSGVGN--------LKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFV   97 (212)
T ss_pred             hCCCEEEECc-CHHHHHHHHHHHHcCCCe--------EEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCC
Confidence            4568999995 999999999999998641        77776542110000                          111


Q ss_pred             cceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEeccccc
Q 044498           76 CHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIY  154 (366)
Q Consensus        76 ~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vy  154 (366)
                      .++.+...+++ +.+.+.++++|+||.+.-                  |......+.+.+.+. +++   +|+.+...-|
T Consensus        98 ~v~~~~~~i~~-~~~~~~~~~~DvVI~a~D------------------~~~~r~~l~~~~~~~~~~p---~I~~~~~~~~  155 (212)
T PRK08644         98 EIEAHNEKIDE-DNIEELFKDCDIVVEAFD------------------NAETKAMLVETVLEHPGKK---LVAASGMAGY  155 (212)
T ss_pred             EEEEEeeecCH-HHHHHHHcCCCEEEECCC------------------CHHHHHHHHHHHHHhCCCC---EEEeehhhcc
Confidence            23344444443 445566788999997743                  244445677888887 775   8887665445


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      +.
T Consensus       156 ~~  157 (212)
T PRK08644        156 GD  157 (212)
T ss_pred             CC
Confidence            44

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.78  E-value=0.0043  Score=54.11  Aligned_cols=36  Identities=22%  Similarity=0.297  Sum_probs=32.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      |+|.|+||+|.+|+.++..|.+.|++         |.+.+|++..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~---------V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNK---------IIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCE---------EEEEEcCHHH
Confidence            58999999999999999999999999         9998887644

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.78  E-value=0.0067  Score=56.70  Aligned_cols=26  Identities=15%  Similarity=0.414  Sum_probs=22.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC-CC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER-HY   49 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g-~~   49 (366)
                      +||+|+|+||++|++|++.|.+.. .+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~   27 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFE   27 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCce
Confidence            589999999999999999887765 56

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.77  E-value=0.005  Score=57.12  Aligned_cols=99  Identities=13%  Similarity=0.120  Sum_probs=57.5

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEEe--CCCccccccccccceEEEccCCChhHHHhhhcCC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIASD--WNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~~--r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      ...++|.|+||||++|+.+++.|.+ ..+..   .+   +..+.  ++.-+.......  ....-++ +++.    ++++
T Consensus         3 ~~~~~VaIvGATG~vG~ell~lL~~h~~f~v---~~---l~~~aS~~saGk~~~~~~~--~l~v~~~-~~~~----~~~~   69 (347)
T PRK06728          3 EKGYHVAVVGATGAVGQKIIELLEKETKFNI---AE---VTLLSSKRSAGKTVQFKGR--EIIIQEA-KINS----FEGV   69 (347)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHCCCCCc---cc---EEEEECcccCCCCeeeCCc--ceEEEeC-CHHH----hcCC
Confidence            3457999999999999999998884 55441   00   33333  222222211111  1222222 2332    3679


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      |+++.+++                   -.....+...+.+.|+   .+|=.||..-+
T Consensus        70 Divf~a~~-------------------~~~s~~~~~~~~~~G~---~VID~Ss~fR~  104 (347)
T PRK06728         70 DIAFFSAG-------------------GEVSRQFVNQAVSSGA---IVIDNTSEYRM  104 (347)
T ss_pred             CEEEECCC-------------------hHHHHHHHHHHHHCCC---EEEECchhhcC
Confidence            99998877                   2345566666767776   58877776544

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.76  E-value=0.0063  Score=50.42  Aligned_cols=95  Identities=16%  Similarity=0.115  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-------------ccceEEEccCCChhH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-------------FCHEFHLVDLRVMDN   89 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-------------~~v~~~~~D~~~~~~   89 (366)
                      ||+|.++| .|-+|+.+++.|++.|++         |.+++|++........             ...+++..-+.+.++
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~---------v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~   70 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYE---------VTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDA   70 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTE---------EEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHH
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCe---------EEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchh
Confidence            68999999 599999999999999999         9999988653222111             123455555666555


Q ss_pred             HHhhhcC---------CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498           90 CLRMTSG---------VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus        90 l~~~~~~---------~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      ++.++.+         -.++|++...                 .......+.+.+...++   +||-
T Consensus        71 v~~v~~~~~i~~~l~~g~iiid~sT~-----------------~p~~~~~~~~~~~~~g~---~~vd  117 (163)
T PF03446_consen   71 VEAVLFGENILAGLRPGKIIIDMSTI-----------------SPETSRELAERLAAKGV---RYVD  117 (163)
T ss_dssp             HHHHHHCTTHGGGS-TTEEEEE-SS-------------------HHHHHHHHHHHHHTTE---EEEE
T ss_pred             hhhhhhhhHHhhccccceEEEecCCc-----------------chhhhhhhhhhhhhccc---eeee
Confidence            5554333         2344444442                 24456677777777765   4553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.76  E-value=0.0091  Score=54.83  Aligned_cols=112  Identities=16%  Similarity=0.038  Sum_probs=70.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccc----ccc-ceEEEccCCChhHHHhhhcCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMED----MFC-HEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~----~~~-v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      |||.|+|+ |++|..++..|...|+ +         |++++..........    ... .......+.-..++.+ ++++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~---------VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~a   70 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELAD---------LVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANS   70 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCe---------EEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCC
Confidence            58999996 9999999999999886 8         999997543211010    000 0000111111112333 5789


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      |+||-++|...   ....+..+.+..|+.....+++...+++.+ ..+|.+|-
T Consensus        71 DiVIitag~p~---~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~-~~iIv~tN  119 (305)
T TIGR01763        71 DIVVITAGLPR---KPGMSREDLLSMNAGIVREVTGRIMEHSPN-PIIVVVSN  119 (305)
T ss_pred             CEEEEcCCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEecC
Confidence            99999999532   122345567889999999999999888644 24555543

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.76  E-value=0.0054  Score=56.02  Aligned_cols=98  Identities=9%  Similarity=0.060  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCC--ccccccccccce-EEEccCC--ChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNK--NEHMMEDMFCHE-FHLVDLR--VMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~--~~~~~~~~~~v~-~~~~D~~--~~~~l~~~~~   95 (366)
                      +|+||.|.||+||.|..|++.|.... .+         +..++.+.  .+.......... .+...+.  +.+.+  ..+
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve---------~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~   69 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVE---------LILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELD   69 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeE---------EEEeechhhcCCchHHhCcccccccccccccCChhhh--hcc
Confidence            47899999999999999999888764 34         55544332  121111111111 1112222  22222  346


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      ++|+||.+....                   ....++..+...++   ++|=+|...
T Consensus        70 ~~DvvFlalPhg-------------------~s~~~v~~l~~~g~---~VIDLSadf  104 (349)
T COG0002          70 ECDVVFLALPHG-------------------VSAELVPELLEAGC---KVIDLSADF  104 (349)
T ss_pred             cCCEEEEecCch-------------------hHHHHHHHHHhCCC---eEEECCccc
Confidence            799999776631                   23445556656666   588888754

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.75  E-value=0.017  Score=50.78  Aligned_cols=102  Identities=9%  Similarity=-0.089  Sum_probs=66.4

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------------------------cccccc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------------------------EDMFCH   77 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------------------------~~~~~v   77 (366)
                      ||||.| .|.+|.++++.|...|...        ++++|...-....                           .+...+
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~--------i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i   71 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQ--------IHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKV   71 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCe--------EEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEE
Confidence            589999 5999999999999999641        7776643211000                           011234


Q ss_pred             eEEEccCCChhHH-HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCC
Q 044498           78 EFHLVDLRVMDNC-LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        78 ~~~~~D~~~~~~l-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~  156 (366)
                      +.+..++.+.+.+ ...++++|+||.+.-                  |...-..+-+.+...+++   +|..++.+.+|.
T Consensus        72 ~~~~~~i~~~~~~~~~f~~~~DvVi~a~D------------------n~~aR~~ln~~c~~~~ip---lI~~g~~G~~G~  130 (234)
T cd01484          72 VPYQNKVGPEQDFNDTFFEQFHIIVNALD------------------NIIARRYVNGMLIFLIVP---LIESGTEGFKGN  130 (234)
T ss_pred             EEEeccCChhhhchHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEcccCCceE
Confidence            4555666543332 345678898886644                  455666788888888875   888887665554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.73  E-value=0.0057  Score=56.99  Aligned_cols=96  Identities=10%  Similarity=0.007  Sum_probs=56.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHH-HcCCCCCCCCCccEEEEEeC--CCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLK-SERHYSTSIPNALYIIASDW--NKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~-~~g~~~~~~~~~~~V~~~~r--~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++|.|+||||.+|+.+++.|. ++.+..    .+  ++.++.  +..+.......  ....-++.+.    ..+.++|++
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~----~~--~~~~ss~~s~g~~~~f~~~--~~~v~~~~~~----~~~~~vDiv   68 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDA----IR--PVFFSTSQLGQAAPSFGGT--TGTLQDAFDI----DALKALDII   68 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCcc----cc--EEEEEchhhCCCcCCCCCC--cceEEcCccc----ccccCCCEE
Confidence            479999999999999999998 555430    01  344432  22222111111  2222233332    135789999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      +.+++                   -..+..+...+.+.|.. +.+|=-||.
T Consensus        69 ffa~g-------------------~~~s~~~~p~~~~aG~~-~~VIDnSSa   99 (366)
T TIGR01745        69 ITCQG-------------------GDYTNEIYPKLRESGWQ-GYWIDAASS   99 (366)
T ss_pred             EEcCC-------------------HHHHHHHHHHHHhCCCC-eEEEECChh
Confidence            99988                   34566788888888842 034544443

>PRK08223 hypothetical protein; Validated

Probab=96.72  E-value=0.016  Score=52.16  Aligned_cols=102  Identities=12%  Similarity=0.013  Sum_probs=63.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------c--ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------M--EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~--~~~   74 (366)
                      +..+|+|+|+ |-+|++++..|...|...        +.++|...-...                         .  .+.
T Consensus        26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG~--------i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~   96 (287)
T PRK08223         26 RNSRVAIAGL-GGVGGIHLLTLARLGIGK--------FTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPE   96 (287)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHhCCCe--------EEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCC
Confidence            4568999995 999999999999999641        666664321100                         0  011


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      ..++.+...++. +...++++++|+||.+.-..                +......+-++|..++++   +|+.|...
T Consensus        97 v~V~~~~~~l~~-~n~~~ll~~~DlVvD~~D~~----------------~~~~r~~ln~~c~~~~iP---~V~~~~~g  154 (287)
T PRK08223         97 LEIRAFPEGIGK-ENADAFLDGVDVYVDGLDFF----------------EFDARRLVFAACQQRGIP---ALTAAPLG  154 (287)
T ss_pred             CEEEEEecccCc-cCHHHHHhCCCEEEECCCCC----------------cHHHHHHHHHHHHHcCCC---EEEEeccC
Confidence            233444444443 44666778899988554310                123345677889999986   88876543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.68  E-value=0.0026  Score=54.07  Aligned_cols=67  Identities=18%  Similarity=0.123  Sum_probs=44.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc--ccceEEEccCCChhHHHhhhcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM--FCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~--~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ||++.|.| +|.||+.|+++|.+.||+         |+.-+|+.++......  .+..     +. .....++.+.+|+|
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~e---------V~igs~r~~~~~~a~a~~l~~~-----i~-~~~~~dA~~~aDVV   64 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHE---------VIIGSSRGPKALAAAAAALGPL-----IT-GGSNEDAAALADVV   64 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCe---------EEEecCCChhHHHHHHHhhccc-----cc-cCChHHHHhcCCEE
Confidence            46666665 899999999999999999         8888766654332211  1111     11 22344556789999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-...
T Consensus        65 vLAVP   69 (211)
T COG2085          65 VLAVP   69 (211)
T ss_pred             EEecc
Confidence            96655

>PRK07877 hypothetical protein; Provisional

Probab=96.66  E-value=0.015  Score=59.20  Aligned_cols=96  Identities=23%  Similarity=0.309  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccc--------------------------ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHM--------------------------MED   73 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~--------------------------~~~   73 (366)
                      +..+|+|+|. | +|++++..|...|.  +         +++++...-...                          ...
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~---------l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp  174 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGE---------LRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP  174 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCe---------EEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCC
Confidence            5578999999 8 99999999999884  4         666553211000                          001


Q ss_pred             cccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           74 MFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        74 ~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ...++.+...++ .+.+.++++++|+||.|.-                  |...-..|-++|.+.+++   +|+.++
T Consensus       175 ~i~v~~~~~~i~-~~n~~~~l~~~DlVvD~~D------------------~~~~R~~ln~~a~~~~iP---~i~~~~  229 (722)
T PRK07877        175 YLPVEVFTDGLT-EDNVDAFLDGLDVVVEECD------------------SLDVKVLLREAARARRIP---VLMATS  229 (722)
T ss_pred             CCEEEEEeccCC-HHHHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEcC
Confidence            224556666666 5678888899999997755                  344444667889999986   777664

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.66  E-value=0.0058  Score=57.88  Aligned_cols=68  Identities=15%  Similarity=0.087  Sum_probs=54.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |++|+|+|+ |.+|+.++..+.+.|++         |++++..++.......  -.++.+|+.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~---------v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYK---------VIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCE---------EEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            578999997 89999999999999999         9999876543222111  15777899999999999999998753

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.65  E-value=0.0098  Score=54.95  Aligned_cols=73  Identities=14%  Similarity=0.163  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC-hhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV-MDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~-~~~l~~~~~~~d~v  100 (366)
                      ...++||+||+|.+|..+++.+...|.+         |+++.+...........++..+. +..+ .+.+.+. .++|++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~d~v  230 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGAR---------VIAVTRSPEKLKILKELGADYVI-DGSKFSEDVKKL-GGADVV  230 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCe---------EEEEeCCHHHHHHHHHcCCcEEE-ecHHHHHHHHhc-cCCCEE
Confidence            3568999999999999999999999999         99888765433222211222111 2221 1222222 379999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      +++++
T Consensus       231 ~~~~g  235 (332)
T cd08259         231 IELVG  235 (332)
T ss_pred             EECCC
Confidence            99988

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.65  E-value=0.012  Score=53.75  Aligned_cols=89  Identities=20%  Similarity=0.232  Sum_probs=51.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH--hhhcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL--RMTSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~--~~~~~~d~v  100 (366)
                      |++|.|.||||.+|+.+++.|.++...   + .++++.+..|+.-+..      +++....+.-++...  ..++++|++
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~---~-~~~~~~AS~rSaG~~~------~~f~~~~~~v~~~~~~~~~~~~~Div   70 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFP---F-EELVLLASARSAGKKY------IEFGGKSIGVPEDAADEFVFSDVDIV   70 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCC---c-ceEEEEecccccCCcc------ccccCccccCccccccccccccCCEE
Confidence            478999999999999999999987543   0 1122333334332221      022211111122111  123489999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV  140 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~  140 (366)
                      +.++|.                   ..+..+...+.+.|+
T Consensus        71 f~~ag~-------------------~~s~~~~p~~~~~G~   91 (334)
T COG0136          71 FFAAGG-------------------SVSKEVEPKAAEAGC   91 (334)
T ss_pred             EEeCch-------------------HHHHHHHHHHHHcCC
Confidence            999982                   234667778888875

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.63  E-value=0.0095  Score=57.59  Aligned_cols=66  Identities=18%  Similarity=0.158  Sum_probs=46.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |+|+|+||+|.+|..+++.|.+.|++         |++++|++...... ...++.     .  .......+.++|+||-
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~---------V~v~~r~~~~~~~~a~~~gv~-----~--~~~~~e~~~~aDvVIl   64 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFE---------VIVTGRDPKKGKEVAKELGVE-----Y--ANDNIDAAKDADIVII   64 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCE---------EEEEECChHHHHHHHHHcCCe-----e--ccCHHHHhccCCEEEE
Confidence            58999999999999999999999999         99999876432111 111221     1  1123345677899887


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        65 avp   67 (437)
T PRK08655         65 SVP   67 (437)
T ss_pred             ecC
Confidence            765

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.62  E-value=0.029  Score=51.49  Aligned_cols=97  Identities=11%  Similarity=-0.027  Sum_probs=67.5

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----ccc-------ccceEEEccCCChhHHH
Q 044498           25 RISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDM-------FCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~-------~~v~~~~~D~~~~~~l~   91 (366)
                      ||.|+|+ |.||+.++..|+.++.  +         +..++........    ..+       ..+.+..+   ++    
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~e---------lvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y----   63 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSE---------IVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DY----   63 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CH----
Confidence            5899998 9999999999998774  5         8888875542211    111       11222222   22    


Q ss_pred             hhhcCCCEEEEcccccCCccccccC--cchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSN--HSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~--~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +.++++|+||-+||....   ...+  ..+.+..|....+.+.....+++..
T Consensus        64 ~~~~~aDivvitaG~~~k---pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~  112 (307)
T cd05290          64 DDCADADIIVITAGPSID---PGNTDDRLDLAQTNAKIIREIMGNITKVTKE  112 (307)
T ss_pred             HHhCCCCEEEECCCCCCC---CCCCchHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            346899999999996421   1223  4778999999999999999999865

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.62  E-value=0.011  Score=59.63  Aligned_cols=73  Identities=11%  Similarity=0.060  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi  101 (366)
                      .++|+|.| .|-+|+.+++.|.++|++         +++++++++.-......+..++.+|.++++.++++ +++++.+|
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~---------vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv  469 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMANKMR---------ITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIV  469 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhCCCC---------EEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEE
Confidence            46799999 599999999999999999         99999887755444456778999999999988886 57899988


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus       470 ~~~~  473 (601)
T PRK03659        470 ITCN  473 (601)
T ss_pred             EEeC
Confidence            5544

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.59  E-value=0.013  Score=56.12  Aligned_cols=157  Identities=7%  Similarity=-0.034  Sum_probs=92.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-cc-----c------cccceEEEccCCChhH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-ME-----D------MFCHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~~-----~------~~~v~~~~~D~~~~~~   89 (366)
                      ...+|+||||+|.||.+|+-.+..- . .+-.+..+.+..++....... ..     .      ...+.+..   .+   
T Consensus       122 ~p~~V~vtgAag~i~Y~l~~~ia~G-~-~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~---~~---  193 (452)
T cd05295         122 NPLQVCITNASAPLCYHLIPSLASG-E-VFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT---DL---  193 (452)
T ss_pred             CceEEEEecCcHHHHHHHHHHHhCC-c-ccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE---CC---
Confidence            4468999999999999999887762 1 111123444666776422111 00     0      00122221   11   


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc----cCCCCCCCCCcc
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI----YPEFKQLDTDVK  165 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v----yg~~~~~~~~~~  165 (366)
                       ...++++|+||-+||..-   ....+..+.+..|......+.++..+++.++.+++.+.|-=+    |-..       .
T Consensus       194 -~ea~~daDvvIitag~pr---k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~-------k  262 (452)
T cd05295         194 -DVAFKDAHVIVLLDDFLI---KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILI-------K  262 (452)
T ss_pred             -HHHhCCCCEEEECCCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHH-------H
Confidence             245789999999999642   334567888999999999999999998862227777765100    0000       0


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCc
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIE  199 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~  199 (366)
                      ..  ....+.+..|.+.+..-++....++..+++
T Consensus       263 ~a--pgiP~~rVig~gtlds~R~r~~LA~kl~V~  294 (452)
T cd05295         263 YA--PSIPRKNIIAVARLQENRAKALLARKLNVN  294 (452)
T ss_pred             Hc--CCCCHHHEEEecchHHHHHHHHHHHHhCcC
Confidence            00  012234555666566556666666666654

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.58  E-value=0.03  Score=46.90  Aligned_cols=101  Identities=16%  Similarity=0.079  Sum_probs=62.6

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------------------------c--cccccce
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------------------------M--EDMFCHE   78 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------------------------~--~~~~~v~   78 (366)
                      +|+|+|+ |-+|+++++.|...|...        ++.+|...-...                        .  .....++
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~--------i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~   71 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGN--------LKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIE   71 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCe--------EEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEE
Confidence            5899995 999999999999999631        777765431000                        0  0112233


Q ss_pred             EEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCC
Q 044498           79 FHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        79 ~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~  156 (366)
                      .+...++. +.+.+.++++|+||.+..                  |...-..+.+.+.+. +++   ||+.+...-||.
T Consensus        72 ~~~~~~~~-~~~~~~l~~~DlVi~~~d------------------~~~~r~~i~~~~~~~~~ip---~i~~~~~~~~~~  128 (174)
T cd01487          72 AINIKIDE-NNLEGLFGDCDIVVEAFD------------------NAETKAMLAESLLGNKNKP---VVCASGMAGFGD  128 (174)
T ss_pred             EEEeecCh-hhHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHHCCCC---EEEEehhhccCC
Confidence            44444433 456667788999997743                  234444567777666 775   887665544544

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.58  E-value=0.018  Score=50.67  Aligned_cols=91  Identities=13%  Similarity=0.122  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      +||||.|.|++|-.|+.+++.+.+.. .+.        +-+++|........   ...++.....-+.+.  +......+
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L--------~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~~--~~~~~~~~   70 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLEL--------VAAFDRPGSLSLGSDAGELAGLGLLGVPVTDD--LLLVKADA   70 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceE--------EEEEecCCccccccchhhhccccccCceeecc--hhhcccCC
Confidence            36899999999999999999998764 451        44566655432111   001111222222222  33445689


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      |++|.+..                   ..++...++.|.+++++
T Consensus        71 DV~IDFT~-------------------P~~~~~~l~~~~~~~~~   95 (266)
T COG0289          71 DVLIDFTT-------------------PEATLENLEFALEHGKP   95 (266)
T ss_pred             CEEEECCC-------------------chhhHHHHHHHHHcCCC
Confidence            99999877                   45677899999999976

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.57  E-value=0.023  Score=53.60  Aligned_cols=102  Identities=17%  Similarity=0.131  Sum_probs=67.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccc-------------------------c--cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHM-------------------------M--ED   73 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~-------------------------~--~~   73 (366)
                      +..+|+|+|+ |-+|+++++.|...|. +         +++++...-...                         .  ..
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~---------i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np  109 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGT---------ITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP  109 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCE---------EEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC
Confidence            4568999995 9999999999999996 4         777765321100                         0  01


Q ss_pred             cccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498           74 MFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        74 ~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      ...++.+...++ .+.+.++++++|+||.|.-                  |...-..+-++|.+.+++   +|+.+....
T Consensus       110 ~v~i~~~~~~i~-~~~~~~~~~~~DlVid~~D------------------n~~~r~~in~~~~~~~iP---~v~~~~~g~  167 (370)
T PRK05600        110 DIRVNALRERLT-AENAVELLNGVDLVLDGSD------------------SFATKFLVADAAEITGTP---LVWGTVLRF  167 (370)
T ss_pred             CCeeEEeeeecC-HHHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEEecC
Confidence            123344444444 3456677889999997766                  344444566788888885   888776544


Q ss_pred             cC
Q 044498          154 YP  155 (366)
Q Consensus       154 yg  155 (366)
                      +|
T Consensus       168 ~G  169 (370)
T PRK05600        168 HG  169 (370)
T ss_pred             EE
Confidence            44

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.57  E-value=0.0081  Score=54.09  Aligned_cols=99  Identities=11%  Similarity=0.104  Sum_probs=70.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-cccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-MMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      .+++|.|+|+.| +|+--++.-...|++         |++++++..+. ......+.+.+.....|++.+.++.+-.|.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~r---------V~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~  250 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMR---------VTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGG  250 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcE---------EEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCc
Confidence            678999999999 999998888889999         99999987443 3345577788887777888888877655666


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +|++....                ......++..++..|    ++|+++=
T Consensus       251 ~~~v~~~a----------------~~~~~~~~~~lk~~G----t~V~vg~  280 (360)
T KOG0023|consen  251 IDTVSNLA----------------EHALEPLLGLLKVNG----TLVLVGL  280 (360)
T ss_pred             ceeeeecc----------------ccchHHHHHHhhcCC----EEEEEeC
Confidence            65554211                111223666666655    6898775

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.54  E-value=0.012  Score=58.82  Aligned_cols=73  Identities=7%  Similarity=-0.143  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi  101 (366)
                      .-+|+|.| .|-+|+++++.|.++|++         |++++.++++.......+...+.+|.++++.++++ ++++|.++
T Consensus       417 ~~hiiI~G-~G~~G~~la~~L~~~g~~---------vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~vi  486 (558)
T PRK10669        417 CNHALLVG-YGRVGSLLGEKLLAAGIP---------LVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLL  486 (558)
T ss_pred             CCCEEEEC-CChHHHHHHHHHHHCCCC---------EEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEE
Confidence            35799999 599999999999999999         99999887655444456789999999999988875 56899887


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus       487 v~~~  490 (558)
T PRK10669        487 LTIP  490 (558)
T ss_pred             EEcC
Confidence            4433

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.54  E-value=0.018  Score=53.02  Aligned_cols=54  Identities=13%  Similarity=0.103  Sum_probs=43.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      +.|+|.|+| +|.+|+.++..|.+.|++         |++++|+..                    ..+.++++++|+||
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~---------V~~~~r~~~--------------------~~~~~~~~~advvi   52 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGHR---------VRVWSRRSG--------------------LSLAAVLADADVIV   52 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCE---------EEEEeCCCC--------------------CCHHHHHhcCCEEE
Confidence            457899998 699999999999999999         999988642                    12445567889999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus        53 ~~vp   56 (308)
T PRK14619         53 SAVS   56 (308)
T ss_pred             EECC
Confidence            7765

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.48  E-value=0.0059  Score=58.64  Aligned_cols=38  Identities=29%  Similarity=0.286  Sum_probs=33.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM   70 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~   70 (366)
                      +|+|.|+| .|++|..++..|.+.|++         |+++++++....
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~---------V~~~D~~~~~v~   40 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQ---------VIGVDINQHAVD   40 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCE---------EEEEeCCHHHHH
Confidence            57899998 699999999999999999         999998776443

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.48  E-value=0.033  Score=48.84  Aligned_cols=98  Identities=11%  Similarity=-0.003  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------c--ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------M--EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~--~~~   74 (366)
                      +..+|+|+| .|-+|+++++.|...|...        ++++|...-...                         .  .+.
T Consensus        10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~--------i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~   80 (231)
T cd00755          10 RNAHVAVVG-LGGVGSWAAEALARSGVGK--------LTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPE   80 (231)
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCE--------EEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCC
Confidence            456899999 5999999999999999631        667664321100                         0  011


Q ss_pred             ccceEEEccCCChhHHHhhh-cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           75 FCHEFHLVDLRVMDNCLRMT-SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~-~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ..++.+...++ ++.+..++ .++|+||.+..                  |......|.++|++++++   ||...+
T Consensus        81 ~~V~~~~~~i~-~~~~~~l~~~~~D~VvdaiD------------------~~~~k~~L~~~c~~~~ip---~I~s~g  135 (231)
T cd00755          81 CEVDAVEEFLT-PDNSEDLLGGDPDFVVDAID------------------SIRAKVALIAYCRKRKIP---VISSMG  135 (231)
T ss_pred             cEEEEeeeecC-HhHHHHHhcCCCCEEEEcCC------------------CHHHHHHHHHHHHHhCCC---EEEEeC
Confidence            22334444443 33445554 36899997755                  244456788999999885   776544

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.46  E-value=0.0042  Score=50.85  Aligned_cols=73  Identities=11%  Similarity=0.015  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ..++|+|+|+ |.+|..+++.|.+.| ++         |.+++|+....... ...+...+..+..+.   .+.++++|+
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~---------v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv   84 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAK---------IVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADL   84 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCE---------EEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCE
Confidence            4678999997 999999999999986 77         99998875533221 111111112233333   334688999


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      ||.+....
T Consensus        85 vi~~~~~~   92 (155)
T cd01065          85 IINTTPVG   92 (155)
T ss_pred             EEeCcCCC
Confidence            99998853

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.45  E-value=0.031  Score=53.28  Aligned_cols=104  Identities=15%  Similarity=0.135  Sum_probs=67.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------c--ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------M--EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~--~~~   74 (366)
                      +..+|+|+|+ |-+|++++..|...|...        ++++|...-...                         .  .+.
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~--------i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~  111 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAAGVGT--------LGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPL  111 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHcCCCe--------EEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCC
Confidence            4568999995 999999999999998641        666654321100                         0  011


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...++. +...++++++|+||.+..                  |...-..+-++|.+.+++   ||+.+....+
T Consensus       112 v~i~~~~~~i~~-~~~~~~~~~~D~Vvd~~d------------------~~~~r~~ln~~~~~~~~p---~v~~~~~g~~  169 (392)
T PRK07878        112 VNVRLHEFRLDP-SNAVELFSQYDLILDGTD------------------NFATRYLVNDAAVLAGKP---YVWGSIYRFE  169 (392)
T ss_pred             cEEEEEeccCCh-hHHHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEeccCE
Confidence            223344445543 345667788999997654                  233444566888888875   9988876666


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       170 G~  171 (392)
T PRK07878        170 GQ  171 (392)
T ss_pred             EE
Confidence            64

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.45  E-value=0.0091  Score=49.61  Aligned_cols=56  Identities=11%  Similarity=0.086  Sum_probs=46.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ...++|+|+|+++.+|..+++.|.++|.+         |+++.|..                     +++.+.+.++|+|
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~---------V~v~~r~~---------------------~~l~~~l~~aDiV   91 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNAT---------VTVCHSKT---------------------KNLKEHTKQADIV   91 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCE---------EEEEECCc---------------------hhHHHHHhhCCEE
Confidence            36789999999778899999999999988         98888651                     3466778899999


Q ss_pred             EEcccc
Q 044498          101 SNLAAD  106 (366)
Q Consensus       101 i~~a~~  106 (366)
                      |.+.+.
T Consensus        92 Isat~~   97 (168)
T cd01080          92 IVAVGK   97 (168)
T ss_pred             EEcCCC
Confidence            988884

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.45  E-value=0.014  Score=53.47  Aligned_cols=104  Identities=14%  Similarity=0.078  Sum_probs=70.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccccc----cc-----ccceEEEccCCChhHHHhhh
Q 044498           26 ISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMME----DM-----FCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~----~~-----~~v~~~~~D~~~~~~l~~~~   94 (366)
                      |.|+|+ |.+|+.++..|+..|  .+         +.+++.........    ..     ....+...  .+    ...+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~e---------l~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l   64 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASE---------LVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADA   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHh
Confidence            568896 899999999999888  57         99999866532111    00     00111111  11    2357


Q ss_pred             cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +++|+||.++|...   ....+..+.+..|+...+.+.+.+++++.+ ..+|.+|
T Consensus        65 ~~aDiVIitag~p~---~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~-~~viv~s  115 (300)
T cd00300          65 ADADIVVITAGAPR---KPGETRLDLINRNAPILRSVITNLKKYGPD-AIILVVS  115 (300)
T ss_pred             CCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEcc
Confidence            89999999999543   223466778889999999999999998854 3455544

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.42  E-value=0.013  Score=54.57  Aligned_cols=96  Identities=9%  Similarity=0.060  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCCh----hHHHhhh-c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVM----DNCLRMT-S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~----~~l~~~~-~   95 (366)
                      .+.+|||+||+|.+|..+++.+...|.+         |++++++..+...... .++..+ .|..+.    +.+.+.. .
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~---------Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCY---------VVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPN  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCC
Confidence            4578999999999999999988888998         9988876554332222 333332 222211    2233322 3


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ++|+|+++.|.                   ......++.++..|    +++.++.
T Consensus       221 gvd~v~d~~g~-------------------~~~~~~~~~l~~~G----~iv~~G~  252 (338)
T cd08295         221 GIDIYFDNVGG-------------------KMLDAVLLNMNLHG----RIAACGM  252 (338)
T ss_pred             CcEEEEECCCH-------------------HHHHHHHHHhccCc----EEEEecc
Confidence            68999998772                   22344556665554    7887664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.42  E-value=0.028  Score=53.33  Aligned_cols=103  Identities=17%  Similarity=0.044  Sum_probs=65.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc-------------------c------ccc--cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE-------------------H------MME--DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-------------------~------~~~--~~   74 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        ++++++..-.                   .      ...  ..
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~--------i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~  204 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGT--------LGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD  204 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCe--------EEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC
Confidence            4568999985 889999999999999641        7777765210                   0      000  11


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...+. .+.+..+++++|+||++..                  |...-..+-++|.+.+++   +|+.+....+
T Consensus       205 v~v~~~~~~~~-~~~~~~~~~~~D~Vv~~~d------------------~~~~r~~ln~~~~~~~ip---~i~~~~~g~~  262 (376)
T PRK08762        205 VQVEAVQERVT-SDNVEALLQDVDVVVDGAD------------------NFPTRYLLNDACVKLGKP---LVYGAVFRFE  262 (376)
T ss_pred             CEEEEEeccCC-hHHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEeccCE
Confidence            12233333333 3456667788999998766                  223334577889999985   8888765544


Q ss_pred             C
Q 044498          155 P  155 (366)
Q Consensus       155 g  155 (366)
                      |
T Consensus       263 g  263 (376)
T PRK08762        263 G  263 (376)
T ss_pred             E
Confidence            4

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.40  E-value=0.0031  Score=53.37  Aligned_cols=35  Identities=26%  Similarity=0.508  Sum_probs=27.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      |||.|+| .||+|..++..|.+.|++         |++++.++..
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~---------V~g~D~~~~~   35 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQ---------VIGVDIDEEK   35 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSE---------EEEE-S-HHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCE---------EEEEeCChHH
Confidence            6899998 799999999999999999         9999987653

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.38  E-value=0.0082  Score=54.86  Aligned_cols=69  Identities=12%  Similarity=0.044  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|+|+|. |.+|+.++..|...|.+         |++++|+..........+..++     ..+.+.+.+.++|+||
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~---------V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI  215 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGAN---------VTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIF  215 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEE
Confidence            5689999996 88999999999999999         9999988654322222233332     2345667778999999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      +++.
T Consensus       216 ~t~p  219 (296)
T PRK08306        216 NTIP  219 (296)
T ss_pred             ECCC
Confidence            9864

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.37  E-value=0.019  Score=52.30  Aligned_cols=80  Identities=13%  Similarity=0.088  Sum_probs=51.5

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           25 RISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      ||.|.|||||.|..|++.|.... .+         +..+.....              .+   +.+..++++++|++|.+
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~e---------l~~l~s~~~--------------~~---~~~~~~~~~~~D~vFla   56 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIE---------LLSIAPDRR--------------KD---AAERAKLLNAADVAILC   56 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeE---------EEEEecccc--------------cC---cCCHhHhhcCCCEEEEC
Confidence            79999999999999999888753 34         554432211              11   11233455789999977


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      .+.                   .....++..+.+.++   ++|=.|+..
T Consensus        57 lp~-------------------~~s~~~~~~~~~~g~---~VIDlSadf   83 (310)
T TIGR01851        57 LPD-------------------DAAREAVSLVDNPNT---CIIDASTAY   83 (310)
T ss_pred             CCH-------------------HHHHHHHHHHHhCCC---EEEECChHH
Confidence            762                   233455566656666   588788753

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.35  E-value=0.028  Score=52.16  Aligned_cols=96  Identities=14%  Similarity=0.091  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh---hHHHhhhc--CC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM---DNCLRMTS--GV   97 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~---~~l~~~~~--~~   97 (366)
                      ..+|||+||+|-+|+..++-+...|..         +++...++.+.......+...+.- +.+.   +.+.++..  ++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~---------~v~~~~s~~k~~~~~~lGAd~vi~-y~~~~~~~~v~~~t~g~gv  212 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGAT---------VVAVVSSSEKLELLKELGADHVIN-YREEDFVEQVRELTGGKGV  212 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCc---------EEEEecCHHHHHHHHhcCCCEEEc-CCcccHHHHHHHHcCCCCc
Confidence            678999999999999999988888966         666655554333444444343332 3332   23333433  69


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      |+|+...|-                   ......+++++..+    +++.+...
T Consensus       213 Dvv~D~vG~-------------------~~~~~~l~~l~~~G----~lv~ig~~  243 (326)
T COG0604         213 DVVLDTVGG-------------------DTFAASLAALAPGG----RLVSIGAL  243 (326)
T ss_pred             eEEEECCCH-------------------HHHHHHHHHhccCC----EEEEEecC
Confidence            999999882                   22334555555443    78876664

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.31  E-value=0.013  Score=54.34  Aligned_cols=96  Identities=8%  Similarity=0.122  Sum_probs=60.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC---hhH-HHhhh-cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV---MDN-CLRMT-SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~---~~~-l~~~~-~~   96 (366)
                      ...+|||+||+|-+|..+++.+...|.+         |++++++..+.......++..+ .|..+   ... +.... ++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~---------Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~g  207 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCK---------VVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDG  207 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCC
Confidence            4578999999999999999888888998         9988876554333333343322 22222   222 22222 36


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +|+|+.+.|.                   ......++.++..|    ++|.++.
T Consensus       208 vdvv~d~~G~-------------------~~~~~~~~~l~~~G----~iv~~G~  238 (325)
T TIGR02825       208 YDCYFDNVGG-------------------EFSNTVIGQMKKFG----RIAICGA  238 (325)
T ss_pred             eEEEEECCCH-------------------HHHHHHHHHhCcCc----EEEEecc
Confidence            8999998872                   12234555555554    7887665

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.28  E-value=0.0094  Score=54.20  Aligned_cols=69  Identities=10%  Similarity=0.041  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|+|+|. |.+|+.+++.|...|.+         |++.+|+..........+...+     ..+.+.+.++++|+||
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~---------V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVi  214 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGAR---------VFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVI  214 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEE
Confidence            5689999996 88999999999999999         9999987653222111122211     2345667788999999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      ++..
T Consensus       215 nt~P  218 (287)
T TIGR02853       215 NTIP  218 (287)
T ss_pred             ECCC
Confidence            9865

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.26  E-value=0.01  Score=56.04  Aligned_cols=75  Identities=12%  Similarity=-0.047  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ...+|+|+|+ |-+|...++.|...|.+         |+++++...+........-..+..+..+.+.+.+.+.++|+||
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~---------V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGAT---------VTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLI  235 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCe---------EEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEE
Confidence            3467999986 99999999999999999         9999987654222111101223345667778888889999999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      ++++.
T Consensus       236 ~a~~~  240 (370)
T TIGR00518       236 GAVLI  240 (370)
T ss_pred             Ecccc
Confidence            98864

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.26  E-value=0.019  Score=51.63  Aligned_cols=66  Identities=20%  Similarity=0.152  Sum_probs=44.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC---CCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER---HYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g---~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ||+|.|+| .|.+|..+++.|.+.|   ++         |.+++|+......... .++..     .  ....+.++++|
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~---------v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~ad   64 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKD---------IIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEAD   64 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcce---------EEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCC
Confidence            67899999 5999999999999988   66         8899887644322111 12211     1  12233456889


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||-+..
T Consensus        65 vVil~v~   71 (267)
T PRK11880         65 VVVLAVK   71 (267)
T ss_pred             EEEEEcC
Confidence            9986654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.24  E-value=0.065  Score=48.01  Aligned_cols=98  Identities=16%  Similarity=0.068  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccc-------------------------c--c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMM-------------------------E--D   73 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~-------------------------~--~   73 (366)
                      +..+|+|+| .|.+|+++++.|...|. +         +++++...-....                         .  .
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~---------itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP   98 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGA---------ITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINP   98 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCE---------EEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCC
Confidence            557899999 59999999999999994 4         7776643211000                         0  0


Q ss_pred             cccceEEEccCCChhHHHhhhc-CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           74 MFCHEFHLVDLRVMDNCLRMTS-GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        74 ~~~v~~~~~D~~~~~~l~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      ...+..+. +..+++.+..++. ++|+||.+...                  +..-..|.+.|++++++   ||.++++
T Consensus        99 ~~~V~~i~-~~i~~e~~~~ll~~~~D~VIdaiD~------------------~~~k~~L~~~c~~~~ip---~I~~gGa  155 (268)
T PRK15116         99 ECRVTVVD-DFITPDNVAEYMSAGFSYVIDAIDS------------------VRPKAALIAYCRRNKIP---LVTTGGA  155 (268)
T ss_pred             CcEEEEEe-cccChhhHHHHhcCCCCEEEEcCCC------------------HHHHHHHHHHHHHcCCC---EEEECCc
Confidence            11122332 2223455555554 68999977662                  34455688999999885   7765443

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.21  E-value=0.025  Score=57.28  Aligned_cols=73  Identities=16%  Similarity=0.074  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi  101 (366)
                      ..+|+|.| .|-+|+.+++.|.++|++         +++++.++..-......+..++.+|.++++.++++ +++++.+|
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~---------vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv  469 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSSGVK---------MTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLI  469 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhCCCC---------EEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEE
Confidence            46799999 599999999999999999         99999887765544455779999999999988865 56899888


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus       470 v~~~  473 (621)
T PRK03562        470 NAID  473 (621)
T ss_pred             EEeC
Confidence            5544

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.20  E-value=0.013  Score=56.98  Aligned_cols=71  Identities=8%  Similarity=-0.119  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhhc-C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMTS-G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~~-~   96 (366)
                      ++++|+|||++| +|...++.|.+.|++         |.+.++......    .....++.+..+..  ...   .+. +
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~---------V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~---~~~~~   68 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGAN---------VTVNDGKPFSENPEAQELLEEGIKVICGSH--PLE---LLDED   68 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCE---------EEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHH---HhcCc
Confidence            467899999987 999999999999999         999987543211    11222445544321  111   123 4


Q ss_pred             CCEEEEccccc
Q 044498           97 VDNMSNLAADM  107 (366)
Q Consensus        97 ~d~vi~~a~~~  107 (366)
                      +|.||..+|..
T Consensus        69 ~d~vV~s~gi~   79 (447)
T PRK02472         69 FDLMVKNPGIP   79 (447)
T ss_pred             CCEEEECCCCC
Confidence            89999999854

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.18  E-value=0.017  Score=53.23  Aligned_cols=67  Identities=9%  Similarity=0.014  Sum_probs=55.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |++|.|+|| |.+|+=++..-...|++         |++++-.++........  ..+..+.+|.+++.++.+.+|+|=
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~---------v~vLdp~~~~PA~~va~--~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIK---------VIVLDPDADAPAAQVAD--RVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCE---------EEEecCCCCCchhhccc--ceeecCCCCHHHHHHHHhhCCEEE
Confidence            578999995 99999999999999999         99998666544333222  678889999999999999999885

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.17  E-value=0.023  Score=52.48  Aligned_cols=74  Identities=9%  Similarity=0.086  Sum_probs=49.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh-cCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT-SGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~-~~~   97 (366)
                      ...+|||+||+|-+|..+++.+...|.+         |++++++..+.......++..+ .|..+.+   .+.+.. .++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~---------vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gv  212 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCK---------VIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGI  212 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCc
Confidence            4578999999999999999988889998         9988876654333322333332 2333222   232222 368


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+|+++.|
T Consensus       213 d~vld~~g  220 (329)
T cd08294         213 DCYFDNVG  220 (329)
T ss_pred             EEEEECCC
Confidence            99999877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07574 formate dehydrogenase; Provisional

Probab=96.16  E-value=0.024  Score=53.62  Aligned_cols=68  Identities=18%  Similarity=0.131  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..|+|.|+| .|-||+.+++.|...|.+         |.+++|...........+       +.-...+.++++.+|+|+
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~---------V~~~dr~~~~~~~~~~~g-------~~~~~~l~ell~~aDvV~  253 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVK---------LHYTDRHRLPEEVEQELG-------LTYHVSFDSLVSVCDVVT  253 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCE---------EEEECCCCCchhhHhhcC-------ceecCCHHHHhhcCCEEE
Confidence            678999999 599999999999999999         999998753221111111       111234777889999999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+...
T Consensus       254 l~lPl  258 (385)
T PRK07574        254 IHCPL  258 (385)
T ss_pred             EcCCC
Confidence            87774

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.11  E-value=0.023  Score=54.31  Aligned_cols=71  Identities=18%  Similarity=0.150  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      .+|+|+|+|+ |..|..++..+.+.|++         |++++..+.........  .++..|..|.+.+.++++  ++|.
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~---------v~~~~~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~   78 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVE---------VIAVDRYANAPAMQVAH--RSHVIDMLDGDALRAVIEREKPDY   78 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeCCCCCchHHhhh--heEECCCCCHHHHHHHHHHhCCCE
Confidence            5679999995 89999999999999999         99998765432211111  456788889888888776  7999


Q ss_pred             EEEcc
Q 044498          100 MSNLA  104 (366)
Q Consensus       100 vi~~a  104 (366)
                      |+-..
T Consensus        79 vi~~~   83 (395)
T PRK09288         79 IVPEI   83 (395)
T ss_pred             EEEee
Confidence            88543

>PRK07411 hypothetical protein; Validated

Probab=96.09  E-value=0.055  Score=51.50  Aligned_cols=104  Identities=13%  Similarity=0.059  Sum_probs=66.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------------------c--ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------------------M--EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------------------~--~~~   74 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        ++++|...-...                         .  ...
T Consensus        37 ~~~~VlivG~-GGlG~~va~~La~~Gvg~--------l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~  107 (390)
T PRK07411         37 KAASVLCIGT-GGLGSPLLLYLAAAGIGR--------IGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPY  107 (390)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCE--------EEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCC
Confidence            4568999995 899999999999999641        666654321100                         0  011


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...++. +...+++.++|+||.|..                  |...-..+-++|.+.+++   +|+.+....|
T Consensus       108 v~v~~~~~~~~~-~~~~~~~~~~D~Vvd~~d------------------~~~~r~~ln~~~~~~~~p---~v~~~~~g~~  165 (390)
T PRK07411        108 CQVDLYETRLSS-ENALDILAPYDVVVDGTD------------------NFPTRYLVNDACVLLNKP---NVYGSIFRFE  165 (390)
T ss_pred             CeEEEEecccCH-HhHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEEccCE
Confidence            234455555554 345566789999997766                  233334466788888875   8887765555


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       166 g~  167 (390)
T PRK07411        166 GQ  167 (390)
T ss_pred             EE
Confidence            43

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.09  E-value=0.044  Score=49.32  Aligned_cols=88  Identities=10%  Similarity=0.116  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEE-EeCCCccccc-c--ccccceEEEcc-CCChhHHHhhhcC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIA-SDWNKNEHMM-E--DMFCHEFHLVD-LRVMDNCLRMTSG   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~-~~r~~~~~~~-~--~~~~v~~~~~D-~~~~~~l~~~~~~   96 (366)
                      |+||.|+|++|.+|+.+++.+.+. +.+         +.+ ++|....... .  ...+..-..+. ..+.+.+   ...
T Consensus         1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~e---------lvav~d~~~~~~~~~~~~~~~~~~~~gv~~~~d~~~l---~~~   68 (266)
T TIGR00036         1 TIKVAVAGAAGRMGRELIKAALAAEGLQ---------LVAAFERHGSSLQGTDAGELAGIGKVGVPVTDDLEAV---ETD   68 (266)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCE---------EEEEEecCCccccCCCHHHhcCcCcCCceeeCCHHHh---cCC
Confidence            469999999999999999999874 677         655 4433321110 0  00000000011 1233333   356


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +|+||.+..                   ......++..|.++++.
T Consensus        69 ~DvVIdfT~-------------------p~~~~~~~~~al~~g~~   94 (266)
T TIGR00036        69 PDVLIDFTT-------------------PEGVLNHLKFALEHGVR   94 (266)
T ss_pred             CCEEEECCC-------------------hHHHHHHHHHHHHCCCC
Confidence            999998875                   34556788888888875

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.07  E-value=0.028  Score=51.46  Aligned_cols=68  Identities=16%  Similarity=0.130  Sum_probs=48.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|.|+| .|.+|..+++.|.+.|++         |.+++|++.........++..    ..+.+++...+..+|+||-+
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~---------V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~   66 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHD---------CVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVM   66 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEE
Confidence            4799999 699999999999999999         999998876433222221111    13445555556778999977


Q ss_pred             cc
Q 044498          104 AA  105 (366)
Q Consensus       104 a~  105 (366)
                      ..
T Consensus        67 vp   68 (298)
T TIGR00872        67 VP   68 (298)
T ss_pred             cC
Confidence            55

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.06  E-value=0.023  Score=54.64  Aligned_cols=35  Identities=23%  Similarity=0.408  Sum_probs=31.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      |+|.|+| .|++|..++..|.+.|++         |+++++++..
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~---------V~~~d~~~~~   35 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHE---------VTGVDIDQEK   35 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCe---------EEEEECCHHH
Confidence            4799998 699999999999999999         9999987654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.03  E-value=0.042  Score=50.78  Aligned_cols=74  Identities=18%  Similarity=0.156  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH---hhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL---RMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~---~~~--~~   96 (366)
                      .+.+|+|+|++|-+|..+++.+...|.+         |++++++..+.......+... ..|..+.+...   +..  .+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~---------v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  235 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGAT---------VIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRG  235 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999         988887654322211112221 23444433322   222  26


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|.++++++
T Consensus       236 ~d~~i~~~g  244 (342)
T cd08266         236 VDVVVEHVG  244 (342)
T ss_pred             CcEEEECCc
Confidence            899999988

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK06849 hypothetical protein; Provisional

Probab=96.03  E-value=0.017  Score=55.08  Aligned_cols=77  Identities=14%  Similarity=0.057  Sum_probs=49.7

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEc--cCCCh----hHHHhh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLV--DLRVM----DNCLRM   93 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~--D~~~~----~~l~~~   93 (366)
                      |..+|+|||||+...+|..+++.|.+.|++         |++++..+.........--.++..  .-.+.    +.+.++
T Consensus         1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~---------Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i   71 (389)
T PRK06849          1 MNTKKTVLITGARAPAALELARLFHNAGHT---------VILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSI   71 (389)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999         999987754321111100123333  12232    334343


Q ss_pred             hc--CCCEEEEccc
Q 044498           94 TS--GVDNMSNLAA  105 (366)
Q Consensus        94 ~~--~~d~vi~~a~  105 (366)
                      .+  ++|+||-+..
T Consensus        72 ~~~~~id~vIP~~e   85 (389)
T PRK06849         72 VQRENIDLLIPTCE   85 (389)
T ss_pred             HHHcCCCEEEECCh
Confidence            33  6899997654

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.02  E-value=0.08  Score=46.29  Aligned_cols=92  Identities=17%  Similarity=0.196  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc-ccccccccceEEEccCCChhHHHhhhc--CCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE-HMMEDMFCHEFHLVDLRVMDNCLRMTS--GVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d   98 (366)
                      ++|+|+|.|||+= ++.|+++|...+..         +++.+-.... .+..+.  ...+.+-..+.+.+.+.++  ++|
T Consensus         1 ~~~~ilvlGGT~D-ar~la~~L~~~~~~---------~~~ss~t~~g~~l~~~~--~~~~~~G~l~~e~l~~~l~e~~i~   68 (257)
T COG2099           1 SMMRILLLGGTSD-ARALAKKLAAAPVD---------IILSSLTGYGAKLAEQI--GPVRVGGFLGAEGLAAFLREEGID   68 (257)
T ss_pred             CCceEEEEeccHH-HHHHHHHhhccCcc---------EEEEEcccccccchhcc--CCeeecCcCCHHHHHHHHHHcCCC
Confidence            3578999999874 88999999988755         4444322221 111111  1466778888899999885  799


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      .+|...=.                --.+.+.|.+++|++.+++
T Consensus        69 llIDATHP----------------yAa~iS~Na~~aake~gip   95 (257)
T COG2099          69 LLIDATHP----------------YAARISQNAARAAKETGIP   95 (257)
T ss_pred             EEEECCCh----------------HHHHHHHHHHHHHHHhCCc
Confidence            99954321                1367889999999999997

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.98  E-value=0.024  Score=51.41  Aligned_cols=66  Identities=12%  Similarity=0.022  Sum_probs=44.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|.|+| .|.+|..++..|.+.|++         |+++++++.........+.  +.....+   . +.+.++|+||-+
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~---------V~~~d~~~~~~~~a~~~g~--~~~~~~~---~-~~~~~aDlVila   64 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHT---------VYGVSRRESTCERAIERGL--VDEASTD---L-SLLKDCDLVILA   64 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHCCC--cccccCC---H-hHhcCCCEEEEc
Confidence            4799999 799999999999999999         9999987543222211111  1101111   1 235789999977


Q ss_pred             cc
Q 044498          104 AA  105 (366)
Q Consensus       104 a~  105 (366)
                      ..
T Consensus        65 vp   66 (279)
T PRK07417         65 LP   66 (279)
T ss_pred             CC
Confidence            66

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.97  E-value=0.0072  Score=54.80  Aligned_cols=73  Identities=14%  Similarity=0.034  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      .+++++|+|+ |.+|++++..|.+.| .+         |++++|+..+...... .. ......+ +. .....+.++|+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~---------V~v~~R~~~~a~~l~~~~~-~~~~~~~-~~-~~~~~~~~~Di  188 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAE---------ITIVNRTVERAEELAKLFG-ALGKAEL-DL-ELQEELADFDL  188 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCE---------EEEEeCCHHHHHHHHHHhh-hccceee-cc-cchhccccCCE
Confidence            5678999996 999999999999999 67         9999998654322111 00 0000111 11 22345678999


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      ||++....
T Consensus       189 vInaTp~g  196 (278)
T PRK00258        189 IINATSAG  196 (278)
T ss_pred             EEECCcCC
Confidence            99998754

>PRK10537 voltage-gated potassium channel; Provisional

Probab=95.96  E-value=0.083  Score=50.21  Aligned_cols=72  Identities=11%  Similarity=-0.106  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      .+.+++|+| .|-+|+.++++|.++|.+         |.+++.+....  ....++.++.+|.+|++.++++ +++++.|
T Consensus       239 ~k~HvII~G-~g~lg~~v~~~L~~~g~~---------vvVId~d~~~~--~~~~g~~vI~GD~td~e~L~~AgI~~A~aV  306 (393)
T PRK10537        239 RKDHFIICG-HSPLAINTYLGLRQRGQA---------VTVIVPLGLEH--RLPDDADLIPGDSSDSAVLKKAGAARARAI  306 (393)
T ss_pred             cCCeEEEEC-CChHHHHHHHHHHHCCCC---------EEEEECchhhh--hccCCCcEEEeCCCCHHHHHhcCcccCCEE
Confidence            345799998 589999999999999998         88887553222  2223568999999999988876 5789999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-+..
T Consensus       307 I~~t~  311 (393)
T PRK10537        307 LALRD  311 (393)
T ss_pred             EEcCC
Confidence            85443

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.96  E-value=0.02  Score=51.78  Aligned_cols=55  Identities=9%  Similarity=0.063  Sum_probs=45.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ..+++|+|+|++|.+|+.++..|+++|.+         |+++.+.                     ...+...++++|+|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gat---------Vtv~~~~---------------------t~~L~~~~~~aDIv  206 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANAT---------VTICHSR---------------------TQNLPELVKQADII  206 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCE---------EEEEeCC---------------------chhHHHHhccCCEE
Confidence            37789999999999999999999999988         9888652                     12355556899999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |++.|
T Consensus       207 I~AtG  211 (283)
T PRK14192        207 VGAVG  211 (283)
T ss_pred             EEccC
Confidence            99997

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.95  E-value=0.059  Score=50.65  Aligned_cols=57  Identities=16%  Similarity=0.107  Sum_probs=42.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ..++|+|+|.+|.||..+++.|.+. +++         |+++++....               .   ......+.++|+|
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~---------V~g~D~~d~~---------------~---~~~~~~v~~aDlV   55 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLE---------VIGHDPADPG---------------S---LDPATLLQRADVL   55 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCE---------EEEEcCCccc---------------c---CCHHHHhcCCCEE
Confidence            4578999999999999999999975 777         9999874110               1   1233456789999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-|..
T Consensus        56 ilavP   60 (370)
T PRK08818         56 IFSAP   60 (370)
T ss_pred             EEeCC
Confidence            97776

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.95  E-value=0.052  Score=49.53  Aligned_cols=97  Identities=9%  Similarity=0.060  Sum_probs=58.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe-CCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD-WNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~-r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ++|.| ||||-+|+.+++-|.++++..    .++++.... ++..+.......  ++..-++++.     .++++|+++.
T Consensus         4 ~~iAi-GATg~VG~~~l~~Leer~fpv----~~l~l~~s~~~s~gk~i~f~g~--~~~V~~l~~~-----~f~~vDia~f   71 (322)
T PRK06901          4 LNIAI-AAEFELSEKLLEALEQSDLEI----EQISIVEIEPFGEEQGIRFNNK--AVEQIAPEEV-----EWADFNYVFF   71 (322)
T ss_pred             ceEEE-ecCcHHHHHHHHHHHhcCCch----hheeecccccccCCCEEEECCE--EEEEEECCcc-----CcccCCEEEE
Confidence            57999 999999999999888887651    111122332 333322222221  3333333332     2578999998


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                       ++                   -.........+.+.|+   .+|=-||.+-+.
T Consensus        72 -ag-------------------~~~s~~~ap~a~~aG~---~VIDnSsa~Rmd  101 (322)
T PRK06901         72 -AG-------------------KMAQAEHLAQAAEAGC---IVIDLYGICAAL  101 (322)
T ss_pred             -cC-------------------HHHHHHHHHHHHHCCC---EEEECChHhhCC
Confidence             77                   2345567777778886   477777765443

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.94  E-value=0.055  Score=49.90  Aligned_cols=73  Identities=10%  Similarity=0.043  Sum_probs=56.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ...+|+|+|+ |-+|...++.+...|.+         |++++++..+.......+...+...- +.+.+...-+.+|.+|
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~---------Via~~~~~~K~e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii  234 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAE---------VIAITRSEEKLELAKKLGADHVINSS-DSDALEAVKEIADAII  234 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCe---------EEEEeCChHHHHHHHHhCCcEEEEcC-CchhhHHhHhhCcEEE
Confidence            4678999997 59999999988889999         99999998876555555556555444 6665555544599999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      .+++
T Consensus       235 ~tv~  238 (339)
T COG1064         235 DTVG  238 (339)
T ss_pred             ECCC
Confidence            9988

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.94  E-value=0.033  Score=51.60  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ||+|.|+|+ |.+|..++..|.+.|++         |.+++|++.
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~---------V~~~~r~~~   35 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHD---------VTLWARDPE   35 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEECCHH
Confidence            578999995 99999999999999999         999998754

>PLN02494 adenosylhomocysteinase

Probab=95.92  E-value=0.016  Score=55.64  Aligned_cols=76  Identities=13%  Similarity=0.009  Sum_probs=52.7

Q ss_pred             ccccCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH
Q 044498           12 KLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        12 ~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~   91 (366)
                      .+-+....+..+++|+|+| .|.||+.+++.+...|.+         |+++++++.+.......++.++     +   +.
T Consensus       243 ~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~---------VIV~e~dp~r~~eA~~~G~~vv-----~---le  304 (477)
T PLN02494        243 GLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGAR---------VIVTEIDPICALQALMEGYQVL-----T---LE  304 (477)
T ss_pred             HHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCE---------EEEEeCCchhhHHHHhcCCeec-----c---HH
Confidence            3333333345678999999 599999999999999999         9999887654333322233322     1   34


Q ss_pred             hhhcCCCEEEEccc
Q 044498           92 RMTSGVDNMSNLAA  105 (366)
Q Consensus        92 ~~~~~~d~vi~~a~  105 (366)
                      ++++..|+||.+.+
T Consensus       305 Eal~~ADVVI~tTG  318 (477)
T PLN02494        305 DVVSEADIFVTTTG  318 (477)
T ss_pred             HHHhhCCEEEECCC
Confidence            56678999998666

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.89  E-value=0.0093  Score=50.20  Aligned_cols=68  Identities=22%  Similarity=0.127  Sum_probs=47.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|.|+| .|-||+.+++.|...|.+         |++++|...........  .+      ....+.++++.+|+|+
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~---------V~~~d~~~~~~~~~~~~--~~------~~~~l~ell~~aDiv~   96 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMR---------VIGYDRSPKPEEGADEF--GV------EYVSLDELLAQADIVS   96 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-E---------EEEEESSCHHHHHHHHT--TE------EESSHHHHHHH-SEEE
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCce---------eEEecccCChhhhcccc--cc------eeeehhhhcchhhhhh
Confidence            678999999 699999999999999999         99999987654311111  11      1224666777899998


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      .+....
T Consensus        97 ~~~plt  102 (178)
T PF02826_consen   97 LHLPLT  102 (178)
T ss_dssp             E-SSSS
T ss_pred             hhhccc
Confidence            887743

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.88  E-value=0.1  Score=44.78  Aligned_cols=34  Identities=24%  Similarity=0.337  Sum_probs=28.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWN   65 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~   65 (366)
                      +..+|+|.|+ |.+|+.++..|...|. +         |+++|..
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~---------i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGK---------LILVDFD   54 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCE---------EEEECCC
Confidence            4578999996 8899999999999997 5         7777755

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.87  E-value=0.036  Score=51.65  Aligned_cols=72  Identities=8%  Similarity=0.031  Sum_probs=47.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCCh---hHHHhhh-cCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVM---DNCLRMT-SGV   97 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~---~~l~~~~-~~~   97 (366)
                      .+|||+||+|-+|..+++.+...|. +         |++++++..+..... ..++..+. |..+.   +.+.++. .++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~---------Vi~~~~s~~~~~~~~~~lGa~~vi-~~~~~~~~~~i~~~~~~gv  225 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSR---------VVGICGSDEKCQLLKSELGFDAAI-NYKTDNVAERLRELCPEGV  225 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCE---------EEEEcCCHHHHHHHHHhcCCcEEE-ECCCCCHHHHHHHHCCCCc
Confidence            6899999999999999988888897 7         988887655432221 13333322 22221   2233322 369


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+|+++.+
T Consensus       226 d~vid~~g  233 (345)
T cd08293         226 DVYFDNVG  233 (345)
T ss_pred             eEEEECCC
Confidence            99999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=95.83  E-value=0.13  Score=46.18  Aligned_cols=26  Identities=19%  Similarity=0.372  Sum_probs=22.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHY   49 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~   49 (366)
                      ||||.|+|. |.||+.+++.|.+. +.+
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~   27 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLR   27 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCce
Confidence            579999997 99999999998875 455

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.83  E-value=0.069  Score=41.74  Aligned_cols=25  Identities=16%  Similarity=0.445  Sum_probs=22.4

Q ss_pred             eEEEEcCCCchhHHHHHHHHHc-CCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSE-RHY   49 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~-g~~   49 (366)
                      ||.|+|++|.+|..++..|.+. +++
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~   26 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFE   26 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCce
Confidence            5899999999999999999984 777

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=95.80  E-value=0.1  Score=50.13  Aligned_cols=105  Identities=11%  Similarity=0.017  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------------------ccc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------------------EDM--   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------------------~~~--   74 (366)
                      ...+|+|+|++| +|..+++-|...|...        +++++...-....                         ..+  
T Consensus        19 ~~s~VlliG~gg-lGsEilKNLvL~GIg~--------~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~   89 (425)
T cd01493          19 ESAHVCLLNATA-TGTEILKNLVLPGIGS--------FTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPD   89 (425)
T ss_pred             hhCeEEEEcCcH-HHHHHHHHHHHcCCCe--------EEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCC
Confidence            346899999655 9999999999999641        7777644221100                         011  


Q ss_pred             ccceEEEccCCCh-hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498           75 FCHEFHLVDLRVM-DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        75 ~~v~~~~~D~~~~-~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      ..++++.-++.+. +.....+.++|+||.+..                  +......|.+.|.+.+++   +|+++|.+.
T Consensus        90 V~i~~~~e~~~~ll~~~~~f~~~fdiVI~t~~------------------~~~~~~~L~~~c~~~~iP---lI~~~s~G~  148 (425)
T cd01493          90 VNGSAVEESPEALLDNDPSFFSQFTVVIATNL------------------PESTLLRLADVLWSANIP---LLYVRSYGL  148 (425)
T ss_pred             CEEEEEecccchhhhhHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEecccC
Confidence            1223333333221 112345567777773221                  123334577888889885   999999888


Q ss_pred             cCC
Q 044498          154 YPE  156 (366)
Q Consensus       154 yg~  156 (366)
                      ||.
T Consensus       149 ~G~  151 (425)
T cd01493         149 YGY  151 (425)
T ss_pred             EEE
Confidence            874

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.80  E-value=0.02  Score=54.52  Aligned_cols=68  Identities=12%  Similarity=0.014  Sum_probs=50.5

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ...+++|+|+|+ |.||..+++.+...|.+         |+++++++.+.......++..+.        +.+++.++|+
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~---------ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v~~aDV  260 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGAR---------VIVTEVDPICALQAAMEGYEVMT--------MEEAVKEGDI  260 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEECChhhHHHHHhcCCEEcc--------HHHHHcCCCE
Confidence            346789999995 99999999999999999         99998876654443334443321        1245578999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||.++|
T Consensus       261 VI~atG  266 (413)
T cd00401         261 FVTTTG  266 (413)
T ss_pred             EEECCC
Confidence            998877

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.79  E-value=0.041  Score=52.28  Aligned_cols=68  Identities=12%  Similarity=0.028  Sum_probs=49.2

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      +..+++|+|+| .|.||+.+++.+...|.+         |+++++++.+.......++.++     +   +.++++++|+
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~---------ViV~d~dp~r~~~A~~~G~~v~-----~---leeal~~aDV  253 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGMGAR---------VIVTEVDPIRALEAAMDGFRVM-----T---MEEAAKIGDI  253 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhCcCE---------EEEEeCChhhHHHHHhcCCEeC-----C---HHHHHhcCCE
Confidence            34678999999 599999999999999999         9999887755433333333222     1   2335678999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||.+.|
T Consensus       254 VItaTG  259 (406)
T TIGR00936       254 FITATG  259 (406)
T ss_pred             EEECCC
Confidence            997766

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.79  E-value=0.24  Score=48.69  Aligned_cols=151  Identities=14%  Similarity=0.087  Sum_probs=90.7

Q ss_pred             CCCeEEEEcCC-CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc-cc----------ccccccceEEEccCCChhH
Q 044498           22 GKLRISSIGVG-GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE-HM----------MEDMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGat-G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-~~----------~~~~~~v~~~~~D~~~~~~   89 (366)
                      ..+-.|||||+ |-||..++..|+..|.+         |++.+.+-.+ ..          .......-++..+..++.+
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAt---------VI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysD  465 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGAT---------VIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSD  465 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcE---------EEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhh
Confidence            56779999975 89999999999999999         8877643221 10          0111223456666666655


Q ss_pred             HHhhhc---------------------CCCEEEEcccccCCccccccCc--chhhhhhHHHHHHHHHHHHHcCCC-----
Q 044498           90 CLRMTS---------------------GVDNMSNLAADMGGMGFIQSNH--SVIMYKNTTISFDMLEAARMNGVM-----  141 (366)
Q Consensus        90 l~~~~~---------------------~~d~vi~~a~~~~~~~~~~~~~--~~~~~~nv~~~~~ll~a~~~~~~~-----  141 (366)
                      +..+++                     .++.+|-+|++.-.......++  +..+++=+....+++-..+..+..     
T Consensus       466 VdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~  545 (866)
T COG4982         466 VDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDT  545 (866)
T ss_pred             HHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCccc
Confidence            555431                     3678888888653222222222  222444455566666666554322     


Q ss_pred             ceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC
Q 044498          142 SLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE  197 (366)
Q Consensus       142 ~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~  197 (366)
                      -+++|.-.|..      ..          ..-....|+.+|+..+.++..++.+.+
T Consensus       546 R~hVVLPgSPN------rG----------~FGgDGaYgEsK~aldav~~RW~sEs~  585 (866)
T COG4982         546 RLHVVLPGSPN------RG----------MFGGDGAYGESKLALDAVVNRWHSESS  585 (866)
T ss_pred             ceEEEecCCCC------CC----------ccCCCcchhhHHHHHHHHHHHhhccch
Confidence            02466655520      00          123356799999999999988877653

>PRK14852 hypothetical protein; Provisional

Probab=95.77  E-value=0.11  Score=54.36  Aligned_cols=105  Identities=10%  Similarity=-0.017  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-------------------------cc--ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-------------------------MM--EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-------------------------~~--~~~   74 (366)
                      ...+|+|+| .|.+|+.++..|...|...        ++++|...-..                         ..  ...
T Consensus       331 ~~srVlVvG-lGGlGs~ia~~LAraGVG~--------I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~  401 (989)
T PRK14852        331 LRSRVAIAG-LGGVGGIHLMTLARTGIGN--------FNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPF  401 (989)
T ss_pred             hcCcEEEEC-CcHHHHHHHHHHHHcCCCe--------EEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCC
Confidence            457899999 5899999999999998641        55554321100                         00  012


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...+ +.+.+.++++++|+||.+.-..                .+.....+.+.|.+.+++   +|+.++.+.+
T Consensus       402 v~I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~----------------~~~~rr~l~~~c~~~~IP---~I~ag~~G~~  461 (989)
T PRK14852        402 LDIRSFPEGV-AAETIDAFLKDVDLLVDGIDFF----------------ALDIRRRLFNRALELGIP---VITAGPLGYS  461 (989)
T ss_pred             CeEEEEecCC-CHHHHHHHhhCCCEEEECCCCc----------------cHHHHHHHHHHHHHcCCC---EEEeeccccC
Confidence            2344554455 4466778889999999665421                133345677788888986   8887764444


Q ss_pred             C
Q 044498          155 P  155 (366)
Q Consensus       155 g  155 (366)
                      |
T Consensus       462 g  462 (989)
T PRK14852        462 C  462 (989)
T ss_pred             e
Confidence            3

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.76  E-value=0.045  Score=48.70  Aligned_cols=97  Identities=15%  Similarity=0.189  Sum_probs=59.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh----hcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM----TSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~----~~~~   97 (366)
                      ...+|||+|++| +|..+++.+...|.+         |++++++..........+... ..|..+......+    -.++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~---------v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~  202 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGAR---------VIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGA  202 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCe---------EEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCC
Confidence            457899999999 999999988889988         999987654322221112111 1233332222221    2469


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      |+++++++..                  .....+++.++..+    +++.++..
T Consensus       203 d~vi~~~~~~------------------~~~~~~~~~l~~~G----~~v~~~~~  234 (271)
T cd05188         203 DVVIDAVGGP------------------ETLAQALRLLRPGG----RIVVVGGT  234 (271)
T ss_pred             CEEEECCCCH------------------HHHHHHHHhcccCC----EEEEEccC
Confidence            9999988721                  22334555554443    78887764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.76  E-value=0.049  Score=53.32  Aligned_cols=103  Identities=15%  Similarity=0.078  Sum_probs=68.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh-------------h
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM-------------D   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~-------------~   88 (366)
                      ...+|+|+|+ |-+|...+..+...|.+         |+++++++.+.......+.+++..|..+.             +
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~---------V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAI---------VRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchh
Confidence            4678999995 99999999999999999         99999987765555556667665544321             1


Q ss_pred             -------HHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           89 -------NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        89 -------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                             .+.+..+++|+||.+++..+.     ..+       ...+...++.++..+    .+|.++.
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~-----~aP-------~lit~~~v~~mkpGg----vIVdvg~  286 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGK-----PAP-------KLITAEMVASMKPGS----VIVDLAA  286 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCcc-----cCc-------chHHHHHHHhcCCCC----EEEEEcc
Confidence                   112223579999999995431     011       111345666665433    5777765

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.75  E-value=0.024  Score=51.55  Aligned_cols=39  Identities=13%  Similarity=0.175  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      +..+.+|.|+|+ |.+|..++..|+..|++         |+++++++..
T Consensus         2 ~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~---------V~l~d~~~~~   40 (286)
T PRK07819          2 SDAIQRVGVVGA-GQMGAGIAEVCARAGVD---------VLVFETTEEL   40 (286)
T ss_pred             CCCccEEEEEcc-cHHHHHHHHHHHhCCCE---------EEEEECCHHH
Confidence            335568999996 99999999999999999         9999987654

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.75  E-value=0.03  Score=52.30  Aligned_cols=75  Identities=11%  Similarity=0.090  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc----CC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS----GV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~----~~   97 (366)
                      .+++|||.||+|-+|++.++-+...|...        |++.+....... ....+ .-...|+.+++-.+...+    ++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~--------v~t~~s~e~~~l-~k~lG-Ad~vvdy~~~~~~e~~kk~~~~~~  226 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIK--------VVTACSKEKLEL-VKKLG-ADEVVDYKDENVVELIKKYTGKGV  226 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcE--------EEEEcccchHHH-HHHcC-CcEeecCCCHHHHHHHHhhcCCCc
Confidence            56789999999999999999888888330        555444333222 22222 223356667554444443    69


Q ss_pred             CEEEEcccc
Q 044498           98 DNMSNLAAD  106 (366)
Q Consensus        98 d~vi~~a~~  106 (366)
                      |+|++|++.
T Consensus       227 DvVlD~vg~  235 (347)
T KOG1198|consen  227 DVVLDCVGG  235 (347)
T ss_pred             cEEEECCCC
Confidence            999999994

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.75  E-value=0.041  Score=50.34  Aligned_cols=74  Identities=16%  Similarity=0.119  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~--~~   96 (366)
                      ...+|+|+|++|.+|..+++.+...|.+         |+++++...........++..+ .|..+.+   .+.+..  ++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~---------v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~  213 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGAR---------VIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQG  213 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCc
Confidence            4578999999999999999999999998         9988876543222222222222 2333332   233333  36


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|.++++++
T Consensus       214 ~d~vi~~~~  222 (325)
T cd08253         214 VDVIIEVLA  222 (325)
T ss_pred             eEEEEECCc
Confidence            999999887

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.74  E-value=0.11  Score=49.83  Aligned_cols=101  Identities=9%  Similarity=-0.019  Sum_probs=63.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCC------CCCCCCCccEEEEEeCCCcccccc--------------------------
Q 044498           25 RISSIGVGGFIPSNIARRLKSERH------YSTSIPNALYIIASDWNKNEHMME--------------------------   72 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~------~~~~~~~~~~V~~~~r~~~~~~~~--------------------------   72 (366)
                      +|||+| .|.||..+++.|...|.      .         ++++|...-+....                          
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~---------I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~l   70 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGE---------ITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAM   70 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCe---------EEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHH
Confidence            589999 59999999999999987      3         77776432211000                          


Q ss_pred             -ccccceEEEccCCChhH--H-HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           73 -DMFCHEFHLVDLRVMDN--C-LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        73 -~~~~v~~~~~D~~~~~~--l-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                       ....++.+...+.....  + ...++++|+||.+.-                  |+..-..+-+.|...+++   +|..
T Consensus        71 Np~v~I~a~~~~v~~~~~~~~~~~f~~~~DvVi~alD------------------n~~aR~~vn~~C~~~~iP---li~~  129 (435)
T cd01490          71 NPDLKITALQNRVGPETEHIFNDEFWEKLDGVANALD------------------NVDARMYVDRRCVYYRKP---LLES  129 (435)
T ss_pred             CCCCEEEEEecccChhhhhhhhHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHhCCC---EEEE
Confidence             11123334333332111  1 234567788885544                  466666788899988885   8888


Q ss_pred             ecccccCC
Q 044498          149 SSACIYPE  156 (366)
Q Consensus       149 SS~~vyg~  156 (366)
                      ++.+.+|.
T Consensus       130 gt~G~~G~  137 (435)
T cd01490         130 GTLGTKGN  137 (435)
T ss_pred             ecccceeE
Confidence            87665553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.72  E-value=0.068  Score=41.48  Aligned_cols=85  Identities=13%  Similarity=0.175  Sum_probs=52.9

Q ss_pred             CeEEEEcCC---CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           24 LRISSIGVG---GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        24 ~~vlItGat---G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++|.|+|++   +..|..+++.|.+.|++         |+.++-....-            ..+.-...+.+.-..+|.+
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~---------v~~Vnp~~~~i------------~G~~~y~sl~e~p~~iDla   59 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYE---------VYPVNPKGGEI------------LGIKCYPSLAEIPEPIDLA   59 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-E---------EEEESTTCSEE------------TTEE-BSSGGGCSST-SEE
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCE---------EEEECCCceEE------------CcEEeeccccCCCCCCCEE
Confidence            479999998   77999999999999999         99885433110            0111122333323578988


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +.+..                   ...+..+++.+.+.+++  .+++.++
T Consensus        60 vv~~~-------------------~~~~~~~v~~~~~~g~~--~v~~~~g   88 (116)
T PF13380_consen   60 VVCVP-------------------PDKVPEIVDEAAALGVK--AVWLQPG   88 (116)
T ss_dssp             EE-S--------------------HHHHHHHHHHHHHHT-S--EEEE-TT
T ss_pred             EEEcC-------------------HHHHHHHHHHHHHcCCC--EEEEEcc
Confidence            87766                   45567788888888998  8888776

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=95.71  E-value=0.034  Score=51.87  Aligned_cols=97  Identities=11%  Similarity=0.092  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccc--cccccceE----------E-EccCCChh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEF----------H-LVDLRVMD   88 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~----------~-~~D~~~~~   88 (366)
                      |+||.|.|+ |.||+.+++.+.++ +.+         |.++.........  ....+...          + ..++.-..
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~e---------Lvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~   70 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDME---------LVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAG   70 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcE---------EEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcC
Confidence            579999998 99999999988864 456         7766543221110  00000010          0 00111112


Q ss_pred             HHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      .+..++.++|+||.|++.                   ......+..+.++|.   ++|+.++.
T Consensus        71 ~~~el~~~vDVVIdaT~~-------------------~~~~e~a~~~~~aGk---~VI~~~~~  111 (341)
T PRK04207         71 TIEDLLEKADIVVDATPG-------------------GVGAKNKELYEKAGV---KAIFQGGE  111 (341)
T ss_pred             ChhHhhccCCEEEECCCc-------------------hhhHHHHHHHHHCCC---EEEEcCCC
Confidence            234455689999999873                   234456677777884   68877764

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.70  E-value=0.065  Score=49.36  Aligned_cols=66  Identities=14%  Similarity=0.132  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|.|+| .|.||+.+++.|...|++         |+++++......     ++..+    ....++.++++++|+|+
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~---------V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv  195 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFP---------LRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLI  195 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCE---------EEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEE
Confidence            568999999 799999999999999999         999987543211     11111    12456888899999999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+...
T Consensus       196 ~~lPl  200 (312)
T PRK15469        196 NLLPN  200 (312)
T ss_pred             ECCCC
Confidence            88774

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.70  E-value=0.064  Score=49.56  Aligned_cols=98  Identities=8%  Similarity=0.038  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh-cCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT-SGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~-~~~   97 (366)
                      .+.+|+|.|++|-+|..+++.+...|.+         |+++++...........++..+ .+..+.+   .+.... +++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~---------v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~v  208 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCH---------VIGTCSSDEKAEFLKSLGCDRP-INYKTEDLGEVLKKEYPKGV  208 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCe---------EEEEeCcHHHHHHHHHcCCceE-EeCCCccHHHHHHHhcCCCC
Confidence            4578999999999999999988888998         9988876543322222222222 1222221   222221 368


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      |.++++.+.                   ......++.+...+    +||.+++..
T Consensus       209 d~v~~~~g~-------------------~~~~~~~~~l~~~g----~~v~~g~~~  240 (329)
T cd08250         209 DVVYESVGG-------------------EMFDTCVDNLALKG----RLIVIGFIS  240 (329)
T ss_pred             eEEEECCcH-------------------HHHHHHHHHhccCC----eEEEEeccc
Confidence            999998771                   22334455554444    789887753

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.66  E-value=0.054  Score=46.40  Aligned_cols=91  Identities=11%  Similarity=0.107  Sum_probs=56.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |+|.|+| +|.||..+++.+...  +.+     .   +.+.+|+..+......   .+-..+.+   .+.+++.++|.++
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e-----~---v~v~D~~~ek~~~~~~---~~~~~~~s---~ide~~~~~DlvV   65 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFE-----L---VAVYDRDEEKAKELEA---SVGRRCVS---DIDELIAEVDLVV   65 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCccee-----E---EEEecCCHHHHHHHHh---hcCCCccc---cHHHHhhccceee
Confidence            4799999 699999999866543  233     1   6677777665443221   11122223   3445557888898


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      -||+                   .++...+..-+.++|+.   +|.+|..
T Consensus        66 EaAS-------------------~~Av~e~~~~~L~~g~d---~iV~SVG   93 (255)
T COG1712          66 EAAS-------------------PEAVREYVPKILKAGID---VIVMSVG   93 (255)
T ss_pred             eeCC-------------------HHHHHHHhHHHHhcCCC---EEEEech
Confidence            8888                   45556666666667764   6666654

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=95.65  E-value=0.083  Score=46.88  Aligned_cols=93  Identities=17%  Similarity=0.188  Sum_probs=64.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      |+|||+|||+ =|+.|++.|.++|+-        .+.+.+.-.............+..+-+.+.+.+.+.++  +++.||
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~v--------~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vI   71 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGYV--------IVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVI   71 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCCE--------EEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            6899999976 599999999999851        02333222222121222334778888878898998885  799999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ...=..                -...+.++.++|++.+++
T Consensus        72 DATHPf----------------A~~is~na~~a~~~~~ip   95 (249)
T PF02571_consen   72 DATHPF----------------AAEISQNAIEACRELGIP   95 (249)
T ss_pred             ECCCch----------------HHHHHHHHHHHHhhcCcc
Confidence            653321                266788999999999997

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.64  E-value=0.057  Score=50.65  Aligned_cols=74  Identities=9%  Similarity=0.082  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCC---h-hHHHhhh-c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRV---M-DNCLRMT-S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~---~-~~l~~~~-~   95 (366)
                      ...+|||+||+|-+|..+++.+...|.+         |++++++..+..... ..++..+. |..+   . +.+.+.. .
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~---------Vi~~~~~~~k~~~~~~~lGa~~vi-~~~~~~~~~~~i~~~~~~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCY---------VVGSAGSSQKVDLLKNKLGFDEAF-NYKEEPDLDAALKRYFPE  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE---------EEEEcCCHHHHHHHHHhcCCCEEE-ECCCcccHHHHHHHHCCC
Confidence            4578999999999999999888888998         998877654433221 23333322 2221   1 2222222 2


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+++.+.|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            6899999887

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.61  E-value=0.04  Score=49.68  Aligned_cols=56  Identities=7%  Similarity=0.045  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|+|+|.++.+|+.++..|.++|.+         |+++.+..                     ..+.+.++++|+||
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~gat---------Vtv~~s~t---------------------~~l~~~~~~ADIVI  206 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKNAS---------VTILHSRS---------------------KDMASYLKDADVIV  206 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCe---------EEEEeCCc---------------------hhHHHHHhhCCEEE
Confidence            6789999999999999999999999999         98886531                     23666778999999


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      ..+|..
T Consensus       207 sAvg~p  212 (286)
T PRK14175        207 SAVGKP  212 (286)
T ss_pred             ECCCCC
Confidence            888853

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.60  E-value=0.071  Score=48.46  Aligned_cols=96  Identities=15%  Similarity=0.122  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEe-CCCcccc--ccccccceEEEccCCChhHHHhh--hc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASD-WNKNEHM--MEDMFCHEFHLVDLRVMDNCLRM--TS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~-r~~~~~~--~~~~~~v~~~~~D~~~~~~l~~~--~~   95 (366)
                      +++||.|+| +|.||..++..+.+. +.+         +.++. +++....  .....++...   ..+.+.+.+.  +.
T Consensus         3 ~klrVAIIG-tG~IGt~hm~~l~~~~~ve---------lvAVvdid~es~gla~A~~~Gi~~~---~~~ie~LL~~~~~~   69 (302)
T PRK08300          3 SKLKVAIIG-SGNIGTDLMIKILRSEHLE---------PGAMVGIDPESDGLARARRLGVATS---AEGIDGLLAMPEFD   69 (302)
T ss_pred             CCCeEEEEc-CcHHHHHHHHHHhcCCCcE---------EEEEEeCChhhHHHHHHHHcCCCcc---cCCHHHHHhCcCCC
Confidence            567999999 999999988888864 455         66544 4433211  1122222222   2344444432  35


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      ++|+|+.+++                   ..........+.+.|+   ++|-.++.+
T Consensus        70 dIDiVf~AT~-------------------a~~H~e~a~~a~eaGk---~VID~sPA~  104 (302)
T PRK08300         70 DIDIVFDATS-------------------AGAHVRHAAKLREAGI---RAIDLTPAA  104 (302)
T ss_pred             CCCEEEECCC-------------------HHHHHHHHHHHHHcCC---eEEECCccc
Confidence            7999998887                   2344566777777886   577666655

>PRK06444 prephenate dehydrogenase; Provisional

Probab=95.58  E-value=0.045  Score=46.70  Aligned_cols=26  Identities=15%  Similarity=0.079  Sum_probs=24.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHY   49 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~   49 (366)
                      |+|.|+||+|.+|+.+++.|.+.|+.
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~   26 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLG   26 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCE
Confidence            58999999999999999999999998

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.58  E-value=0.14  Score=44.01  Aligned_cols=86  Identities=14%  Similarity=0.044  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++++|+|+|| |-+|..-++.|++.|.+         |++++....+....  ...+++++..++...     .+.+++.
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~---------VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~-----dl~~~~l   72 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQ---------LRVIAEELESELTLLAEQGGITWLARCFDAD-----ILEGAFL   72 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCE---------EEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH-----HhCCcEE
Confidence            5679999996 99999999999999999         99998654422211  112567777776632     2567888


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV  140 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~  140 (366)
                      ||-+.+.                  -.-...+...|+..++
T Consensus        73 Vi~at~d------------------~~ln~~i~~~a~~~~i   95 (205)
T TIGR01470        73 VIAATDD------------------EELNRRVAHAARARGV   95 (205)
T ss_pred             EEECCCC------------------HHHHHHHHHHHHHcCC
Confidence            8844441                  1123457777777664

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.58  E-value=0.046  Score=52.89  Aligned_cols=72  Identities=14%  Similarity=-0.093  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC----------------CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC
Q 044498           22 GKLRISSIGV----------------GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~   85 (366)
                      ++++||||+|                ||..|.+|++.+..+|++         |+.+.....-.   ...+++++.+  .
T Consensus       255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~---------VtlI~Gp~~~~---~p~~v~~i~V--~  320 (475)
T PRK13982        255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE---------VTLISGPVDLA---DPQGVKVIHV--E  320 (475)
T ss_pred             CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc---------EEEEeCCcCCC---CCCCceEEEe--c
Confidence            7889999975                799999999999999999         99887543211   2234565544  3


Q ss_pred             ChhHHHhhhc---CCCEEEEccccc
Q 044498           86 VMDNCLRMTS---GVDNMSNLAADM  107 (366)
Q Consensus        86 ~~~~l~~~~~---~~d~vi~~a~~~  107 (366)
                      ..+++.+++.   ..|++|++|+..
T Consensus       321 ta~eM~~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        321 SARQMLAAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             CHHHHHHHHHhhCCCCEEEEecccc
Confidence            4444444432   379999999965

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.56  E-value=0.049  Score=48.96  Aligned_cols=66  Identities=21%  Similarity=0.144  Sum_probs=40.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEE-EEeCCCccccccc-cccceEEEccCCChhHHHhhhcCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYII-ASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~-~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ||||.|+| .|.||+.+++.|.+.+  .+         +. +++++..+..... ..++.       -..++.+++.++|
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~e---------lv~v~d~~~~~a~~~a~~~~~~-------~~~~~~ell~~~D   63 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAE---------LYAFYDRNLEKAENLASKTGAK-------ACLSIDELVEDVD   63 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeE---------EEEEECCCHHHHHHHHHhcCCe-------eECCHHHHhcCCC
Confidence            47999999 5999999999998753  44         44 4555543222111 11111       1123444457899


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +|+.|+.
T Consensus        64 vVvi~a~   70 (265)
T PRK13304         64 LVVECAS   70 (265)
T ss_pred             EEEEcCC
Confidence            9999976

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.53  E-value=0.07  Score=50.08  Aligned_cols=72  Identities=10%  Similarity=0.065  Sum_probs=46.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC---CccccccccccceEEEccCCChhHH-HhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN---KNEHMMEDMFCHEFHLVDLRVMDNC-LRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~---~~~~~~~~~~~v~~~~~D~~~~~~l-~~~~~~~   97 (366)
                      .+.+|+|+|+ |-+|...++.+...|.+         |+++++.   +.+.......++.++  |..+.+.. .....++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~---------vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~  239 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFE---------VYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEF  239 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCe---------EEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCC
Confidence            4568999985 99999999888888988         9999874   222222233445543  33222111 1123469


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||.++|
T Consensus       240 d~vid~~g  247 (355)
T cd08230         240 DLIIEATG  247 (355)
T ss_pred             CEEEECcC
Confidence            99999988

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.53  E-value=0.014  Score=47.84  Aligned_cols=75  Identities=16%  Similarity=0.135  Sum_probs=50.5

Q ss_pred             cCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh
Q 044498           15 RESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        15 ~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +....+...++++|+| -|.+|+.+++.|...|.+         |++....+-...+....+++...        +.+++
T Consensus        15 r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~---------V~V~e~DPi~alqA~~dGf~v~~--------~~~a~   76 (162)
T PF00670_consen   15 RATNLMLAGKRVVVIG-YGKVGKGIARALRGLGAR---------VTVTEIDPIRALQAAMDGFEVMT--------LEEAL   76 (162)
T ss_dssp             HHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-E---------EEEE-SSHHHHHHHHHTT-EEE---------HHHHT
T ss_pred             hcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCE---------EEEEECChHHHHHhhhcCcEecC--------HHHHH
Confidence            3344556788999999 599999999999999999         99999887766655555555432        55677


Q ss_pred             cCCCEEEEccccc
Q 044498           95 SGVDNMSNLAADM  107 (366)
Q Consensus        95 ~~~d~vi~~a~~~  107 (366)
                      ...|++|-+.|..
T Consensus        77 ~~adi~vtaTG~~   89 (162)
T PF00670_consen   77 RDADIFVTATGNK   89 (162)
T ss_dssp             TT-SEEEE-SSSS
T ss_pred             hhCCEEEECCCCc
Confidence            8899999888843

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=95.53  E-value=0.094  Score=47.97  Aligned_cols=73  Identities=14%  Similarity=0.125  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEE-----ccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHL-----VDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~-----~D~~~~~~l~~~~~   95 (366)
                      +|+|.|+|+ |--|.+|+..|.++||+         |+...|++......  .+.+..+..     ..+.-..++..+++
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~---------V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~   70 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHE---------VRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALD   70 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCe---------eEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHh
Confidence            478999995 89999999999999999         99999875421111  111112222     22333456788888


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+|+....
T Consensus        71 ~ad~iv~avP   80 (329)
T COG0240          71 GADIIVIAVP   80 (329)
T ss_pred             cCCEEEEECC
Confidence            9999995544

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.52  E-value=0.021  Score=52.20  Aligned_cols=66  Identities=12%  Similarity=0.130  Sum_probs=46.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      +|+|.|+| .|.+|+.+++.|.+.|++         |.+++|++.........++..       .....++++++|+||-
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~---------v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~   64 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYS---------LVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIIT   64 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCe---------EEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEE
Confidence            46899999 699999999999999999         999988765432222112111       1223445678999997


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        65 ~vp   67 (296)
T PRK11559         65 MLP   67 (296)
T ss_pred             eCC
Confidence            765

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.51  E-value=0.085  Score=48.63  Aligned_cols=96  Identities=8%  Similarity=-0.032  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC--hhHHHhhh-cCCCE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV--MDNCLRMT-SGVDN   99 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~--~~~l~~~~-~~~d~   99 (366)
                      ..+|+|.|++|.+|..+++.+...|.+         |+++++...+.......++..+ .|..+  .+.+.+.. .++|+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~---------v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~d~  216 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYE---------VVASTGKADAADYLKKLGAKEV-IPREELQEESIKPLEKQRWAG  216 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCe---------EEEEecCHHHHHHHHHcCCCEE-EcchhHHHHHHHhhccCCcCE
Confidence            468999999999999999988889998         9988877654333333333322 22222  22233322 35899


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      |+++.+.                   ......++.++..|    ++|.++..
T Consensus       217 vld~~g~-------------------~~~~~~~~~l~~~G----~~i~~g~~  245 (326)
T cd08289         217 AVDPVGG-------------------KTLAYLLSTLQYGG----SVAVSGLT  245 (326)
T ss_pred             EEECCcH-------------------HHHHHHHHHhhcCC----EEEEEeec
Confidence            9988772                   22334555555555    78887753

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.50  E-value=0.12  Score=46.72  Aligned_cols=100  Identities=14%  Similarity=0.051  Sum_probs=63.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------------------c--cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------------------E--DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------------------~--~~   74 (366)
                      +..+|||.|+ |-+|..+++.|...|...        |+++|...-....                         .  +.
T Consensus        18 ~~s~VLIvG~-gGLG~EiaKnLalaGVg~--------itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~   88 (286)
T cd01491          18 QKSNVLISGL-GGLGVEIAKNLILAGVKS--------VTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPY   88 (286)
T ss_pred             hcCcEEEEcC-CHHHHHHHHHHHHcCCCe--------EEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCC
Confidence            4568999995 889999999999999641        7777643221100                         0  11


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+...+     ..+.+.++|+||.+..                  |......+-++|+++++   .||...+.+.+
T Consensus        89 V~V~~~~~~~-----~~~~l~~fdvVV~~~~------------------~~~~~~~in~~c~~~~i---pfI~a~~~G~~  142 (286)
T cd01491          89 VPVTVSTGPL-----TTDELLKFQVVVLTDA------------------SLEDQLKINEFCHSPGI---KFISADTRGLF  142 (286)
T ss_pred             CEEEEEeccC-----CHHHHhcCCEEEEecC------------------CHHHHHHHHHHHHHcCC---EEEEEeccccE
Confidence            1222333221     1234567888886543                  24455567788998888   49998887776


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       143 G~  144 (286)
T cd01491         143 GS  144 (286)
T ss_pred             EE
Confidence            64

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=95.48  E-value=0.46  Score=43.10  Aligned_cols=90  Identities=12%  Similarity=0.125  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEE-EeCCCccccccccccceEEEccCCChhHHHhhhcC--CC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA-SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG--VD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~-~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~--~d   98 (366)
                      .+.||+|.|.||.+|+.+.+.|...|.+         ++. +.-.... ..         ...+.-...+.++-+.  +|
T Consensus         5 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~---------~v~~V~p~~~~-~~---------v~G~~~y~sv~dlp~~~~~D   65 (286)
T TIGR01019         5 KDTKVIVQGITGSQGSFHTEQMLAYGTN---------IVGGVTPGKGG-TT---------VLGLPVFDSVKEAVEETGAN   65 (286)
T ss_pred             CCCcEEEecCCcHHHHHHHHHHHhCCCC---------EEEEECCCCCc-ce---------ecCeeccCCHHHHhhccCCC
Confidence            3468999999999999999999998876         444 4322101 00         0122223344444443  78


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      .++-+..                   ......+++.|.+.+++  .+|.+|+.
T Consensus        66 lavi~vp-------------------a~~v~~~l~e~~~~Gvk--~avIis~G   97 (286)
T TIGR01019        66 ASVIFVP-------------------APFAADAIFEAIDAGIE--LIVCITEG   97 (286)
T ss_pred             EEEEecC-------------------HHHHHHHHHHHHHCCCC--EEEEECCC
Confidence            8876655                   34455677777778888  77766663

ATP citrate lyases appear to form an outgroup.

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=95.48  E-value=0.032  Score=51.59  Aligned_cols=75  Identities=12%  Similarity=0.104  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChh-HHHhhhcCCCE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMD-NCLRMTSGVDN   99 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~-~l~~~~~~~d~   99 (366)
                      +++||+.| +||+.+.+++.|.+++ .+         |++-+|...+.... ....++.+..|+.+.+ .+++..+..|.
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~---------vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~   71 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVN---------VTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDL   71 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCce---------EEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccce
Confidence            57899999 6999999999999875 45         88888776554333 2244789999999998 89998999999


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      ++.+...+
T Consensus        72 viSLlP~t   79 (445)
T KOG0172|consen   72 VISLLPYT   79 (445)
T ss_pred             eeeeccch
Confidence            99887744

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.46  E-value=0.082  Score=48.38  Aligned_cols=101  Identities=17%  Similarity=0.073  Sum_probs=67.8

Q ss_pred             EEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----cc------ccceEEEccCCChhHHHhhhc
Q 044498           28 SIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----DM------FCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        28 ItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----~~------~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      |+|+ |.||+.++..|...+.  +         +..++.........    ..      ..+.+.   -.+.    ..++
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~e---------l~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~----~~~~   63 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADE---------IVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDY----SDCK   63 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCE---------EEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCH----HHHC
Confidence            4674 9999999999988763  4         88888755422111    00      111221   1222    3468


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ++|+||-.||...   ....+..+.+..|+...+.+.+.+.+++.+ ..+|.+|
T Consensus        64 daDivVitag~~r---k~g~~R~dll~~N~~i~~~~~~~i~~~~p~-~~vivvs  113 (299)
T TIGR01771        64 DADLVVITAGAPQ---KPGETRLELVGRNVRIMKSIVPEVVKSGFD-GIFLVAT  113 (299)
T ss_pred             CCCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeC
Confidence            8999999999642   234467788999999999999999998755 3455555

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.46  E-value=0.025  Score=48.55  Aligned_cols=66  Identities=17%  Similarity=0.196  Sum_probs=45.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhh-cCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMT-SGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~-~~~d~   99 (366)
                      .+|+|+|+|. |.+|+++++.|.+.|++         |++.+++........ ..+...+  +   .+   +++ .++|+
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~---------Vvv~D~~~~~~~~~~~~~g~~~v--~---~~---~l~~~~~Dv   88 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAK---------LIVADINEEAVARAAELFGATVV--A---PE---EIYSVDADV   88 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHcCCEEE--c---ch---hhccccCCE
Confidence            6789999996 89999999999999999         998887654322111 1122222  1   12   223 27999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ++.+|.
T Consensus        89 ~vp~A~   94 (200)
T cd01075          89 FAPCAL   94 (200)
T ss_pred             EEeccc
Confidence            998876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.46  E-value=0.075  Score=48.90  Aligned_cols=69  Identities=17%  Similarity=0.145  Sum_probs=45.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      +.++|.|+| .|.+|..++..|.+.|+  +         |++++|++.........++...   ..  ....+.++++|+
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~---------V~~~dr~~~~~~~a~~~g~~~~---~~--~~~~~~~~~aDv   69 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGE---------IVGADRSAETRARARELGLGDR---VT--TSAAEAVKGADL   69 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcE---------EEEEECCHHHHHHHHhCCCCce---ec--CCHHHHhcCCCE
Confidence            347899999 79999999999999884  6         8999887643222211111100   11  123345678999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||.++.
T Consensus        70 Viiavp   75 (307)
T PRK07502         70 VILCVP   75 (307)
T ss_pred             EEECCC
Confidence            998876

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.45  E-value=0.082  Score=46.81  Aligned_cols=71  Identities=20%  Similarity=0.164  Sum_probs=41.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      .++||.|+| +|.+|..++..|++.|...   ..  .|++.+|+.......  ...++...    .   +..++++++|+
T Consensus         3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~---~~--~i~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~Di   69 (245)
T PRK07634          3 KKHRILFIG-AGRMAEAIFSGLLKTSKEY---IE--EIIVSNRSNVEKLDQLQARYNVSTT----T---DWKQHVTSVDT   69 (245)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHhCCCCC---cC--eEEEECCCCHHHHHHHHHHcCcEEe----C---ChHHHHhcCCE
Confidence            457899999 6999999999999886310   00  055566543222111  11122211    1   23445678999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||.+..
T Consensus        70 Viiavp   75 (245)
T PRK07634         70 IVLAMP   75 (245)
T ss_pred             EEEecC
Confidence            997766

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.45  E-value=0.048  Score=50.29  Aligned_cols=38  Identities=18%  Similarity=0.203  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      ..+++|.|+|+ |.+|..++..|++.|++         |++++++...
T Consensus         2 ~~~~~I~vIGa-G~mG~~iA~~l~~~g~~---------V~~~d~~~~~   39 (311)
T PRK06130          2 NPIQNLAIIGA-GTMGSGIAALFARKGLQ---------VVLIDVMEGA   39 (311)
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHhCCCe---------EEEEECCHHH
Confidence            45678999995 99999999999999999         9999986643

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=95.44  E-value=0.046  Score=51.89  Aligned_cols=69  Identities=16%  Similarity=0.113  Sum_probs=53.2

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEEE
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMSN  102 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi~  102 (366)
                      ||+|+| +|..|..+++.+.+.|++         |++++..+.........  ..+..|..|.+.+.++.+  ++|+|+.
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~---------v~~~d~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVE---------VIAVDRYANAPAMQVAH--RSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCE---------EEEEeCCCCCchhhhCc--eEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            699999 599999999999999999         99998875432221111  566788889988888776  7999986


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      ...
T Consensus        69 ~~e   71 (380)
T TIGR01142        69 EIE   71 (380)
T ss_pred             ccC
Confidence            543

This enzyme is an alternative to PurN (TIGR00639)

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=95.44  E-value=0.039  Score=51.52  Aligned_cols=35  Identities=20%  Similarity=0.230  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      +||+|.|+| +|.+|..++..|.+.|++         |++++|..
T Consensus         1 ~~mkI~IiG-~G~mG~~~A~~L~~~G~~---------V~~~~r~~   35 (341)
T PRK08229          1 MMARICVLG-AGSIGCYLGGRLAAAGAD---------VTLIGRAR   35 (341)
T ss_pred             CCceEEEEC-CCHHHHHHHHHHHhcCCc---------EEEEecHH
Confidence            357899998 699999999999999999         99999864

>PRK14851 hypothetical protein; Provisional

Probab=95.43  E-value=0.18  Score=51.41  Aligned_cols=100  Identities=12%  Similarity=0.093  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc------cc-------------------c--cccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN------EH-------------------M--MEDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~------~~-------------------~--~~~~   74 (366)
                      ...+|+|.| .|.+|++++..|...|...        ++++|...-      +.                   .  ....
T Consensus        42 ~~~~VlIvG-~GGlGs~va~~Lar~GVG~--------l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~  112 (679)
T PRK14851         42 AEAKVAIPG-MGGVGGVHLITMVRTGIGR--------FHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPF  112 (679)
T ss_pred             hcCeEEEEC-cCHHHHHHHHHHHHhCCCe--------EEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCC
Confidence            457899999 5999999999999998641        555542110      00                   0  0012


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ..++.+...++ .+.+..+++++|+||.+.-..                ....-..+.+.|.+.+++   +|+.+.
T Consensus       113 ~~I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~----------------~~~~r~~l~~~c~~~~iP---~i~~g~  168 (679)
T PRK14851        113 LEITPFPAGIN-ADNMDAFLDGVDVVLDGLDFF----------------QFEIRRTLFNMAREKGIP---VITAGP  168 (679)
T ss_pred             CeEEEEecCCC-hHHHHHHHhCCCEEEECCCCC----------------cHHHHHHHHHHHHHCCCC---EEEeec
Confidence            24556666665 456777889999999665411                022334577788898886   777653

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.43  E-value=0.069  Score=48.98  Aligned_cols=109  Identities=14%  Similarity=0.010  Sum_probs=67.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----ccc-cceEEEccCCChhHHHhhhcCCCE
Q 044498           26 ISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----DMF-CHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----~~~-~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      |.|+|+ |.+|..++..|...|. +         |+.++.++......    ... ........+....+.. .++++|+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~e---------V~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~~-~l~dADi   69 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGD---------VVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYE-DIAGSDV   69 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcE---------EEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCHH-HhCCCCE
Confidence            578998 9999999999988775 8         99999876432100    000 0000001111101122 3689999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ||.+++...   ....+..+.+..|+.....+++.+.+...+ ..+|.+|
T Consensus        70 VIit~g~p~---~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~-~~iIv~s  115 (300)
T cd01339          70 VVITAGIPR---KPGMSRDDLLGTNAKIVKEVAENIKKYAPN-AIVIVVT  115 (300)
T ss_pred             EEEecCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEec
Confidence            999998543   222344456778999999999999888755 1344444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.41  E-value=0.049  Score=53.62  Aligned_cols=36  Identities=22%  Similarity=0.263  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      .|+|.|+| +|.+|+.++..|+..|++         |+++++++..
T Consensus         4 i~kIavIG-~G~MG~~iA~~la~~G~~---------V~v~D~~~~~   39 (495)
T PRK07531          4 IMKAACIG-GGVIGGGWAARFLLAGID---------VAVFDPHPEA   39 (495)
T ss_pred             cCEEEEEC-cCHHHHHHHHHHHhCCCe---------EEEEeCCHHH
Confidence            46899998 699999999999999999         9999987654

>PRK06395 phosphoribosylamine--glycine ligase; Provisional

Probab=95.41  E-value=0.3  Score=47.25  Aligned_cols=69  Identities=16%  Similarity=0.130  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      ++|||||+| +|.-..+|+..|.+.|.+         |+++-.+.+........  .++..|..|.+.+.++.+  ++|.
T Consensus         1 ~~~kVLvlG-~G~re~al~~~l~~~g~~---------v~~~~~~~Npg~~~~a~--~~~~~~~~d~e~l~~~~~~~~id~   68 (435)
T PRK06395          1 MTMKVMLVG-SGGREDAIARAIKRSGAI---------LFSVIGHENPSIKKLSK--KYLFYDEKDYDLIEDFALKNNVDI   68 (435)
T ss_pred             CceEEEEEC-CcHHHHHHHHHHHhCCCe---------EEEEECCCChhhhhccc--ceeecCCCCHHHHHHHHHHhCCCE
Confidence            368999999 588888899899988887         77764432211111111  345688889888887764  6998


Q ss_pred             EEE
Q 044498          100 MSN  102 (366)
Q Consensus       100 vi~  102 (366)
                      ||-
T Consensus        69 Vi~   71 (435)
T PRK06395         69 VFV   71 (435)
T ss_pred             EEE
Confidence            883

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.41  E-value=0.045  Score=49.69  Aligned_cols=56  Identities=9%  Similarity=0.038  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|.|+|.+|.+|+.++..|+++|++         |+++.+...                     .+.+..+++|+||
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gat---------Vtv~~~~t~---------------------~l~e~~~~ADIVI  207 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCS---------VTVVHSRST---------------------DAKALCRQADIVV  207 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCE---------EEEECCCCC---------------------CHHHHHhcCCEEE
Confidence            6889999999999999999999999999         999865432                     2555667899999


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      -+.|..
T Consensus       208 savg~~  213 (301)
T PRK14194        208 AAVGRP  213 (301)
T ss_pred             EecCCh
Confidence            888843

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.28  E-value=0.041  Score=52.63  Aligned_cols=67  Identities=12%  Similarity=0.031  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ..+++|+|+|. |.||+.+++.|...|.+         |+++++.+.+.......++.+.     +   +.++++++|+|
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~---------ViV~d~dp~ra~~A~~~G~~v~-----~---l~eal~~aDVV  271 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGAR---------VIVTEVDPICALQAAMDGFRVM-----T---MEEAAELGDIF  271 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEcCCchhhHHHHhcCCEec-----C---HHHHHhCCCEE
Confidence            36789999995 99999999999999999         9999987755433222233321     2   34556789999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |.++|
T Consensus       272 I~aTG  276 (425)
T PRK05476        272 VTATG  276 (425)
T ss_pred             EECCC
Confidence            98776

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.28  E-value=0.023  Score=46.78  Aligned_cols=70  Identities=11%  Similarity=0.092  Sum_probs=43.7

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--c------cccceEEEccCCChhHHHhhhcC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--D------MFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~------~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ||.|+|| |-.|.+++..|.++|++         |..+.|+.......  .      ..++.+ ...+.-..++.+++++
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~---------V~l~~~~~~~~~~i~~~~~n~~~~~~~~l-~~~i~~t~dl~~a~~~   69 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHE---------VTLWGRDEEQIEEINETRQNPKYLPGIKL-PENIKATTDLEEALED   69 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEE---------EEEETSCHHHHHHHHHHTSETTTSTTSBE-ETTEEEESSHHHHHTT
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCE---------EEEEeccHHHHHHHHHhCCCCCCCCCccc-CcccccccCHHHHhCc
Confidence            6899995 99999999999999999         99999875321100  0      011111 1111112346677889


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      .|+||-+..
T Consensus        70 ad~IiiavP   78 (157)
T PF01210_consen   70 ADIIIIAVP   78 (157)
T ss_dssp             -SEEEE-S-
T ss_pred             ccEEEeccc
Confidence            999996555

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.22  E-value=0.024  Score=52.27  Aligned_cols=70  Identities=13%  Similarity=0.104  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ..++|+|+|+ |-+|..+++.|...| .+         |++++|+..+.... ...+..     ..+.+++.+.+.++|+
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~---------V~v~~r~~~ra~~la~~~g~~-----~~~~~~~~~~l~~aDv  241 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAE---------ITIANRTYERAEELAKELGGN-----AVPLDELLELLNEADV  241 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCE---------EEEEeCCHHHHHHHHHHcCCe-----EEeHHHHHHHHhcCCE
Confidence            5689999996 999999999999866 56         88898876543221 112222     2233456666788999


Q ss_pred             EEEcccc
Q 044498          100 MSNLAAD  106 (366)
Q Consensus       100 vi~~a~~  106 (366)
                      ||.+.+.
T Consensus       242 Vi~at~~  248 (311)
T cd05213         242 VISATGA  248 (311)
T ss_pred             EEECCCC
Confidence            9998884

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.21  E-value=0.087  Score=48.64  Aligned_cols=74  Identities=16%  Similarity=0.082  Sum_probs=47.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----------ccccce--EEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----------DMFCHE--FHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----------~~~~v~--~~~~D~~~~~   88 (366)
                      ..++|.|+|+ |.+|+.++..|+..|++         |+++++.+......           ...+..  -....+.-..
T Consensus         6 ~i~~VaVIGa-G~MG~giA~~~a~aG~~---------V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~   75 (321)
T PRK07066          6 DIKTFAAIGS-GVIGSGWVARALAHGLD---------VVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVA   75 (321)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCe---------EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecC
Confidence            3468999995 99999999999999999         99999875421110           000000  0001111122


Q ss_pred             HHHhhhcCCCEEEEccc
Q 044498           89 NCLRMTSGVDNMSNLAA  105 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~  105 (366)
                      ++.++++++|.||-++.
T Consensus        76 ~l~~av~~aDlViEavp   92 (321)
T PRK07066         76 TIEACVADADFIQESAP   92 (321)
T ss_pred             CHHHHhcCCCEEEECCc
Confidence            45567789999997765

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.20  E-value=0.098  Score=48.09  Aligned_cols=74  Identities=11%  Similarity=0.051  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~--~~   96 (366)
                      ...+|+|+|++|-+|..+++.+...|.+         |+++++...+.......++..+ .+..+.+   .+.+..  ++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~---------v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~  211 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGAT---------VVGAAGGPAKTALVRALGADVA-VDYTRPDWPDQVREALGGGG  211 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCCEE-EecCCccHHHHHHHHcCCCC
Confidence            4568999999999999999999999998         9998876654332222333222 2333322   233333  35


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|.++++.+
T Consensus       212 ~d~vl~~~g  220 (324)
T cd08244         212 VTVVLDGVG  220 (324)
T ss_pred             ceEEEECCC
Confidence            999999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.20  E-value=0.07  Score=47.92  Aligned_cols=72  Identities=17%  Similarity=0.134  Sum_probs=56.6

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CC
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GV   97 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~   97 (366)
                      ..+..||++.| +|=+|..++=.+...|.+         |++++|-.+.....-.  ...+..|..|.+++...++  ++
T Consensus         9 ~~~a~kvmLLG-SGELGKEvaIe~QRLG~e---------ViAVDrY~~APAmqVA--hrs~Vi~MlD~~al~avv~rekP   76 (394)
T COG0027           9 RPQATKVMLLG-SGELGKEVAIEAQRLGVE---------VIAVDRYANAPAMQVA--HRSYVIDMLDGDALRAVVEREKP   76 (394)
T ss_pred             CCCCeEEEEec-CCccchHHHHHHHhcCCE---------EEEecCcCCChhhhhh--hheeeeeccCHHHHHHHHHhhCC
Confidence            34567899999 799999999999999999         9999987653322211  2567789999999999875  68


Q ss_pred             CEEEEc
Q 044498           98 DNMSNL  103 (366)
Q Consensus        98 d~vi~~  103 (366)
                      |.||--
T Consensus        77 d~IVpE   82 (394)
T COG0027          77 DYIVPE   82 (394)
T ss_pred             Ceeeeh
Confidence            988844

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.20  E-value=0.17  Score=41.50  Aligned_cols=33  Identities=21%  Similarity=0.164  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW   64 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r   64 (366)
                      ++++|+|+|| |-+|...++.|++.|++         |++++.
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~---------V~VIsp   44 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAF---------VTVVSP   44 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEcC
Confidence            6789999996 99999999999999999         998853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	366
2c59_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-157
2c54_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-156
2c5a_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-156
2c5e_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-156
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		1e-14
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		3e-12
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		3e-12
1e7s_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1		6e-09
1bsv_A	321	Gdp-Fucose Synthetase From Escherichia Coli Complex		6e-09
4ef7_B	337	Udp-Xylose Synthase Length = 337		7e-09
1e7q_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1		7e-09
1e6u_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le		1e-08
1bws_A	321	Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E		2e-08
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		2e-08
1e7r_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1		5e-08
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-05
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		2e-05
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		4e-05
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		4e-05
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		4e-05
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		3e-04
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		5e-04
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		9e-04

>pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379

Iteration: 1
 Score =  550 bits (1417), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 273/383 (71%), Positives = 305/383 (79%), Gaps = 29/383 (7%)
Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT YG  TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IA
Sbjct: 8   GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 58
Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 118
Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT---DVKESEAWPAEPQDAY 178
           Y NT ISF+M+EAAR+NG+    FF+ SSACIYPEFKQL+T    +KES+AWPAEPQDAY
Sbjct: 119 YNNTMISFNMIEAARINGIKR--FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAY 176
Query: 179 GLEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFE 223
           GLEKLATE LCKHY KDF IECR+                 EKAPAAF RKA TSTD FE
Sbjct: 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 236
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPI
Sbjct: 237 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 296
Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YG
Sbjct: 297 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYG 356
Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV TQAPVQLGS  A D KE
Sbjct: 357 SSKVVGTQAPVQLGSLRAADGKE 379

>pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379

Iteration: 1
 Score =  549 bits (1414), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/383 (71%), Positives = 305/383 (79%), Gaps = 29/383 (7%)
Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT YG  TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IA
Sbjct: 8   GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 58
Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 118
Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT---DVKESEAWPAEPQDAY 178
           Y NT ISF+M+EAAR+NG+    FF+ SSACIYPEFKQL+T    +KES+AWPAEPQDAY
Sbjct: 119 YNNTMISFNMIEAARINGIKR--FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAY 176
Query: 179 GLEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFE 223
           GLE+LATE LCKHY KDF IECR+                 EKAPAAF RKA TSTD FE
Sbjct: 177 GLERLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 236
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPI
Sbjct: 237 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 296
Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YG
Sbjct: 297 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYG 356
Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV TQAPVQLGS  A D KE
Sbjct: 357 SSKVVGTQAPVQLGSLRAADGKE 379

>pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379

Iteration: 1
 Score =  548 bits (1413), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/383 (71%), Positives = 305/383 (79%), Gaps = 29/383 (7%)
Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT YG  TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IA
Sbjct: 8   GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 58
Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 118
Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT---DVKESEAWPAEPQDAY 178
           Y NT ISF+M+EAAR+NG+    FF+ SSACIYPEFKQL+T    +KES+AWPAEPQDA+
Sbjct: 119 YNNTMISFNMIEAARINGIKR--FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 176
Query: 179 GLEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFE 223
           GLEKLATE LCKHY KDF IECR+                 EKAPAAF RKA TSTD FE
Sbjct: 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 236
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPI
Sbjct: 237 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 296
Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YG
Sbjct: 297 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYG 356
Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV TQAPVQLGS  A D KE
Sbjct: 357 SSKVVGTQAPVQLGSLRAADGKE 379

>pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379

Iteration: 1
 Score =  548 bits (1412), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/383 (71%), Positives = 304/383 (79%), Gaps = 29/383 (7%)
Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT YG  TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IA
Sbjct: 8   GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 58
Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 118
Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT---DVKESEAWPAEPQDAY 178
           Y NT ISF+M+EAAR+NG+    FF+ SSACIYPEFKQL+T    +KES+AWPAEPQDAY
Sbjct: 119 YNNTMISFNMIEAARINGIKR--FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAY 176
Query: 179 GLEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFE 223
           GLEKLATE LCKHY KDF IECR+                 E APAAF RKA TSTD FE
Sbjct: 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREAAPAAFCRKAQTSTDRFE 236
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPI
Sbjct: 237 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 296
Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YG
Sbjct: 297 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYG 356
Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV TQAPVQLGS  A D KE
Sbjct: 357 SSKVVGTQAPVQLGSLRAADGKE 379

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 29/231 (12%)
Query: 121 MYKNTTI-SFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG 179
           +Y+N  + ++ +LEA R  GV  + F   S++ +Y E K + T     E +P  P   YG
Sbjct: 86  IYRNNVLATYRLLEAMRKAGVSRIVF--TSTSTVYGEAKVIPT----PEDYPTHPISLYG 139
Query: 180 LEKLATEGLCKHYTKDFEIEC------RLVGEKAPAA----FSRKAVTSTDNFEMWGDGK 229
             KLA E L + Y   F+++        ++G ++       F  K   + +  E+ G+G+
Sbjct: 140 ASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGE 199
Query: 230 QTRSLTFIDECVEGVLRLIKSDFR-EPLNIGSDEMVSINEMAEIILSFENEKLPIHP-IP 287
           Q +S  +I +CV+ +L  ++ D R    NIGS++ + +  +AEI+     E+L + P   
Sbjct: 200 QNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVC----EELGLSPRFR 255
Query: 288 GPEGVRGRNSDDTLI------NEELGWAPTMKQKDELRITYFWIKEQVEKE 332
              G RG   D  ++       + LGW P    ++ +R+    + E +++E
Sbjct: 256 FTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVEDLDEE 306

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 123 KNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK 182
           +N   +F++LE AR  GV   T  F SS+ +Y +   + T  +E    P +P   YG  K
Sbjct: 84  ENVVATFNVLEWARQTGVR--TVVFASSSTVYGDADVIPTPEEE----PYKPISVYGAAK 137
Query: 183 LATEGLCKHYTKDFEIEC------RLVGEKAPAA----FSRKAVTSTDNFEMWGDGKQTR 232
            A E +C  Y + F + C       +VG +        F  K   + +  E+ GDG Q +
Sbjct: 138 AAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRK 197
Query: 233 SLTFIDECVEGVLRLIKSDFRE------PLNIGSDEMVSINEMAEIILSFENEKLPIHPI 286
           S  ++ + VE  L   K  F E       LN+G+ + V + ++A+I+      +  I  +
Sbjct: 198 SYLYVRDAVEATLAAWKK-FEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLV 256
Query: 287 PGPEGVRGRNSDD---TLINEEL----GWAPTMKQKDELRIT 321
           P     RG   D    TL   +L    GW PTM   + ++ T
Sbjct: 257 PSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKT 298

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 123 KNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK 182
           +N   +F++LE AR  GV   T  F SS+ +Y +   + T  +E    P +P   YG  K
Sbjct: 88  ENVVATFNVLEWARQTGVR--TVVFASSSTVYGDADVIPTPEEE----PYKPISVYGAAK 141
Query: 183 LATEGLCKHYTKDFEIEC------RLVGEKAPAA----FSRKAVTSTDNFEMWGDGKQTR 232
            A E +C  Y + F + C       +VG +        F  K   + +  E+ GDG Q +
Sbjct: 142 AAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRK 201
Query: 233 SLTFIDECVEGVLRLIKSDFRE------PLNIGSDEMVSINEMAEIILSFENEKLPIHPI 286
           S  ++ + VE  L   K  F E       LN+G+ + V + ++A+I+      +  I  +
Sbjct: 202 SYLYVRDAVEATLAAWKK-FEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLV 260
Query: 287 PGPEGVRGRNSDD---TLINEEL----GWAPTMKQKDELRIT 321
           P     RG   D    TL   +L    GW PTM   + ++ T
Sbjct: 261 PSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKT 302

>pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 113/285 (39%), Gaps = 35/285 (12%)
Query: 78  EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
           E +L+D R + +    +  +D +   AA +GG+    +  +  +Y+N  I  +++ AA  
Sbjct: 38  ELNLLDSRAVHDFF-ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 96
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKDF 196
           N V  L   F+ S+CIYP+  +      E      EP  + Y + ++A   LC+ Y + +
Sbjct: 97  NDVNKL--LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIARIAGIKLCESYNRQY 154
Query: 197 EIECRLV----------------GEKAPAAFSR---KAVTSTDNFEMWGDGKQTRSLTFI 237
             + R V                    PA   R       S  +  +WG G   R    +
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHV 214
Query: 238 DECVEGVLRLIK----------SDFREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPI 286
           D+     + +++                +N+G+    +I E+A+ I      K   +   
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 274
Query: 287 PGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK 331
             P+G   +  D T ++ +LGW   +  +  L  TY W  E  ++
Sbjct: 275 SKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDR 318

>pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 113/285 (39%), Gaps = 35/285 (12%)
Query: 78  EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
           E +L+D R + +    +  +D +   AA +GG+    +  +  +Y+N  I  +++ AA  
Sbjct: 38  ELNLLDSRAVHDFF-ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 96
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKDF 196
           N V  L   F+ S+CIYP+  +      E      EP  + Y + K+A   LC+ Y + +
Sbjct: 97  NDVNKL--LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154
Query: 197 EIECRLV----------------GEKAPAAFSRKAVTSTDN---FEMWGDGKQTRSLTFI 237
             + R V                    PA   R    +  N     +WG G   R    +
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHV 214
Query: 238 DECVEGVLRLIK----------SDFREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPI 286
           D+     + +++                +N+G+    +I E+A+ I      K   +   
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 274
Query: 287 PGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK 331
             P+G   +  D T ++ +LGW   +  +  L  TY W  E  ++
Sbjct: 275 SKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDR 318

>pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 113/285 (39%), Gaps = 35/285 (12%)
Query: 78  EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
           E +L+D R + +    +  +D +   AA +GG+    +  +  +Y+N  I  +++ AA  
Sbjct: 38  ELNLLDSRAVHDFF-ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 96
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKDF 196
           N V  L   F+ ++CIYP+  +      E      EP  + Y + K+A   LC+ Y + +
Sbjct: 97  NDVNKL--LFLGASCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154
Query: 197 EIECRLV----------------GEKAPAAFSR---KAVTSTDNFEMWGDGKQTRSLTFI 237
             + R V                    PA   R       S  +  +WG G   R    +
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHV 214
Query: 238 DECVEGVLRLIK----------SDFREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPI 286
           D+     + +++                +N+G+    +I E+A+ I      K   +   
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 274
Query: 287 PGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK 331
             P+G   +  D T ++ +LGW   +  +  L  TY W  E  ++
Sbjct: 275 SKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDR 318

>pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 112/285 (39%), Gaps = 35/285 (12%)
Query: 78  EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
           E +L+D R + +    +  +D +   AA +GG+    +  +  +Y+N  I  +++ AA  
Sbjct: 38  ELNLLDSRAVHDFF-ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 96
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKDF 196
           N V  L   F+ S+CIYP+  +      E      EP  + Y + K+A   LC+ Y + +
Sbjct: 97  NDVNKL--LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154
Query: 197 EIECRLV----------------GEKAPAAFSR---KAVTSTDNFEMWGDGKQTRSLTFI 237
             + R V                    PA   R          +  +WG G   R    +
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV 214
Query: 238 DECVEGVLRLIK----------SDFREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPI 286
           D+     + +++                +N+G+    +I E+A+ I      K   +   
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 274
Query: 287 PGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK 331
             P+G   +  D T ++ +LGW   +  +  L  TY W  E  ++
Sbjct: 275 SKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDR 318

>pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 113/285 (39%), Gaps = 35/285 (12%)
Query: 78  EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
           E +L+D R + +    +  +D +   AA +GG+    +  +  +Y+N  I  +++ AA  
Sbjct: 38  ELNLLDSRAVHDFF-ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 96
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKDF 196
           N V  L   F+ S+CIYP+  +      E      EP  + Y + K+A   LC+ Y + +
Sbjct: 97  NDVNKL--LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154
Query: 197 EIECRLV----------------GEKAPAAFSRKAVTSTDN---FEMWGDGKQTRSLTFI 237
             + R V                    PA   R    +  N     +WG G   R    +
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHV 214
Query: 238 DECVEGVLRLIK----------SDFREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPI 286
           D+     + +++                +N+G+    +I ++A+ I      K   +   
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRDLAQTIAKVVGYKGRVVFDA 274
Query: 287 PGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK 331
             P+G   +  D T ++ +LGW   +  +  L  TY W  E  ++
Sbjct: 275 SKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDR 318

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 33/339 (9%)
Query: 11  DKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM 70
           + L  + H    + RI   G  GF+ S++  +L  + H  T + N        +   +  
Sbjct: 15  ENLYFQGHXEKDRKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNF-------FTGRKRN 67
Query: 71  MEDMFCHE-FHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISF 129
           +E    HE F L++  V++    +   VD + +LA+      +   N    +  NT  + 
Sbjct: 68  VEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPASPPNY-XYNPIKTLKTNTIGTL 123
Query: 130 DMLEAARMNGVMSLTFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEG 187
           + L  A+  G   L     S++ +Y  PE      D       P  P+  Y   K   E 
Sbjct: 124 NXLGLAKRVGARLL---LASTSEVYGDPEVHPQSEDYW-GHVNPIGPRACYDEGKRVAET 179
Query: 188 LCKHYTKDFEIECRLV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSL 234
            C  Y K   +E R+                +  + F  +A+   +   ++G G QTR+ 
Sbjct: 180 XCYAYXKQEGVEVRVARIFNTFGPRXHXNDGRVVSNFILQALQG-EPLTVYGSGSQTRAF 238
Query: 235 TFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVR 293
            ++ + V G++ L  S+   P+N+G+ E  +I E A++I +       I  +    +  +
Sbjct: 239 QYVSDLVNGLVALXNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQ 298
Query: 294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKE 332
            R  D       LGW P +  ++ L     + ++++E +
Sbjct: 299 KRKPDIKKAKLXLGWEPVVPLEEGLNKAIHYFRKELEYQ 337

>pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 112/285 (39%), Gaps = 35/285 (12%)
Query: 78  EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
           E +L+D R + +    +  +D +   AA +GG+    +  +  +Y+N  I  +++ AA  
Sbjct: 38  ELNLLDSRAVHDFF-ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 96
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKDF 196
           N V  L   F+ S+CIYP+  +      E      EP  +   + K+A   LC+ Y + +
Sbjct: 97  NDVNKL--LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPEAIAKIAGIKLCESYNRQY 154
Query: 197 EIECRLV----------------GEKAPAAFSR---KAVTSTDNFEMWGDGKQTRSLTFI 237
             + R V                    PA   R       S  +  +WG G   R    +
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHV 214
Query: 238 DECVEGVLRLIK----------SDFREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPI 286
           D+     + +++                +N+G+    +I E+A+ I      K   +   
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 274
Query: 287 PGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK 331
             P+G   +  D T ++ +LGW   +  +  L  TY W  E  ++
Sbjct: 275 SKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDR 318

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 75  FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEA 134
           FC  F   D+R +  C ++  GVD++ + AA +G +     +       N T   ++L A
Sbjct: 81  FC--FIEGDIRDLTTCEQVMKGVDHVLHQAA-LGSVPRSIVDPITTNATNITGFLNILHA 137
Query: 135 ARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK 194
           A+   V S T+   +S+  Y +   L   V+E+   P  P   Y + K   E   + Y +
Sbjct: 138 AKNAQVQSFTY--AASSSTYGDHPAL-PKVEENIGNPLSP---YAVTKYVNEIYAQVYAR 191
Query: 195 DFEIECRLVGEKAPAAFSRK----------------AVTSTDNFEMWGDGKQTRSLTFID 238
            +  +   +G +    F R+                A+   D+  + GDG+ +R   +ID
Sbjct: 192 TYGFKT--IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYID 249
Query: 239 ECVE-GVLRLIKSDFREP--LNIGSDEMVSINEMA-----EIILSFENEKLPIHPIPGPE 290
             ++  +L  +  D  +    N+   +  ++NE++     E+ L    +KL I       
Sbjct: 250 NVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRS 309
Query: 291 G-VRGRNSDDTLINEELGWAPTMKQKDELRITYFW 324
           G VR   +D T   + L + P +K ++ LR++  W
Sbjct: 310 GDVRASQADVTKAIDLLKYRPNIKIREGLRLSMPW 344

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 22/315 (6%)
Query: 24  LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD 83
           +++   G  GFI SN  R +  E+H    + N   +       N   +ED   + F   D
Sbjct: 4   MKLLVTGGMGFIGSNFIRYI-LEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGD 62
Query: 84  LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
           +   +    +   VD + +LAA+      I S+  + ++ N   ++ +LE+ R      +
Sbjct: 63  VADYELVKELVRKVDGVVHLAAESHVDRSI-SSPEIFLHSNVIGTYTLLESIRRENP-EV 120
Query: 144 TFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC--- 200
            F  VS+  +Y +   L     E++     P   Y   K A++ L   +T+ + +     
Sbjct: 121 RFVHVSTDEVYGDI--LKGSFTENDR--LMPSSPYSATKAASDMLVLGWTRTYNLNASIT 176
Query: 201 RLVGEKAPAAFSRKAVTSTD-------NFEMWGDGKQTRSLTFIDECVEGV-LRLIKSDF 252
           R      P  F  K +  T           ++G GK  R   ++++ V  + L L+K + 
Sbjct: 177 RCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES 236
Query: 253 REPLNIGSDEMVSINEMAEIILSF--ENEKLPIHPIPGPEGVRGRNSDDTL-INEELGWA 309
           RE  NI + E  +  E+ +IIL    + E+L I  +    G   R S D+  I  +L W 
Sbjct: 237 REIYNISAGEEKTNLEVVKIILRLMGKGEEL-IELVEDRPGHDLRYSLDSWKITRDLKWR 295
Query: 310 PTMKQKDELRITYFW 324
           P     + ++ T  W
Sbjct: 296 PKYTFDEGIKKTIDW 310

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 75  FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEA 134
           FC  F   D+R +  C ++  GVD++ + AA +G +     +       N T   ++L A
Sbjct: 94  FC--FIEGDIRDLTTCEQVMKGVDHVLHQAA-LGSVPRSIVDPITTNATNITGFLNILHA 150
Query: 135 ARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK 194
           A+   V S T+   +S+  Y +   L   V+E+   P  P   Y + K   E   + Y +
Sbjct: 151 AKNAQVQSFTY--AASSSTYGDHPAL-PKVEENIGNPLSP---YAVTKYVNEIYAQVYAR 204
Query: 195 DFEIECRLVGEKAPAAFSRK----------------AVTSTDNFEMWGDGKQTRSLTFID 238
            +  +   +G +    F R+                A+   D+  + GDG+ +R   +ID
Sbjct: 205 TYGFKT--IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYID 262
Query: 239 ECVE-GVLRLIKSDFREP--LNIGSDEMVSINEMA-----EIILSFENEKLPIHPIPGPE 290
             ++  +L  +  D  +    N+   +  ++NE++     E+ L    +KL I       
Sbjct: 263 NVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRS 322
Query: 291 G-VRGRNSDDTLINEELGWAPTMKQKDELRITYFW 324
           G VR   +D T   + L + P +K ++ LR++  W
Sbjct: 323 GDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPW 357

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 34/267 (12%)
Query: 83  DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS 142
           D+R +  C ++  GVD++ + AA +G +     +       N T   ++L AA+   V S
Sbjct: 87  DIRDLTTCEQVMKGVDHVLHQAA-LGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145
Query: 143 LTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRL 202
            T+   +S+  Y +   L   V+E+   P  P   Y + K   E   + Y + +  +   
Sbjct: 146 FTY--AASSSTYGDHPAL-PKVEENIGNPLSP---YAVTKYVNEIYAQVYARTYGFKT-- 197
Query: 203 VGEKAPAAFSRK----------------AVTSTDNFEMWGDGKQTRSLTFIDECVE-GVL 245
           +G +    F R+                A+   D+  + GDG+ +R   +ID  ++  +L
Sbjct: 198 IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNIL 257
Query: 246 RLIKSDFREP--LNIGSDEMVSINEMA-----EIILSFENEKLPIHPIPGPEG-VRGRNS 297
             +  D  +    N+   +  ++NE++     E+ L    +KL I       G VR   +
Sbjct: 258 SALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQA 317
Query: 298 DDTLINEELGWAPTMKQKDELRITYFW 324
           D T   + L + P +K ++ LR++  W
Sbjct: 318 DVTKAIDLLKYRPNIKIREGLRLSMPW 344

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 34/267 (12%)
Query: 83  DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS 142
           D+R +  C ++  GVD++ + AA +G +     +       N T   ++L AA+   V S
Sbjct: 81  DIRDLTTCEQVMKGVDHVLHQAA-LGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS 139
Query: 143 LTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRL 202
            T+   +S+  Y +   L   V+E+   P  P   Y + K   E   + Y + +  +   
Sbjct: 140 FTY--AASSSTYGDHPAL-PKVEENIGNPLSP---YAVTKYVNEIYAQVYARTYGFKT-- 191
Query: 203 VGEKAPAAFSRK----------------AVTSTDNFEMWGDGKQTRSLTFIDECVE-GVL 245
           +G +    F R+                A+   D+  + GDG+ +R   +ID  ++  +L
Sbjct: 192 IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNIL 251
Query: 246 RLIKSDFREP--LNIGSDEMVSINEMA-----EIILSFENEKLPIHPIPGPEG-VRGRNS 297
             +  D  +    N+   +  ++NE++     E+ L    +KL I       G VR   +
Sbjct: 252 SALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQA 311
Query: 298 DDTLINEELGWAPTMKQKDELRITYFW 324
           D T   + L + P +K ++ LR++  W
Sbjct: 312 DVTKAIDLLKYRPNIKIREGLRLSMPW 338

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 116 NHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ 175
           N  ++M  N     ++LE AR      +   + SSA +Y   K  +  V ++E+    P+
Sbjct: 107 NQELVMKTNYQAFLNLLEIARSKKAKVI---YASSAGVYGNTKAPNV-VGKNES----PE 158
Query: 176 DAYGLEKLAT-EGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTST-----------DNFE 223
           + YG  KL   E +  H   + ++  R      P  F ++   S               +
Sbjct: 159 NVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVK 218
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEII 273
           ++  G+Q R   +I++ ++  ++ +K+      N+G  +  S NE+  I+
Sbjct: 219 LFEFGEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSIL 268

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 123/325 (37%), Gaps = 31/325 (9%)
Query: 24  LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-------FC 76
           +R+   G  GFI S+  R+L +  +        + + +  +  N   +  +       F 
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 77  HEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAAR 136
           H     D+R      R   GVD + + AA+      I +  SV    N   +  +L+ A 
Sbjct: 61  HG----DIRDAGLLARELRGVDAIVHFAAESHVDRSI-AGASVFTETNVQGTQTLLQCAV 115
Query: 137 MNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF 196
             GV  +    VS+  +Y     +D+    +E+ P EP   Y   K  ++ + + Y + +
Sbjct: 116 DAGVGRVVH--VSTNQVY---GSIDSG-SWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169
Query: 197 EIECRLV---GEKAPAAFSRKAV-------TSTDNFEMWGDGKQTRSLTFIDECVEGV-L 245
            ++ R+        P     K +              ++GDG   R     D+   G+ L
Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229
Query: 246 RLIKSDFREPLNIGSDEMVSINEMAEIIL-SFENEKLPIHPIPGPEGVRGRNS-DDTLIN 303
            L      E  +IG    ++  E+  I+L S   +   +  +   +G   R S D   I 
Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIE 289
Query: 304 EELGWAPTMKQKDELRITYFWIKEQ 328
            ELG+ P +   D L  T  W +E 
Sbjct: 290 RELGYRPQVSFADGLARTVRWYREN 314

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 123/325 (37%), Gaps = 31/325 (9%)
Query: 24  LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-------FC 76
           +R+   G  GFI S+  R+L +  +        + + +  +  N   +  +       F 
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 77  HEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAAR 136
           H     D+R      R   GVD + + AA+      I +  SV    N   +  +L+ A 
Sbjct: 61  HG----DIRDAGLLARELRGVDAIVHFAAESHVDRSI-AGASVFTETNVQGTQTLLQCAV 115
Query: 137 MNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF 196
             GV  +    VS+  +Y     +D+    +E+ P EP   Y   K  ++ + + Y + +
Sbjct: 116 DAGVGRVVH--VSTDEVY---GSIDSG-SWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169
Query: 197 EIECRLV---GEKAPAAFSRKAV-------TSTDNFEMWGDGKQTRSLTFIDECVEGV-L 245
            ++ R+        P     K +              ++GDG   R     D+   G+ L
Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229
Query: 246 RLIKSDFREPLNIGSDEMVSINEMAEIIL-SFENEKLPIHPIPGPEGVRGRNS-DDTLIN 303
            L      E  +IG    ++  E+  I+L S   +   +  +   +G   R S D   I 
Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIE 289
Query: 304 EELGWAPTMKQKDELRITYFWIKEQ 328
            ELG+ P +   D L  T  W +E 
Sbjct: 290 RELGYRPQVSFADGLARTVRWYREN 314

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	366
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-135
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	6e-37
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	9e-31
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-29
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	2e-29
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-28
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-28
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	4e-28
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	8e-28
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-26
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-26
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-25
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-25
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-21
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	4e-20
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	2e-19
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-19
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	9e-19
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-15
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	5e-14
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-13
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	3e-10
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	6e-10
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-09
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	5e-09
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  389 bits (1001), Expect = e-135
 Identities = 273/383 (71%), Positives = 305/383 (79%), Gaps = 29/383 (7%)

Query: 2   GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
           GT YG  TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IA
Sbjct: 8   GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 58

Query: 62  SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
           SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59  SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 118

Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV---KESEAWPAEPQDAY 178
           Y NT ISF+M+EAAR+NG+    FF+ SSACIYPEFKQL+T     KES+AWPAEPQDA+
Sbjct: 119 YNNTMISFNMIEAARINGIK--RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 176

Query: 179 GLEKLATEGLCKHYTKDFEIECRLV------G---------EKAPAAFSRKAVTSTDNFE 223
           GLEKLATE LCKHY KDF IECR+       G         EKAPAAF RKA TSTD FE
Sbjct: 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 236

Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
           MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPI
Sbjct: 237 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 296

Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
           H IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YG
Sbjct: 297 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYG 356

Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
           SS VV TQAPVQLGS  A D KE
Sbjct: 357 SSKVVGTQAPVQLGSLRAADGKE 379

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  134 bits (340), Expect = 6e-37
 Identities = 49/313 (15%), Positives = 107/313 (34%), Gaps = 41/313 (13%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GF+   +   +K++ +    +  ++       NK  +       +E+ + D  + D 
Sbjct: 9   GGTGFLGQYVVESIKNDGNTPIILTRSIG------NKAIND------YEYRVSDYTLED- 55

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYK-NTTISFDMLEAARMNGVMSLTFFFV 148
            +   + VD + +LAA  G     Q    +  +  N  ++ ++ +A   N +      + 
Sbjct: 56  LINQLNDVDAVVHLAATRG----SQ--GKISEFHDNEILTQNLYDACYENNIS--NIVYA 107

Query: 149 SSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC-------- 200
           S+   Y +   L  +    E     P   YG+ KLA E +   Y++   +          
Sbjct: 108 STISAYSDETSLPWN----EKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHL 163

Query: 201 ---RLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR-EPL 256
                        F R+A        +  +    R   +  +  + V+  +K +      
Sbjct: 164 YGFNEKNNYMINRFFRQAFHGEQ-LTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTF 222

Query: 257 NIGSDEMVSINEMAEIILSFENEKL-PIHPIPGPEG-VRGRNSDDTLINEELGWAPTMKQ 314
           NIGS + ++  E+A  I +    K   +   P     +     D +   E L ++     
Sbjct: 223 NIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNF 282

Query: 315 KDELRITYFWIKE 327
              +   +  ++ 
Sbjct: 283 ATAVEEIHLLMRG 295

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  118 bits (298), Expect = 9e-31
 Identities = 56/319 (17%), Positives = 106/319 (33%), Gaps = 47/319 (14%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMD 88
           G  GFI  ++AR L +     T + +               +E  +   E    DL    
Sbjct: 14  GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVL--ELEERDLS--- 68

Query: 89  NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM----YKNTTISFDMLEAARMNGVMSLT 144
                   V  + +LA+       +    S         N      +L      GV    
Sbjct: 69  -------DVRLVYHLASHKS----VP--RSFKQPLDYLDNVDSGRHLLALCTSVGVP--K 113

Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG 204
               S+  +Y +   L T     E  P  P+  Y   K+  E +   + +        VG
Sbjct: 114 VVVGSTCEVYGQADTLPTP----EDSPLSPRSPYAASKVGLEMVAGAHQRASVAPE--VG 167

Query: 205 --------------EKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS 250
                         +          +T  +   + GDG+Q R  T+I + V+ ++ L   
Sbjct: 168 IVRFFNVYGPGERPDALVPRLCANLLTRNE-LPVEGDGEQRRDFTYITDVVDKLVALANR 226

Query: 251 DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGW-A 309
                +N GS + +S+N++  I+ +           P P  +    +D  L   ++G  +
Sbjct: 227 PLPSVVNFGSGQSLSVNDVIRILQATSPAAEVARKQPRPNEITEFRADTALQTRQIGERS 286

Query: 310 PTMKQKDELRITYFWIKEQ 328
             +  ++ +R+T  W + +
Sbjct: 287 GGIGIEEGIRLTLEWWQSR 305

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  115 bits (290), Expect = 2e-29
 Identities = 64/338 (18%), Positives = 113/338 (33%), Gaps = 62/338 (18%)

Query: 30  GVGGFIPSNIARRLKSERH-----------YSTSIPNALYIIASDWNKNEHMMEDMFCHE 78
           GV GFI SN+   L                +  ++     +++     N          +
Sbjct: 34  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN---------FK 84

Query: 79  FHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSV---IMYKNTTIS--FDMLE 133
           F   D+R +D+C    +GVD + + AA       +    S+   I    T I    +ML 
Sbjct: 85  FIQGDIRNLDDCNNACAGVDYVLHQAALGS----VP--RSINDPITSNATNIDGFLNMLI 138

Query: 134 AARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYT 193
           AAR   V S  F + +S+  Y +   L       E    +P   Y + K   E     ++
Sbjct: 139 AARDAKVQS--FTYAASSSTYGDHPGLPKV----EDTIGKPLSPYAVTKYVNELYADVFS 192

Query: 194 KDFEIEC-------------RLVGEKAP--AAFSRKAVTSTDNFEMWGDGKQTRSLTFID 238
           + +                    G  A     ++   +   D   + GDG+ +R   +I+
Sbjct: 193 RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDD-VYINGDGETSRDFCYIE 251

Query: 239 ECVEGVLRLIKSDFREP---LNIGSDEMVSINEMAEII---LSFENEKLPIHPIPGPE-- 290
             V+  L    +         NI      S+N++   +   L+         P+      
Sbjct: 252 NTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFRE 311

Query: 291 G-VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
           G VR   +D +   + LG+AP       + +   W   
Sbjct: 312 GDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 349

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  114 bits (288), Expect = 2e-29
 Identities = 75/335 (22%), Positives = 127/335 (37%), Gaps = 72/335 (21%)

Query: 33  GFIPSNIARRLKSERH-------YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR 85
           GFI S++  +L    +        S+     +       N +          E H+ DL+
Sbjct: 10  GFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------NPS---------AELHVRDLK 53

Query: 86  VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSV---IMY--KNTTISFDMLEAARMNGV 140
             D         D + + AA        +   S    I++  +N   +F++LE AR  GV
Sbjct: 54  --DYSWGAGIKGDVVFHFAA------NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV 105

Query: 141 MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC 200
              T  F SS+ +Y +   + T     E  P +P   YG  K A E +C  Y + F + C
Sbjct: 106 R--TVVFASSSTVYGDADVIPTP----EEEPYKPISVYGAAKAAGEVMCATYARLFGVRC 159

Query: 201 ---RL-----------VGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLR 246
              R            V       F  K   + +  E+ GDG Q +S  ++ + VE  L 
Sbjct: 160 LAVRYANVVGPRLRHGVIYD----FIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLA 215

Query: 247 LIKSDFR-----EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSD--- 298
             K           LN+G+ + V + ++A+I+      +  I  +P     RG   D   
Sbjct: 216 AWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKY 275

Query: 299 ---D-TLINEELGWAPTMKQKDELRITYFWIKEQV 329
                T + +  GW PTM   + ++ T   + +++
Sbjct: 276 MTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL 310

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  113 bits (285), Expect = 1e-28
 Identities = 54/337 (16%), Positives = 93/337 (27%), Gaps = 58/337 (17%)

Query: 33  GFIPSNIARRL-KSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL 91
           GF+ SN+ +RL +   +    + N L   A   N  +H         F    +       
Sbjct: 42  GFVGSNLVKRLLELGVNQVHVVDNLLS--AEKINVPDH---PAV--RFSETSITDDALLA 94

Query: 92  RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYK---------NTTISFDMLEAAR-MNGVM 141
            +    D + +LA            H               NT  +  + E  +    + 
Sbjct: 95  SLQDEYDYVFHLATY----------HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLK 144

Query: 142 SLTFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIE 199
                + ++ C      F       +            Y + K+  E    +Y K  ++ 
Sbjct: 145 K--VVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLP 202

Query: 200 CRLV--------GEKAPAAFSRKAVTSTD-----NFEMW----------GDGKQTRSLTF 236
                       GE   A   R    +        F               G  TR   F
Sbjct: 203 TVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIF 262

Query: 237 IDECVEGVLRLIKSDFR-EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG--VR 293
           +++   G++            NI S +  SI ++A  I         +  +P        
Sbjct: 263 VEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSG 322

Query: 294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVE 330
            R         ELG++  +   D LR T  W K  + 
Sbjct: 323 KRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLA 359

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score =  112 bits (282), Expect = 2e-28
 Identities = 70/336 (20%), Positives = 133/336 (39%), Gaps = 39/336 (11%)

Query: 20  PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEF 79
              + RI   G  GF+ S++  +L  + H  T + N  +      N  EH +       F
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDN--FFTGRKRNV-EHWIGH---ENF 77

Query: 80  HLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG 139
            L++  V++    +   VD + +LA+          N    +  NT  + +ML  A+  G
Sbjct: 78  ELINHDVVE---PLYIEVDQIYHLAS-PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG 133

Query: 140 VMSLTFFFVSSACIY--PEFKQLDTDVKESEAW----PAEPQDAYGLEKLATEGLCKHYT 193
                    S++ +Y  PE        +  + W    P  P+  Y   K   E +C  Y 
Sbjct: 134 A---RLLLASTSEVYGDPE-----VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 185

Query: 194 KDFEIECRLV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC 240
           K   +E R+                +  + F  +A+       ++G G QTR+  ++ + 
Sbjct: 186 KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEP-LTVYGSGSQTRAFQYVSDL 244

Query: 241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-VRGRNSDD 299
           V G++ L+ S+   P+N+G+ E  +I E A++I +       I  +   +   + R  D 
Sbjct: 245 VNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDI 304

Query: 300 TLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQ 335
                 LGW P +  ++ L     + ++++E +   
Sbjct: 305 KKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 340

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  111 bits (279), Expect = 4e-28
 Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 58/327 (17%)

Query: 33  GFIPSNIARRLKSERH-------YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR 85
           GFI S++  +L SE +        S+     +       N+                DL 
Sbjct: 11  GFIGSHVVDKL-SESNEIVVIDNLSSGNEEFV-------NEA---------ARLVKADLA 53

Query: 86  VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSV---IMY--KNTTISFDMLEAARMNGV 140
             D+      G + + ++AA                       N   ++ +LEA R  GV
Sbjct: 54  A-DDIKDYLKGAEEVWHIAA------NPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGV 106

Query: 141 MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC 200
                 F S++ +Y E K + T     E +P  P   YG  KLA E L + Y   F+++ 
Sbjct: 107 S--RIVFTSTSTVYGEAKVIPTP----EDYPTHPISLYGASKLACEALIESYCHTFDMQA 160

Query: 201 ---RL---VGEKAP----AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS 250
              R    +G ++       F  K   + +  E+ G+G+Q +S  +I +CV+ +L  ++ 
Sbjct: 161 WIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG 220

Query: 251 DFR-EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRG--RNS--DDTLINEE 305
           D R    NIGS++ + +  +AEI+              G  G +G           + + 
Sbjct: 221 DERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKL-KR 279

Query: 306 LGWAPTMKQKDELRITYFWIKEQVEKE 332
           LGW P    ++ +R+    + E +++E
Sbjct: 280 LGWKPRYNSEEAVRMAVRDLVEDLDEE 306

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  110 bits (276), Expect = 8e-28
 Identities = 51/335 (15%), Positives = 119/335 (35%), Gaps = 48/335 (14%)

Query: 29  IGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD 88
            G  G I + +   L  +            +IASD  + +         +F  +D+   D
Sbjct: 5   TGSSGQIGTELVPYLAEKYGKKN-------VIASDIVQRDT-----GGIKFITLDVSNRD 52

Query: 89  NCLRM--TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFF 146
              R      +D + +LA  +   G  + + ++    N   ++++LEAA+ + V      
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILSAKG--EKDPALAYKVNMNGTYNILEAAKQHRVE--KVV 108

Query: 147 FVSSACIY-PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR---- 201
             S+  ++ PE  +              P+  +G+ K+A E L ++Y + F ++ R    
Sbjct: 109 IPSTIGVFGPETPKNKVP----SITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRY 164

Query: 202 --LVGEKAPA---------AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS 250
             ++  KA                AV   + ++ +    +   + ++ + ++ ++ L ++
Sbjct: 165 PGIISYKAEPTAGTTDYAVEIFYYAV-KREKYKCYLAPNRALPMMYMPDALKALVDLYEA 223

Query: 251 D-----FREPLNIGSDEMVSINEMAEIILSFENEKLPIH---PIPGPEGVRGRNSDDTLI 302
           D      R   N+ +    + +E+   I     E    +              + D +  
Sbjct: 224 DRDKLVLRNGYNVTAYT-FTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEA 282

Query: 303 NEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGI 337
           + E G++        +      I E++  E    +
Sbjct: 283 SNEWGFSIEYDLDRTIDDMIDHISEKLGIEGKHAL 317

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  106 bits (268), Expect = 2e-26
 Identities = 48/326 (14%), Positives = 105/326 (32%), Gaps = 49/326 (15%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW----NKNEHMMEDMFCHEFHLVDLR 85
           G  GFI SNI + L  +            I+  D      K  ++++          D  
Sbjct: 53  GGAGFIGSNIVKALNDK--------GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFL 104

Query: 86  VMDNCLRMTSGVDNMSNLAADMGGMGFIQ-SNHSVIMYKNTTISFDMLEAARMNGVMSLT 144
           +          V+ + +  A           +   +M  N   S ++L       +    
Sbjct: 105 IQIMAGEEFGDVEAIFHEGA----CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI---P 157

Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG 204
           F + SSA  Y        +         +P + +G  K   +   +    +   +   VG
Sbjct: 158 FLYASSAATYGGRTSDFIE----SREYEKPLNVFGYSKFLFDEYVRQILPEANSQI--VG 211

Query: 205 EK----------------APAAFSRKAVTSTDNFEMW-GDGKQTRSLTFIDECVEGVLRL 247
            +                + A      + + ++ +++ G     R   ++ +  +  L  
Sbjct: 212 FRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF 271

Query: 248 IKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGR-----NSDDTLI 302
           +++      N+G+    S   +A+  L++ ++K  I  IP P+ ++GR      +D T +
Sbjct: 272 LENGVSGIFNLGTGRAESFQAVADATLAY-HKKGQIEYIPFPDKLKGRYQAFTQADLTNL 330

Query: 303 NEELGWAPTMKQKDELRITYFWIKEQ 328
                  P     + +     W+   
Sbjct: 331 RAAGYDKPFKTVAEGVTEYMAWLNRD 356

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  105 bits (265), Expect = 2e-26
 Identities = 49/326 (15%), Positives = 105/326 (32%), Gaps = 49/326 (15%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW----NKNEHMMEDMFCHEFHLVDLR 85
           G  GFI SNI + L  +            I+  D      K  ++++          D  
Sbjct: 6   GGAGFIGSNIVKALNDK--------GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFL 57

Query: 86  VMDNCLRMTSGVDNMSNLAADMGGMGFIQ-SNHSVIMYKNTTISFDMLEAARMNGVMSLT 144
           +          V+ + +  A           +   +M  N   S ++L       +    
Sbjct: 58  IQIMAGEEFGDVEAIFHEGA----CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI---P 110

Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG 204
           F + SSA  Y        +         +P + YG  K   +   +    +   +   VG
Sbjct: 111 FLYASSAATYGGRTSDFIE----SREYEKPLNVYGYSKFLFDEYVRQILPEANSQI--VG 164

Query: 205 EK----------------APAAFSRKAVTSTDNFEMW-GDGKQTRSLTFIDECVEGVLRL 247
            +                + A      + + ++ +++ G     R   ++ +  +  L  
Sbjct: 165 FRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF 224

Query: 248 IKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGR-----NSDDTLI 302
           +++      N+G+    S   +A+  L++ ++K  I  IP P+ ++GR      +D T +
Sbjct: 225 LENGVSGIFNLGTGRAESFQAVADATLAY-HKKGQIEYIPFPDKLKGRYQAFTQADLTNL 283

Query: 303 NEELGWAPTMKQKDELRITYFWIKEQ 328
                  P     + +     W+   
Sbjct: 284 RAAGYDKPFKTVAEGVTEYMAWLNRD 309

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  104 bits (262), Expect = 1e-25
 Identities = 54/334 (16%), Positives = 109/334 (32%), Gaps = 45/334 (13%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSI-------PNALYIIASDWNKNEHMMEDMFCHEFHLV 82
           G  GF+ SN+A     E H    +        N L+      +         F  E    
Sbjct: 17  GGAGFVGSNLAFHF-QENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75

Query: 83  DLRVMDNCLR-MTSGVDNMSNLAADMGGMGFIQSNHSV-----IMYKNTTISFDMLEAAR 136
           D+    +  R      D + + AA         S+ ++     +M  N     ++LE AR
Sbjct: 76  DINNPLDLRRLEKLHFDYLFHQAA--------VSDTTMLNQELVMKTNYQAFLNLLEIAR 127

Query: 137 MNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF 196
                     + SSA +Y      +T           P++ YG  KL  +     ++ D 
Sbjct: 128 SKKA---KVIYASSAGVYG-----NTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDN 179

Query: 197 EIEC-----------RLVGEKAPAAFS-RKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV 244
                              + A           +    +++  G+Q R   +I++ ++  
Sbjct: 180 VQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQAN 239

Query: 245 LRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG--VRGRNSDDTLI 302
           ++ +K+      N+G  +  S NE+  I+     +    + I  P     +   +     
Sbjct: 240 VKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTY-IKNPYAFFQKHTQAHIEPT 298

Query: 303 NEELGWAPTMKQKDELRITYFWIKEQVEKEKAQG 336
             +L + P    +  ++     I    + ++A+G
Sbjct: 299 ILDLDYTPLYDLESGIKDYLPHIHAIFKGQRAKG 332

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  103 bits (260), Expect = 2e-25
 Identities = 63/340 (18%), Positives = 128/340 (37%), Gaps = 66/340 (19%)

Query: 30  GVGGFIPSNIARRLKSERH-----------YSTSIPNALYIIASDWNKNEHMMEDMFCHE 78
           GV GFI SN+  +L                +  ++     +++++               
Sbjct: 32  GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSR---------FC 82

Query: 79  FHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSV---IMYKNTTIS--FDMLE 133
           F   D+R +  C ++  GVD++ + AA    +G +    S+   I    T I+   ++L 
Sbjct: 83  FIEGDIRDLTTCEQVMKGVDHVLHQAA----LGSVP--RSIVDPITTNATNITGFLNILH 136

Query: 134 AARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYT 193
           AA+   V S T+   +S+  Y +       + + E     P   Y + K   E   + Y 
Sbjct: 137 AAKNAQVQSFTYA--ASSSTYGD----HPALPKVEENIGNPLSPYAVTKYVNEIYAQVYA 190

Query: 194 KDFEIECRLVG-------------EKAPAA----FSRKAVTSTDNFEMWGDGKQTRSLTF 236
           + +  +   +G               A AA    ++   +   D+  + GDG+ +R   +
Sbjct: 191 RTYGFKT--IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-DDVYINGDGETSRDFCY 247

Query: 237 IDECVEGVLRLIKSDFREP---LNIGSDEMVSINEMAEII---LSFENEKLPIHPIPGPE 290
           ID  ++  +    +         N+   +  ++NE++  I   L+  +    +       
Sbjct: 248 IDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREF 307

Query: 291 --G-VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
             G VR   +D T   + L + P +K ++ LR++  W   
Sbjct: 308 RSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVR 347

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 93.1 bits (232), Expect = 1e-21
 Identities = 49/320 (15%), Positives = 110/320 (34%), Gaps = 39/320 (12%)

Query: 29  IGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK-NEHMMEDMFCHEFHLVDLRVM 87
           IG  G I + + ++L+              +IASD  K N  ++        + +D   +
Sbjct: 8   IGACGQIGTELTQKLRKLYGTEN-------VIASDIRKLNTDVVNSGPFEVVNALDFNQI 60

Query: 88  DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
           ++ +     + ++  +AA +      + N +     N    F +L  A+   +     F+
Sbjct: 61  EHLVE-VHKITDIYLMAALLSATA--EKNPAFAWDLNMNSLFHVLNLAKAKKIKK--IFW 115

Query: 148 VSSACIY-PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR----- 201
            SS  ++ P   + +T     +    EP   YG+ K A E  C++Y   + ++ R     
Sbjct: 116 PSSIAVFGPTTPKENTP----QYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYP 171

Query: 202 -LVGEKAP--------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD- 251
            L+    P        A        +   +E +   +    + ++D+ ++  + ++K+  
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231

Query: 252 ----FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE--GVRGRNSDDTLINEE 305
                    N+ +          EI        +   P    +       + DD+   E+
Sbjct: 232 EKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQARED 291

Query: 306 LGWAPTMKQKDELRITYFWI 325
             W  T   +   +     +
Sbjct: 292 WDWKHTFDLESMTKDMIEHL 311

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 89.0 bits (221), Expect = 4e-20
 Identities = 63/360 (17%), Positives = 117/360 (32%), Gaps = 68/360 (18%)

Query: 24  LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD--WNKNEHMMEDMFCHEFHL 81
           +R+  +GV GFI +++  RL  E HY         +   D   +     +       FH 
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYE--------VYGLDIGSDAISRFLNH---PHFHF 49

Query: 82  VDLRVMDNCLRM---TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN 138
           V+  +  +   +       D +  L A +        N   +   +   +  ++      
Sbjct: 50  VEGDISIHSEWIEYHVKKCDVVLPLVA-IATPIEYTRNPLRVFELDFEENLRIIRYCVKY 108

Query: 139 GVMSLTFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDA-YGLEKLATEGLCKHYTKD 195
                   F S++ +Y     K  D D       P       Y + K   + +   Y + 
Sbjct: 109 RK---RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 165

Query: 196 FEIECRLV-----------GEKAPAAFSRKAVTSTDNF----------EMWGDGKQTRSL 234
             ++  L               A    S +A+T               ++   GKQ R  
Sbjct: 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAIT---QLILNLVEGSPIKLIDGGKQKRCF 222

Query: 235 TFIDECVEGVLRLIKSDFR----EPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIPGP 289
           T I + +E + R+I++       E +NIG+ +   SI E+ E++L+   +    H  P  
Sbjct: 223 TDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPF 282

Query: 290 EGVRGRNS--------DD--------TLINEELGWAPTMKQKDELRITYFWIKEQVEKEK 333
            G R   S         D           +  L W P +  ++ +  T  +    V+   
Sbjct: 283 AGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTD 342

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 62/276 (22%), Positives = 108/276 (39%), Gaps = 62/276 (22%)

Query: 104 AADMGGMGFIQSNHSV---IMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEF-KQ 159
           AA +GG   I +N++     +Y+N  I  +++ AA  N V  L F    S+CIYP+  KQ
Sbjct: 63  AAKVGG---IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFL--GSSCIYPKLAKQ 117

Query: 160 LDTDVKESE--AWPAEP-QDAYGLEKLATEGLCKHYTKDFEIE------CRLVGEK---- 206
               + ESE      EP  + Y + K+A   LC+ Y + +  +        L G      
Sbjct: 118 ---PMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFH 174

Query: 207 -----APAAFSRKA----VTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR---- 253
                   A  R+          +  +WG G   R    +D+     + +++        
Sbjct: 175 PSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLE 234

Query: 254 ------EPLNIGSDEMVSINEMAEII---------LSFENEKLPIHPIPGPEGVRGRNSD 298
                   +N+G+    +I E+A+ I         + F+  K        P+G   +  D
Sbjct: 235 NTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK--------PDGTPRKLLD 286

Query: 299 DTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKA 334
            T ++ +LGW   +  +  L  TY W  E  ++ + 
Sbjct: 287 VTRLH-QLGWYHEISLEAGLASTYQWFLENQDRFRG 321

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 86.5 bits (215), Expect = 2e-19
 Identities = 50/345 (14%), Positives = 101/345 (29%), Gaps = 57/345 (16%)

Query: 9   TYDKLERESHWPSGKLRISSI---GVGGFIPSNIARRLKSERH-------YSTSIPNALY 58
           ++      S        +  +   G+ G I S+IA  L            ++T     L 
Sbjct: 4   SHHHHHHSSGLVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL- 62

Query: 59  IIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGV--DNMSNLAADMGGMGFIQSN 116
                 + N           F    +       ++   +  D + + AA         ++
Sbjct: 63  ----KDHPN---------LTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYND 109

Query: 117 HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQD 176
                  N     ++++AA+ N V    +F  ++ C   +  Q           P  P +
Sbjct: 110 TLT----NCVGGSNVVQAAKKNNVGRFVYF-QTALCYGVKPIQQPV----RLDHPRNPAN 160

Query: 177 A-YGLEKLATEGLCKHYTKDFEIEC---RL--V----GEKAPAA-FSRKAVTSTDNFEMW 225
           + Y + K A E     Y +   ++    RL  V        P   F ++       F   
Sbjct: 161 SSYAISKSANE----DYLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCF--- 213

Query: 226 GDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP 285
              K  R   F+ +     +R +        +  S   V+I E+ + ++          P
Sbjct: 214 -VTKARRDFVFVKDLARATVRAVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEP 272

Query: 286 IPGPEG---VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
                G         D +   ++ G       K+ +     + +E
Sbjct: 273 EIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFRE 317

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 85.6 bits (212), Expect = 9e-19
 Identities = 55/362 (15%), Positives = 119/362 (32%), Gaps = 73/362 (20%)

Query: 25  RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL 84
           ++  +GV GFI  ++++R+     +     + +       ++   +++       H  + 
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMD-MQT-----DRLGDLVKH---ERMHFFEG 76

Query: 85  RVMDNCLRM---TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM 141
            +  N   +       D +  L A +            +   +   +  ++ +A   G  
Sbjct: 77  DITINKEWVEYHVKKCDVILPLVA-IATPATYVKQPLRVFELDFEANLPIVRSAVKYGK- 134

Query: 142 SLTFFFVSSACIY-----PEFK-QLDTDVKESEAW-PAEPQDA-YGLEKLATEGLCKHYT 193
                F S++ +Y      +F          +  + P       Y   K   + +   Y 
Sbjct: 135 --HLVFPSTSEVYGMCADEQFDPD-----ASALTYGPINKPRWIYACSKQLMDRVIWGYG 187

Query: 194 K---DFEIE-------CRLVGEKAPAAFSRKAVTSTDNF----------EMWGDGKQTRS 233
               +F +          L     P   S + VT    F           +   G Q R+
Sbjct: 188 MEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVT---QFLGHIVRGENISLVDGGSQKRA 244

Query: 234 LTFIDECVEGVLRLIKSDFR----EPLNIGS-DEMVSINEMAEIILS-------FENEKL 281
            T++D+ +  ++++I++       +  NIG+ +   S+ E+A  +L        + +   
Sbjct: 245 FTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAK 304

Query: 282 PIHPIPGPEGV-RGRNSDD--------TLINEELGWAPTMKQKDELRITYFWIKEQVEKE 332
            +  +    G   G    D            +ELGWAP     D LR  +   +  V   
Sbjct: 305 RVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADA 364

Query: 333 KA 334
           +A
Sbjct: 365 RA 366

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 41/235 (17%), Positives = 65/235 (27%), Gaps = 55/235 (23%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  G + S I   L +  H                 +           E    DL     
Sbjct: 9   GAAGGVGSAIRPHLGTLAHEVRLSDIV----DLGAAEAHE--------EIVACDLADAQA 56

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYK--NTTISFDMLEAARMNGVMSLTFFF 147
              +    D + +L         +            N   ++++ EAAR  G       F
Sbjct: 57  VHDLVKDCDGIIHLGG-------VSVERPWNDILQANIIGAYNLYEAARNLGKP--RIVF 107

Query: 148 VSSACIY---PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC---R 201
            SS       P   ++DT+V      P  P   YGL K   E L   Y   F+IE    R
Sbjct: 108 ASSNHTIGYYPRTTRIDTEV------PRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIR 161

Query: 202 L----------------VGEKAPAAFSRKAVTSTDNFE--MWGDGKQTRSLTFID 238
           +                +         ++A  +       ++G    T   ++ D
Sbjct: 162 IGSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTE--SWWD 214

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 70.5 bits (173), Expect = 5e-14
 Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 28/174 (16%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  G +   +  RL +             +  +D +  +    +    E    DL   + 
Sbjct: 10  GAAGQLGRVMRERL-APMAEI--------LRLADLSPLDPAGPN---EECVQCDLADANA 57

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS 149
              M +G D + +L         ++     I+  N    +++ EAAR +G       F S
Sbjct: 58  VNAMVAGCDGIVHLGGIS-----VEKPFEQILQGNIIGLYNLYEAARAHGQP--RIVFAS 110

Query: 150 SACIY---PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC 200
           S       P+ ++L          PA P   YG+ K   E L + Y   F  E 
Sbjct: 111 SNHTIGYYPQTERLG------PDVPARPDGLYGVSKCFGENLARMYFDKFGQET 158

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 41/312 (13%), Positives = 83/312 (26%), Gaps = 40/312 (12%)

Query: 29  IGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD 88
           IG  G +   + +RL  +                D  + E         +    DL    
Sbjct: 20  IGAAGMVGRKLTQRLVKDGSLGGKPVEK--FTLIDVFQPEAPAGFSGAVDARAADLSAPG 77

Query: 89  NCLR-MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLT--- 144
              + + +  D + +LAA + G    + +       N   +  + +A R+          
Sbjct: 78  EAEKLVEARPDVIFHLAAIVSGEA--ELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPR 135

Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR--- 201
             F SS  ++             + +   P  +YG +K   E L   Y++    +     
Sbjct: 136 VVFTSSIAVFGAPLPYPIP----DEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIR 191

Query: 202 ---LVGEKAPAA---------FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK 249
              +                   R+ +   +   +                V  ++    
Sbjct: 192 LPTICIRPGKPNAAASGFFSNILREPLVGQE-AVLPVPESIRHWHASPRSAVGFLIHGAM 250

Query: 250 SD-----FREPLNIGSDEMVSINEMAEIILSF--ENEKLPIHPIPGPEGVRGRNSD---- 298
            D      R  L++      ++ E  E +     E     I   P    +R         
Sbjct: 251 IDVEKVGPRRNLSMPGLS-ATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGF 309

Query: 299 DTLINEELGWAP 310
           +     ELG+  
Sbjct: 310 EAKRARELGFTA 321

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 68/361 (18%), Positives = 119/361 (32%), Gaps = 66/361 (18%)

Query: 23  KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHL 81
           + R+  +GV GFI +++  RL  E HY         +   D   +   +     H  FH 
Sbjct: 315 RTRVLILGVNGFIGNHLTERLLREDHYE--------VYGLDIGSDA--ISRFLNHPHFHF 364

Query: 82  VDLRVMDNCLRMTSGV---DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN 138
           V+  +  +   +   V   D +  L A       I +              D  E  R+ 
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVA-------IATPIEYTRNPLRVFELDFEENLRII 417

Query: 139 GVMSL---TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQD-AYGLEKLATEGLCKHY 192
                      F S++ +Y     K  D D       P       Y + K   + +   Y
Sbjct: 418 RYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 477

Query: 193 TKDFEIECRLV-----------GEKAPAAFSRKAVT-------STDNFEMWGDGKQTRSL 234
            +   ++  L               A    S +A+T            ++   GKQ R  
Sbjct: 478 GEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCF 537

Query: 235 TFIDECVEGVLRLIKSDFR----EPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIPGP 289
           T I + +E + R+I++       E +NIG+ +   SI E+ E++L+   +    H  P  
Sbjct: 538 TDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPF 597

Query: 290 EGVR--------GRNSDD--------TLINEELGWAPTMKQKDELRITYFWIKEQVEKEK 333
            G R        G+   D           +  L W P +  ++ +  T  +    V+   
Sbjct: 598 AGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTD 657

Query: 334 A 334
            
Sbjct: 658 K 658

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 59.2 bits (143), Expect = 6e-10
 Identities = 39/300 (13%), Positives = 82/300 (27%), Gaps = 75/300 (25%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GF+  N+   L S   +        +I        E  +E                 
Sbjct: 7   GAKGFVGKNLKADLTSTTDH--------HIFEVHRQTKEEELESAL-------------- 44

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQS--NHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
                   D + +LA        +    +       N +    +L+    N         
Sbjct: 45  -----LKADFIVHLAG-------VNRPEHDKEFSLGNVSYLDHVLDILTRNTK--KPAIL 90

Query: 148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV---- 203
           +SS+                        + YG  KL  E L + Y +++     +     
Sbjct: 91  LSSSIQA------------------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPN 132

Query: 204 --GEKAPAAFSRKAVTSTDNFEM-----WGDGKQTRSLTFIDECVEGVLRLIKSDFR--- 253
             G+     ++    T              D     +L ++D+ V  + R I+       
Sbjct: 133 LFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIEN 192

Query: 254 EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMK 313
               + +   V++ E+ +++  F+  +L                +  L +  L + P+  
Sbjct: 193 GVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLF-----EKDLYSTYLSYLPSTD 247

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 57.9 bits (141), Expect = 1e-09
 Identities = 45/236 (19%), Positives = 74/236 (31%), Gaps = 47/236 (19%)

Query: 124 NTTISFDMLEAARMNGVMSLTFFFVSSAC-IYPEFKQLDTDVKESEAWPAEPQDAYGLEK 182
           N     ++LEA R  GV      F S+   IY E  +     +  E WP  P+  Y   K
Sbjct: 93  NLLGGLNLLEACRQYGVEK--LVFASTGGAIYGEVPE---GERAEETWPPRPKSPYAASK 147

Query: 183 LATEGLCKHYTKDFEIEC---R----------------LVGEKAPAAFSRKAVT--STDN 221
            A E     Y + + ++    R                +V   A        VT  +   
Sbjct: 148 AAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKT 207

Query: 222 FEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKL 281
               GD    R   ++ +  E     + S      N+G+ E  +  E+   +      + 
Sbjct: 208 P---GDEGCVRDYVYVGDVAEAHALALFSL-EGIYNVGTGEGHTTREVLMAV-----AEA 258

Query: 282 ---PIHPIPGPEGVRG---RNS--DDTLINEELGWAPTMKQKDELRITYFWIKEQV 329
                   P P   R      S      +    GW P +  ++ +R+T    +  V
Sbjct: 259 AGKAPEVQPAPP--RPGDLERSVLSPLKL-MAHGWRPKVGFQEGIRLTVDHFRGAV 311

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 56.0 bits (136), Expect = 5e-09
 Identities = 47/332 (14%), Positives = 92/332 (27%), Gaps = 81/332 (24%)

Query: 33  GFIPSNIARRLKSERH-------YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR 85
           G + SN+      + H       ++T     L  +A                      + 
Sbjct: 30  GCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAG--------------LSVIEGSVT 75

Query: 86  ---VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMY--KNTTISFDMLEAARMNGV 140
              +++     +    ++ + AA        +           N   S ++ +AA   GV
Sbjct: 76  DAGLLERAFD-SFKPTHVVHSAA------AYKDPDDWAEDAATNVQGSINVAKAASKAGV 128

Query: 141 MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC 200
             L  F   +A  Y     +          P  P  +YG+ K A E     +    ++  
Sbjct: 129 KRLLNF--QTALCYGRPATVPIP----IDSPTAPFTSYGISKTAGE----AFLMMSDVPV 178

Query: 201 ---R---------LVGEKAP---AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG-V 244
              R          +G          + +    +D           R    + + +    
Sbjct: 179 VSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSD---------TVRDFLDMSDFLAIAD 229

Query: 245 LRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDD----- 299
           L L +       N+ + E  SI E+ +++            +  P  V    +DD     
Sbjct: 230 LSLQEGRPTGVFNVSTGEGHSIKEVFDVV-----LDYVGATLAEPVPVVAPGADDVPSVV 284

Query: 300 ---TLINEELGWAPTMKQKDELRITYFWIKEQ 328
              +    E GW   +  KD +     W  + 
Sbjct: 285 LDPSKTETEFGWKAKVDFKDTITGQLAWYDKY 316

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 41/257 (15%), Positives = 73/257 (28%), Gaps = 48/257 (18%)

Query: 124 NTTISFDMLEAARMNGVMSLTFFFVSSACIY--PEFKQL-------DTDVKESEAWPAEP 174
           N   + ++L A +  G        + +   Y  P                 ++  +P + 
Sbjct: 130 NVIGTLNVLFAIKEFGE-ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQA 188

Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLV------GEKA-PAAFSRKAVTSTDNFEMW-- 225
              Y L K+          K + I    +      G K        +     D   ++  
Sbjct: 189 SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 248

Query: 226 ------------------GDGKQTRSLTFIDECVEGVLRLIKSDFR--EPLNI-GSDEMV 264
                             G G QTR    I + V+ V   I +  +  E        E  
Sbjct: 249 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQF 308

Query: 265 SINEMAEII-----LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELR 319
           S+NE+A ++         + K    P P  E      +       ELG  P       L 
Sbjct: 309 SVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLD 368

Query: 320 ITYFWI---KEQVEKEK 333
               +    K++V+ ++
Sbjct: 369 SLLNFAVQFKDRVDTKQ 385

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 7e-07
 Identities = 50/371 (13%), Positives = 106/371 (28%), Gaps = 141/371 (38%)

Query: 10  YDKLERESHWPSGKLR--ISSI-----GVGGFIPSNIARRLKSERHYSTSIPNALYIIAS 62
              ++ E   PS   R  I            F   N++R     + Y   +  AL  +  
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR----LQPY-LKLRQALLELRP 149

Query: 63  DWN----------K--------NEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLA 104
             N          K          + ++     +   ++L+   NC    + ++ +  L 
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK---NCNSPETVLEMLQKLL 206

Query: 105 ADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ----L 160
             +      +S+HS     N  +    ++A        L     S       ++     L
Sbjct: 207 YQIDPNWTSRSDHS----SNIKLRIHSIQAE-------LRRLLKS-----KPYENCLLVL 250

Query: 161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTD 220
             +V+ ++AW                         F + C+++            +T+  
Sbjct: 251 L-NVQNAKAW-----------------------NAFNLSCKIL------------LTTRF 274

Query: 221 NFEMWGDGKQTRSLT-FIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENE 279
                      + +T F+       + L        L    DE+ S+  + +  L    +
Sbjct: 275 -----------KQVTDFLSAATTTHISLD--HHSMTLT--PDEVKSL--LLK-YLDCRPQ 316

Query: 280 KLP-----IHP--IPGPEGVRGRNSDDTLINEELGWAPTMKQKDEL-RITYFWIKEQVEK 331
            LP      +P  +             ++I E +        +D L     +   + V  
Sbjct: 317 DLPREVLTTNPRRL-------------SIIAESI--------RDGLATWDNW---KHVNC 352

Query: 332 EK-AQGIDLSI 341
           +K    I+ S+
Sbjct: 353 DKLTTIIESSL 363

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 3e-06
 Identities = 51/377 (13%), Positives = 107/377 (28%), Gaps = 109/377 (28%)

Query: 14  ERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD-WNKNEHMME 72
            R  H  + KLRI SI           RRL   + Y     N L ++  +  N  +    
Sbjct: 215 SRSDHSSNIKLRIHSI-------QAELRRLLKSKPY----ENCL-LVLLNVQNA-KAW-- 259

Query: 73  DMFCHEFH---LV---DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTT 126
           + F        L+     +V D            ++++ D   M         ++ K   
Sbjct: 260 NAF--NLSCKILLTTRFKQVTD-----FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 127 ISFDML--EAARMNG-VMSLTFFFVSS-ACIYPEFKQLDTD-----VKESEAWPAEPQDA 177
                L  E    N   +S+    +      +  +K ++ D     ++ S          
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS---------- 362

Query: 178 YGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEM-WGDGKQTRSLTF 236
             L  L      K +     +            F   A   T    + W D  ++  +  
Sbjct: 363 --LNVLEPAEYRKMF-DRLSV------------FPPSAHIPTILLSLIWFDVIKSDVMVV 407

Query: 237 IDECVEGVLRLIKSDFREPL----NIGSDEMVSINEMAE----------IILSFENEKLP 282
           +++  +    L++   +E      +I  +  V +               I  +F+++ L 
Sbjct: 408 VNKLHK--YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465

Query: 283 IHPIPGPEGVRGRNSDDTLINEELGW---APTMKQK-DELRITYF---WIKEQVEKE--- 332
                           D      +G         ++    R+ +    ++++++  +   
Sbjct: 466 P------------PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513

Query: 333 -KAQG------IDLSIY 342
             A G        L  Y
Sbjct: 514 WNASGSILNTLQQLKFY 530

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	366
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.98
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.98
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.95
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.94
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.91
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.9
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.89
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.88
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.88
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.87
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.87
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.87
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.86
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.86
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.86
1spx_A	278	Short-chain reductase family member (5L265); paral	99.86
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.86
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.86
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.86
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.86
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.86
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.86
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.86
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.86
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.85
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.85
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.85
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.85
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.85
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.85
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.85
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.85
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.85
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.85
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.85
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.85
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.85
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.84
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.84
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.84
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.84
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.84
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.84
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.84
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.84
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.84
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.84
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.84
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.84
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.84
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.84
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.84
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.84
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.84
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.84
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.84
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.84
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.83
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.83
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.83
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.83
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.83
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.83
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.83
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.83
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.83
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.83
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.83
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.83
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.83
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.83
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.83
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.83
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.83
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.83
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.83
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.83
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.83
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.83
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.83
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.83
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.82
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.82
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.82
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.82
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.82
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.82
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.82
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.82
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.82
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.82
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.82
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.82
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.82
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.82
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.82
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.82
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.82
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.82
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.81
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.81
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.81
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.81
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.81
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.81
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.81
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.81
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.81
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.81
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.81
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.81
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.81
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.81
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.81
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.81
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.81
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.81
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.81
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.81
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.81
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.81
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.8
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.8
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.8
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.8
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.8
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.8
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.8
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.8
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.8
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.8
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.8
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.8
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.79
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.79
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.79
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.79
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.79
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.79
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.79
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.79
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.79
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.78
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.78
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.78
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.78
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.78
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.78
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.78
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.78
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.78
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.78
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.78
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.78
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.78
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.78
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.78
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.78
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.78
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.77
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.77
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.77
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.77
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.77
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.77
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.77
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.77
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.77
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.77
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.77
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.76
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.76
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.76
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.75
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.75
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.75
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.75
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.75
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.74
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.74
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.74
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.74
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.74
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.73
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.73
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.72
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.72
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.72
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.71
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.71
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.7
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.69
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.69
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.68
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.68
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.68
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.68
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.68
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.67
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.66
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.66
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.65
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.65
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.65
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.64
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.55
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.52
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.51
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.48
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.48
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.47
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.45
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.31
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.29
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.29
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.28
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.24
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.18
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.17
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.11
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.07
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.05
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.05
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.04
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.85
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.85
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.78
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.77
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.71
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.61
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.57
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.55
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.53
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.51
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.48
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.46
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.44
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.4
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.35
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.32
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.32
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.28
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.24
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.19
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.08
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.08
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.03
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.03
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.91
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.9
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.84
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.82
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.78
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.78
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.74
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.73
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.67
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.65
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.63
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.59
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.58
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.58
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.57
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.56
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.56
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.54
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.51
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.5
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.5
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.47
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.47
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.44
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.43
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.42
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.41
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.41
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.41
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.4
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.38
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.38
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.35
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.33
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.33
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.3
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.3
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.29
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.29
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.27
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.27
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.25
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.23
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.23
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.22
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.22
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.2
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.2
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.19
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.18
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.17
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.17
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.16
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.14
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.14
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.14
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.13
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.12
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.12
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.12
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.12
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.11
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.1
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.08
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.07
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.06
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.06
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.05
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.04
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.04
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.03
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.01
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.98
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.97
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.97
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.97
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.96
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.94
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.94
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.93
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.93
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.92
1lnq_A	336	MTHK channels, potassium channel related protein;	96.9
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.88
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.87
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.86
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.84
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.81
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.81
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.79
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.78
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.74
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.72
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.71
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.7
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.7
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.7
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.7
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.67
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.67
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.66
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.64
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.63
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.63
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.62
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.61
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.61
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.59
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.59
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.57
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.57
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.57
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.57
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.57
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.56
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.54
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.54
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.54
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	96.54
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.52
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.5
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.49
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.48
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.46
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.45
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.45
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.43
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.42
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.41
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.39
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.38
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.38
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.38
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.37
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.37
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.34
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.33
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.31
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.3
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.3
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.28
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.28
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.28
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.27
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.25
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.25
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.24
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.23
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.21
2duw_A	145	Putative COA-binding protein; ligand binding prote	96.21
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.2
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.19
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	96.18
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.17
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	96.17
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	96.16
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.14
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.13
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.13

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=9.2e-50  Score=377.13  Aligned_cols=353  Identities=76%  Similarity=1.236  Sum_probs=291.7

Q ss_pred             cccCcccccccccCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEc
Q 044498            3 TSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLV   82 (366)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~   82 (366)
                      +-|....++.+.+...|..+||+|||||||||||++|+++|+++|++         |++++|...........+++++.+
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~v~~~~~   79 (379)
T 2c5a_A            9 TDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIASDWKKNEHMTEDMFCDEFHLV   79 (379)
T ss_dssp             ------CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCCSSSCGGGTCSEEEEC
T ss_pred             cchhhhhHHHHhccccccccCCeEEEECCccHHHHHHHHHHHHCCCe---------EEEEECCCccchhhccCCceEEEC
Confidence            34555666777777777778899999999999999999999999999         999999876543333346789999


Q ss_pred             cCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCC-
Q 044498           83 DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD-  161 (366)
Q Consensus        83 D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~-  161 (366)
                      |++|.+.+.++++++|+|||+|+..........++...+++|+.++.++++++++.+++  ||||+||.++|+.....+ 
T Consensus        80 Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~--~~V~~SS~~v~~~~~~~~~  157 (379)
T 2c5a_A           80 DLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIK--RFFYASSACIYPEFKQLET  157 (379)
T ss_dssp             CTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEGGGSCGGGSSSS
T ss_pred             CCCCHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEeehheeCCCCCCCc
Confidence            99999999999999999999999754211224567778999999999999999999999  999999999998653311 


Q ss_pred             --CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEE
Q 044498          162 --TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEM  224 (366)
Q Consensus       162 --~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i  224 (366)
                        .++.|++..+..|.+.|+.+|+++|.+++.++.+++++++++|+.               .+..++..+..+...+.+
T Consensus       158 ~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (379)
T 2c5a_A          158 TNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM  237 (379)
T ss_dssp             SSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEE
T ss_pred             cCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEE
Confidence              113555434567889999999999999999988889999999632               245566666663333778


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHHHH
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINE  304 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~~~  304 (366)
                      ++++.+.++|+|++|+|++++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+.++...|.+........|++|+++
T Consensus       238 ~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~d~~k~~~  317 (379)
T 2c5a_A          238 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKE  317 (379)
T ss_dssp             ESCSCCEECCEEHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHH
T ss_pred             eCCCCeeEEEEEHHHHHHHHHHHhhccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCCCcccccCCHHHHHH
Confidence            88888999999999999999999988778999999999999999999999999988776666655555566789999999


Q ss_pred             HcCCCCCCCHHHHHHHHHHHHHHHHHHhhhcCCceeeecccccccccCccccCCCCccccCC
Q 044498          305 ELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPVQLGSPCAEDDKE  366 (366)
Q Consensus       305 ~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (366)
                      +|||.|+++++++|+++++||+++.......+....+|..+.+|+++++|++||.-|+|.||
T Consensus       318 ~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (379)
T 2c5a_A          318 KLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADGKE  379 (379)
T ss_dssp             HHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCSCC--
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHhHhhhhhccCchhhcchhhhhhccCceeccccccccCCC
Confidence            99999999999999999999999998888888777789999999999999999999999986

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.8e-44  Score=329.63  Aligned_cols=285  Identities=18%  Similarity=0.255  Sum_probs=243.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ||+|||||||||||++|+++|+++|++         |++++|.+.... .  .+++++.+|++ .+.+.++++++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~-~--~~~~~~~~Dl~-~~~~~~~~~~~d~Vih   68 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNT---------PIILTRSIGNKA-I--NDYEYRVSDYT-LEDLINQLNDVDAVVH   68 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCE---------EEEEeCCCCccc-C--CceEEEEcccc-HHHHHHhhcCCCEEEE
Confidence            589999999999999999999999999         999999843322 2  26799999999 9999999999999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+....     .++...++.|+.++.++++++++.+++  ||||+||.++||.....+.  .|+.  +..|.+.|+.+|
T Consensus        69 ~a~~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~--r~v~~SS~~vyg~~~~~~~--~E~~--~~~p~~~Y~~sK  137 (311)
T 3m2p_A           69 LAATRGS-----QGKISEFHDNEILTQNLYDACYENNIS--NIVYASTISAYSDETSLPW--NEKE--LPLPDLMYGVSK  137 (311)
T ss_dssp             CCCCCCS-----SSCGGGTHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGCCCGGGCSB--CTTS--CCCCSSHHHHHH
T ss_pred             ccccCCC-----CChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEccHHHhCCCCCCCC--CCCC--CCCCCchhHHHH
Confidence            9997642     177788999999999999999999999  9999999999998765543  5554  788999999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      +++|++++.++.+.+++++++|+.           .+..++..+.. +.++.+++++++.++++|++|+|+++..+++++
T Consensus       138 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          138 LACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFH-GEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHT-CCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHc-CCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            999999999999899999999642           34556666665 788888888999999999999999999999887


Q ss_pred             -CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCC--CCCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Q 044498          252 -FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG--PEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       252 -~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  328 (366)
                       .+++||+++++.+|+.|+++.+.+.+|.+..+...+.  +.......+|++|++++|||.|+++++++|+++++|++++
T Consensus       217 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  296 (311)
T 3m2p_A          217 KVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGL  296 (311)
T ss_dssp             TCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-
T ss_pred             CCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhc
Confidence             7899999999999999999999999999877666654  2345567899999999999999999999999999999987


Q ss_pred             HHHh
Q 044498          329 VEKE  332 (366)
Q Consensus       329 ~~~~  332 (366)
                      ....
T Consensus       297 ~~~~  300 (311)
T 3m2p_A          297 DDVP  300 (311)
T ss_dssp             ----
T ss_pred             ccCc
Confidence            5443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=1.3e-44  Score=338.27  Aligned_cols=293  Identities=20%  Similarity=0.233  Sum_probs=246.1

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-----------cccceEEEccCCChh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-----------MFCHEFHLVDLRVMD   88 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-----------~~~v~~~~~D~~~~~   88 (366)
                      +.++|+|||||||||||++|+++|+++|++         |++++|.........           ..+++++.+|++|.+
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   92 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQV---------VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLT   92 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHH
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHH
Confidence            346789999999999999999999999999         999999765322110           046799999999999


Q ss_pred             HHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      .+.++++++|+|||+|+.... .....++...+++|+.++.++++++++.+++  ||||+||.++||.....+.  .|+.
T Consensus        93 ~~~~~~~~~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~--~~v~~SS~~vyg~~~~~~~--~E~~  167 (351)
T 3ruf_A           93 TCEQVMKGVDHVLHQAALGSV-PRSIVDPITTNATNITGFLNILHAAKNAQVQ--SFTYAASSSTYGDHPALPK--VEEN  167 (351)
T ss_dssp             HHHHHTTTCSEEEECCCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS--EEEEEEEGGGGTTCCCSSB--CTTC
T ss_pred             HHHHHhcCCCEEEECCccCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEecHHhcCCCCCCCC--ccCC
Confidence            999999999999999996532 2344567778999999999999999999999  9999999999998776543  5554


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC---------------CcHHHHHHHHHhCCCCeEEecCCcceee
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE---------------KAPAAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~---------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                        +..|.+.|+.+|+++|++++.++.+++++++++|+               ..+..++..+.. +.++.+++++.+.++
T Consensus       168 --~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~  244 (351)
T 3ruf_A          168 --IGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLK-GDDVYINGDGETSRD  244 (351)
T ss_dssp             --CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEEC
T ss_pred             --CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHc-CCCcEEeCCCCeEEe
Confidence              77899999999999999999999989999999963               234566777776 677888899999999


Q ss_pred             eeeHHHHHHHHHHHHhc---CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC-----cCCC-CCCCcccccChHHHHH
Q 044498          234 LTFIDECVEGVLRLIKS---DFREPLNIGSDEMVSINEMAEIILSFENEKLPIH-----PIPG-PEGVRGRNSDDTLINE  304 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~---~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-----~~~~-~~~~~~~~~~~~k~~~  304 (366)
                      |+|++|+|++++.++..   ..+++||+++++.+|+.|+++.+.+.+|.+..+.     ..+. +.......+|++|+++
T Consensus       245 ~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  324 (351)
T 3ruf_A          245 FCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAID  324 (351)
T ss_dssp             CEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHH
T ss_pred             eEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHH
Confidence            99999999999999876   2688999999999999999999999999843221     2221 2334556899999999


Q ss_pred             HcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          305 ELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       305 ~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      +|||.|+++++++|+++++||+++.
T Consensus       325 ~lG~~p~~~~~~~l~~~~~~~~~~~  349 (351)
T 3ruf_A          325 LLKYRPNIKIREGLRLSMPWYVRFL  349 (351)
T ss_dssp             HHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=7.7e-44  Score=332.32  Aligned_cols=297  Identities=18%  Similarity=0.215  Sum_probs=240.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .+||+|||||||||||++|+++|+++|  ++         |++++|........      ...+++++.+|++|.+.+.+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~---------v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~   92 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYK---------IINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEH   92 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEE---------EEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcE---------EEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHH
Confidence            467899999999999999999999999  55         77887764221111      12467999999999999999


Q ss_pred             hhcC--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           93 MTSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        93 ~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      ++++  +|+|||+|+.... .....++...+++|+.++.++++++++.+++  ||||+||.++||...... ++.|+.  
T Consensus        93 ~~~~~~~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~--~~v~~SS~~vy~~~~~~~-~~~E~~--  166 (346)
T 4egb_A           93 VIKERDVQVIVNFAAESHV-DRSIENPIPFYDTNVIGTVTLLELVKKYPHI--KLVQVSTDEVYGSLGKTG-RFTEET--  166 (346)
T ss_dssp             HHHHHTCCEEEECCCCC----------CHHHHHHTHHHHHHHHHHHHSTTS--EEEEEEEGGGGCCCCSSC-CBCTTS--
T ss_pred             HHhhcCCCEEEECCcccch-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEeCchHHhCCCCcCC-CcCCCC--
Confidence            9986  9999999997642 2344667788999999999999999999999  999999999999874321 135554  


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                      +..|.+.|+.+|+++|.++..++.+++++++++|+.           .+..++..+.. +.++.+++++.+.++|+|++|
T Consensus       167 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D  245 (346)
T 4egb_A          167 PLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALE-GKKLPLYGDGLNVRDWLHVTD  245 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHT-TCCCEEETTSCCEECEEEHHH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHc-CCCceeeCCCCeEEeeEEHHH
Confidence            788999999999999999999999899999999632           34556666666 677888899999999999999


Q ss_pred             HHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC-CCcCCCC-CCCcccccChHHHHHHcCCCCCCCHHH
Q 044498          240 CVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP-IHPIPGP-EGVRGRNSDDTLINEELGWAPTMKQKD  316 (366)
Q Consensus       240 ~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e  316 (366)
                      +|+++..+++.+ .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+.+ .......+|++|++++|||.|++++++
T Consensus       246 va~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e  325 (346)
T 4egb_A          246 HCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQ  325 (346)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred             HHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHH
Confidence            999999999876 5789999999999999999999999998765 3333332 334556789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 044498          317 ELRITYFWIKEQVEKEK  333 (366)
Q Consensus       317 ~l~~~~~~~~~~~~~~~  333 (366)
                      +|+++++||+++..+..
T Consensus       326 ~l~~~~~~~~~~~~~~~  342 (346)
T 4egb_A          326 GLQETVQWYEKNEEWWK  342 (346)
T ss_dssp             HHHHHHHHHHHCHHHHG
T ss_pred             HHHHHHHHHHhhhhhhh
Confidence            99999999999876544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-43  Score=329.61  Aligned_cols=294  Identities=17%  Similarity=0.199  Sum_probs=244.1

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      |.++|+|||||||||||++++++|+++|++         |++++|........       ...++.++.+|++|.+++.+
T Consensus         2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   72 (341)
T 3enk_A            2 MSTKGTILVTGGAGYIGSHTAVELLAHGYD---------VVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALAR   72 (341)
T ss_dssp             CCSSCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHH
T ss_pred             CCCCcEEEEecCCcHHHHHHHHHHHHCCCc---------EEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHH
Confidence            446689999999999999999999999999         99999876543221       12357899999999999999


Q ss_pred             hhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           93 MTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        93 ~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      +++  ++|+|||+|+.... .....++...++.|+.++.++++++++.+++  +|||+||.++||.....+.  .|+.  
T Consensus        73 ~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~iv~~SS~~~~g~~~~~~~--~e~~--  145 (341)
T 3enk_A           73 IFDAHPITAAIHFAALKAV-GESVAKPIEYYRNNLDSLLSLLRVMRERAVK--RIVFSSSATVYGVPERSPI--DETF--  145 (341)
T ss_dssp             HHHHSCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGBCSCSSSSB--CTTS--
T ss_pred             HHhccCCcEEEECcccccc-CccccChHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEecceEecCCCCCCC--CCCC--
Confidence            987  89999999997542 2234556678999999999999999999998  9999999999988765543  5554  


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHcC-CcEEEeCC--------------------CcHHHHHHHHHh-CCCCeEEec--
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDFE-IECRLVGE--------------------KAPAAFSRKAVT-STDNFEMWG--  226 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~~-~~~~i~r~--------------------~~~~~~~~~~~~-~~~~~~i~~--  226 (366)
                      +..|.+.|+.+|+++|.+++.++.+++ ++++++|+                    ..+..++..... +...+.+++  
T Consensus       146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (341)
T 3enk_A          146 PLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSD  225 (341)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCc
Confidence            777899999999999999999998886 99999863                    122334444333 345677777  


Q ss_pred             ----CCcceeeeeeHHHHHHHHHHHHhc----CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCccccc
Q 044498          227 ----DGKQTRSLTFIDECVEGVLRLIKS----DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNS  297 (366)
Q Consensus       227 ----~~~~~~~~i~v~D~a~~~~~~l~~----~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~  297 (366)
                          ++.+.++|+|++|+|++++.+++.    ..+++||+++++.+|+.|+++.+.+.+|.+.++...+.+. .......
T Consensus       226 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  305 (341)
T 3enk_A          226 YPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYA  305 (341)
T ss_dssp             SSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECB
T ss_pred             cCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCcccccc
Confidence                788999999999999999999876    4689999999999999999999999999987776665443 3455688


Q ss_pred             ChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          298 DDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       298 ~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      |++|++++|||.|+++++++|+++++||+++.
T Consensus       306 d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  337 (341)
T 3enk_A          306 NPAAAAETIGWKAERDLERMCADHWRWQENNP  337 (341)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=2.6e-43  Score=323.99  Aligned_cols=288  Identities=26%  Similarity=0.358  Sum_probs=241.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|||||||||||++|+++|+++|++         |++++|...........+++++.+|+.+.+ +.+++++ |+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~   69 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYE---------VVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHF   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCE---------EEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEEC
Confidence            58999999999999999999999999         999999876544444556799999999998 8888888 999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      |+... ......++...+++|+.++.++++++++.+++  +|||+||.++||.....+.  .|+.  +..|.+.|+.+|+
T Consensus        70 A~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~--~iv~~SS~~vyg~~~~~~~--~e~~--~~~p~~~Y~~sK~  142 (312)
T 3ko8_A           70 AANPE-VRLSTTEPIVHFNENVVATFNVLEWARQTGVR--TVVFASSSTVYGDADVIPT--PEEE--PYKPISVYGAAKA  142 (312)
T ss_dssp             CSSCS-SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEGGGGCSCSSSSB--CTTS--CCCCCSHHHHHHH
T ss_pred             CCCCC-chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEeCcHHHhCCCCCCCC--CCCC--CCCCCChHHHHHH
Confidence            99653 23455667788999999999999999999999  9999999999998766543  5554  7789999999999


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCC----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhc---
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEK----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS---  250 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~---  250 (366)
                      ++|.+++.++.+++++++++|+.          .+..++..+..+...+.+++++.+.++|+|++|+|++++.++++   
T Consensus       143 ~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~  222 (312)
T 3ko8_A          143 AGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEE  222 (312)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccc
Confidence            99999999999999999999642          34567777776446677888999999999999999999999987   


Q ss_pred             --CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCC-------CCCCcccccChHHHHHHcCCCCCCCHHHHHHHH
Q 044498          251 --DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-------PEGVRGRNSDDTLINEELGWAPTMKQKDELRIT  321 (366)
Q Consensus       251 --~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-------~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~  321 (366)
                        ..+++||+++++.+|+.|+++.+.+.+|.+..+...|.       +.......+|++|++++|||.|+++++++|+++
T Consensus       223 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~  302 (312)
T 3ko8_A          223 MDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKT  302 (312)
T ss_dssp             SCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHH
T ss_pred             cCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHH
Confidence              35789999999999999999999999998876665443       223344678999999999999999999999999


Q ss_pred             HHHHHHHH
Q 044498          322 YFWIKEQV  329 (366)
Q Consensus       322 ~~~~~~~~  329 (366)
                      ++|++++.
T Consensus       303 ~~~~~~~~  310 (312)
T 3ko8_A          303 AEDLAKEL  310 (312)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhhh
Confidence            99999864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.3e-43  Score=330.96  Aligned_cols=285  Identities=20%  Similarity=0.226  Sum_probs=239.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++|+|||||||||||++|+++|+++|++         |++++|....      .+++++.+|+++.+.+.++++++|+||
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~---------V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vi   82 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRT---------VRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVL   82 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCC---------EEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCE---------EEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEE
Confidence            6689999999999999999999999999         9999998654      356999999999999999999999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+|+....   ........+++|+.++.++++++++.+++  ||||+||.++||.......++.|+.  +..|.+.|+.+
T Consensus        83 h~A~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~~~~--~~V~~SS~~vyg~~~~~~~~~~E~~--~~~~~~~Y~~s  155 (347)
T 4id9_A           83 HLGAFMSW---APADRDRMFAVNVEGTRRLLDAASAAGVR--RFVFASSGEVYPENRPEFLPVTEDH--PLCPNSPYGLT  155 (347)
T ss_dssp             ECCCCCCS---SGGGHHHHHHHHTHHHHHHHHHHHHTTCS--EEEEEEEGGGTTTTSCSSSSBCTTS--CCCCCSHHHHH
T ss_pred             ECCcccCc---chhhHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEECCHHHhCCCCCCCCCcCCCC--CCCCCChHHHH
Confidence            99997642   22333778999999999999999999999  9999999999998433332235554  77899999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCCcHH-------------------------------H----HHHHHHhCCCCeEEec
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEKAPA-------------------------------A----FSRKAVTSTDNFEMWG  226 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~~~~-------------------------------~----~~~~~~~~~~~~~i~~  226 (366)
                      |+++|++++.++.+++++++++|+..+.                               .    ++..+. .+.++.+++
T Consensus       156 K~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g  234 (347)
T 4id9_A          156 KLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRD-IGEPSHILA  234 (347)
T ss_dssp             HHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHC-CSSCCEEEE
T ss_pred             HHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHH-cCCCeEEeC
Confidence            9999999999999999999999865322                               2    233333 367778888


Q ss_pred             CCcceeee----eeHHHHHHHHHHHHhcC--CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChH
Q 044498          227 DGKQTRSL----TFIDECVEGVLRLIKSD--FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDT  300 (366)
Q Consensus       227 ~~~~~~~~----i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  300 (366)
                      ++.+.++|    +|++|+|++++.+++.+  .+++||+++++.+|+.|+++.+.+.+|.+..+...|...  ....+|++
T Consensus       235 ~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~--~~~~~d~~  312 (347)
T 4id9_A          235 RNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDG--VYYHTSNE  312 (347)
T ss_dssp             ECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCC--CBCCBCCH
T ss_pred             CCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcc--cccccCHH
Confidence            88888999    99999999999999876  488999999999999999999999999886665554332  36789999


Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 044498          301 LINEELGWAPTMKQKDELRITYFWIKEQVEK  331 (366)
Q Consensus       301 k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~  331 (366)
                      |++++|||.|+++++++|+++++||+++...
T Consensus       313 k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  343 (347)
T 4id9_A          313 RIRNTLGFEAEWTMDRMLEEAATARRQRLAK  343 (347)
T ss_dssp             HHHHHHCCCCCCCHHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999999987643

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-43  Score=324.07  Aligned_cols=292  Identities=24%  Similarity=0.351  Sum_probs=237.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ||+|||||||||||++|+++|+++| .         ++++++...........+++++.+|+++ +++.++++++|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~---------~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih   69 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-E---------IVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWH   69 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-C---------EEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-C---------EEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEE
Confidence            5789999999999999999999999 5         6666654443333334457899999999 889999999999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+... ......++...+++|+.++.++++++++.+++  +|||+||.++||.....+.  .|+.  +..|.+.|+.+|
T Consensus        70 ~a~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~iv~~SS~~vyg~~~~~~~--~E~~--~~~~~~~Y~~sK  142 (313)
T 3ehe_A           70 IAANPD-VRIGAENPDEIYRNNVLATYRLLEAMRKAGVS--RIVFTSTSTVYGEAKVIPT--PEDY--PTHPISLYGASK  142 (313)
T ss_dssp             CCCCCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGGCSCSSSSB--CTTS--CCCCCSHHHHHH
T ss_pred             CCCCCC-hhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEeCchHHhCcCCCCCC--CCCC--CCCCCCHHHHHH
Confidence            999653 22445667888999999999999999999998  9999999999998765543  5544  778899999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCC----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEK----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                      +++|.+++.++.+++++++++|+.          .+..++..+..+..++.+++++.+.++|+|++|+|++++.+++.. 
T Consensus       143 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  222 (313)
T 3ehe_A          143 LACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE  222 (313)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCC
Confidence            999999999999999999999753          245677777764467778899999999999999999999999854 


Q ss_pred             CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC----CCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Q 044498          252 FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP----EGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE  327 (366)
Q Consensus       252 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~----~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~  327 (366)
                      .+++||+++++++|+.|+++.+.+.+|.+..+...+.+    .......+|++|+ ++|||.|+++++++|+++++||++
T Consensus       223 ~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lG~~p~~~~~e~l~~~~~~~~~  301 (313)
T 3ehe_A          223 RVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKL-KRLGWKPRYNSEEAVRMAVRDLVE  301 (313)
T ss_dssp             SEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHH-HHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred             CCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHH-HHcCCCCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999988766554431    2234467899999 559999999999999999999999


Q ss_pred             HHHHhh
Q 044498          328 QVEKEK  333 (366)
Q Consensus       328 ~~~~~~  333 (366)
                      +.+...
T Consensus       302 ~~~~~~  307 (313)
T 3ehe_A          302 DLDEEG  307 (313)
T ss_dssp             HHHC--
T ss_pred             Cccccc
Confidence            875543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.1e-43  Score=334.51  Aligned_cols=296  Identities=18%  Similarity=0.243  Sum_probs=243.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCC-ChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLR-VMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~-~~~~l~~~~~~~d   98 (366)
                      +||+|||||||||||++|+++|+++ |++         |++++|+....... ...+++++.+|++ +.+.+.++++++|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~---------V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d   93 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWE---------VFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCD   93 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCE---------EEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCE---------EEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCC
Confidence            5789999999999999999999998 999         99999987553332 2256899999999 9999999999999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC----CC-C
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW----PA-E  173 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~----~~-~  173 (366)
                      +|||+|+.... ..+..++...+++|+.++.++++++++.+ +  ||||+||.++||.....+.  .|+...    +. .
T Consensus        94 ~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~--~~v~~SS~~vyg~~~~~~~--~e~~~~~~~~p~~~  167 (372)
T 3slg_A           94 VILPLVAIATP-ATYVKQPLRVFELDFEANLPIVRSAVKYG-K--HLVFPSTSEVYGMCADEQF--DPDASALTYGPINK  167 (372)
T ss_dssp             EEEECBCCCCH-HHHHHCHHHHHHHHTTTTHHHHHHHHHHT-C--EEEEECCGGGGBSCCCSSB--CTTTCCEEECCTTC
T ss_pred             EEEEcCccccH-HHHhhCHHHHHHHHHHHHHHHHHHHHHhC-C--cEEEeCcHHHhCCCCCCCC--CccccccccCCCCC
Confidence            99999997642 22345677788999999999999999999 8  9999999999998765543  454411    11 5


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-------------------cHHHHHHHHHhCCCCeEEecCCcceeee
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-------------------APAAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                      |.+.|+.+|+++|++++.++.+ +++++++|+.                   .+..++..+.. +.++.+++++.+.++|
T Consensus       168 p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~  245 (372)
T 3slg_A          168 PRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR-GENISLVDGGSQKRAF  245 (372)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHH-TCCEEEGGGGCCEEEC
T ss_pred             CCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHc-CCCcEEeCCCceEEEE
Confidence            7779999999999999999888 9999999642                   24556666666 7788888888999999


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecC-CCcccHHHHHHHHHHhcCCCCCCCcCCCC----------------CCCc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIPGP----------------EGVR  293 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~----------------~~~~  293 (366)
                      +|++|+|++++.+++.+    .+++||+++ ++.+|+.|+++.+.+.+|.+..+...|..                ....
T Consensus       246 i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (372)
T 3slg_A          246 TYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQ  325 (372)
T ss_dssp             EEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------C
T ss_pred             EEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccc
Confidence            99999999999999874    578999999 48999999999999999987554332210                1334


Q ss_pred             ccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhhh
Q 044498          294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKA  334 (366)
Q Consensus       294 ~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~  334 (366)
                      ....|++|++++|||.|+++++++|+++++||+++..+...
T Consensus       326 ~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~  366 (372)
T 3slg_A          326 NRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADARA  366 (372)
T ss_dssp             CCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHHHHHH
T ss_pred             eeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999998765544

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2.9e-42  Score=319.54  Aligned_cols=291  Identities=20%  Similarity=0.253  Sum_probs=237.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~v  100 (366)
                      ||+|||||||||||++++++|+++|++         |++++|...........+++++.+|+++.+.+.++++  ++|+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   71 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLS---------VVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAV   71 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCE---------EEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            579999999999999999999999999         9999987543222212257899999999999999988  89999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      ||+|+.... .....++...+++|+.++.++++++++.+++  ||||+||.++||.....+  +.|+.  +..|.+.|+.
T Consensus        72 ih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~--~~v~~Ss~~~~~~~~~~~--~~E~~--~~~~~~~Y~~  144 (330)
T 2c20_A           72 MHFAADSLV-GVSMEKPLQYYNNNVYGALCLLEVMDEFKVD--KFIFSSTAATYGEVDVDL--ITEET--MTNPTNTYGE  144 (330)
T ss_dssp             EECCCCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEECCGGGGCSCSSSS--BCTTS--CCCCSSHHHH
T ss_pred             EECCcccCc-cccccCHHHHHHHHhHHHHHHHHHHHHcCCC--EEEEeCCceeeCCCCCCC--CCcCC--CCCCCChHHH
Confidence            999996531 1223466778999999999999999999998  999999999999765443  25554  6788999999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEeCCC--------------------cHHHHHHHHHhCCCCeEEec------CCcceeee
Q 044498          181 EKLATEGLCKHYTKDFEIECRLVGEK--------------------APAAFSRKAVTSTDNFEMWG------DGKQTRSL  234 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~~~~i~r~~--------------------~~~~~~~~~~~~~~~~~i~~------~~~~~~~~  234 (366)
                      +|+++|.+++.++.+++++++++|+.                    .+..++..+..++..+.+++      ++.+.++|
T Consensus       145 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (330)
T 2c20_A          145 TKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY  224 (330)
T ss_dssp             HHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECE
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEee
Confidence            99999999999998889999999752                    12223333333345677776      67788999


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccChHHHHHHcCCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDDTLINEELGWA  309 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~k~~~~lG~~  309 (366)
                      +|++|+|++++.+++.+    .+++||+++++.+|+.|+++.+.+.+|.+.++...+... ......+|++|++++|||.
T Consensus       225 v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  304 (330)
T 2c20_A          225 IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWD  304 (330)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSSCCSEECBCCHHHHHHHCCC
T ss_pred             EeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCCcccccccCHHHHHHHhCCC
Confidence            99999999999998763    368999999999999999999999999887665555433 3445678999999999999


Q ss_pred             CCC-CHHHHHHHHHHHHHHHH
Q 044498          310 PTM-KQKDELRITYFWIKEQV  329 (366)
Q Consensus       310 p~~-~~~e~l~~~~~~~~~~~  329 (366)
                      |++ +++++|+++++||+++.
T Consensus       305 p~~~~l~~~l~~~~~~~~~~~  325 (330)
T 2c20_A          305 PRYVNVKTIIEHAWNWHQKQP  325 (330)
T ss_dssp             CSCCCHHHHHHHHHHHHHHCS
T ss_pred             CccCCHHHHHHHHHHHHHHhh
Confidence            999 99999999999998865

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=3.5e-42  Score=323.19  Aligned_cols=289  Identities=18%  Similarity=0.206  Sum_probs=237.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHH--cCCCCCCCCCccEEEEEeCCCc------------c-ccccccccceEEEccCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKS--ERHYSTSIPNALYIIASDWNKN------------E-HMMEDMFCHEFHLVDLRV   86 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~--~g~~~~~~~~~~~V~~~~r~~~------------~-~~~~~~~~v~~~~~D~~~   86 (366)
                      ++|+|||||||||||++|+++|++  .|++         |++++|...            . .......++.++.+|+++
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   79 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAK---------VVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINN   79 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSE---------EEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCe---------EEEEECCCccccccccchhhhhhhhhccccCceEEECCCCC
Confidence            668999999999999999999999  8999         999998654            1 112233457899999999


Q ss_pred             hhHHHhh-hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           87 MDNCLRM-TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        87 ~~~l~~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                      .+.+.++ ..++|+|||+|+...   ....++...+++|+.++.++++++++.++   +|||+||.++||.... +  +.
T Consensus        80 ~~~~~~~~~~~~D~vih~A~~~~---~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~---~~V~~SS~~vyg~~~~-~--~~  150 (362)
T 3sxp_A           80 PLDLRRLEKLHFDYLFHQAAVSD---TTMLNQELVMKTNYQAFLNLLEIARSKKA---KVIYASSAGVYGNTKA-P--NV  150 (362)
T ss_dssp             HHHHHHHTTSCCSEEEECCCCCG---GGCCCHHHHHHHHTHHHHHHHHHHHHTTC---EEEEEEEGGGGCSCCS-S--BC
T ss_pred             HHHHHHhhccCCCEEEECCccCC---ccccCHHHHHHHHHHHHHHHHHHHHHcCC---cEEEeCcHHHhCCCCC-C--CC
Confidence            9999998 789999999999654   34567788899999999999999999887   6999999999998765 3  36


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC---------------CcHHHHHHHHHhCCCCeEEecCCcc
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE---------------KAPAAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~---------------~~~~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      |+.  +..|.++|+.+|+++|.+++.++.+  ++++++|+               ..+..++..+.. +.++.+++++.+
T Consensus       151 E~~--~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~  225 (362)
T 3sxp_A          151 VGK--NESPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMA-FKEVKLFEFGEQ  225 (362)
T ss_dssp             TTS--CCCCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHT-TSEEECSGGGCC
T ss_pred             CCC--CCCCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHh-CCCeEEECCCCe
Confidence            655  7889999999999999999998765  77877753               234556666665 677777788889


Q ss_pred             eeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC--CCCcccccChHHHHHHcCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP--EGVRGRNSDDTLINEELGW  308 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~k~~~~lG~  308 (366)
                      .++|+|++|+|++++.+++.+..++||+++++++|+.|+++.+.+.+| +.++...|.+  .......+|++|+++.|||
T Consensus       226 ~~~~i~v~Dva~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  304 (362)
T 3sxp_A          226 LRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAHIEPTILDLDY  304 (362)
T ss_dssp             EEECEEHHHHHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-------CCCCBCCHHHHHHHCC
T ss_pred             EEccEEHHHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCCcCcccceecCHHHHHHHhCC
Confidence            999999999999999999887555999999999999999999999999 7766666654  3345568899999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhh
Q 044498          309 APTMKQKDELRITYFWIKEQVEKEKA  334 (366)
Q Consensus       309 ~p~~~~~e~l~~~~~~~~~~~~~~~~  334 (366)
                      .|+++++++|+++++||+++......
T Consensus       305 ~p~~~l~e~l~~~~~~~~~~~~~~~~  330 (362)
T 3sxp_A          305 TPLYDLESGIKDYLPHIHAIFKGQRA  330 (362)
T ss_dssp             CCCCCHHHHHHHHHHHHTCC------
T ss_pred             CCCCCHHHHHHHHHHHHHHHhhcccc
Confidence            99999999999999999987654433

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=6.3e-42  Score=314.75  Aligned_cols=286  Identities=20%  Similarity=0.236  Sum_probs=236.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      |+|||||||||||++++++|+++|++         |++++|...........++.++.+|+++.+.+.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   71 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLE---------VAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVS   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCE---------EEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCE---------EEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            58999999999999999999999999         9999885433222212356889999999999999887  899999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc-cccCC-CCCCCCCcccccCCCCCCCCchH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA-CIYPE-FKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~-~vyg~-~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |+|+.... .....++...+++|+.++.++++++++.+++  ||||+||. ++||. ....+  +.|+.  +..|.+.|+
T Consensus        72 ~~a~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~iv~~SS~~~~~g~~~~~~~--~~E~~--~~~~~~~Y~  144 (311)
T 2p5y_A           72 HQAAQASV-KVSVEDPVLDFEVNLLGGLNLLEACRQYGVE--KLVFASTGGAIYGEVPEGER--AEETW--PPRPKSPYA  144 (311)
T ss_dssp             ECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS--EEEEEEEHHHHHCCCCTTCC--BCTTS--CCCCCSHHH
T ss_pred             ECccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeCCChhhcCCCCCCCC--cCCCC--CCCCCChHH
Confidence            99996531 1233466778999999999999999999998  99999998 89986 33333  24443  667889999


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCC--------------cHHHHHHHHHhCCCCeEEe-----cCCcceeeeeeHHHH
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEK--------------APAAFSRKAVTSTDNFEMW-----GDGKQTRSLTFIDEC  240 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~--------------~~~~~~~~~~~~~~~~~i~-----~~~~~~~~~i~v~D~  240 (366)
                      .+|+++|.+++.++.+++++++++|+.              .+..++..+.. +.++.++     +++.+.++|+|++|+
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~v~Dv  223 (311)
T 2p5y_A          145 ASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLK-GLPVTLYARKTPGDEGCVRDYVYVGDV  223 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHH-TCCEEEECSSSTTSCCCEECEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHc-CCCcEEEecccCCCCCeEEeeEEHHHH
Confidence            999999999999988889999999643              13445555555 6677777     788889999999999


Q ss_pred             HHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChHHHHHHcCCCCCCCHHHHHH
Q 044498          241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDTLINEELGWAPTMKQKDELR  319 (366)
Q Consensus       241 a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~  319 (366)
                      |++++.+++.+ +++||+++++.+|+.|+++.+.+.+|.+.++...|.+ .......+|++|+++ |||.|+++++++|+
T Consensus       224 a~a~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~~~l~  301 (311)
T 2p5y_A          224 AEAHALALFSL-EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMA-HGWRPKVGFQEGIR  301 (311)
T ss_dssp             HHHHHHHHHHC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHT-TTCCCSSCHHHHHH
T ss_pred             HHHHHHHHhCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHH-CCCCCCCCHHHHHH
Confidence            99999999876 8899999999999999999999999988766555543 234567889999999 99999999999999


Q ss_pred             HHHHHHHHH
Q 044498          320 ITYFWIKEQ  328 (366)
Q Consensus       320 ~~~~~~~~~  328 (366)
                      ++++||+++
T Consensus       302 ~~~~~~~~~  310 (311)
T 2p5y_A          302 LTVDHFRGA  310 (311)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHhh
Confidence            999999764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.4e-42  Score=317.69  Aligned_cols=283  Identities=17%  Similarity=0.201  Sum_probs=235.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC--CCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG--VDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~--~d~   99 (366)
                      +||+|||||||||||++|+++|+++|+.               .     .....+++++.+|++|.+.+.+++++  +|+
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---------------~-----~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAGL---------------P-----GEDWVFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTCC---------------T-----TCEEEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCCc---------------c-----cccccccCceecccCCHHHHHHHHhhcCCCE
Confidence            6789999999999999999999999862               0     00112346678999999999999876  999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC--CCCCCC-
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW--PAEPQD-  176 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~--~~~p~~-  176 (366)
                      |||+|+..+.......++...+++|+.++.++++++++.+++  ||||+||.++||.....+.  .|+...  +..|.+ 
T Consensus        65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~--~~v~~SS~~vyg~~~~~~~--~E~~~~~~~~~p~~~  140 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGAR--KVVSCLSTCIFPDKTTYPI--DETMIHNGPPHNSNF  140 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEECCGGGSCSSCCSSB--CGGGGGBSCCCSSSH
T ss_pred             EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEEcchhhcCCCCCCCc--cccccccCCCCCCcc
Confidence            999999764333445677788999999999999999999999  9999999999998766553  665422  455666 


Q ss_pred             chHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHH----HHhCCCCeEEecCCcceeeeeeH
Q 044498          177 AYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRK----AVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       177 ~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~----~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                      +|+.+|+++|+++..++++++++++++|+.               .+..++..    +.. +.++.+++++.+.++|+|+
T Consensus       141 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v  219 (319)
T 4b8w_A          141 GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSS-GSALTVWGTGNPRRQFIYS  219 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHH-TCCEEEESCSCCEECEEEH
T ss_pred             hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhcc-CCceEEeCCCCeeEEEEeH
Confidence            599999999999999999999999998532               33455665    444 7888888999999999999


Q ss_pred             HHHHHHHHHHHhcC---CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChHHHHHHcCCCCCCC
Q 044498          238 DECVEGVLRLIKSD---FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDTLINEELGWAPTMK  313 (366)
Q Consensus       238 ~D~a~~~~~~l~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~k~~~~lG~~p~~~  313 (366)
                      +|+|+++..+++++   .+++||+++++.+|+.|+++.+.+.+|.+.++...+.+ ........|++|++++|||.|.++
T Consensus       220 ~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~  299 (319)
T 4b8w_A          220 LDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTP  299 (319)
T ss_dssp             HHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCCC
T ss_pred             HHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCCC
Confidence            99999999999873   35699999999999999999999999988777666543 344556899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 044498          314 QKDELRITYFWIKEQV  329 (366)
Q Consensus       314 ~~e~l~~~~~~~~~~~  329 (366)
                      ++++|+++++||+++.
T Consensus       300 ~~~~l~~~~~~~~~~~  315 (319)
T 4b8w_A          300 FKQAVKETCAWFTDNY  315 (319)
T ss_dssp             HHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-41  Score=312.53  Aligned_cols=294  Identities=15%  Similarity=0.121  Sum_probs=236.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----cc--ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----ME--DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~--~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|+|||||||||||++|+++|+++|++         |++++|......    ..  ...+++++.+|+++.+.+.++++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   83 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYR---------VHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVI   83 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCe---------EEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHH
Confidence            5689999999999999999999999999         999998765321    00  12357899999999999999887


Q ss_pred             C--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC-CceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498           96 G--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV-MSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus        96 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                      +  +|+|||+|+.... .....++...+++|+.++.++++++++.++ +  +|||+||.++||.....+.  .|+.  +.
T Consensus        84 ~~~~d~Vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~--~~v~~SS~~v~g~~~~~~~--~E~~--~~  156 (335)
T 1rpn_A           84 KAQPQEVYNLAAQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQFSPET--RFYQASTSEMFGLIQAERQ--DENT--PF  156 (335)
T ss_dssp             HHCCSEEEECCSCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTS--EEEEEEEGGGGCSCSSSSB--CTTS--CC
T ss_pred             HcCCCEEEECccccch-hhhhhChHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEeCHHHhCCCCCCCC--Cccc--CC
Confidence            4  7999999996531 122456677899999999999999999986 8  9999999999998765442  5554  77


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC----------c----HHHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK----------A----PAAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~----------~----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                      .|.+.|+.+|+++|.+++.++.+++++++++|+.          .    +..++..+..+......++++++.++|+|++
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~  236 (335)
T 1rpn_A          157 YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  236 (335)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHH
Confidence            8899999999999999999998889999988632          2    2334444444333444568888999999999


Q ss_pred             HHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCC--CCcCC---CCCCCcccccChHHHHHHcCCCCCCC
Q 044498          239 ECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLP--IHPIP---GPEGVRGRNSDDTLINEELGWAPTMK  313 (366)
Q Consensus       239 D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~---~~~~~~~~~~~~~k~~~~lG~~p~~~  313 (366)
                      |+|++++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+..  +...+   .+.......+|++|++++|||.|+++
T Consensus       237 Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  316 (335)
T 1rpn_A          237 DYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTS  316 (335)
T ss_dssp             HHHHHHHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSC
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCC
Confidence            99999999999877799999999999999999999999998632  11111   12233445789999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 044498          314 QKDELRITYFWIKEQVEK  331 (366)
Q Consensus       314 ~~e~l~~~~~~~~~~~~~  331 (366)
                      ++++|+++++||+++..+
T Consensus       317 l~e~l~~~~~~~~~~~~~  334 (335)
T 1rpn_A          317 LDELIRMMVEADLRRVSR  334 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcc
Confidence            999999999999998754

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=2.4e-41  Score=316.24  Aligned_cols=291  Identities=19%  Similarity=0.197  Sum_probs=239.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----------ccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----------~~~~v~~~~~D~~~~~~l   90 (366)
                      +||+|||||||||||++|+++|+++|++         |++++|........           ...++.++.+|+++.+.+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   96 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQK---------VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC   96 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHH
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHH
Confidence            5789999999999999999999999999         99999875421100           024578999999999999


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      .++++++|+|||+|+.... .....++...+++|+.++.++++++.+.+++  +|||+||.++|+.....+.  .|+.  
T Consensus        97 ~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~--~~v~~SS~~~~~~~~~~~~--~E~~--  169 (352)
T 1sb8_A           97 NNACAGVDYVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARDAKVQ--SFTYAASSSTYGDHPGLPK--VEDT--  169 (352)
T ss_dssp             HHHHTTCSEEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS--EEEEEEEGGGGTTCCCSSB--CTTC--
T ss_pred             HHHhcCCCEEEECCcccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEeccHHhcCCCCCCCC--CCCC--
Confidence            9999999999999996531 1233466778999999999999999999998  9999999999998765443  5544  


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                      +..|.+.|+.+|+++|.+++.++.+++++++++|+.               .+..++..+.. +.++.+++++.+.++|+
T Consensus       170 ~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~~i  248 (352)
T 1sb8_A          170 IGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GDDVYINGDGETSRDFC  248 (352)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHC-CCCcEEeCCCCceEeeE
Confidence            678899999999999999999998889999998632               23456666665 67777788888999999


Q ss_pred             eHHHHHHHHHHHHhc---CCCCcEEecCCCcccHHHHHHHHHHhc---CCCCCCC--cCCC-CCCCcccccChHHHHHHc
Q 044498          236 FIDECVEGVLRLIKS---DFREPLNIGSDEMVSINEMAEIILSFE---NEKLPIH--PIPG-PEGVRGRNSDDTLINEEL  306 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~---~~~~~~~i~~~~~~s~~el~~~i~~~~---g~~~~~~--~~~~-~~~~~~~~~~~~k~~~~l  306 (366)
                      |++|+|++++.++..   ..+++||+++++.+|+.|+++.+.+.+   |.+....  +.+. +.......+|++|++++|
T Consensus       249 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  328 (352)
T 1sb8_A          249 YIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLL  328 (352)
T ss_dssp             EHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHT
T ss_pred             EHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHh
Confidence            999999999998875   257899999999999999999999999   8775532  2222 223445678999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHH
Q 044498          307 GWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       307 G~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ||.|+++++++|+++++||+++.
T Consensus       329 G~~p~~~~~e~l~~~~~~~~~~~  351 (352)
T 1sb8_A          329 GYAPKYDVSAGVALAMPWYIMFL  351 (352)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999998763

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=3e-41  Score=311.49  Aligned_cols=286  Identities=18%  Similarity=0.238  Sum_probs=235.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC--CCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG--VDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~--~d~   99 (366)
                      ++|+|||||||||||++|+++|+++|++         |++++|..... .   .++.++.+|++|.+.+.+++++  +|+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~---------V~~~~r~~~~~-~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVE---------VFGTSRNNEAK-L---PNVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCTTCC-C---TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCE---------EEEEecCCccc-c---ceeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            5678999999999999999999999999         99999886542 1   2678999999999999998875  999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCC--CCCCCCcccccCCCCCCCC
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEF--KQLDTDVKESEAWPAEPQD  176 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~--~~~~~~~~e~~~~~~~p~~  176 (366)
                      |||+|+.... .....++...+++|+.++.+++++++.. +++  ||||+||.++||..  ...+  +.|+.  +..|.+
T Consensus        78 vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~--~iv~~SS~~v~g~~~~~~~~--~~E~~--~~~~~~  150 (321)
T 2pk3_A           78 IFHLAAKSSV-KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDC--RILTIGSSEEYGMILPEESP--VSEEN--QLRPMS  150 (321)
T ss_dssp             EEECCSCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCC--EEEEEEEGGGTBSCCGGGCS--BCTTS--CCBCCS
T ss_pred             EEEcCcccch-hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEccHHhcCCCCCCCCC--CCCCC--CCCCCC
Confidence            9999996531 1233466778999999999999999876 578  99999999999875  3333  25554  777899


Q ss_pred             chHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHh--CC--CCeEEecCCcceeeeeeHHHHH
Q 044498          177 AYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVT--ST--DNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       177 ~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~--~~--~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                      .|+.+|+++|.+++.++.+++++++++|+.           .+..++..+..  .+  .++.+++++.+.++++|++|+|
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          151 PYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence            999999999999999998889999998643           23345554443  13  4667778888899999999999


Q ss_pred             HHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC--C-CCCCcccccChHHHHHHcCCCCCCCHHHH
Q 044498          242 EGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP--G-PEGVRGRNSDDTLINEELGWAPTMKQKDE  317 (366)
Q Consensus       242 ~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~--~-~~~~~~~~~~~~k~~~~lG~~p~~~~~e~  317 (366)
                      ++++.+++.+ .+++||+++++.+|+.|+++.+.+.+|.+.++...|  . +.......+|++|++++|||.|+++++++
T Consensus       231 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~  310 (321)
T 2pk3_A          231 QAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKS  310 (321)
T ss_dssp             HHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred             HHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHH
Confidence            9999999876 578999999999999999999999999876655544  1 22335578899999999999999999999


Q ss_pred             HHHHHHHHHH
Q 044498          318 LRITYFWIKE  327 (366)
Q Consensus       318 l~~~~~~~~~  327 (366)
                      |+++++||++
T Consensus       311 l~~~~~~~~~  320 (321)
T 2pk3_A          311 LFEILQSYRQ  320 (321)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHhc
Confidence            9999999975

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=9.7e-41  Score=310.01  Aligned_cols=291  Identities=19%  Similarity=0.248  Sum_probs=234.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcc----cccc--ccccceEEEccCCChhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNE----HMME--DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~----~~~~--~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +|+|||||||||||++++++|+++|  ++         |++++|....    ....  ...+++++.+|++|.+.+.+++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWE---------VINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCE---------EEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCE---------EEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh
Confidence            4689999999999999999999996  88         9999986421    1110  1235789999999999999999


Q ss_pred             cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC-CceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV-MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                      .++|+|||+|+.... .....++...+++|+.++.++++++.+.+. +  ||||+||.++||.....+  +.|+.  +..
T Consensus        74 ~~~d~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~--~iv~~SS~~vyg~~~~~~--~~E~~--~~~  146 (336)
T 2hun_A           74 RKVDGVVHLAAESHV-DRSISSPEIFLHSNVIGTYTLLESIRRENPEV--RFVHVSTDEVYGDILKGS--FTEND--RLM  146 (336)
T ss_dssp             HTCSEEEECCCCCCH-HHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTS--EEEEEEEGGGGCCCSSSC--BCTTB--CCC
T ss_pred             hCCCEEEECCCCcCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCc--EEEEeccHHHHCCCCCCC--cCCCC--CCC
Confidence            999999999996531 123346677899999999999999998874 6  999999999999765443  25554  677


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                      |.+.|+.+|+++|.+++.++.+++++++++|+.           .+..++..+.. +..+.+++++.+.++++|++|+|+
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~  225 (336)
T 2hun_A          147 PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASL-GLKIPIYGTGKNVRDWLYVEDHVR  225 (336)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHT-TCCEEEETC---CEEEEEHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHc-CCCceEeCCCCceeeeEEHHHHHH
Confidence            889999999999999999999889999998642           23455555655 677788888888999999999999


Q ss_pred             HHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC-CCcCCCC-CCCcccccChHHHHHHcCCCCCCCHHHHHH
Q 044498          243 GVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP-IHPIPGP-EGVRGRNSDDTLINEELGWAPTMKQKDELR  319 (366)
Q Consensus       243 ~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~  319 (366)
                      +++.+++.. .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+.+ .......+|++|++++|||.|+++++++|+
T Consensus       226 ~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~  305 (336)
T 2hun_A          226 AIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIK  305 (336)
T ss_dssp             HHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHH
T ss_pred             HHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHH
Confidence            999999765 5789999999999999999999999998643 2222222 223345789999999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 044498          320 ITYFWIKEQVE  330 (366)
Q Consensus       320 ~~~~~~~~~~~  330 (366)
                      ++++||+++..
T Consensus       306 ~~~~~~~~~~~  316 (336)
T 2hun_A          306 KTIDWYLKNEW  316 (336)
T ss_dssp             HHHHHHHHTHH
T ss_pred             HHHHHHHhCcc
Confidence            99999998754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.1e-40  Score=311.24  Aligned_cols=293  Identities=18%  Similarity=0.238  Sum_probs=237.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccc----cc-cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEH----MM-EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~----~~-~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +||+|||||||||||++|+++|+++  |++         |++++|.....    .. ....+++++.+|++|.+.+.+++
T Consensus         3 ~m~~vlVTGatG~iG~~l~~~L~~~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (348)
T 1oc2_A            3 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVH---------VTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLA   73 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCE---------EEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH
T ss_pred             cCcEEEEeCCccHHHHHHHHHHHHhCCCCE---------EEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHh
Confidence            4689999999999999999999999  889         99999865311    11 11235789999999999999999


Q ss_pred             cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC----------CCCc
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL----------DTDV  164 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~----------~~~~  164 (366)
                      +++|+|||+|+.... .....++...+++|+.++.++++++.+.++   ||||+||.++||.....          ..++
T Consensus        74 ~~~d~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~---~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~  149 (348)
T 1oc2_A           74 AKADAIVHYAAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARKYDI---RFHHVSTDEVYGDLPLREDLPGHGEGPGEKF  149 (348)
T ss_dssp             TTCSEEEECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHHTC---EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSB
T ss_pred             hcCCEEEECCcccCc-cchhhCHHHHHHHHHHHHHHHHHHHHHhCC---eEEEecccceeCCCcccccccccccccCCCc
Confidence            999999999996531 123346678899999999999999999875   79999999999865320          0123


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                      .|+.  +..|.+.|+.+|+++|.+++.++.+++++++++|+.           .+..++..+.. +.++.+++++.+.++
T Consensus       150 ~E~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  226 (348)
T 1oc2_A          150 TAET--NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILA-GIKPKLYGEGKNVRD  226 (348)
T ss_dssp             CTTS--CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHH-TCCCEEETTSCCEEE
T ss_pred             CCCC--CCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHc-CCCceEecCCCceEe
Confidence            4443  677889999999999999999998889999999643           23455666665 667777888889999


Q ss_pred             eeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC-CCcCCCC-CCCcccccChHHHHHHcCCCC
Q 044498          234 LTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP-IHPIPGP-EGVRGRNSDDTLINEELGWAP  310 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~-~~~~~~~~~~~k~~~~lG~~p  310 (366)
                      ++|++|+|++++.+++.+ .+++||+++++.+|+.|+++.+.+.+|.+.+ +.+.+.+ .......+|++|++++|||.|
T Consensus       227 ~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  306 (348)
T 1oc2_A          227 WIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTP  306 (348)
T ss_dssp             CEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCC
T ss_pred             eEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCC
Confidence            999999999999999765 5789999999999999999999999998753 3333322 223445689999999999999


Q ss_pred             CCC-HHHHHHHHHHHHHHHHH
Q 044498          311 TMK-QKDELRITYFWIKEQVE  330 (366)
Q Consensus       311 ~~~-~~e~l~~~~~~~~~~~~  330 (366)
                      +++ ++++|+++++||+++..
T Consensus       307 ~~~~~~~~l~~~~~~~~~~~~  327 (348)
T 1oc2_A          307 QFTDFSEGLEETIQWYTDNQD  327 (348)
T ss_dssp             SCCCHHHHHHHHHHHHHHTHH
T ss_pred             CCCcHHHHHHHHHHHHHHhhh
Confidence            998 99999999999998754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.2e-40  Score=309.51  Aligned_cols=290  Identities=21%  Similarity=0.285  Sum_probs=237.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc---C---CCCCCCCCccEEEEEeCCCcc----cccc--ccccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE---R---HYSTSIPNALYIIASDWNKNE----HMME--DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~---g---~~~~~~~~~~~V~~~~r~~~~----~~~~--~~~~v~~~~~D~~~~~~l~   91 (366)
                      |+|||||||||||++++++|+++   |   ++         |++++|....    ....  ...+++++.+|+++.+.+.
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   71 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADE---------VIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLA   71 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSE---------EEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHH
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceE---------EEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHH
Confidence            58999999999999999999997   7   88         9999986421    1111  1235789999999999999


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      +++.++|+|||+|+.... .....++...+++|+.++.++++++.+.+++  ||||+||.++||.....+  +.|+.  +
T Consensus        72 ~~~~~~d~Vih~A~~~~~-~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~--~~v~~SS~~vyg~~~~~~--~~E~~--~  144 (337)
T 1r6d_A           72 RELRGVDAIVHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVDAGVG--RVVHVSTNQVYGSIDSGS--WTESS--P  144 (337)
T ss_dssp             HHTTTCCEEEECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCC--EEEEEEEGGGGCCCSSSC--BCTTS--C
T ss_pred             HHhcCCCEEEECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEecchHHhCCCCCCC--CCCCC--C
Confidence            999999999999996531 1223466788999999999999999999998  999999999999765443  25544  6


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          172 AEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       172 ~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                      ..|.+.|+.+|+++|.+++.++.+++++++++|+.           .+..++..+.. +.++.+++++.+.++++|++|+
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dv  223 (337)
T 1r6d_A          145 LEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLD-GGTLPLYGDGANVREWVHTDDH  223 (337)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHT-TCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhc-CCCcEEeCCCCeeEeeEeHHHH
Confidence            77899999999999999999998889999999643           23455666655 6777888888899999999999


Q ss_pred             HHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC-CCcCCCC-CCCcccccChHHHHHHcCCCCCCCHHHH
Q 044498          241 VEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP-IHPIPGP-EGVRGRNSDDTLINEELGWAPTMKQKDE  317 (366)
Q Consensus       241 a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~  317 (366)
                      |+++..+++.+ .+++||+++++.+|+.|+++.+.+.+|.+.+ +.+.+.+ .......+|++|++++|||.|+++++++
T Consensus       224 a~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~  303 (337)
T 1r6d_A          224 CRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADG  303 (337)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred             HHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHH
Confidence            99999999765 5789999999999999999999999998643 2222222 2233456899999999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 044498          318 LRITYFWIKEQVE  330 (366)
Q Consensus       318 l~~~~~~~~~~~~  330 (366)
                      |+++++||+++..
T Consensus       304 l~~~~~~~~~~~~  316 (337)
T 1r6d_A          304 LARTVRWYRENRG  316 (337)
T ss_dssp             HHHHHHHHHHCHH
T ss_pred             HHHHHHHHHhchh
Confidence            9999999998754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=4.6e-41  Score=317.32  Aligned_cols=294  Identities=18%  Similarity=0.217  Sum_probs=233.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      +||+|||||||||||++|+++|+++| ++         |++++|........  ...+++++.+|+++.+.+.++++++|
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~---------V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d  101 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQ---------VHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYD  101 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSE---------EEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCce---------EEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCC
Confidence            56899999999999999999999999 99         99999876543211  13457899999999999999999999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCCCCCCCCcc--cccCC-CC-C
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEFKQLDTDVK--ESEAW-PA-E  173 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~~~~~~~~~--e~~~~-~~-~  173 (366)
                      +|||+|+.... ..+..++...+++|+.++.+++++|++. +++  ||||+||.++||.....+.  .  |+... +. .
T Consensus       102 ~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~--~~V~~SS~~vyg~~~~~~~--~~~E~~~~~~~~~  176 (377)
T 2q1s_A          102 YVFHLATYHGN-QSSIHDPLADHENNTLTTLKLYERLKHFKRLK--KVVYSAAGCSIAEKTFDDA--KATEETDIVSLHN  176 (377)
T ss_dssp             EEEECCCCSCH-HHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCC--EEEEEEEC----------------CCCCCCCSSC
T ss_pred             EEEECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEeCCHHHcCCCCCCCc--CcccccccccccC
Confidence            99999996531 1223466778999999999999999998 898  9999999999997654332  4  43211 44 7


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC------------------------cHHHHHHHHHhCCCCeEEecCCc
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK------------------------APAAFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~------------------------~~~~~~~~~~~~~~~~~i~~~~~  229 (366)
                      |.+.|+.+|+++|.+++.++.+++++++++|+.                        .+..++..+.. +.++.++++++
T Consensus       177 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~g~  255 (377)
T 2q1s_A          177 NDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK-GMPLPLENGGV  255 (377)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT-TCCCCCSGGGC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc-CCCeEEeCCCC
Confidence            889999999999999999988889999998532                        13345555554 66677778888


Q ss_pred             ceeeeeeHHHHHHH-HHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCc-ccccChHHHHHHc
Q 044498          230 QTRSLTFIDECVEG-VLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVR-GRNSDDTLINEEL  306 (366)
Q Consensus       230 ~~~~~i~v~D~a~~-~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~-~~~~~~~k~~~~l  306 (366)
                      +.++|+|++|+|++ ++.+++.+..++||+++++.+|+.|+++.+.+.+|.+..+...|.+. ... ...+|++|++++|
T Consensus       256 ~~~~~i~v~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~l  335 (377)
T 2q1s_A          256 ATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARREL  335 (377)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHHH
T ss_pred             eEEeeEEHHHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHHHHc
Confidence            99999999999999 99999876434999999999999999999999999887766665433 234 5788999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          307 GWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       307 G~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      ||.|+++++++|+++++||+++..
T Consensus       336 G~~p~~~l~e~l~~~~~~~~~~~~  359 (377)
T 2q1s_A          336 GFSADVSIDDGLRKTIEWTKANLA  359 (377)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHTHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhhh
Confidence            999999999999999999998754

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.4e-40  Score=310.50  Aligned_cols=290  Identities=19%  Similarity=0.246  Sum_probs=233.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc------cccc-------ccccceEEEccCCChhH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE------HMME-------DMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~------~~~~-------~~~~v~~~~~D~~~~~~   89 (366)
                      +|+|||||||||||++++++|+++|++         |++++|....      ....       ...+++++.+|+++.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   72 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYL---------PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGA   72 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCC---------EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHH
Confidence            579999999999999999999999999         9999886432      1100       12357899999999999


Q ss_pred             HHhhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           90 CLRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        90 l~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      +.++++  ++|+|||+|+.... .....++...+++|+.++.++++++++.+++  +|||+||.++||.....+  +.|+
T Consensus        73 ~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~iv~~SS~~~~g~~~~~~--~~E~  147 (348)
T 1ek6_A           73 LQRLFKKYSFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLLEIMKAHGVK--NLVFSSSATVYGNPQYLP--LDEA  147 (348)
T ss_dssp             HHHHHHHCCEEEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGGCSCSSSS--BCTT
T ss_pred             HHHHHHhcCCCEEEECCCCcCc-cchhhchHHHHHHHHHHHHHHHHHHHHhCCC--EEEEECcHHHhCCCCCCC--cCCC
Confidence            999887  89999999996531 1233466778999999999999999999998  999999999999765444  2555


Q ss_pred             cCCCCCC-CCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCC---------------------cHHHHHHHHHhCCCCeE
Q 044498          168 EAWPAEP-QDAYGLEKLATEGLCKHYTKDFE--IECRLVGEK---------------------APAAFSRKAVTSTDNFE  223 (366)
Q Consensus       168 ~~~~~~p-~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~---------------------~~~~~~~~~~~~~~~~~  223 (366)
                      .  +..| .+.|+.+|+++|.+++.++.+ +  ++++++|+.                     .+..+...+...+..+.
T Consensus       148 ~--~~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (348)
T 1ek6_A          148 H--PTGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (348)
T ss_dssp             S--CCCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             C--CCCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeE
Confidence            4  6667 889999999999999999877 5  899888631                     12233333332466777


Q ss_pred             Eec------CCcceeeeeeHHHHHHHHHHHHhcC---CC-CcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CC
Q 044498          224 MWG------DGKQTRSLTFIDECVEGVLRLIKSD---FR-EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GV  292 (366)
Q Consensus       224 i~~------~~~~~~~~i~v~D~a~~~~~~l~~~---~~-~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~  292 (366)
                      +++      ++.+.++|+|++|+|++++.+++.+   .+ ++||+++++.+|+.|+++.+.+.+|.+.++...|.+. ..
T Consensus       225 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~  304 (348)
T 1ek6_A          225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDV  304 (348)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCC
T ss_pred             EeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCccc
Confidence            776      5678899999999999999998763   33 7999999999999999999999999886665555432 33


Q ss_pred             cccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          293 RGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       293 ~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ....+|++|++++|||.|+++++++|+++++||+++.
T Consensus       305 ~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~  341 (348)
T 1ek6_A          305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (348)
T ss_dssp             SEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             hhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence            4567899999999999999999999999999998864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-40  Score=312.66  Aligned_cols=295  Identities=16%  Similarity=0.126  Sum_probs=234.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----ccc--------ccccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----MME--------DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~~~--------~~~~v~~~~~D~~~~~~l~   91 (366)
                      |+|||||||||||++++++|+++|++         |++++|.....    ...        ...+++++.+|++|.+++.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~   95 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYE---------VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLV   95 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCE---------EEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHH
Confidence            78999999999999999999999999         99999876431    111        1235789999999999999


Q ss_pred             hhhcC--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC---CceeEEEEecccccCCCCCCCCCccc
Q 044498           92 RMTSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV---MSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        92 ~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~---~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                      +++++  +|+|||+|+.... .....++...+++|+.++.++++++.+.++   +  +|||+||.++|+.....+.  .|
T Consensus        96 ~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~--~iv~~SS~~~~~~~~~~~~--~E  170 (375)
T 1t2a_A           96 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSV--KFYQASTSELYGKVQEIPQ--KE  170 (375)
T ss_dssp             HHHHHHCCSEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTC--EEEEEEEGGGTCSCSSSSB--CT
T ss_pred             HHHHhcCCCEEEECCCcccc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccc--eEEEecchhhhCCCCCCCC--Cc
Confidence            98874  7999999996531 122346677899999999999999999987   7  9999999999997664432  55


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC----------cH----HHHHHHHHhCCCCeEEecCCccee
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK----------AP----AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~----------~~----~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      +.  +..|.+.|+.+|+++|.+++.++.+++++++++|..          .+    ..++..+..+......++++++.+
T Consensus       171 ~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  248 (375)
T 1t2a_A          171 TT--PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  248 (375)
T ss_dssp             TS--CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             cC--CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCcee
Confidence            54  677889999999999999999999889999887521          22    234444455333445568888999


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC-------------------cCC---CCC
Q 044498          233 SLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH-------------------PIP---GPE  290 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~---~~~  290 (366)
                      +|+|++|+|++++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+.++.                   ..+   .+.
T Consensus       249 ~~i~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  328 (375)
T 1t2a_A          249 DWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPT  328 (375)
T ss_dssp             CCEEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSS
T ss_pred             eeEEHHHHHHHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcc
Confidence            9999999999999999887779999999999999999999999999864321                   111   112


Q ss_pred             CCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhhh
Q 044498          291 GVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKA  334 (366)
Q Consensus       291 ~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~  334 (366)
                      .......|++|++++|||.|+++++++|+++++||++.......
T Consensus       329 ~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~  372 (375)
T 1t2a_A          329 EVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTNPN  372 (375)
T ss_dssp             CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred             cchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhhccCCC
Confidence            23345679999999999999999999999999999998766543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=8.7e-41  Score=308.06  Aligned_cols=279  Identities=20%  Similarity=0.230  Sum_probs=230.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc---cc-cc----ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE---HM-ME----DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~---~~-~~----~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +||+|||||||||||++|+++|+++|++         |++++|....   .. ..    ...+++++.+|+.        
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--------   68 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEE---------VTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--------   68 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCC---------EEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--------
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCE---------EEEEecCCcccccchhhhhhhccCCCeeEEeCccc--------
Confidence            4689999999999999999999999999         9999997652   11 11    1123455555554        


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                        ++|+|||+|+.... .....++...++ |+.++.++++++++.+++  ||||+||.++||.....+.  .|+.  +..
T Consensus        69 --~~d~vi~~a~~~~~-~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~--~~v~~SS~~v~~~~~~~~~--~E~~--~~~  138 (321)
T 3vps_A           69 --DVRLVYHLASHKSV-PRSFKQPLDYLD-NVDSGRHLLALCTSVGVP--KVVVGSTCEVYGQADTLPT--PEDS--PLS  138 (321)
T ss_dssp             --TEEEEEECCCCCCH-HHHTTSTTTTHH-HHHHHHHHHHHHHHHTCC--EEEEEEEGGGGCSCSSSSB--CTTS--CCC
T ss_pred             --cCCEEEECCccCCh-HHHHhCHHHHHH-HHHHHHHHHHHHHHcCCC--eEEEecCHHHhCCCCCCCC--CCCC--CCC
Confidence              89999999997642 233456666777 999999999999999999  9999999999998765543  5554  778


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCC-cEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEI-ECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~-~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                      |.+.|+.+|+.+|.+++.++.++++ +++++|+.           .+..++..+.. +.++.+++++.+.++|+|++|+|
T Consensus       139 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva  217 (321)
T 3vps_A          139 PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLT-RNELPVEGDGEQRRDFTYITDVV  217 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHH-HSEEEEETTSCCEECEEEHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHc-CCCeEEeCCCCceEceEEHHHHH
Confidence            9999999999999999999998899 99998642           34566666666 67788889999999999999999


Q ss_pred             HHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChHHHHHHcCCCC-CCCHHHHHH
Q 044498          242 EGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDTLINEELGWAP-TMKQKDELR  319 (366)
Q Consensus       242 ~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~k~~~~lG~~p-~~~~~e~l~  319 (366)
                      ++++.+++.+..++||+++++.+|+.|+++.+. .+|.+.++...|.+ ........|++|++++|||.| +++++++|+
T Consensus       218 ~~~~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~  296 (321)
T 3vps_A          218 DKLVALANRPLPSVVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIR  296 (321)
T ss_dssp             HHHHHGGGSCCCSEEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCeEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHH
Confidence            999999988744599999999999999999999 99998777665543 345567899999999999999 889999999


Q ss_pred             HHHHHHHHHH
Q 044498          320 ITYFWIKEQV  329 (366)
Q Consensus       320 ~~~~~~~~~~  329 (366)
                      ++++||+++.
T Consensus       297 ~~~~~~~~~~  306 (321)
T 3vps_A          297 LTLEWWQSRD  306 (321)
T ss_dssp             HHHHHHHTSC
T ss_pred             HHHHHHHhCC
Confidence            9999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=6.2e-40  Score=305.64  Aligned_cols=292  Identities=22%  Similarity=0.312  Sum_probs=236.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ..||+|||||||||||++|+++|+++|++         |++++|........     ...+++++.+|+.+..     +.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~   90 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHE---------VTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YI   90 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCE---------EEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hc
Confidence            36789999999999999999999999999         99999864321110     1235789999998753     57


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC---CCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA---WPA  172 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~---~~~  172 (366)
                      ++|+|||+|+.... .....++...+++|+.++.+++++|++.++   ||||+||.++||.....+.  .|+..   .+.
T Consensus        91 ~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~v~g~~~~~~~--~E~~~~~~~~~  164 (343)
T 2b69_A           91 EVDQIYHLASPASP-PNYMYNPIKTLKTNTIGTLNMLGLAKRVGA---RLLLASTSEVYGDPEVHPQ--SEDYWGHVNPI  164 (343)
T ss_dssp             CCSEEEECCSCCSH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHTC---EEEEEEEGGGGBSCSSSSB--CTTCCCBCCSS
T ss_pred             CCCEEEECccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---cEEEECcHHHhCCCCCCCC--cccccccCCCC
Confidence            89999999996542 122346677889999999999999999875   7999999999997654442  55432   355


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-------------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-------------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                      .|.+.|+.+|+++|.++..++.+++++++++|+.             .+..++..++. +.++.+++++.+.++++|++|
T Consensus       165 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D  243 (343)
T 2b69_A          165 GPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYVSD  243 (343)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHH-TCCEEEESSSCCEEECEEHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHc-CCCceEcCCCCeEEeeEeHHH
Confidence            6778899999999999999988889999998642             23456666666 677778888889999999999


Q ss_pred             HHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccChHHHHHHcCCCCCCCHHHHH
Q 044498          240 CVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDDTLINEELGWAPTMKQKDEL  318 (366)
Q Consensus       240 ~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~k~~~~lG~~p~~~~~e~l  318 (366)
                      +|++++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+.++...|... .......|++|++++|||.|+++++++|
T Consensus       244 va~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l  323 (343)
T 2b69_A          244 LVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGL  323 (343)
T ss_dssp             HHHHHHHHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHH
T ss_pred             HHHHHHHHHhcCCCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHH
Confidence            999999999887789999999999999999999999999887665555432 3345678999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 044498          319 RITYFWIKEQVEKEK  333 (366)
Q Consensus       319 ~~~~~~~~~~~~~~~  333 (366)
                      +++++||+++.....
T Consensus       324 ~~~~~~~~~~~~~~~  338 (343)
T 2b69_A          324 NKAIHYFRKELEYQA  338 (343)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999998765443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.9e-40  Score=308.92  Aligned_cols=290  Identities=19%  Similarity=0.214  Sum_probs=232.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCCh-hHHHhhhcCCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVM-DNCLRMTSGVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~-~~l~~~~~~~d~v  100 (366)
                      |+|||||||||||++++++|+++ |++         |++++|........ ...+++++.+|+++. +.+.++++++|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~v   71 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYE---------VYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVV   71 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCE---------EEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCE---------EEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEE
Confidence            58999999999999999999998 899         99999976543221 234578999999984 5688888899999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC----C-CCCC
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW----P-AEPQ  175 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~----~-~~p~  175 (366)
                      ||+|+.... .....++...+++|+.++.++++++++.+ +  ||||+||.++||.....+.  .|+...    + ..|.
T Consensus        72 ih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--~~v~~SS~~v~g~~~~~~~--~e~~~~~~~~~~~~~~  145 (345)
T 2bll_A           72 LPLVAIATP-IEYTRNPLRVFELDFEENLRIIRYCVKYR-K--RIIFPSTSEVYGMCSDKYF--DEDHSNLIVGPVNKPR  145 (345)
T ss_dssp             EECBCCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-C--EEEEECCGGGGBTCCCSSB--CTTTCCCBCCCTTCGG
T ss_pred             EEcccccCc-cchhcCHHHHHHHHHHHHHHHHHHHHHhC-C--eEEEEecHHHcCCCCCCCc--CCcccccccCcccCcc
Confidence            999996542 12234667788999999999999999988 7  9999999999997654432  554421    1 1356


Q ss_pred             CchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc-------------------HHHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          176 DAYGLEKLATEGLCKHYTKDFEIECRLVGEKA-------------------PAAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~-------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                      +.|+.+|+.+|.+++.++.+++++++++|+..                   +..++..+.. +.++.+++++.+.++|+|
T Consensus       146 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~  224 (345)
T 2bll_A          146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTD  224 (345)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH-TCCEEEGGGSCCEEECEE
T ss_pred             cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHc-CCCcEEECCCCEEEEEEE
Confidence            68999999999999999888899999996432                   3455666665 677788888889999999


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC-cccHHHHHHHHHHhcCCCCCCCcCCCC----------------CCCccc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE-MVSINEMAEIILSFENEKLPIHPIPGP----------------EGVRGR  295 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~----------------~~~~~~  295 (366)
                      ++|+|++++.+++.+    .+++||+++++ .+|+.|+++.+.+.+|.+......|..                ......
T Consensus       225 v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (345)
T 2bll_A          225 IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHR  304 (345)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCC
T ss_pred             HHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhh
Confidence            999999999999764    46799999986 899999999999999876543333321                112345


Q ss_pred             ccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          296 NSDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       296 ~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ..|++|++++|||.|+++++++|+++++||+++.
T Consensus       305 ~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  338 (345)
T 2bll_A          305 KPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (345)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             cccHHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence            7899999999999999999999999999998764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-40  Score=307.78  Aligned_cols=296  Identities=21%  Similarity=0.272  Sum_probs=234.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhcC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ||+|||||||||||++|+++|+++|++         |++++|.......      ....+++++.+|++|.+.+.+++++
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~   71 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGID---------LIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK   71 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCE---------EEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc
Confidence            579999999999999999999999999         9999885321110      0112478999999999999999887


Q ss_pred             --CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC-CceeEEEEecccccCCCCCCCCC----------
Q 044498           97 --VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV-MSLTFFFVSSACIYPEFKQLDTD----------  163 (366)
Q Consensus        97 --~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~r~I~~SS~~vyg~~~~~~~~----------  163 (366)
                        +|+|||+|+.... .....++...+++|+.++.++++++.+.++ +  ||||+||.++||.....+..          
T Consensus        72 ~~~d~vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~--~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~  148 (347)
T 1orr_A           72 YMPDSCFHLAGQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC--NIIYSSTNKVYGDLEQYKYNETETRYTCVD  148 (347)
T ss_dssp             HCCSEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTC--EEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred             cCCCEEEECCcccCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCc--eEEEeccHHHhCCCCcCCcccccccccccc
Confidence              9999999996531 122346677899999999999999999886 4  89999999999976543310          


Q ss_pred             --cccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC--------------cHHHHHHHHHhCCC----CeE
Q 044498          164 --VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK--------------APAAFSRKAVTSTD----NFE  223 (366)
Q Consensus       164 --~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~--------------~~~~~~~~~~~~~~----~~~  223 (366)
                        ...++..+..|.+.|+.+|+++|.+++.++.+++++++++|+.              .+..++..++.+..    ++.
T Consensus       149 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (347)
T 1orr_A          149 KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFT  228 (347)
T ss_dssp             CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEE
T ss_pred             cccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeE
Confidence              0012223566889999999999999999998889999998633              23445555555222    677


Q ss_pred             EecCCcceeeeeeHHHHHHHHHHHHhc---CCCCcEEecCCC--cccHHHHHHHHHHhcCCCCCCCcCCCCC-CCccccc
Q 044498          224 MWGDGKQTRSLTFIDECVEGVLRLIKS---DFREPLNIGSDE--MVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNS  297 (366)
Q Consensus       224 i~~~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~  297 (366)
                      +++++.+.++|+|++|+|++++.+++.   ..+++||++++.  ++|+.|+++.+.+.+|.+.++...|.+. ......+
T Consensus       229 ~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  308 (347)
T 1orr_A          229 ISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVA  308 (347)
T ss_dssp             EESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECB
T ss_pred             EecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeec
Confidence            788999999999999999999999975   257899999887  5999999999999999887665555432 2344678


Q ss_pred             ChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          298 DDTLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       298 ~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      |++|++++|||.|+++++++|+++++|++++..
T Consensus       309 d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  341 (347)
T 1orr_A          309 DIKKITNAIDWSPKVSAKDGVQKMYDWTSSILE  341 (347)
T ss_dssp             CCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998763

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-40  Score=308.39  Aligned_cols=294  Identities=18%  Similarity=0.157  Sum_probs=230.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----ccc-------ccccceEEEccCCChhHHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----MME-------DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~~~-------~~~~v~~~~~D~~~~~~l~   91 (366)
                      ||+|||||||||||++++++|+++|++         |++++|.....    ...       ...++.++.+|+++.+++.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   71 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYE---------VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLT   71 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECC---------------------CCEEECCCCSSCHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHH
Confidence            578999999999999999999999999         99999875431    110       0235688999999999999


Q ss_pred             hhhcC--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC---CceeEEEEecccccCCCCCCCCCccc
Q 044498           92 RMTSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV---MSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        92 ~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~---~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                      +++++  +|+|||+|+.... .....++...+++|+.++.++++++.+.++   +  +|||+||.++||.....+.  .|
T Consensus        72 ~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~iv~~SS~~v~g~~~~~~~--~E  146 (372)
T 1db3_A           72 RILREVQPDEVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKT--RFYQASTSELYGLVQEIPQ--KE  146 (372)
T ss_dssp             HHHHHHCCSEEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTC--EEEEEEEGGGGTTCCSSSB--CT
T ss_pred             HHHHhcCCCEEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCc--EEEEeCChhhhCCCCCCCC--Cc
Confidence            88874  8999999997542 223345667789999999999999999987   7  9999999999997654432  55


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC----------cH----HHHHHHHHhCCCCeEEecCCccee
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK----------AP----AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~----------~~----~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      +.  +..|.+.|+.+|+++|.+++.++.+++++++++|..          ..    ..++..+..+......++++++.+
T Consensus       147 ~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (372)
T 1db3_A          147 TT--PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (372)
T ss_dssp             TS--CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             cC--CCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCcee
Confidence            54  777899999999999999999999889998877521          12    233444444223445568888999


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCc---------------------------
Q 044498          233 SLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP---------------------------  285 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~---------------------------  285 (366)
                      +|+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+.++..                           
T Consensus       225 ~~i~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  304 (372)
T 1db3_A          225 DWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVII  304 (372)
T ss_dssp             CCEEHHHHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEE
T ss_pred             eeeEHHHHHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCccccccccccccccccccccccccccccccee
Confidence            99999999999999998877799999999999999999999999997543210                           


Q ss_pred             --CC---CCCCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 044498          286 --IP---GPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKE  332 (366)
Q Consensus       286 --~~---~~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~  332 (366)
                        .+   .+........|++|++++|||.|+++++++|+++++||+++....
T Consensus       305 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  356 (372)
T 1db3_A          305 AVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKH  356 (372)
T ss_dssp             EECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhcc
Confidence              01   111223456799999999999999999999999999999987543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=6.2e-40  Score=307.26  Aligned_cols=295  Identities=17%  Similarity=0.158  Sum_probs=234.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ++|+|||||||||||++|+++|+++|++         |++++|........     ...++.++.+|+++.+.+.+++++
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   78 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGAT---------VKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE   78 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCe---------EEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHh
Confidence            4679999999999999999999999999         99999976543221     123578999999999999998875


Q ss_pred             --CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498           97 --VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus        97 --~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                        +|+|||+|+... ......++...+.+|+.++.++++++.+.+ ++  +|||+||.++||..... .++.|+.  +..
T Consensus        79 ~~~d~vih~A~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~--~~v~~SS~~vyg~~~~~-~~~~E~~--~~~  152 (357)
T 1rkx_A           79 FQPEIVFHMAAQPL-VRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK--AVVNITSDKCYDNKEWI-WGYRENE--AMG  152 (357)
T ss_dssp             HCCSEEEECCSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCC--EEEEECCGGGBCCCCSS-SCBCTTS--CBC
T ss_pred             cCCCEEEECCCCcc-cccchhCHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEecCHHHhCCCCcC-CCCCCCC--CCC
Confidence              999999999532 112345667789999999999999999886 88  99999999999976532 1124443  667


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHc---------CCcEEEeCCC------------cHHHHHHHHHhCCCCeEEecCCccee
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDF---------EIECRLVGEK------------APAAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~---------~~~~~i~r~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      |.+.|+.+|+++|.+++.++.++         +++++++|+.            .+..++..+.. +..+.+ +++.+.+
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~-g~~~~~-~~~~~~~  230 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQ-SQPVII-RNPHAIR  230 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHT-TCCEEC-SCTTCEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhc-CCCEEE-CCCCCee
Confidence            88999999999999999998765         8999999643            23455555554 566655 4567889


Q ss_pred             eeeeHHHHHHHHHHHHhc------CCCCcEEecCC--CcccHHHHHHHHHHhcCCCCCCCcCCC--CCCCcccccChHHH
Q 044498          233 SLTFIDECVEGVLRLIKS------DFREPLNIGSD--EMVSINEMAEIILSFENEKLPIHPIPG--PEGVRGRNSDDTLI  302 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~------~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~k~  302 (366)
                      +|+|++|+|++++.+++.      ..+++||++++  +.+|+.|+++.+.+.+|.+..+...+.  +.......+|++|+
T Consensus       231 ~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~  310 (357)
T 1rkx_A          231 PWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKA  310 (357)
T ss_dssp             CCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHH
T ss_pred             ccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHH
Confidence            999999999999998874      35789999974  689999999999999998766544432  22344567899999


Q ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 044498          303 NEELGWAPTMKQKDELRITYFWIKEQVEKEK  333 (366)
Q Consensus       303 ~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~  333 (366)
                      +++|||.|+++++++|+++++||+++.....
T Consensus       311 ~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~  341 (357)
T 1rkx_A          311 KMQLGWHPRWNLNTTLEYIVGWHKNWLSGTD  341 (357)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHhCCCcCCcHHHHHHHHHHHHHHHhcCCc
Confidence            9999999999999999999999998875443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.9e-40  Score=304.81  Aligned_cols=283  Identities=18%  Similarity=0.277  Sum_probs=226.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d   98 (366)
                      +|+|||||||||||++|+++|+++  |++         |++++|......  ...+++++.+|++|.+.+.++++  ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~---------V~~~~r~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d   70 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTEN---------VIASDIRKLNTD--VVNSGPFEVVNALDFNQIEHLVEVHKIT   70 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGG---------EEEEESCCCSCH--HHHSSCEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCE---------EEEEcCCCcccc--ccCCCceEEecCCCHHHHHHHHhhcCCC
Confidence            478999999999999999999999  899         999998765422  12356899999999999999988  899


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCch
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAY  178 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y  178 (366)
                      +|||+|+....  ....++...+++|+.++.++++++++.+++  ||||+||.++|+...... +..|+  .+..|.+.|
T Consensus        71 ~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~SS~~~~~~~~~~~-~~~e~--~~~~~~~~Y  143 (312)
T 2yy7_A           71 DIYLMAALLSA--TAEKNPAFAWDLNMNSLFHVLNLAKAKKIK--KIFWPSSIAVFGPTTPKE-NTPQY--TIMEPSTVY  143 (312)
T ss_dssp             EEEECCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHTTSCS--EEECCEEGGGCCTTSCSS-SBCSS--CBCCCCSHH
T ss_pred             EEEECCccCCC--chhhChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEeccHHHhCCCCCCC-Ccccc--CcCCCCchh
Confidence            99999996532  223566778999999999999999999998  999999999998754321 12343  367889999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEeCCCc---------------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          179 GLEKLATEGLCKHYTKDFEIECRLVGEKA---------------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       179 ~~sK~~~E~~l~~~~~~~~~~~~i~r~~~---------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      +.+|+++|.+++.++.+++++++++|+..               +..++...+. +.++.+++++.+.++|+|++|+|++
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a  222 (312)
T 2yy7_A          144 GISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIA-DKKYECFLSSETKMPMMYMDDAIDA  222 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHH-TSEEEESSCTTCCEEEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHc-CCCeEEecCCCceeeeeeHHHHHHH
Confidence            99999999999999888899998886321               2233334444 3456677888889999999999999


Q ss_pred             HHHHHhcCC-----CCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC----CCcccccChHHHHHHcCCCCCCCH
Q 044498          244 VLRLIKSDF-----REPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE----GVRGRNSDDTLINEELGWAPTMKQ  314 (366)
Q Consensus       244 ~~~~l~~~~-----~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~~~k~~~~lG~~p~~~~  314 (366)
                      ++.+++++.     +++||+++ +.+|+.|+++.+.+.+|. ..+.+.|...    ......+|++|++++|||.|++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l  300 (312)
T 2yy7_A          223 TINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDL  300 (312)
T ss_dssp             HHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCH
T ss_pred             HHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCccccccccccccCCHHHHHHHcCCCCCCCH
Confidence            999998752     38999986 889999999999999983 3333333211    112246799999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 044498          315 KDELRITYFWIK  326 (366)
Q Consensus       315 ~e~l~~~~~~~~  326 (366)
                      +++|+++++||+
T Consensus       301 ~~~l~~~~~~~k  312 (312)
T 2yy7_A          301 ESMTKDMIEHLS  312 (312)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999999985

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=2.9e-40  Score=304.92  Aligned_cols=281  Identities=23%  Similarity=0.386  Sum_probs=231.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      ++|+|||||||||||++|+++|+++|++         |++++|..              .+|+++.+.+.++++  ++|+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---------v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~   58 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDV---------ELVLRTRD--------------ELNLLDSRAVHDFFASERIDQ   58 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTE---------EEECCCTT--------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCe---------EEEEecCc--------------cCCccCHHHHHHHHHhcCCCE
Confidence            3578999999999999999999999999         99987652              379999999999998  9999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC--CCCCC-C
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW--PAEPQ-D  176 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~--~~~p~-~  176 (366)
                      |||+|+..........++...+++|+.++.++++++++.+++  ||||+||.++||.....+.  .|+...  +..|. +
T Consensus        59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~SS~~vyg~~~~~~~--~E~~~~~~~~~p~~~  134 (321)
T 1e6u_A           59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN--KLLFLGSSCIYPKLAKQPM--AESELLQGTLEPTNE  134 (321)
T ss_dssp             EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEECCGGGSCTTCCSSB--CGGGTTSSCCCGGGH
T ss_pred             EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEccHHHcCCCCCCCc--CccccccCCCCCCCC
Confidence            999999754222234567778999999999999999999999  9999999999997655443  555421  34454 5


Q ss_pred             chHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHh---CC-CCeEEecCCcceeeeeeH
Q 044498          177 AYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVT---ST-DNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       177 ~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~---~~-~~~~i~~~~~~~~~~i~v  237 (366)
                      .|+.+|+.+|.+++.++.+++++++++|+.               .+..++..+..   .+ .++.+++++.+.++|+|+
T Consensus       135 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v  214 (321)
T 1e6u_A          135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV  214 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEH
Confidence            899999999999999998889999998532               23455555543   13 567778888999999999


Q ss_pred             HHHHHHHHHHHhcCC----------CCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChHHHHHHc
Q 044498          238 DECVEGVLRLIKSDF----------REPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDTLINEEL  306 (366)
Q Consensus       238 ~D~a~~~~~~l~~~~----------~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~k~~~~l  306 (366)
                      +|+|++++.+++++.          +++||+++++++|+.|+++.+.+.+|.+..+...+.+ .......+|++|+++ |
T Consensus       215 ~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-l  293 (321)
T 1e6u_A          215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ-L  293 (321)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHH-T
T ss_pred             HHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHHh-c
Confidence            999999999998752          5899999999999999999999999987665554432 334556889999999 9


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          307 GWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       307 G~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      ||.|+++++++|+++++||+++..
T Consensus       294 G~~p~~~~~~~l~~~~~~~~~~~~  317 (321)
T 1e6u_A          294 GWYHEISLEAGLASTYQWFLENQD  317 (321)
T ss_dssp             TCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred             CCccCCcHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-39  Score=302.95  Aligned_cols=282  Identities=14%  Similarity=0.147  Sum_probs=223.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++|+|||||||||||++++++|+++|++         |++++|+..........+++++.+|++|.+.+.++++++|+||
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   82 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHD---------LVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVI   82 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEE
Confidence            4569999999999999999999999999         9999998664433233367999999999999999999999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC----CCc
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP----QDA  177 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p----~~~  177 (366)
                      |+|+...   .+..++...+++|+.++.++++++.+.+++  ||||+||.++|+.......  . +|+.+..|    .+.
T Consensus        83 h~a~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~--~~v~~SS~~~~~~~~~~~~--~-~E~~~~~p~~~~~~~  154 (342)
T 2x4g_A           83 FSAGYYP---SRPRRWQEEVASALGQTNPFYAACLQARVP--RILYVGSAYAMPRHPQGLP--G-HEGLFYDSLPSGKSS  154 (342)
T ss_dssp             EC---------------CHHHHHHHHHHHHHHHHHHHTCS--CEEEECCGGGSCCCTTSSC--B-CTTCCCSSCCTTSCH
T ss_pred             ECCccCc---CCCCCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEECCHHhhCcCCCCCC--C-CCCCCCCccccccCh
Confidence            9999653   334567788999999999999999999998  9999999999987654222  2 33347777    889


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEeCCCc----------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHH
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLVGEKA----------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL  247 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~  247 (366)
                      |+.+|+++|.+++.++.. +++++++|+..          +..++..+.. +....+   +++.++++|++|+|++++.+
T Consensus       155 Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~i~v~Dva~~~~~~  229 (342)
T 2x4g_A          155 YVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVITAIGN-GEMTHY---VAGQRNVIDAAEAGRGLLMA  229 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHHHHHT-TCCCEE---ECCEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHHHHHc-CCCccc---cCCCcceeeHHHHHHHHHHH
Confidence            999999999999998877 99999986321          4455655554 555444   45778999999999999999


Q ss_pred             HhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC------------------------C----CCcccccC
Q 044498          248 IKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP------------------------E----GVRGRNSD  298 (366)
Q Consensus       248 l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~------------------------~----~~~~~~~~  298 (366)
                      ++++ .+++||+++++ +|+.|+++.+.+.+|.+.++ ..|..                        .    ......+|
T Consensus       230 ~~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  307 (342)
T 2x4g_A          230 LERGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLD  307 (342)
T ss_dssp             HHHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBC
T ss_pred             HhCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccC
Confidence            9875 37899999999 99999999999999987654 33321                        0    01345689


Q ss_pred             hHHHHHHcCC-CCCCCHHHHHHHHHHHHHHH
Q 044498          299 DTLINEELGW-APTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       299 ~~k~~~~lG~-~p~~~~~e~l~~~~~~~~~~  328 (366)
                      ++|++++||| .| ++++++|+++++||+++
T Consensus       308 ~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~  337 (342)
T 2x4g_A          308 GRKAREELGFFST-TALDDTLLRAIDWFRDN  337 (342)
T ss_dssp             CHHHHHHHCCCCC-SCHHHHHHHHHHHHHHT
T ss_pred             hHHHHHhCCCCCC-CCHHHHHHHHHHHHHHc
Confidence            9999999999 99 89999999999999876

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=5.8e-40  Score=311.74  Aligned_cols=292  Identities=16%  Similarity=0.236  Sum_probs=233.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHH-HcCCCCCCCCCccEEEEEeCCCccc--------cccc------------ccc---ce
Q 044498           23 KLRISSIGVGGFIPSNIARRLK-SERHYSTSIPNALYIIASDWNKNEH--------MMED------------MFC---HE   78 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~-~~g~~~~~~~~~~~V~~~~r~~~~~--------~~~~------------~~~---v~   78 (366)
                      +|+|||||||||||++|+++|+ ++|++         |++++|.....        ....            ..+   +.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHS---------VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAA   72 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCE---------EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCE---------EEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEE
Confidence            3699999999999999999999 99999         99999875432        1000            113   78


Q ss_pred             EEEccCCChhHHHhhhc--C-CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           79 FHLVDLRVMDNCLRMTS--G-VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        79 ~~~~D~~~~~~l~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      ++.+|+++.+.+.++++  + +|+|||+|+.... .....++...+++|+.++.++++++++.+++  +|||+||.++||
T Consensus        73 ~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~--~iv~~SS~~v~g  149 (397)
T 1gy8_A           73 LEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLLHKCD--KIIFSSSAAIFG  149 (397)
T ss_dssp             EEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGTB
T ss_pred             EEECCCCCHHHHHHHHHhcCCCCEEEECCCccCc-CcchhhHHHHHHHHhHHHHHHHHHHHHhCCC--EEEEECCHHHhC
Confidence            99999999999998887  6 9999999996532 1123466778999999999999999999998  999999999998


Q ss_pred             CCC-------CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc--------------------H
Q 044498          156 EFK-------QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA--------------------P  208 (366)
Q Consensus       156 ~~~-------~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~--------------------~  208 (366)
                      ...       ..+  +.|+.  +..|.+.|+.+|+++|.+++.++.+++++++++|+..                    +
T Consensus       150 ~~~~~~~~~~~~~--~~E~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~  225 (397)
T 1gy8_A          150 NPTMGSVSTNAEP--IDINA--KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLI  225 (397)
T ss_dssp             SCCC-----CCCC--BCTTS--CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHH
T ss_pred             CCCcccccccccC--cCccC--CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHH
Confidence            765       232  35544  6788999999999999999999998899999986421                    1


Q ss_pred             HHHH----HHHHhCC-----------CCeEEec------CCcceeeeeeHHHHHHHHHHHHhcC--CC--------CcEE
Q 044498          209 AAFS----RKAVTST-----------DNFEMWG------DGKQTRSLTFIDECVEGVLRLIKSD--FR--------EPLN  257 (366)
Q Consensus       209 ~~~~----~~~~~~~-----------~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~--~~--------~~~~  257 (366)
                      ..++    .++..+.           .++.+++      ++.+.++|+|++|+|++++.+++.+  .+        ++||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~n  305 (397)
T 1gy8_A          226 PIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFN  305 (397)
T ss_dssp             HHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEE
T ss_pred             HHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEE
Confidence            2222    1333322           2567776      6788899999999999999998753  23        7999


Q ss_pred             ecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccChHHHHHHcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 044498          258 IGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDDTLINEELGWAPTM-KQKDELRITYFWIKEQVE  330 (366)
Q Consensus       258 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~k~~~~lG~~p~~-~~~e~l~~~~~~~~~~~~  330 (366)
                      +++++++|+.|+++.|.+.+|.+.++...+.+. ......+|++|++++|||.|++ +++++|+++++||+++..
T Consensus       306 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~  380 (397)
T 1gy8_A          306 LGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPN  380 (397)
T ss_dssp             ESCSCCEEHHHHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTT
T ss_pred             eCCCCcccHHHHHHHHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhccc
Confidence            999999999999999999999877665554332 3445688999999999999999 999999999999998743

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.3e-39  Score=302.63  Aligned_cols=290  Identities=20%  Similarity=0.229  Sum_probs=227.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      |+|||||||||||++++++|+++|++         |++++|........       ...++.++.+|+++.+.+.++++ 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   71 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHD---------VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD   71 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc
Confidence            58999999999999999999999999         99998653321110       12246889999999999988886 


Q ss_pred             -CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                       ++|+|||+||.... .....++...+++|+.++.++++++++.+++  +|||+||.++||.....+  +.|+.  +..|
T Consensus        72 ~~~D~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~iv~~SS~~~~g~~~~~~--~~e~~--~~~~  144 (338)
T 1udb_A           72 HAIDTVIHFAGLKAV-GESVQKPLEYYDNNVNGTLRLISAMRAANVK--NFIFSSSATVYGDNPKIP--YVESF--PTGT  144 (338)
T ss_dssp             TTCSEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEGGGGCSCCSSS--BCTTS--CCCC
T ss_pred             cCCCEEEECCccCcc-ccchhcHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEccHHHhCCCCCCC--cCccc--CCCC
Confidence             59999999996531 1223455677899999999999999999988  999999999998765443  24443  4444


Q ss_pred             -CCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCC---------------------cHHHHHHHHHhCCCCeEEec-----
Q 044498          175 -QDAYGLEKLATEGLCKHYTKDF-EIECRLVGEK---------------------APAAFSRKAVTSTDNFEMWG-----  226 (366)
Q Consensus       175 -~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~---------------------~~~~~~~~~~~~~~~~~i~~-----  226 (366)
                       .+.|+.+|+++|.+++.++.++ +++++++|+.                     .+..+...+...+..+.+++     
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  224 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccC
Confidence             7899999999999999998886 7999888621                     12222332332345566655     


Q ss_pred             -CCcceeeeeeHHHHHHHHHHHHhcC---C-CCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccChH
Q 044498          227 -DGKQTRSLTFIDECVEGVLRLIKSD---F-REPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDDT  300 (366)
Q Consensus       227 -~~~~~~~~i~v~D~a~~~~~~l~~~---~-~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~  300 (366)
                       ++.+.++|+|++|+|++++.+++..   . +++||+++++.+|+.|+++.+.+.+|.+.++...+.+. ......+|++
T Consensus       225 ~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~  304 (338)
T 1udb_A          225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADAS  304 (338)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCH
T ss_pred             CCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCchhhhhcCHH
Confidence             4678899999999999999998752   2 37999999999999999999999999876655554433 3345678999


Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          301 LINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       301 k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      |++++|||.|+++++++|+++++|++++.
T Consensus       305 k~~~~lG~~p~~~l~~~l~~~~~w~~~~~  333 (338)
T 1udb_A          305 KADRELNWRVTRTLDEMAQDTWHWQSRHP  333 (338)
T ss_dssp             HHHHHHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHHcCCCcCCCHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=2.4e-39  Score=301.46  Aligned_cols=294  Identities=16%  Similarity=0.145  Sum_probs=231.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--c----ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--E----DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~----~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|+|||||||||||++++++|+++|++         |++++|.......  .    ...+++++.+|++|.+++.++++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYE---------VYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIE   72 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHH
Confidence            4579999999999999999999999999         9999997654211  0    11256889999999999998887


Q ss_pred             C--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC-CceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498           96 G--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV-MSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus        96 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                      +  +|+|||+|+... ...+..++...+++|+.++.++++++.+.++ +  +|||+||.++||.....+.  .|+.  +.
T Consensus        73 ~~~~d~vih~A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~--~iv~~SS~~vyg~~~~~~~--~e~~--~~  145 (345)
T 2z1m_A           73 KVQPDEVYNLAAQSF-VGVSFEQPILTAEVDAIGVLRILEALRTVKPDT--KFYQASTSEMFGKVQEIPQ--TEKT--PF  145 (345)
T ss_dssp             HHCCSEEEECCCCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTC--EEEEEEEGGGGCSCSSSSB--CTTS--CC
T ss_pred             hcCCCEEEECCCCcc-hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCc--eEEEEechhhcCCCCCCCC--CccC--CC
Confidence            4  799999999653 1123456677899999999999999998886 7  9999999999998765442  4543  67


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeC------CC----cHHH----HHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKDFEIECRLVG------EK----APAA----FSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r------~~----~~~~----~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                      .|.+.|+.+|+++|.+++.++.+++++++++|      +.    ....    ++..+..+.....+++++.+.++++|++
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  225 (345)
T 2z1m_A          146 YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAP  225 (345)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHH
Confidence            78899999999999999999998888876663      21    2222    2333334223334567888889999999


Q ss_pred             HHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC-------------------cCC---CCCCCcccc
Q 044498          239 ECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIH-------------------PIP---GPEGVRGRN  296 (366)
Q Consensus       239 D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~---~~~~~~~~~  296 (366)
                      |+|++++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+.++.                   ..+   .+.......
T Consensus       226 Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (345)
T 2z1m_A          226 EYVEAMWLMMQQPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILV  305 (345)
T ss_dssp             HHHHHHHHHHTSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCC
T ss_pred             HHHHHHHHHHhCCCCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceee
Confidence            9999999999887779999999999999999999999999874321                   111   111223456


Q ss_pred             cChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 044498          297 SDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK  331 (366)
Q Consensus       297 ~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~  331 (366)
                      .|++|++++|||.|+++++++|+++++|++++...
T Consensus       306 ~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  340 (345)
T 2z1m_A          306 GNPEKAMKKLGWKPRTTFDELVEIMMEADLKRVRD  340 (345)
T ss_dssp             BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHC
T ss_pred             cCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHhcc
Confidence            79999999999999999999999999999998643

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=2.7e-40  Score=300.36  Aligned_cols=269  Identities=14%  Similarity=0.095  Sum_probs=220.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC-CCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG-VDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~-~d~v  100 (366)
                      +||+||||| +||||++|+++|+++|++         |++++|+....    ..+++++.+|++|.+.+.+++++ +|+|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~v   67 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHE---------VTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEIL   67 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCC---------EEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCE---------EEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEE
Confidence            467999999 599999999999999999         99999986542    24579999999999999998887 9999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      ||+|+..      ..++...+++|+.++.++++++++.+++  ||||+||.++||.....+.  .|+.  +..|.+.|+.
T Consensus        68 ih~a~~~------~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~~v~~SS~~vyg~~~~~~~--~E~~--~~~p~~~Y~~  135 (286)
T 3gpi_A           68 VYCVAAS------EYSDEHYRLSYVEGLRNTLSALEGAPLQ--HVFFVSSTGVYGQEVEEWL--DEDT--PPIAKDFSGK  135 (286)
T ss_dssp             EECHHHH------HHC-----CCSHHHHHHHHHHTTTSCCC--EEEEEEEGGGCCCCCSSEE--CTTS--CCCCCSHHHH
T ss_pred             EEeCCCC------CCCHHHHHHHHHHHHHHHHHHHhhCCCC--EEEEEcccEEEcCCCCCCC--CCCC--CCCCCChhhH
Confidence            9999953      3567778899999999999999999999  9999999999998765542  5554  7889999999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEeCCCcH-----HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhc----C
Q 044498          181 EKLATEGLCKHYTKDFEIECRLVGEKAP-----AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS----D  251 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~~~~i~r~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~----~  251 (366)
                      +|+++|.+ ..+     ++++++|+..+     ..++..+..  ..  ..+++.+.++|+|++|+|+++..++++    .
T Consensus       136 sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~--~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  205 (286)
T 3gpi_A          136 RMLEAEAL-LAA-----YSSTILRFSGIYGPGRLRMIRQAQT--PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSHAV  205 (286)
T ss_dssp             HHHHHHHH-GGG-----SSEEEEEECEEEBTTBCHHHHHTTC--GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHH-Hhc-----CCeEEEecccccCCCchhHHHHHHh--cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhccCC
Confidence            99999998 543     88888875432     235554443  22  236778889999999999999999987    3


Q ss_pred             CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHHHHHcCCCCCC-CHHHHHHHHHHHHHHHH
Q 044498          252 FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTM-KQKDELRITYFWIKEQV  329 (366)
Q Consensus       252 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~-~~~e~l~~~~~~~~~~~  329 (366)
                      .+++||+++++.+|+.|+++.+.+.+|.+.++...+  .......+|++|++ +|||.|++ +++++|+++++|+....
T Consensus       206 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~~  281 (286)
T 3gpi_A          206 PERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP--PVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREGH  281 (286)
T ss_dssp             CCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC--CBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC--
T ss_pred             CCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc--ccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhccc
Confidence            689999999999999999999999999887665544  34456678999997 89999999 69999999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=7.6e-39  Score=300.16  Aligned_cols=294  Identities=18%  Similarity=0.273  Sum_probs=233.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCcc-c-ccc----ccccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNE-H-MME----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~-~-~~~----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      |+|||||||||||++|+++|++. |++         |++++|.... . ...    ...+++++.+|+++.+.+.++++ 
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   71 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDT---------VVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ   71 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCE---------EEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCe---------EEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhh
Confidence            57999999999999999999998 799         9999986521 1 111    12357899999999999999987 


Q ss_pred             -CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc--CCC-----ceeEEEEecccccCCCCCCC------
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN--GVM-----SLTFFFVSSACIYPEFKQLD------  161 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~-----~~r~I~~SS~~vyg~~~~~~------  161 (366)
                       ++|+|||+|+... ......++...+++|+.++.++++++.+.  +++     ..||||+||.++||......      
T Consensus        72 ~~~d~vih~A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           72 YQPDAVMHLAAESH-VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             HCCSEEEECCSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             cCCCEEEECCCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence             8999999999653 11233566778999999999999999987  652     12899999999998754210      


Q ss_pred             --CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-----------cHHHHHHHHHhCCCCeEEecCC
Q 044498          162 --TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-----------APAAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       162 --~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-----------~~~~~~~~~~~~~~~~~i~~~~  228 (366)
                        .++.|+.  +..|.+.|+.+|+++|.+++.++.+++++++++|+.           .+..++..+.. +.++.+++++
T Consensus       151 ~~~~~~E~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  227 (361)
T 1kew_A          151 TLPLFTETT--AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE-GKPLPIYGKG  227 (361)
T ss_dssp             CCCCBCTTS--CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHH-TCCEEEETTS
T ss_pred             cCCCCCCCC--CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHc-CCCceEcCCC
Confidence              0124543  677899999999999999999998889999999643           23455666665 6677888888


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC--------cCCCC-CCCcccccC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIH--------PIPGP-EGVRGRNSD  298 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~--------~~~~~-~~~~~~~~~  298 (366)
                      .+.++++|++|+|++++.+++.+ .+++||+++++.+|+.|+++.+.+.+|.+.+..        ..+.+ .......+|
T Consensus       228 ~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d  307 (361)
T 1kew_A          228 DQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAID  307 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBC
T ss_pred             ceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecC
Confidence            89999999999999999999775 578999999999999999999999988653211        11211 122345789


Q ss_pred             hHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          299 DTLINEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       299 ~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      ++|++++|||.|+++++++|+++++||+++..
T Consensus       308 ~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  339 (361)
T 1kew_A          308 AGKISRELGWKPLETFESGIRKTVEWYLANTQ  339 (361)
T ss_dssp             CHHHHHHHCCCCSCCHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHhCCCCccCHHHHHHHHHHHHHhccc
Confidence            99999999999999999999999999998643

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=8.2e-39  Score=302.28  Aligned_cols=295  Identities=15%  Similarity=0.143  Sum_probs=232.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----cccc-------cc-cceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----MMED-------MF-CHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~~~~-------~~-~v~~~~~D~~~~~~l~   91 (366)
                      ++|||||||||||++|+++|+++|++         |++++|.....    ....       .. ++.++.+|+++.+.+.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   99 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYE---------VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLR   99 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCE---------EEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHH
Confidence            68999999999999999999999999         99999876531    1110       11 5789999999999999


Q ss_pred             hhhcC--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC---ceeEEEEecccccCCCCCCCCCccc
Q 044498           92 RMTSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM---SLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        92 ~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~---~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                      +++++  +|+|||+|+.... .....++...+++|+.++.++++++.+.+++   ..+|||+||.++||.... +  +.|
T Consensus       100 ~~~~~~~~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~--~~E  175 (381)
T 1n7h_A          100 RWIDVIKPDEVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-P--QSE  175 (381)
T ss_dssp             HHHHHHCCSEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-S--BCT
T ss_pred             HHHHhcCCCEEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-C--CCC
Confidence            88874  7999999996531 1223466778999999999999999886531   128999999999998665 3  356


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC----------CcH----HHHHHHHHhCCCCeEEecCCccee
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE----------KAP----AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~----------~~~----~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      +.  +..|.+.|+.+|+++|.++..++.+++++++++|.          ...    ..++..+..+......++++.+.+
T Consensus       176 ~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  253 (381)
T 1n7h_A          176 TT--PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASR  253 (381)
T ss_dssp             TS--CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEE
T ss_pred             CC--CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCcee
Confidence            54  67889999999999999999999888988776641          122    233444444333344568888999


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCC--CCcCC---CCCCCcccccChHHHHHHcC
Q 044498          233 SLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLP--IHPIP---GPEGVRGRNSDDTLINEELG  307 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~---~~~~~~~~~~~~~k~~~~lG  307 (366)
                      +|+|++|+|++++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+..  +.+.+   .+.......+|++|++++||
T Consensus       254 ~~v~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  333 (381)
T 1n7h_A          254 DWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLG  333 (381)
T ss_dssp             ECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHC
T ss_pred             eeEEHHHHHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcC
Confidence            99999999999999998877799999999999999999999999997632  11211   12223445679999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhh
Q 044498          308 WAPTMKQKDELRITYFWIKEQVEKEK  333 (366)
Q Consensus       308 ~~p~~~~~e~l~~~~~~~~~~~~~~~  333 (366)
                      |.|+++++++|+++++||+++.....
T Consensus       334 ~~p~~~l~e~l~~~~~~~~~~~~~~~  359 (381)
T 1n7h_A          334 WKPQVGFEKLVKMMVDEDLELAKREK  359 (381)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHHHHhhccccc
Confidence            99999999999999999999876554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=4.8e-39  Score=306.03  Aligned_cols=295  Identities=17%  Similarity=0.157  Sum_probs=233.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----------------c------cccccce
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----------------M------EDMFCHE   78 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----------------~------~~~~~v~   78 (366)
                      .|++|||||||||||++|+++|+++|++         |++++|......                 .      ....+++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~   80 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYE---------VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIE   80 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCE
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCe---------EEEEEecCccccccccccccccccchhhhhhhhHhhccCCceE
Confidence            6789999999999999999999999999         999987543210                 0      0123578


Q ss_pred             EEEccCCChhHHHhhhcC--CCEEEEcccccCCccccccCcc---hhhhhhHHHHHHHHHHHHHcCC-CceeEEEEeccc
Q 044498           79 FHLVDLRVMDNCLRMTSG--VDNMSNLAADMGGMGFIQSNHS---VIMYKNTTISFDMLEAARMNGV-MSLTFFFVSSAC  152 (366)
Q Consensus        79 ~~~~D~~~~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~---~~~~~nv~~~~~ll~a~~~~~~-~~~r~I~~SS~~  152 (366)
                      ++.+|+++.+.+.+++++  +|+|||+||..... ....++.   ..+++|+.++.++++++++.++ +  +|||+||.+
T Consensus        81 ~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~--~~V~~SS~~  157 (404)
T 1i24_A           81 LYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEEC--HLVKLGTMG  157 (404)
T ss_dssp             EEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTC--EEEEECCGG
T ss_pred             EEECCCCCHHHHHHHHhccCCCEEEECCCCCCcc-chhhCccchhhhHHHHHHHHHHHHHHHHHhCCCc--EEEEeCcHH
Confidence            999999999999998886  99999999965421 1222332   3678999999999999999886 6  999999999


Q ss_pred             ccCCCCCCCCCccccc------------CCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC--------------
Q 044498          153 IYPEFKQLDTDVKESE------------AWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK--------------  206 (366)
Q Consensus       153 vyg~~~~~~~~~~e~~------------~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~--------------  206 (366)
                      +||.... +  +.|+.            ..+..|.+.|+.+|+++|.++..++.+++++++++|+.              
T Consensus       158 vyg~~~~-~--~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          158 EYGTPNI-D--IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGCCCSS-C--BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HhCCCCC-C--CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccc
Confidence            9987642 2  24431            13567889999999999999999988889999988532              


Q ss_pred             --------------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCC--C--CcEEecCCCcccHHH
Q 044498          207 --------------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF--R--EPLNIGSDEMVSINE  268 (366)
Q Consensus       207 --------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~--~~~~i~~~~~~s~~e  268 (366)
                                    .+..++..+.. +.++.+++++.+.++|+|++|+|++++.+++.+.  +  ++||+++ +++|+.|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e  312 (404)
T 1i24_A          235 ELRNRLDYDAVFGTALNRFCVQAAV-GHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNE  312 (404)
T ss_dssp             GGCCCCCCSTTTCCHHHHHHHHHHH-TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHH
T ss_pred             ccccccccccchhhHHHHHHHHHHc-CCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHH
Confidence                          24566776666 6777788998899999999999999999998753  4  5999998 8899999


Q ss_pred             HHHHHHHh---cCCCCCCCcCCCCCC---CcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhhh
Q 044498          269 MAEIILSF---ENEKLPIHPIPGPEG---VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKA  334 (366)
Q Consensus       269 l~~~i~~~---~g~~~~~~~~~~~~~---~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~  334 (366)
                      +++.+.+.   +|.+.++...|.+..   .....+|++|++ +|||.|+++++++++++++|++........
T Consensus       313 ~~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~~~~  383 (404)
T 1i24_A          313 LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDRVDT  383 (404)
T ss_dssp             HHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGGCCG
T ss_pred             HHHHHHHHHHhhCCCccccccCcccCccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhccCh
Confidence            99999998   787765544443321   233567999997 799999999999999999999987655443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=7e-39  Score=297.37  Aligned_cols=275  Identities=14%  Similarity=0.096  Sum_probs=219.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-c-cccceEEEccCCChhHHHhhhcC--C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-D-MFCHEFHLVDLRVMDNCLRMTSG--V   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~-~~~v~~~~~D~~~~~~l~~~~~~--~   97 (366)
                      +||+|||||||||||++|+++|+++|++         |++++|........ . ..+++++.+|++|.+.+.+++++  +
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDK---------VVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQP   90 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCE---------EEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCC
Confidence            6789999999999999999999999999         99999875432111 1 13578999999999999999887  9


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC----CCCCCCCCcccccCCCCC
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP----EFKQLDTDVKESEAWPAE  173 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg----~~~~~~~~~~e~~~~~~~  173 (366)
                      |+|||+|+.....  ...++.  +++|+.++.++++++.+.+++  +|||+||.++||    .... +  +.|+.    .
T Consensus        91 D~vih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~--~iV~~SS~~~~g~~~~~~~~-~--~~E~~----~  157 (333)
T 2q1w_A           91 DAVVHTAASYKDP--DDWYND--TLTNCVGGSNVVQAAKKNNVG--RFVYFQTALCYGVKPIQQPV-R--LDHPR----N  157 (333)
T ss_dssp             SEEEECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHTTCS--EEEEEEEGGGGCSCCCSSSB-C--TTSCC----C
T ss_pred             cEEEECceecCCC--ccCChH--HHHHHHHHHHHHHHHHHhCCC--EEEEECcHHHhCCCcccCCC-C--cCCCC----C
Confidence            9999999976421  112222  889999999999999999998  999999999998    4333 3  35543    6


Q ss_pred             CC-CchHHHHHHHHHHHHH-HHHHcCCcEEEeCCC----------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          174 PQ-DAYGLEKLATEGLCKH-YTKDFEIECRLVGEK----------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       174 p~-~~Y~~sK~~~E~~l~~-~~~~~~~~~~i~r~~----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                      |. +.|+.+|+++|.+++. ++     +++++|+.          .+..++..+.. +.  .+++ +.+.+++++++|+|
T Consensus       158 p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~~~~~~~~~~~~~~-~~--~~~~-~~~~~~~i~v~Dva  228 (333)
T 2q1w_A          158 PANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNVSGPLPIFFQRLSE-GK--KCFV-TKARRDFVFVKDLA  228 (333)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCCSSHHHHHHHHHHT-TC--CCEE-EECEECEEEHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCcCcHHHHHHHHHHc-CC--eeeC-CCceEeeEEHHHHH
Confidence            67 8999999999999887 54     66666532          34556665555 33  3445 66789999999999


Q ss_pred             HHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCC-----cccccChHHHHHHcCCCCCCCHHH
Q 044498          242 EGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGV-----RGRNSDDTLINEELGWAPTMKQKD  316 (366)
Q Consensus       242 ~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-----~~~~~~~~k~~~~lG~~p~~~~~e  316 (366)
                      +++..+++.+.+++||+++++.+|+.|+++.+.+.+|.+ .+.+.|.+...     ....+|++|++++ ||.|++++++
T Consensus       229 ~ai~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~  306 (333)
T 2q1w_A          229 RATVRAVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTIQDF-GKIEFTPLKE  306 (333)
T ss_dssp             HHHHHHHTTCCCEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHH-CCCCCCCHHH
T ss_pred             HHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHHHhc-CCCcCCCHHH
Confidence            999999987668899999999999999999999999987 55554433222     4567899999998 9999999999


Q ss_pred             HHHHHHHHHHHHH
Q 044498          317 ELRITYFWIKEQV  329 (366)
Q Consensus       317 ~l~~~~~~~~~~~  329 (366)
                      +|+++++||+++.
T Consensus       307 ~l~~~~~~~~~~~  319 (333)
T 2q1w_A          307 TVAAAVAYFREYG  319 (333)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHC
Confidence            9999999998763

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.5e-38  Score=292.90  Aligned_cols=282  Identities=17%  Similarity=0.214  Sum_probs=225.1

Q ss_pred             eEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEE
Q 044498           25 RISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNM  100 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~v  100 (366)
                      +|||||||||||++++++|+++  |++         |++++|......     ++.++.+|++|.+.+.++++  ++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~---------V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKN---------VIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGG---------EEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCE---------EEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEE
Confidence            5999999999999999999998  899         999988754321     46899999999999999887  89999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      ||+|+....  ....++...+++|+.++.++++++++.+++  ||||+||.++|+...... +..|+  .+..|.+.|+.
T Consensus        67 ih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~--~~v~~SS~~~~~~~~~~~-~~~e~--~~~~p~~~Y~~  139 (317)
T 3ajr_A           67 FHLAGILSA--KGEKDPALAYKVNMNGTYNILEAAKQHRVE--KVVIPSTIGVFGPETPKN-KVPSI--TITRPRTMFGV  139 (317)
T ss_dssp             EECCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGCCTTSCSS-SBCSS--SCCCCCSHHHH
T ss_pred             EECCcccCC--ccccChHHHhhhhhHHHHHHHHHHHHcCCC--EEEEecCHHHhCCCCCCC-Ccccc--ccCCCCchHHH
Confidence            999996531  223466778999999999999999999999  999999999998753211 12333  47788999999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHH
Q 044498          181 EKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVL  245 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~  245 (366)
                      +|+++|.+++.++.+++++++++|+.               .....+...+. +..+.+++++.+.++++|++|+|++++
T Consensus       140 sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~  218 (317)
T 3ajr_A          140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVK-REKYKCYLAPNRALPMMYMPDALKALV  218 (317)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHT-TCCEEECSCTTCCEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHh-CCCceeecCccceeeeeEHHHHHHHHH
Confidence            99999999999988889999998621               12223344444 455666777788899999999999999


Q ss_pred             HHHhcCC-----CCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC----CCcccccChHHHHHHcCCCCCCCHHH
Q 044498          246 RLIKSDF-----REPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE----GVRGRNSDDTLINEELGWAPTMKQKD  316 (366)
Q Consensus       246 ~~l~~~~-----~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~~~k~~~~lG~~p~~~~~e  316 (366)
                      .+++.+.     +++||+++ ..+|+.|+++.+.+.+|. ..+.+.|...    ......+|++|++++|||.|++++++
T Consensus       219 ~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~  296 (317)
T 3ajr_A          219 DLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDR  296 (317)
T ss_dssp             HHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHH
T ss_pred             HHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhhccccccccCHHHHHHHcCCCCCCCHHH
Confidence            9997652     48999986 689999999999999883 2333333210    11234679999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 044498          317 ELRITYFWIKEQVE  330 (366)
Q Consensus       317 ~l~~~~~~~~~~~~  330 (366)
                      +|+++++||+++..
T Consensus       297 ~l~~~~~~~~~~~~  310 (317)
T 3ajr_A          297 TIDDMIDHISEKLG  310 (317)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhhc
Confidence            99999999998753

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.7e-38  Score=297.48  Aligned_cols=284  Identities=15%  Similarity=0.211  Sum_probs=227.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      ++|+|||||||||||++|+++|+++| ++         |++++|...........++. +.+|+++.+.+..+++     
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~---------V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~  114 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITD---------ILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFG  114 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCC---------EEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcE---------EEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccC
Confidence            34789999999999999999999999 89         99999876542111111234 7789999998888886     


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ  175 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~  175 (366)
                      ++|+|||+|+....   ...++...+++|+.++.++++++.+.++   +|||+||.++||.....+.  .|+.  +..|.
T Consensus       115 ~~d~Vih~A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~---r~V~~SS~~v~g~~~~~~~--~E~~--~~~p~  184 (357)
T 2x6t_A          115 DVEAIFHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRTSDFI--ESRE--YEKPL  184 (357)
T ss_dssp             SCCEEEECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC---CEEEEEEGGGGCSCSSCCC--SSGG--GCCCS
T ss_pred             CCCEEEECCcccCC---ccCCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcchHHhCCCCCCCc--CCcC--CCCCC
Confidence            59999999997542   3456677899999999999999999876   6999999999997665443  5554  77889


Q ss_pred             CchHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEecCCcc-eeeeeeHHH
Q 044498          176 DAYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEMWGDGKQ-TRSLTFIDE  239 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~~~~~~-~~~~i~v~D  239 (366)
                      +.|+.+|+++|.++..++.+++++++++|+.               .+..++..+.. +..+.+++++.+ .++|+|++|
T Consensus       185 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  263 (357)
T 2x6t_A          185 NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-GESPKLFEGSENFKRDFVYVGD  263 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHT-TCCCEEETTGGGCEECEEEHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHc-CCCcEEeCCCCcceEccEEHHH
Confidence            9999999999999999988889999998632               23445555555 667777788888 899999999


Q ss_pred             HHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCC-----CcccccChHHHHHHcCC-CCCCC
Q 044498          240 CVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-----VRGRNSDDTLINEELGW-APTMK  313 (366)
Q Consensus       240 ~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~~~~k~~~~lG~-~p~~~  313 (366)
                      +|++++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+ .+...+.+..     ......|.+|+++ ||| .|.++
T Consensus       264 va~ai~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~  341 (357)
T 2x6t_A          264 VADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA-AGYDKPFKT  341 (357)
T ss_dssp             HHHHHHHHHHHCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTTSCCSBCCCCCHHHHH-TTCCCCCCC
T ss_pred             HHHHHHHHHhcCCCCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcccccccccccccCHHHHHH-cCCCCCCCC
Confidence            99999999987668899999999999999999999999987 4434443321     2235678999976 999 79999


Q ss_pred             HHHHHHHHHHHHHHH
Q 044498          314 QKDELRITYFWIKEQ  328 (366)
Q Consensus       314 ~~e~l~~~~~~~~~~  328 (366)
                      ++++|+++++||+++
T Consensus       342 l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          342 VAEGVTEYMAWLNRD  356 (357)
T ss_dssp             HHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999999764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-39  Score=291.46  Aligned_cols=264  Identities=16%  Similarity=0.196  Sum_probs=219.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      |+|||||||||||++++++|+++|++         |++++|.               .+|++|.+.+.++++  ++|+||
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~---------------~~D~~d~~~~~~~~~~~~~d~vi   61 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYD---------IYPFDKK---------------LLDITNISQVQQVVQEIRPHIII   61 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEE---------EEEECTT---------------TSCTTCHHHHHHHHHHHCCSEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCE---------EEEeccc---------------ccCCCCHHHHHHHHHhcCCCEEE
Confidence            48999999999999999999999999         9999982               389999999999887  799999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+|+.... ..+..++...+++|+.++.++++++++.++   ||||+||.++||.....+.  .|+.  +..|.+.|+.+
T Consensus        62 ~~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~v~~SS~~vy~~~~~~~~--~E~~--~~~p~~~Y~~s  133 (287)
T 3sc6_A           62 HCAAYTKV-DQAEKERDLAYVINAIGARNVAVASQLVGA---KLVYISTDYVFQGDRPEGY--DEFH--NPAPINIYGAS  133 (287)
T ss_dssp             ECCCCCCH-HHHTTCHHHHHHHHTHHHHHHHHHHHHHTC---EEEEEEEGGGSCCCCSSCB--CTTS--CCCCCSHHHHH
T ss_pred             ECCcccCh-HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEchhhhcCCCCCCCC--CCCC--CCCCCCHHHHH
Confidence            99997642 233457788899999999999999999987   7999999999998765543  6655  77899999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCC---------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCC
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEK---------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF  252 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  252 (366)
                      |+++|++++.+.    .+++++|+.         .+..++..+.. +.++.++++  +.++++|++|+|+++..+++++.
T Consensus       134 K~~~E~~~~~~~----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~  206 (287)
T 3sc6_A          134 KYAGEQFVKELH----NKYFIVRTSWLYGKYGNNFVKTMIRLGKE-REEISVVAD--QIGSPTYVADLNVMINKLIHTSL  206 (287)
T ss_dssp             HHHHHHHHHHHC----SSEEEEEECSEECSSSCCHHHHHHHHHTT-CSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHhC----CCcEEEeeeeecCCCCCcHHHHHHHHHHc-CCCeEeecC--cccCceEHHHHHHHHHHHHhCCC
Confidence            999999998874    467777532         23455554444 667777654  78999999999999999999877


Q ss_pred             CCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCC-----C-CCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 044498          253 REPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-----P-EGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK  326 (366)
Q Consensus       253 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-----~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~  326 (366)
                      +++||+++++.+|+.|+++.+.+.+|.+..+...+.     + .......+|++|++ +|||.|+++++++|+++++|++
T Consensus       207 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~  285 (287)
T 3sc6_A          207 YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETK  285 (287)
T ss_dssp             CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC
T ss_pred             CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHh
Confidence            899999999999999999999999998866544331     1 22345678999998 8999999999999999999987


Q ss_pred             H
Q 044498          327 E  327 (366)
Q Consensus       327 ~  327 (366)
                      +
T Consensus       286 ~  286 (287)
T 3sc6_A          286 S  286 (287)
T ss_dssp             -
T ss_pred             c
Confidence            5

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-39  Score=295.01  Aligned_cols=281  Identities=16%  Similarity=0.233  Sum_probs=207.8

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC-----CC
Q 044498           25 RISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG-----VD   98 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~-----~d   98 (366)
                      +|||||||||||++|+++|+++| ++         |++++|...........++. +.+|+++.+.+.+++++     +|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~---------V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITD---------ILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCC---------EEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcE---------EEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccccCCCc
Confidence            59999999999999999999999 89         99999876543111112234 77899999999888875     99


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCch
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAY  178 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y  178 (366)
                      +|||+|+....   ...++...+++|+.++.++++++++.++   ||||+||.++||.....+  +.|+.  +..|.+.|
T Consensus        71 ~vi~~a~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~v~g~~~~~~--~~E~~--~~~p~~~Y  140 (310)
T 1eq2_A           71 AIFHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRTSDF--IESRE--YEKPLNVY  140 (310)
T ss_dssp             EEEECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC---CEEEEEEGGGGTTCCSCB--CSSGG--GCCCSSHH
T ss_pred             EEEECcccccC---cccCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEeeHHHhCCCCCCC--CCCCC--CCCCCChh
Confidence            99999997642   3456777899999999999999999876   699999999999765543  25554  77889999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEecCCcc-eeeeeeHHHHHH
Q 044498          179 GLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEMWGDGKQ-TRSLTFIDECVE  242 (366)
Q Consensus       179 ~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~~~~~~-~~~~i~v~D~a~  242 (366)
                      +.+|+++|.++..++.+++++++++|+.               .+..++..+.. +.++.+++++.+ .++++|++|+|+
T Consensus       141 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-GESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC--------------CBCEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHc-CCCcEEecCCCcceEccEEHHHHHH
Confidence            9999999999999988889999998632               23445555554 666677788888 899999999999


Q ss_pred             HHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCC-----CcccccChHHHHHHcCC-CCCCCHHH
Q 044498          243 GVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-----VRGRNSDDTLINEELGW-APTMKQKD  316 (366)
Q Consensus       243 ~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~~~~k~~~~lG~-~p~~~~~e  316 (366)
                      +++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+ .+...+.+..     ......|.+|+++ ||| .|.+++++
T Consensus       220 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~  297 (310)
T 1eq2_A          220 VNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA-AGYDKPFKTVAE  297 (310)
T ss_dssp             HHHHHHHHCCCEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHH-TTCCCCCCCHHH
T ss_pred             HHHHHHhcCCCCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhcccccccccchHHHHh-cCCCCCCCCHHH
Confidence            99999987668899999999999999999999999987 3333333321     2335678899966 999 79999999


Q ss_pred             HHHHHHHHHHHH
Q 044498          317 ELRITYFWIKEQ  328 (366)
Q Consensus       317 ~l~~~~~~~~~~  328 (366)
                      +|+++++||+++
T Consensus       298 ~l~~~~~~~~~~  309 (310)
T 1eq2_A          298 GVTEYMAWLNRD  309 (310)
T ss_dssp             HHHHHHHHTC--
T ss_pred             HHHHHHHHHHhc
Confidence            999999999764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.8e-38  Score=294.23  Aligned_cols=283  Identities=16%  Similarity=0.163  Sum_probs=222.7

Q ss_pred             CCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCChhHHHhhh
Q 044498           17 SHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        17 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .....++|+|||||||||||++|+++|+++|++         |++++|.......  ....+++++.+|++|.+++.+++
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~   84 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHE---------ILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAF   84 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCE---------EEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHH
Confidence            334446789999999999999999999999999         9999986543220  11135789999999999999999


Q ss_pred             c--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498           95 S--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus        95 ~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                      +  ++|+|||+||.....  ...++.  +++|+.++.++++++.+.+++  +|||+||.++|+.....+.++.|+.    
T Consensus        85 ~~~~~D~vih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~--~iV~~SS~~~~~~~~~~~~~~~E~~----  154 (330)
T 2pzm_A           85 DSFKPTHVVHSAAAYKDP--DDWAED--AATNVQGSINVAKAASKAGVK--RLLNFQTALCYGRPATVPIPIDSPT----  154 (330)
T ss_dssp             HHHCCSEEEECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHHTCS--EEEEEEEGGGGCSCSSSSBCTTCCC----
T ss_pred             hhcCCCEEEECCccCCCc--cccChh--HHHHHHHHHHHHHHHHHcCCC--EEEEecCHHHhCCCccCCCCcCCCC----
Confidence            8  999999999976421  122222  889999999999999999998  9999999999987644311125543    


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC----------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE----------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                      .|.+.|+.+|+++|.+++.+    +++++++|+          ..+..++..+.. +.  .+++++. .++++|++|+|+
T Consensus       155 ~~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~-~~--~~~~~~~-~~~~i~~~Dva~  226 (330)
T 2pzm_A          155 APFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLAIGPIPTFYKRLKA-GQ--KCFCSDT-VRDFLDMSDFLA  226 (330)
T ss_dssp             CCCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCCSSHHHHHHHHHHT-TC--CCCEESC-EECEEEHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCCCCHHHHHHHHHHc-CC--EEeCCCC-EecceeHHHHHH
Confidence            67889999999999988776    778877762          223444555544 33  4445666 889999999999


Q ss_pred             -HHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHH-----HHHcCCCCCCCHHH
Q 044498          243 -GVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLI-----NEELGWAPTMKQKD  316 (366)
Q Consensus       243 -~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~-----~~~lG~~p~~~~~e  316 (366)
                       +++.+++.+.+++||+++++.+|+.|+++.+.+.+|.+ ++...|.+.......+|++|+     ++ |||.|++++++
T Consensus       227 ~a~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~  304 (330)
T 2pzm_A          227 IADLSLQEGRPTGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVAPGADDVPSVVLDPSKTETE-FGWKAKVDFKD  304 (330)
T ss_dssp             HHHHHTSTTCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEECCCTTSCSEECBCCHHHHHH-HCCCCCCCHHH
T ss_pred             HHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCcchhhccCCHHHHhhchHHH-cCCcccCCHHH
Confidence             99999976557899999999999999999999999987 555555433344567788888     77 99999999999


Q ss_pred             HHHHHHHHHHHH
Q 044498          317 ELRITYFWIKEQ  328 (366)
Q Consensus       317 ~l~~~~~~~~~~  328 (366)
                      +|+++++||+++
T Consensus       305 ~l~~~~~~~~~~  316 (330)
T 2pzm_A          305 TITGQLAWYDKY  316 (330)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999999875

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8.1e-38  Score=291.08  Aligned_cols=286  Identities=15%  Similarity=0.089  Sum_probs=224.5

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcC-------CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSER-------HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g-------~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .++|+|||||||||||++|+++|+++|       ++         |++++|...........++.++.+|+++.+.+.++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~---------V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEK---------FTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEE---------EEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCce---------EEEEEccCCccccccCCceeEEEcCCCCHHHHHHH
Confidence            366799999999999999999999999       78         99999876433222233568899999999999998


Q ss_pred             hc-CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-----CCceeEEEEecccccCCCCCCCCCcccc
Q 044498           94 TS-GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-----VMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        94 ~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-----~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      ++ ++|+|||+|+....  ....++...+++|+.++.++++++++.+     ++  +|||+||.++|+.....+  +.|+
T Consensus        83 ~~~~~d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~--~iv~~SS~~~~~~~~~~~--~~E~  156 (342)
T 2hrz_A           83 VEARPDVIFHLAAIVSG--EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKP--RVVFTSSIAVFGAPLPYP--IPDE  156 (342)
T ss_dssp             HHTCCSEEEECCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCC--EEEEEEEGGGCCSSCCSS--BCTT
T ss_pred             HhcCCCEEEECCccCcc--cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCc--EEEEeCchHhhCCCCCCC--cCCC
Confidence            84 89999999996531  2234667789999999999999999876     78  999999999998754333  3555


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeC-------CCc--------HHHHHHHHHhCCCCeEEecCCccee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG-------EKA--------PAAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r-------~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      .  +..|.+.|+.+|+++|.++..++.+++++.+++|       +..        +..++..+.. +.+..++..+....
T Consensus       157 ~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  233 (342)
T 2hrz_A          157 F--HTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLV-GQEAVLPVPESIRH  233 (342)
T ss_dssp             C--CCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHT-TCCEEECSCTTCEE
T ss_pred             C--CCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhc-CCCeeccCCCccce
Confidence            4  7788999999999999999999888777766664       221        2344555554 66666666666777


Q ss_pred             eeeeHHHHHHHHHHHHhcC-----CCCcEEecCCCcccHHHHHHHHHHhcCCCC--CCCcCCCCC-----CCcccccChH
Q 044498          233 SLTFIDECVEGVLRLIKSD-----FREPLNIGSDEMVSINEMAEIILSFENEKL--PIHPIPGPE-----GVRGRNSDDT  300 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~-----~~~~~~~~~~  300 (366)
                      +++|++|+|++++.+++.+     .+++||++ ++.+|+.|+++.+.+.+|.+.  .+...|.+.     ......+|++
T Consensus       234 ~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  312 (342)
T 2hrz_A          234 WHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAK  312 (342)
T ss_dssp             EEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCH
T ss_pred             eeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChH
Confidence            8999999999999999765     46899995 578999999999999998754  223333211     1111357999


Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHH
Q 044498          301 LINEELGWAPTMKQKDELRITYFWIK  326 (366)
Q Consensus       301 k~~~~lG~~p~~~~~e~l~~~~~~~~  326 (366)
                      |+++ |||.|+++++++|+++++||+
T Consensus       313 k~~~-lG~~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          313 RARE-LGFTAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             HHHH-TTCCCCSSHHHHHHHHHHHHS
T ss_pred             HHHH-cCCCCCCCHHHHHHHHHHHhc
Confidence            9988 999999999999999999997

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=2.5e-37  Score=313.94  Aligned_cols=298  Identities=17%  Similarity=0.189  Sum_probs=230.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++|+|||||||||||++|+++|+++|++         |++++|.......       ....++.++.+|+++.+.+.+++
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~   80 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYD---------CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVF   80 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCE---------EEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHH
Confidence            5689999999999999999999999999         9999987543210       01245789999999999999988


Q ss_pred             c--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC--CCCcccccCC
Q 044498           95 S--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL--DTDVKESEAW  170 (366)
Q Consensus        95 ~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~--~~~~~e~~~~  170 (366)
                      +  ++|+|||+|+.... .....++...+++|+.++.++++++++.+++  ||||+||.++||.....  ..++.|+  .
T Consensus        81 ~~~~~D~Vih~A~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~--~iV~~SS~~vyg~~~~~~~~~~~~E~--~  155 (699)
T 1z45_A           81 KEYKIDSVIHFAGLKAV-GESTQIPLRYYHNNILGTVVLLELMQQYNVS--KFVFSSSATVYGDATRFPNMIPIPEE--C  155 (699)
T ss_dssp             HHSCCCEEEECCSCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEGGGGCCGGGSTTCCSBCTT--S
T ss_pred             HhCCCCEEEECCcccCc-CccccCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEECcHHHhCCCccccccCCcccc--C
Confidence            7  89999999996531 1123355677899999999999999999998  99999999999865321  1112444  3


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH--cCCcEEEeCCC--------------------cHHHHHHHHHh-CCCCeEEec-
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKD--FEIECRLVGEK--------------------APAAFSRKAVT-STDNFEMWG-  226 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~--~~~~~~i~r~~--------------------~~~~~~~~~~~-~~~~~~i~~-  226 (366)
                      +..|.+.|+.+|+++|.+++.++.+  .+++++++|+.                    .+..++..+.. ++.++.+++ 
T Consensus       156 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  235 (699)
T 1z45_A          156 PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGD  235 (699)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC--
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCC
Confidence            6778899999999999999998877  68999998721                    12233444443 234556665 


Q ss_pred             -----CCcceeeeeeHHHHHHHHHHHHhcC--------CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CC
Q 044498          227 -----DGKQTRSLTFIDECVEGVLRLIKSD--------FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GV  292 (366)
Q Consensus       227 -----~~~~~~~~i~v~D~a~~~~~~l~~~--------~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~  292 (366)
                           ++.+.++|+|++|+|++++.+++..        .+++||+++++.+|+.|+++.+.+.+|.+.++...+.+. ..
T Consensus       236 ~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~  315 (699)
T 1z45_A          236 DYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDV  315 (699)
T ss_dssp             ----CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------C
T ss_pred             cccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCCcc
Confidence                 5778899999999999999988641        246899999999999999999999999887665554332 34


Q ss_pred             cccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 044498          293 RGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEK  333 (366)
Q Consensus       293 ~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~  333 (366)
                      .....|++|++++|||.|+++++++|+++++||+++.....
T Consensus       316 ~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~~~  356 (699)
T 1z45_A          316 LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQ  356 (699)
T ss_dssp             CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred             ccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcchh
Confidence            45678999999999999999999999999999998754433

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1e-37  Score=284.04  Aligned_cols=265  Identities=16%  Similarity=0.163  Sum_probs=215.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      ..++|||||||||||++++++|+++|++         |++++|.               .+|++|.+.+.++++  ++|+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~   66 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVE---------VIPTDVQ---------------DLDITNVLAVNKFFNEKKPNV   66 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEE---------EEEECTT---------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCe---------EEeccCc---------------cCCCCCHHHHHHHHHhcCCCE
Confidence            3478999999999999999999999999         9999885               379999999999888  8999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |||+|+.... .....++...+++|+.++.++++++++.++   ||||+||.++|+.....+.  .|+.  +..|.+.|+
T Consensus        67 vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~iv~~SS~~v~~~~~~~~~--~E~~--~~~~~~~Y~  138 (292)
T 1vl0_A           67 VINCAAHTAV-DKCEEQYDLAYKINAIGPKNLAAAAYSVGA---EIVQISTDYVFDGEAKEPI--TEFD--EVNPQSAYG  138 (292)
T ss_dssp             EEECCCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC---EEEEEEEGGGSCSCCSSCB--CTTS--CCCCCSHHH
T ss_pred             EEECCccCCH-HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEechHHeECCCCCCCC--CCCC--CCCCccHHH
Confidence            9999996531 122356677899999999999999999875   7999999999997654442  5554  778899999


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCCc--------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEKA--------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      .+|+++|.+++.+    ..+++++|+..        +..++..+.. +..+.+.+  ++.++++|++|+|++++.+++.+
T Consensus       139 ~sK~~~E~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          139 KTKLEGENFVKAL----NPKYYIVRTAWLYGDGNNFVKTMINLGKT-HDELKVVH--DQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             HHHHHHHHHHHHH----CSSEEEEEECSEESSSSCHHHHHHHHHHH-CSEEEEES--SCEECCEEHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhh----CCCeEEEeeeeeeCCCcChHHHHHHHHhc-CCcEEeec--CeeeCCccHHHHHHHHHHHHhcC
Confidence            9999999998876    34677776432        2344444444 56666655  47789999999999999999877


Q ss_pred             CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCC-----C-CCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 044498          252 FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-----P-EGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWI  325 (366)
Q Consensus       252 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-----~-~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~  325 (366)
                      .+++||+++++.+|+.|+++.+.+.+|.+..+...|.     + .......+|++|++++|||.|+ +++++|+++++||
T Consensus       212 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~  290 (292)
T 1vl0_A          212 NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLL  290 (292)
T ss_dssp             CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHH
T ss_pred             CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHh
Confidence            7889999999999999999999999998755433332     1 1233467899999999999999 9999999999998


Q ss_pred             H
Q 044498          326 K  326 (366)
Q Consensus       326 ~  326 (366)
                      +
T Consensus       291 ~  291 (292)
T 1vl0_A          291 Q  291 (292)
T ss_dssp             T
T ss_pred             c
Confidence            6

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=2.8e-37  Score=311.32  Aligned_cols=292  Identities=19%  Similarity=0.223  Sum_probs=234.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhH-HHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDN-CLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~-l~~~~~~~d   98 (366)
                      ++|+|||||||||||++++++|+++ |++         |++++|+....... ...+++++.+|+++.++ +.++++++|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~---------V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D  384 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYE---------VYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCD  384 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEE---------EEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCE---------EEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCC
Confidence            5689999999999999999999998 899         99999976543221 23457899999999765 777888999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC----C-CC
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW----P-AE  173 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~----~-~~  173 (366)
                      +|||+|+..... ....++...+++|+.++.++++++.+.+ +  ||||+||.++||.....+  +.|+...    + ..
T Consensus       385 ~Vih~Aa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~--r~V~~SS~~vyg~~~~~~--~~E~~~~~~~~p~~~  458 (660)
T 1z7e_A          385 VVLPLVAIATPI-EYTRNPLRVFELDFEENLRIIRYCVKYR-K--RIIFPSTSEVYGMCSDKY--FDEDHSNLIVGPVNK  458 (660)
T ss_dssp             EEEECCCCCCTH-HHHHSHHHHHHHHTHHHHHHHHHHHHTT-C--EEEEECCGGGGBTCCSSS--BCTTTCCEEECCTTC
T ss_pred             EEEECceecCcc-ccccCHHHHHHhhhHHHHHHHHHHHHhC-C--EEEEEecHHHcCCCCCcc--cCCCccccccCcccC
Confidence            999999976421 2334667789999999999999999998 7  999999999999765544  2555421    1 25


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc-------------------HHHHHHHHHhCCCCeEEecCCcceeee
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA-------------------PAAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~-------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                      |.+.|+.+|+++|.++..++.+++++++++|+..                   +..++..+.. +.++.+++++.+.++|
T Consensus       459 p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~g~~~~~~  537 (660)
T 1z7e_A          459 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCF  537 (660)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHH-TCCEEEEGGGCCEEEC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHc-CCCcEEeCCCCeEEEE
Confidence            6778999999999999999888899999996432                   3455666666 6777788888899999


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC-cccHHHHHHHHHHhcCCCCCCCcCCCC----------------CCCc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE-MVSINEMAEIILSFENEKLPIHPIPGP----------------EGVR  293 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~----------------~~~~  293 (366)
                      +|++|+|++++.+++.+    .+++||+++++ .+|+.|+++.+.+.+|.+......|..                ....
T Consensus       538 i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  617 (660)
T 1z7e_A          538 TDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVE  617 (660)
T ss_dssp             EEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCS
T ss_pred             EEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchh
Confidence            99999999999999764    46899999986 899999999999998865332222211                1223


Q ss_pred             ccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       294 ~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ....|++|++++|||.|+++++++|+++++||+++.
T Consensus       618 ~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~  653 (660)
T 1z7e_A          618 HRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  653 (660)
T ss_dssp             CCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTS
T ss_pred             hcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhc
Confidence            457799999999999999999999999999998865

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=6.9e-38  Score=286.07  Aligned_cols=268  Identities=14%  Similarity=0.126  Sum_probs=216.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC--CCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG--VDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~--~d~vi  101 (366)
                      |+|||||||||||++++++|+ +|++         |++++|..           .++.+|++|.+.+.+++++  +|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~---------V~~~~r~~-----------~~~~~D~~d~~~~~~~~~~~~~d~vi   59 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGN---------LIALDVHS-----------KEFCGDFSNPKGVAETVRKLRPDVIV   59 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSE---------EEEECTTC-----------SSSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCe---------EEEecccc-----------ccccccCCCHHHHHHHHHhcCCCEEE
Confidence            589999999999999999999 8999         99999875           2457899999999998875  99999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+|+.... .....++...+++|+.++.++++++++.++   ||||+||.++||.....+.  .|+.  +..|.+.|+.+
T Consensus        60 h~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~vy~~~~~~~~--~E~~--~~~p~~~Y~~s  131 (299)
T 1n2s_A           60 NAAAHTAV-DKAESEPELAQLLNATSVEAIAKAANETGA---WVVHYSTDYVFPGTGDIPW--QETD--ATSPLNVYGKT  131 (299)
T ss_dssp             ECCCCCCH-HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC---EEEEEEEGGGSCCCTTCCB--CTTS--CCCCSSHHHHH
T ss_pred             ECcccCCH-hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC---cEEEEecccEEeCCCCCCC--CCCC--CCCCccHHHHH
Confidence            99996531 123456778899999999999999998875   7999999999998765443  5554  77889999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCC---------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEK---------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                      |+++|++++.++    .+++++|+.         .+..++..+.. +.++.++++  +.++++|++|+|+++..+++++ 
T Consensus       132 K~~~E~~~~~~~----~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~  204 (299)
T 1n2s_A          132 KLAGEKALQDNC----PKHLIFRTSWVYAGKGNNFAKTMLRLAKE-RQTLSVIND--QYGAPTGAELLADCTAHAIRVAL  204 (299)
T ss_dssp             HHHHHHHHHHHC----SSEEEEEECSEECSSSCCHHHHHHHHHHH-CSEEEEECS--CEECCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC----CCeEEEeeeeecCCCcCcHHHHHHHHHhc-CCCEEeecC--cccCCeeHHHHHHHHHHHHHHhc
Confidence            999999998773    378887633         23445555554 566666654  7899999999999999999764 


Q ss_pred             ----CCCcEEecCCCcccHHHHHHHHHHhcCCCC------CCCcCCC-----C-CCCcccccChHHHHHHcCCCCCCCHH
Q 044498          252 ----FREPLNIGSDEMVSINEMAEIILSFENEKL------PIHPIPG-----P-EGVRGRNSDDTLINEELGWAPTMKQK  315 (366)
Q Consensus       252 ----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~------~~~~~~~-----~-~~~~~~~~~~~k~~~~lG~~p~~~~~  315 (366)
                          .+++||+++++.+|+.|+++.+.+.+|.+.      .+...+.     + .......+|++|++++|||.|+ +++
T Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~  283 (299)
T 1n2s_A          205 NKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWE  283 (299)
T ss_dssp             HCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHH
T ss_pred             cccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHH
Confidence                378999999999999999999999988652      2222221     1 1133467899999999999998 899


Q ss_pred             HHHHHHHHHHHHH
Q 044498          316 DELRITYFWIKEQ  328 (366)
Q Consensus       316 e~l~~~~~~~~~~  328 (366)
                      ++|+++++||+++
T Consensus       284 ~~l~~~~~~~~~~  296 (299)
T 1n2s_A          284 LGVKRMLTEMFTT  296 (299)
T ss_dssp             HHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=2.9e-37  Score=280.26  Aligned_cols=263  Identities=14%  Similarity=0.058  Sum_probs=207.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      +||+|||||| ||||++|+++|+++|++         |++++|+..........+++++.+|+++.+     +.++|+||
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi   68 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWR---------IIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLL   68 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCE---------EEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEE
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCE---------EEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEE
Confidence            3689999998 99999999999999999         999999876544333456799999999954     78999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHH--cCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM--NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |+|+....      .        ...+.++++++++  .+++  ||||+||.++||.....+.  .|+.  +..|.+.|+
T Consensus        69 ~~a~~~~~------~--------~~~~~~l~~a~~~~~~~~~--~~v~~Ss~~vyg~~~~~~~--~E~~--~~~p~~~Y~  128 (286)
T 3ius_A           69 ISTAPDSG------G--------DPVLAALGDQIAARAAQFR--WVGYLSTTAVYGDHDGAWV--DETT--PLTPTAARG  128 (286)
T ss_dssp             ECCCCBTT------B--------CHHHHHHHHHHHHTGGGCS--EEEEEEEGGGGCCCTTCEE--CTTS--CCCCCSHHH
T ss_pred             ECCCcccc------c--------cHHHHHHHHHHHhhcCCce--EEEEeecceecCCCCCCCc--CCCC--CCCCCCHHH
Confidence            99996531      1        1235789999998  6788  9999999999998765442  5554  788999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCCcHH----HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-CCC
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEKAPA----AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-FRE  254 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~  254 (366)
                      .+|+++|+++..+   .+++++++|+..+.    ..+..+.. +....+.+. .+.++|+|++|+|+++..+++++ .++
T Consensus       129 ~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~g~  203 (286)
T 3ius_A          129 RWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPFSKLGK-GGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDPGA  203 (286)
T ss_dssp             HHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSSTTSSS-SCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCTTC
T ss_pred             HHHHHHHHHHHhh---cCCCEEEEeccceECCCchHHHHHhc-CCccccCCC-CcccceEEHHHHHHHHHHHHhCCCCCC
Confidence            9999999999887   58999999754321    11222333 555666554 57899999999999999999886 567


Q ss_pred             cEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC--CC-------CcccccChHHHHHHcCCCCCC-CHHHHHHHHHHH
Q 044498          255 PLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP--EG-------VRGRNSDDTLINEELGWAPTM-KQKDELRITYFW  324 (366)
Q Consensus       255 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~-------~~~~~~~~~k~~~~lG~~p~~-~~~e~l~~~~~~  324 (366)
                      +||+++++.+|+.|+++.+.+.+|.+.+......+  ..       .....+|++|++++|||.|++ +++++|+++++.
T Consensus       204 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~  283 (286)
T 3ius_A          204 VYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD  283 (286)
T ss_dssp             EEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred             EEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence            99999999999999999999999987654221111  11       144568999999999999999 799999998763

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.2e-36  Score=280.06  Aligned_cols=274  Identities=15%  Similarity=0.175  Sum_probs=190.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~v  100 (366)
                      +|+|||||||||||++++++|+++|++         |++++|+...      .+  ++.+|+++.+.+.++++  ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~v   64 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWH---------AVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVI   64 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCE---------EEEEC--------------------------CHHHHHHHCCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCe---------EEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence            579999999999999999999999999         9999986543      12  78899999998888887  49999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      ||+|+.... ..+..++...+++|+.++.++++++.+.++   ||||+||.++|+. ...+  +.|+.  +..|.+.|+.
T Consensus        65 ih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~v~~~-~~~~--~~E~~--~~~~~~~Y~~  135 (315)
T 2ydy_A           65 VHCAAERRP-DVVENQPDAASQLNVDASGNLAKEAAAVGA---FLIYISSDYVFDG-TNPP--YREED--IPAPLNLYGK  135 (315)
T ss_dssp             EECC--------------------CHHHHHHHHHHHHHTC---EEEEEEEGGGSCS-SSCS--BCTTS--CCCCCSHHHH
T ss_pred             EECCcccCh-hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEchHHHcCC-CCCC--CCCCC--CCCCcCHHHH
Confidence            999997542 123456677899999999999999999875   7999999999987 3333  35554  6778999999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEeCCC------------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHH
Q 044498          181 EKLATEGLCKHYTKDFEIECRLVGEK------------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI  248 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~~~~i~r~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l  248 (366)
                      +|+++|.+++.+    +++++++|+.            .+..++..+...+..+.+.  +.+.++++|++|+|++++.++
T Consensus       136 sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~  209 (315)
T 2ydy_A          136 TKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLA  209 (315)
T ss_dssp             HHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHH
Confidence            999999998876    5666777532            2233444444135555554  357789999999999999998


Q ss_pred             hc-----CCCCcEEecCCCcccHHHHHHHHHHhcCCCCC-CCcCCC-C----CCCcccccChHHHHHHcCCCCCCCHHHH
Q 044498          249 KS-----DFREPLNIGSDEMVSINEMAEIILSFENEKLP-IHPIPG-P----EGVRGRNSDDTLINEELGWAPTMKQKDE  317 (366)
Q Consensus       249 ~~-----~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~-~----~~~~~~~~~~~k~~~~lG~~p~~~~~e~  317 (366)
                      ..     ..+++||+++++.+|+.|+++.+.+.+|.+.. +...+. +    .......+|++|++++ ||.|.++++++
T Consensus       210 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~  288 (315)
T 2ydy_A          210 EKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETL-GIGQRTPFRIG  288 (315)
T ss_dssp             HHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHT-TCCCCCCHHHH
T ss_pred             HhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhc-CCCCCCCHHHH
Confidence            64     35789999999999999999999999998754 222221 1    1223467899999988 99999999999


Q ss_pred             HHHHHHHHHHHH
Q 044498          318 LRITYFWIKEQV  329 (366)
Q Consensus       318 l~~~~~~~~~~~  329 (366)
                      |+++++||+++.
T Consensus       289 l~~~~~~~~~~~  300 (315)
T 2ydy_A          289 IKESLWPFLIDK  300 (315)
T ss_dssp             HHHHHGGGCC--
T ss_pred             HHHHHHHHccch
Confidence            999999998864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=4.8e-36  Score=278.63  Aligned_cols=287  Identities=14%  Similarity=0.085  Sum_probs=206.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccc--cccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MED--MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~--~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++|||||||||||++|+++|+++|++         |+++.|+.....      ...  ..+++++.+|++|.+++.++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   74 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYT---------VRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEA   74 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCE---------EEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHH
Confidence            5689999999999999999999999999         999888754210      001  12468899999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCc-chhhhhhHHHHHHHHHHHHHcC-CCceeEEEEeccc-ccCCCCCCCCCcccccCC
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNH-SVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSAC-IYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~-vyg~~~~~~~~~~e~~~~  170 (366)
                      ++++|+|||+|+...   ....++ ...+++|+.++.++++++.+.+ ++  ||||+||.+ +|+.....+ .+.|+...
T Consensus        75 ~~~~d~Vih~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~--riV~~SS~~~~~~~~~~~~-~~~E~~~~  148 (337)
T 2c29_D           75 IKGCTGVFHVATPMD---FESKDPENEVIKPTIEGMLGIMKSCAAAKTVR--RLVFTSSAGTVNIQEHQLP-VYDESCWS  148 (337)
T ss_dssp             HTTCSEEEECCCCCC---SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCC--EEEEECCGGGTSCSSSCCS-EECTTCCC
T ss_pred             HcCCCEEEEeccccC---CCCCChHHHHHHHHHHHHHHHHHHHHhCCCcc--EEEEeeeHhhcccCCCCCc-ccCcccCC
Confidence            999999999998642   222233 3478999999999999999987 88  999999987 555432211 12444321


Q ss_pred             CC-------CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH---------HHHHHHH---HhCCCCeEEecCCcce
Q 044498          171 PA-------EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP---------AAFSRKA---VTSTDNFEMWGDGKQT  231 (366)
Q Consensus       171 ~~-------~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~---------~~~~~~~---~~~~~~~~i~~~~~~~  231 (366)
                      +.       .|.+.|+.+|+++|.++..++..++++++++|+..+         ...+...   +. +... .++.. ..
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~-g~~~-~~~~~-~~  225 (337)
T 2c29_D          149 DMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPIT-GNEA-HYSII-RQ  225 (337)
T ss_dssp             CHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHH-TCGG-GHHHH-TE
T ss_pred             chhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHc-CCCc-ccccc-CC
Confidence            11       245679999999999999988878999999864321         1122221   22 2221 12221 22


Q ss_pred             eeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCC-CCCCCcCCCCCCCcccccChHHHHHHcCCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENE-KLPIHPIPGPEGVRGRNSDDTLINEELGWA  309 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~  309 (366)
                      ..|+|++|+|++++.+++.+ ..+.|+++ +..+|+.|+++.+.+.++. ..+..+.+.+........|++|+ ++|||.
T Consensus       226 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lG~~  303 (337)
T 2c29_D          226 GQFVHLDDLCNAHIYLFENPKAEGRYICS-SHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKL-TDLGFE  303 (337)
T ss_dssp             EEEEEHHHHHHHHHHHHHCTTCCEEEEEC-CEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHH-HHHTCC
T ss_pred             CCEEEHHHHHHHHHHHhcCcccCceEEEe-CCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHH-HHcCCC
Confidence            45999999999999999875 34577665 4569999999999998742 33222222222334456899999 789999


Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q 044498          310 PTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       310 p~~~~~e~l~~~~~~~~~~  328 (366)
                      |+++++++|+++++|++++
T Consensus       304 p~~~l~e~l~~~~~~~~~~  322 (337)
T 2c29_D          304 FKYSLEDMFTGAVDTCRAK  322 (337)
T ss_dssp             CCCCHHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHc
Confidence            9999999999999999875

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.2e-35  Score=278.69  Aligned_cols=281  Identities=11%  Similarity=0.018  Sum_probs=219.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-----CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-----HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG-   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-----~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~-   96 (366)
                      +|+|||||||||||++|+++|+++|     ++         |++++|...... ....+++++.+|++|.+.+.+++++ 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~---------V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWK---------VYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPL   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEE---------EEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceE---------EEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcC
Confidence            3689999999999999999999999     89         999999865433 2234578999999999999999887 


Q ss_pred             --CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEE-------EEecccccCCCCCCCCCcc
Q 044498           97 --VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFF-------FVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        97 --~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I-------~~SS~~vyg~~~~~~~~~~  165 (366)
                        +|+|||+|+...      .++...+++|+.++.+++++|++.  +++  +||       |+||.++||.......++.
T Consensus        71 ~~~d~vih~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~--~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~  142 (364)
T 2v6g_A           71 TDVTHVFYVTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLK--HISLQTGRKHYMGPFESYGKIESHDPPYT  142 (364)
T ss_dssp             TTCCEEEECCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCC--EEEEECCTHHHHCCGGGTTTSCCCCSSBC
T ss_pred             CCCCEEEECCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccc--eEEeccCceEEEechhhccccccCCCCCC
Confidence              999999999542      466778999999999999999998  788  998       8999999997632222235


Q ss_pred             cccCCCCCC-CCchHHHHHHHHHHHHHHHHHcC-CcEEEeCCCc-------------HHHHHHHHH--hCCCCeEEecCC
Q 044498          166 ESEAWPAEP-QDAYGLEKLATEGLCKHYTKDFE-IECRLVGEKA-------------PAAFSRKAV--TSTDNFEMWGDG  228 (366)
Q Consensus       166 e~~~~~~~p-~~~Y~~sK~~~E~~l~~~~~~~~-~~~~i~r~~~-------------~~~~~~~~~--~~~~~~~i~~~~  228 (366)
                      |+.  +..| .+.|    +.+|+++.+++..++ ++++++|+..             ...++...+  ..+.++.+++++
T Consensus       143 E~~--~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  216 (364)
T 2v6g_A          143 EDL--PRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCK  216 (364)
T ss_dssp             TTS--CCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCH
T ss_pred             ccc--cCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCc
Confidence            554  4444 5667    458999999887777 9999996321             122233333  236666667776


Q ss_pred             c---ceeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCC--cCCCC------------
Q 044498          229 K---QTRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVSINEMAEIILSFENEKLPIH--PIPGP------------  289 (366)
Q Consensus       229 ~---~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~------------  289 (366)
                      +   ...++++++|+|++++.+++++  .+++||+++++.+|+.|+++.+.+.+|.+....  ..|.+            
T Consensus       217 ~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~  296 (364)
T 2v6g_A          217 AAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVW  296 (364)
T ss_dssp             HHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHH
T ss_pred             ccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHH
Confidence            3   4477889999999999999875  467999999999999999999999999875433  33321            


Q ss_pred             ----------CC---C------------cc-cccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Q 044498          290 ----------EG---V------------RG-RNSDDTLINEELGWAPTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       290 ----------~~---~------------~~-~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  328 (366)
                                ..   .            .. ..+|++|+++ |||.|.++++++|+++++||+++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~  360 (364)
T 2v6g_A          297 EEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAY  360 (364)
T ss_dssp             HHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHc
Confidence                      00   1            22 4789999987 99999999999999999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=2.1e-36  Score=281.15  Aligned_cols=287  Identities=11%  Similarity=-0.016  Sum_probs=216.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEE-EccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFH-LVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~-~~D~~~~~~l~~~   93 (366)
                      ++|+|||||||||||++++++|+++|++         |++++|+.......       ...+++++ .+|+++.+.+.++
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   80 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGYK---------VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV   80 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE---------EEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHH
Confidence            5689999999999999999999999999         99999875432111       01346778 7999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHH-cCCCceeEEEEecccccCCCCCC-C-CCcccccC-
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM-NGVMSLTFFFVSSACIYPEFKQL-D-TDVKESEA-  169 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~r~I~~SS~~vyg~~~~~-~-~~~~e~~~-  169 (366)
                      ++++|+|||+|+....    ..++...+++|+.++.++++++.+ .+++  ||||+||.++|+..... + .++.|+.. 
T Consensus        81 ~~~~d~vih~A~~~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~--~iv~~SS~~~~~~~~~~~~~~~~~E~~~~  154 (342)
T 1y1p_A           81 IKGAAGVAHIASVVSF----SNKYDEVVTPAIGGTLNALRAAAATPSVK--RFVLTSSTVSALIPKPNVEGIYLDEKSWN  154 (342)
T ss_dssp             TTTCSEEEECCCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTCTTCC--EEEEECCGGGTCCCCTTCCCCEECTTCCC
T ss_pred             HcCCCEEEEeCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCc--EEEEeccHHHhcCCCCCCCCcccCccccC
Confidence            9999999999997642    246677899999999999999985 5788  99999999998643211 0 22344431 


Q ss_pred             -------------CCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCC--------------cHHHHHHHHHhCCC
Q 044498          170 -------------WPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEK--------------APAAFSRKAVTSTD  220 (366)
Q Consensus       170 -------------~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~--------------~~~~~~~~~~~~~~  220 (366)
                                   .+..|.+.|+.+|+++|.+++.++.++  +++++++|+.              .+..++..+.. +.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~  233 (342)
T 1y1p_A          155 LESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFN-GE  233 (342)
T ss_dssp             HHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHT-TC
T ss_pred             chhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHc-CC
Confidence                         023467889999999999999998876  6777777421              34556666665 55


Q ss_pred             CeEEecCCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccCh
Q 044498          221 NFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDD  299 (366)
Q Consensus       221 ~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  299 (366)
                      +..+++++ +.++|+|++|+|++++.+++.+ ..+.+++.++..+|+.|+++.+.+.+|.+ .+.....+.......+|+
T Consensus       234 ~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~d~  311 (342)
T 1y1p_A          234 VSPALALM-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK-TFPADFPDQGQDLSKFDT  311 (342)
T ss_dssp             CCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS-CCCCCCCCCCCCCCEECC
T ss_pred             CccccccC-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc-cCCCCCCccccccccCCh
Confidence            55555554 6789999999999999999865 23333345677899999999999999875 221111112223467799


Q ss_pred             HHHHHHcCC---CCCCCHHHHHHHHHHHHH
Q 044498          300 TLINEELGW---APTMKQKDELRITYFWIK  326 (366)
Q Consensus       300 ~k~~~~lG~---~p~~~~~e~l~~~~~~~~  326 (366)
                      +|++++|||   .+.++++++|+++++||+
T Consensus       312 ~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          312 APSLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             HHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             HHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence            999999887   566799999999999875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=2.6e-36  Score=280.47  Aligned_cols=288  Identities=13%  Similarity=0.090  Sum_probs=202.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++|+|||||||||||++|+++|+++|++         |+++.|+......       ....+++++.+|++|.+.+.+++
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYA---------VNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI   78 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCE---------EEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCE---------EEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH
Confidence            4689999999999999999999999999         9998886542110       01234688999999999999999


Q ss_pred             cCCCEEEEcccccCCccccccCc-chhhhhhHHHHHHHHHHHHHcC-CCceeEEEEeccc-ccCCCCC-CCCCcccccCC
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNH-SVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSAC-IYPEFKQ-LDTDVKESEAW  170 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~-vyg~~~~-~~~~~~e~~~~  170 (366)
                      +++|+|||+|+...   ....++ ...+++|+.++.+++++|.+.+ ++  ||||+||.+ +|+.... ...++.|+.+.
T Consensus        79 ~~~D~Vih~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~--r~V~~SS~~~~~~~~~~~~~~~~~E~~~~  153 (338)
T 2rh8_A           79 AGCDFVFHVATPVH---FASEDPENDMIKPAIQGVVNVMKACTRAKSVK--RVILTSSAAAVTINQLDGTGLVVDEKNWT  153 (338)
T ss_dssp             TTCSEEEEESSCCC---C---------CHHHHHHHHHHHHHHHHCTTCC--EEEEECCHHHHHHHHHTCSCCCCCTTTTT
T ss_pred             cCCCEEEEeCCccC---CCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcC--EEEEEecHHHeecCCcCCCCcccChhhcc
Confidence            99999999999652   222233 3478999999999999999986 88  999999987 4432111 10112554322


Q ss_pred             C------CCC-CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH---------HHHHHH---HHhCCCCeEEecCC---
Q 044498          171 P------AEP-QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP---------AAFSRK---AVTSTDNFEMWGDG---  228 (366)
Q Consensus       171 ~------~~p-~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~---------~~~~~~---~~~~~~~~~i~~~~---  228 (366)
                      +      ..| .+.|+.+|.++|.++..++..++++++++|+..+         ...+..   .+. +... .++..   
T Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~  231 (338)
T 2rh8_A          154 DIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLIT-GNEF-LINGMKGM  231 (338)
T ss_dssp             CC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHH-TCHH-HHHHHHHH
T ss_pred             chhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHc-CCcc-cccccccc
Confidence            1      122 2369999999999999988878999999864311         111211   123 2221 11111   


Q ss_pred             ---cceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCC-CCCCCcCCCCCCCcccccChHHHH
Q 044498          229 ---KQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENE-KLPIHPIPGPEGVRGRNSDDTLIN  303 (366)
Q Consensus       229 ---~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~k~~  303 (366)
                         ...++|+|++|+|++++.+++.+ .++.|++++ ..+|+.|+++.+.+..+. +.+....+. ........|++|+ 
T Consensus       232 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~-  308 (338)
T 2rh8_A          232 QMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTDFGDF-PPKSKLIISSEKL-  308 (338)
T ss_dssp             HHHHSSEEEEEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCCCTTS-CSSCSCCCCCHHH-
T ss_pred             ccccCcccEEEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCCCCCC-CcCcceeechHHH-
Confidence               12248999999999999999765 356788765 569999999999998762 322222221 1222367899999 


Q ss_pred             HHcCCCCCCCHHHHHHHHHHHHHHH
Q 044498          304 EELGWAPTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       304 ~~lG~~p~~~~~e~l~~~~~~~~~~  328 (366)
                      ++|||.|+++++++|+++++|++++
T Consensus       309 ~~lG~~p~~~l~~gl~~~~~~~~~~  333 (338)
T 2rh8_A          309 VKEGFSFKYGIEEIYDESVEYFKAK  333 (338)
T ss_dssp             HHHTCCCSCCHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCCCHHHHHHHHHHHHHHc
Confidence            6799999999999999999999865

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=4.3e-35  Score=270.27  Aligned_cols=285  Identities=16%  Similarity=0.144  Sum_probs=201.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC-CCcc--cc------ccccccceEEEccCCChhHHHhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW-NKNE--HM------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r-~~~~--~~------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++|||||||||||++++++|+++|++         |+++.| +...  ..      .....++.++.+|++|.+.+.++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   71 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYS---------VNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAA   71 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHH
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCE---------EEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHH
Confidence            468999999999999999999999999         999888 4321  00      00112457889999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCc-chhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNH-SVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      ++++|+|||+|+...   ....++ ...+++|+.++.+++++|.+. +++  ||||+||.+++........++.|+.+.+
T Consensus        72 ~~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~--~iV~~SS~~~~~~~~~~~~~~~e~~~~~  146 (322)
T 2p4h_X           72 IEGCVGIFHTASPID---FAVSEPEEIVTKRTVDGALGILKACVNSKTVK--RFIYTSSGSAVSFNGKDKDVLDESDWSD  146 (322)
T ss_dssp             HTTCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHTTCSSCC--EEEEEEEGGGTSCSSSCCSEECTTCCCC
T ss_pred             HcCCCEEEEcCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc--EEEEeccHHHcccCCCCCeecCCccccc
Confidence            999999999997531   222232 448899999999999999988 788  9999999874432221111124433111


Q ss_pred             ------CCCCC-chHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH---------HHHHHH---HHhCCCCeEEecCCccee
Q 044498          172 ------AEPQD-AYGLEKLATEGLCKHYTKDFEIECRLVGEKAP---------AAFSRK---AVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       172 ------~~p~~-~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~---------~~~~~~---~~~~~~~~~i~~~~~~~~  232 (366)
                            ..|.+ .|+.+|+++|.++.+++..++++++++|+..+         ...+..   .+. +....+ +.  ...
T Consensus       147 ~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~-g~~~~~-~~--~~~  222 (322)
T 2p4h_X          147 VDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVL-GKKEQI-GV--TRF  222 (322)
T ss_dssp             HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHH-SCGGGC-CE--EEE
T ss_pred             hhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHh-CCCccC-cC--CCc
Confidence                  12333 69999999999999988888999999864321         112221   233 332222 22  234


Q ss_pred             eeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCC-CCCCC--cCCCCCCCcccccChHHHHHHcCC
Q 044498          233 SLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENE-KLPIH--PIPGPEGVRGRNSDDTLINEELGW  308 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~--~~~~~~~~~~~~~~~~k~~~~lG~  308 (366)
                      +|+|++|+|++++.+++.+ ..+.|| ++++.+|+.|+++.+.+..+. +.+..  ..+ ........+|++|+ ++|||
T Consensus       223 ~~i~v~Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~-~~lG~  299 (322)
T 2p4h_X          223 HMVHVDDVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQILTVDELKE-IKGARLPDLNTKKL-VDAGF  299 (322)
T ss_dssp             EEEEHHHHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTT-CCCEECCEECCHHH-HHTTC
T ss_pred             CEEEHHHHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCCCCCCccccC-CCCCcceecccHHH-HHhCC
Confidence            8999999999999999765 234588 567889999999999987742 22211  111 11124467899999 66999


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q 044498          309 APTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       309 ~p~~~~~e~l~~~~~~~~~~  328 (366)
                      .|+++++++|+++++|++++
T Consensus       300 ~p~~~~~~~l~~~~~~~~~~  319 (322)
T 2p4h_X          300 DFKYTIEDMFDDAIQCCKEK  319 (322)
T ss_dssp             CCCCCHHHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHhc
Confidence            99999999999999999864

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=2.6e-33  Score=252.31  Aligned_cols=257  Identities=16%  Similarity=0.108  Sum_probs=201.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC--CCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG--VDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~--~d~vi  101 (366)
                      |+|||||||||||++++++|++ |++         |++++|.....     .+   +.+|+++++.+.+++++  +|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~---------V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi   62 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHE---------VIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVII   62 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSC---------EEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCe---------EEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEE
Confidence            4799999999999999999995 899         99999876432     12   88999999999998875  99999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+||.... .....++...+++|+.++.++++++++.++   ||||+||.++|+.... +  +.|+.  +..|.+.|+.+
T Consensus        63 ~~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~iv~~SS~~~~~~~~~-~--~~e~~--~~~~~~~Y~~s  133 (273)
T 2ggs_A           63 NAAAMTDV-DKCEIEKEKAYKINAEAVRHIVRAGKVIDS---YIVHISTDYVFDGEKG-N--YKEED--IPNPINYYGLS  133 (273)
T ss_dssp             ECCCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTC---EEEEEEEGGGSCSSSC-S--BCTTS--CCCCSSHHHHH
T ss_pred             ECCcccCh-hhhhhCHHHHHHHhHHHHHHHHHHHHHhCC---eEEEEecceeEcCCCC-C--cCCCC--CCCCCCHHHHH
Confidence            99996531 122346677899999999999999998875   7999999999986543 2  35554  67788999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCCc-------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCCCC
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEKA-------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFRE  254 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  254 (366)
                      |+++|.+++.      ++++++|...       ...++..+.. +..+.+.++   .++++|++|+|+++..+++.+.++
T Consensus       134 K~~~e~~~~~------~~~~~iR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~~g  203 (273)
T 2ggs_A          134 KLLGETFALQ------DDSLIIRTSGIFRNKGFPIYVYKTLKE-GKTVFAFKG---YYSPISARKLASAILELLELRKTG  203 (273)
T ss_dssp             HHHHHHHHCC------TTCEEEEECCCBSSSSHHHHHHHHHHT-TCCEEEESC---EECCCBHHHHHHHHHHHHHHTCCE
T ss_pred             HHHHHHHHhC------CCeEEEeccccccccHHHHHHHHHHHc-CCCEEeecC---CCCceEHHHHHHHHHHHHhcCcCC
Confidence            9999998866      5667776442       2233343333 566666554   789999999999999999887677


Q ss_pred             cEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC-----CCCCCcccccChHHHHHHcCCCC-CCCHHHHH
Q 044498          255 PLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-----GPEGVRGRNSDDTLINEELGWAP-TMKQKDEL  318 (366)
Q Consensus       255 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-----~~~~~~~~~~~~~k~~~~lG~~p-~~~~~e~l  318 (366)
                      +||+++ +.+|+.|+++.+.+.+|.+.++...+     .+.......+|++|++++|||+| .+++++++
T Consensus       204 ~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          204 IIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             EEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             eEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            999998 99999999999999999875532210     11223456789999999999999 67888764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-32  Score=251.43  Aligned_cols=268  Identities=13%  Similarity=0.060  Sum_probs=196.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |||||||||||||++|+++|+++||+         |++++|++...         .+..|    +.....++++|+|||+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~---------V~~l~R~~~~~---------~~~~~----~~~~~~l~~~d~vihl   58 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHE---------VTLVSRKPGPG---------RITWD----ELAASGLPSCDAAVNL   58 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCCTT---------EEEHH----HHHHHCCCSCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCCCcC---------eeecc----hhhHhhccCCCEEEEe
Confidence            68999999999999999999999999         99999975431         12222    2233457899999999


Q ss_pred             ccccCCc---cccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHH
Q 044498          104 AADMGGM---GFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       104 a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      |+..-..   .+.......++..|+.++.+|++++...+.+..+||++||.++||.....+.  .|+.  +..|.+.|+.
T Consensus        59 a~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~--~E~~--p~~~~~~~~~  134 (298)
T 4b4o_A           59 AGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEY--DEDS--PGGDFDFFSN  134 (298)
T ss_dssp             CCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCB--CTTC--CCSCSSHHHH
T ss_pred             ccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcc--cccC--CccccchhHH
Confidence            9853211   1112233456889999999999999988765225899999999998876653  5554  7778888888


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEeCCC--------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          181 EKLATEGLCKHYTKDFEIECRLVGEK--------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~~~~i~r~~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                      .+...|...  .....+++++++|+.        .+..++..... +. ....+++++.++|||++|+++++..+++++ 
T Consensus       135 ~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~-~~-~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~  210 (298)
T 4b4o_A          135 LVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRL-GL-GGPIGSGHQFFPWIHIGDLAGILTHALEANH  210 (298)
T ss_dssp             HHHHHHHHH--CCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHT-TC-CCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHH--HhhccCCceeeeeeeeEEcCCCCchhHHHHHHhc-CC-cceecccCceeecCcHHHHHHHHHHHHhCCC
Confidence            887777542  234457888888643        22333333332 33 344589999999999999999999999886 


Q ss_pred             CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-----C-------CcccccChHHHHHHcCCCCCC-CHHHHH
Q 044498          252 FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-----G-------VRGRNSDDTLINEELGWAPTM-KQKDEL  318 (366)
Q Consensus       252 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~-------~~~~~~~~~k~~~~lG~~p~~-~~~e~l  318 (366)
                      ..++||+++++++|+.|+++.|.+.+|++..+ ..|...     +       ......+++|++ ++||++++ +++++|
T Consensus       211 ~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~-pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~-~~Gf~f~yp~l~~al  288 (298)
T 4b4o_A          211 VHGVLNGVAPSSATNAEFAQTFGAALGRRAFI-PLPSAVVQAVFGRQRAIMLLEGQKVIPRRTL-ATGYQYSFPELGAAL  288 (298)
T ss_dssp             CCEEEEESCSCCCBHHHHHHHHHHHHTCCCCC-CBCHHHHHHHHCHHHHHHHHCCCCBCCHHHH-HTTCCCSCCSHHHHH
T ss_pred             CCCeEEEECCCccCHHHHHHHHHHHhCcCCcc-cCCHHHHHHHhcchhHHHhhCCCEEcHHHHH-HCCCCCCCCCHHHHH
Confidence            57799999999999999999999999986432 222110     0       012345678884 59999998 699999


Q ss_pred             HHHHH
Q 044498          319 RITYF  323 (366)
Q Consensus       319 ~~~~~  323 (366)
                      ++.++
T Consensus       289 ~~l~~  293 (298)
T 4b4o_A          289 KEIAE  293 (298)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=8.8e-33  Score=250.72  Aligned_cols=252  Identities=15%  Similarity=0.114  Sum_probs=200.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |+|||||||||||++++++|+++  |++         |++++|+..........+++++.+|++|++.+.++++++|+||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~---------V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi   71 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQ---------IIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLL   71 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGG---------EEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCe---------EEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEE
Confidence            57999999999999999999998  999         9999997654332223467899999999999999999999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+|+...       .  .  ..|+.++.++++++++.+++  ||||+||.++|..                  ...|+.+
T Consensus        72 ~~a~~~~-------~--~--~~n~~~~~~l~~a~~~~~~~--~~v~~Ss~~~~~~------------------~~~y~~~  120 (287)
T 2jl1_A           72 FISGPHY-------D--N--TLLIVQHANVVKAARDAGVK--HIAYTGYAFAEES------------------IIPLAHV  120 (287)
T ss_dssp             ECCCCCS-------C--H--HHHHHHHHHHHHHHHHTTCS--EEEEEEETTGGGC------------------CSTHHHH
T ss_pred             EcCCCCc-------C--c--hHHHHHHHHHHHHHHHcCCC--EEEEECCCCCCCC------------------CCchHHH
Confidence            9999421       1  1  57999999999999999999  9999999877521                  1269999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCCcHHH-----HHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCC
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEKAPAA-----FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FRE  254 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~  254 (366)
                      |..+|++++.    .+++++++|+..+..     ++...+..+ ... .+.+++.++++|++|+|+++..+++.+  .++
T Consensus       121 K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~  194 (287)
T 2jl1_A          121 HLATEYAIRT----TNIPYTFLRNALYTDFFVNEGLRASTESG-AIV-TNAGSGIVNSVTRNELALAAATVLTEEGHENK  194 (287)
T ss_dssp             HHHHHHHHHH----TTCCEEEEEECCBHHHHSSGGGHHHHHHT-EEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTE
T ss_pred             HHHHHHHHHH----cCCCeEEEECCEeccccchhhHHHHhhCC-cee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCCc
Confidence            9999998864    589999998765422     233334323 222 455677889999999999999999875  467


Q ss_pred             cEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC--------CC-----------------cccccChHHHHHHcCCC
Q 044498          255 PLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE--------GV-----------------RGRNSDDTLINEELGWA  309 (366)
Q Consensus       255 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--------~~-----------------~~~~~~~~k~~~~lG~~  309 (366)
                      +||+++++.+|+.|+++.+.+.+|.+.++...|...        +.                 .....|.+|+++.||  
T Consensus       195 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--  272 (287)
T 2jl1_A          195 TYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--  272 (287)
T ss_dssp             EEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--
T ss_pred             EEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--
Confidence            999999999999999999999999886655544210        00                 123457889999999  


Q ss_pred             CCCCHHHHHHHHHH
Q 044498          310 PTMKQKDELRITYF  323 (366)
Q Consensus       310 p~~~~~e~l~~~~~  323 (366)
                      |.++++++|+++++
T Consensus       273 ~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          273 SLTPLKETVKQALK  286 (287)
T ss_dssp             SCCCHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHhc
Confidence            77899999998875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.4e-32  Score=249.16  Aligned_cols=253  Identities=13%  Similarity=0.110  Sum_probs=196.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           25 RISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      +|||||||||||++++++|+++  |++         |++++|++.........+++++.+|++|++++.++++++|+|||
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQ---------IVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGG---------EEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCce---------EEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEE
Confidence            5999999999999999999998  999         99999976543322234678999999999999999999999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+...             ..|+.++.++++++++.+++  ||||+||.++|.    .              ...|+.+|
T Consensus        72 ~a~~~~-------------~~~~~~~~~l~~a~~~~~~~--~~v~~Ss~~~~~----~--------------~~~y~~sK  118 (286)
T 2zcu_A           72 ISSSEV-------------GQRAPQHRNVINAAKAAGVK--FIAYTSLLHADT----S--------------PLGLADEH  118 (286)
T ss_dssp             CC---------------------CHHHHHHHHHHHHTCC--EEEEEEETTTTT----C--------------CSTTHHHH
T ss_pred             eCCCCc-------------hHHHHHHHHHHHHHHHcCCC--EEEEECCCCCCC----C--------------cchhHHHH
Confidence            999421             14788999999999999999  999999987761    1              13699999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCCcHHH----HHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcE
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEKAPAA----FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPL  256 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~  256 (366)
                      ..+|.+++.    .+++++++|+..+..    ++..... ...+. .+.+++.++++|++|+|+++..++..+  .+++|
T Consensus       119 ~~~e~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~  192 (286)
T 2zcu_A          119 IETEKMLAD----SGIVYTLLRNGWYSENYLASAPAALE-HGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVY  192 (286)
T ss_dssp             HHHHHHHHH----HCSEEEEEEECCBHHHHHTTHHHHHH-HTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEE
T ss_pred             HHHHHHHHH----cCCCeEEEeChHHhhhhHHHhHHhhc-CCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceE
Confidence            999998865    489999998765432    2333443 23343 456678899999999999999999875  57899


Q ss_pred             EecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC--------CC-----------------cccccChHHHHHHcCCCCC
Q 044498          257 NIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE--------GV-----------------RGRNSDDTLINEELGWAPT  311 (366)
Q Consensus       257 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--------~~-----------------~~~~~~~~k~~~~lG~~p~  311 (366)
                      |+++++.+|+.|+++.+.+.+|.+.++...|...        +.                 .....+.+++++.||| |.
T Consensus       193 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~  271 (286)
T 2zcu_A          193 ELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGH-PT  271 (286)
T ss_dssp             EECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTS-CC
T ss_pred             EEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCc-CC
Confidence            9999999999999999999999886655444210        11                 1134578899999997 66


Q ss_pred             CCHHHHHHHHHHHHH
Q 044498          312 MKQKDELRITYFWIK  326 (366)
Q Consensus       312 ~~~~e~l~~~~~~~~  326 (366)
                      ++++++|+++++||.
T Consensus       272 ~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          272 TTLAESVSHLFNVNN  286 (286)
T ss_dssp             CCHHHHHHGGGC---
T ss_pred             CCHHHHHHHHHhhcC
Confidence            699999999999874

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.1e-32  Score=265.35  Aligned_cols=273  Identities=15%  Similarity=0.118  Sum_probs=198.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ||+|||||||||||++|++.|+++|++         |++++|+....        ..+.+|+.+.  +..+++++|+|||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~---------V~~l~R~~~~~--------~~v~~d~~~~--~~~~l~~~D~Vih  207 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHE---------VIQLVRKEPKP--------GKRFWDPLNP--ASDLLDGADVLVH  207 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESSSCCT--------TCEECCTTSC--CTTTTTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCCCCc--------cceeecccch--hHHhcCCCCEEEE
Confidence            689999999999999999999999999         99999986542        3467787753  4566789999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHH-HHHcCCCceeEEEEecccccC-CCCCCCCCcccccCCCCCCCCchHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEA-ARMNGVMSLTFFFVSSACIYP-EFKQLDTDVKESEAWPAEPQDAYGL  180 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a-~~~~~~~~~r~I~~SS~~vyg-~~~~~~~~~~e~~~~~~~p~~~Y~~  180 (366)
                      +|+..........+....+++|+.++.+|+++ ++..+++  +|||+||.++|| .....+  +.|+.  +. |.+.|+.
T Consensus       208 ~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~--r~V~~SS~~vyg~~~~~~~--~~E~~--~~-~~~~y~~  280 (516)
T 3oh8_A          208 LAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCT--TMISASAVGFYGHDRGDEI--LTEES--ES-GDDFLAE  280 (516)
T ss_dssp             CCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCC--EEEEEEEGGGGCSEEEEEE--ECTTS--CC-CSSHHHH
T ss_pred             CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCC--EEEEeCcceEecCCCCCCc--cCCCC--CC-CcChHHH
Confidence            99976432233445667889999999999999 6667788  999999999999 333222  35544  33 7889999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEeCCCcH--------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          181 EKLATEGLCKHYTKDFEIECRLVGEKAP--------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       181 sK~~~E~~l~~~~~~~~~~~~i~r~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                      +|...|..+.. ....+++++++|+..+        ..++. .+..+.. .+.+++.+.++|+|++|+|++++.+++++ 
T Consensus       281 ~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~-~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~  357 (516)
T 3oh8_A          281 VCRDWEHATAP-ASDAGKRVAFIRTGVALSGRGGMLPLLKT-LFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ  357 (516)
T ss_dssp             HHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTBSHHHHHHH-TTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCCChHHHHHH-HHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc
Confidence            99999987654 4566999999975422        22222 2222333 35588889999999999999999999876 


Q ss_pred             CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-----CC--------cccccChHHHHHHcCCCCCCC-HHHH
Q 044498          252 FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-----GV--------RGRNSDDTLINEELGWAPTMK-QKDE  317 (366)
Q Consensus       252 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~~--------~~~~~~~~k~~~~lG~~p~~~-~~e~  317 (366)
                      .+++||+++++.+|+.|+++.+.+.+|.+..+ ..|...     +.        .....+++|++ +|||.|+++ ++++
T Consensus       358 ~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~-~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l~e~  435 (516)
T 3oh8_A          358 ISGPINAVAPNPVSNADMTKILATSMHRPAFI-QIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYTDIGAA  435 (516)
T ss_dssp             CCEEEEESCSCCEEHHHHHHHTTC----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCSSHHHH
T ss_pred             cCCcEEEECCCCCCHHHHHHHHHHHhCCCCCC-CCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCCCHHHH
Confidence            56799999999999999999999999986522 222210     11        12235778887 699999996 9999


Q ss_pred             HHHHHHHHH
Q 044498          318 LRITYFWIK  326 (366)
Q Consensus       318 l~~~~~~~~  326 (366)
                      |++++++.+
T Consensus       436 l~~~l~~~~  444 (516)
T 3oh8_A          436 IAHELGYEQ  444 (516)
T ss_dssp             HHHHHTCCC
T ss_pred             HHHHhCccc
Confidence            999988643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.98  E-value=1.6e-31  Score=256.18  Aligned_cols=284  Identities=14%  Similarity=0.130  Sum_probs=209.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------------------ccccccceEEEcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------------------MEDMFCHEFHLVD   83 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------------------~~~~~~v~~~~~D   83 (366)
                      .+|+|||||||||||++|+++|++.|++         |++++|+.....                  .....++.++.+|
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~D  138 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHR---------IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGD  138 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEE---------EEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEC
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCE---------EEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCC
Confidence            5679999999999999999999989999         999999876210                  1112467999999


Q ss_pred             CCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC---CC
Q 044498           84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK---QL  160 (366)
Q Consensus        84 ~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~---~~  160 (366)
                      +++.+.+. .+.++|+|||+|+...    ...++...+++|+.++.+++++|.+ +++  +|||+||.++ |...   ..
T Consensus       139 l~d~~~l~-~~~~~d~Vih~A~~~~----~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~--~~v~~SS~~~-G~~~~~~~~  209 (427)
T 4f6c_A          139 FECMDDVV-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ-HHA--RLIYVSTISV-GTYFDIDTE  209 (427)
T ss_dssp             C---CCCC-CSSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHH-TTC--EEEEEEEGGG-GSEECSSCS
T ss_pred             CCCcccCC-CcCCCCEEEECCcccC----CCCCHHHHHHHHHHHHHHHHHHHHh-cCC--cEEEECchHh-CCCccCCCC
Confidence            99988777 6789999999999764    2356678899999999999999999 778  9999999988 4421   11


Q ss_pred             CCCcccccCC-CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc------------------HHHHHHHHHhCCCC
Q 044498          161 DTDVKESEAW-PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA------------------PAAFSRKAVTSTDN  221 (366)
Q Consensus       161 ~~~~~e~~~~-~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~------------------~~~~~~~~~~~~~~  221 (366)
                      ..++.|+... +..|.+.|+.+|+++|.+++.++. .+++++++|+..                  +..++..+.. ...
T Consensus       210 ~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  287 (427)
T 4f6c_A          210 DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ-LDC  287 (427)
T ss_dssp             CCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHH-SSE
T ss_pred             CccccccccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHh-cCC
Confidence            2234555422 245899999999999999999764 689999996321                  4456666665 444


Q ss_pred             eEEecCCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC----------
Q 044498          222 FEMWGDGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE----------  290 (366)
Q Consensus       222 ~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----------  290 (366)
                      +.. +.++..++|++++|+|++++.++..+ .+++||+++++++++.|+++.+.+ +|    +...+.+.          
T Consensus       288 ~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g----~~~~~~~~~~~~l~~~~~  361 (427)
T 4f6c_A          288 IGV-SMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE----IELVSDESFNEILQKQDM  361 (427)
T ss_dssp             EEH-HHHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC----CEEECHHHHHHHHHHTTC
T ss_pred             CCC-ccccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC----CcccCHHHHHHHHHhcCc
Confidence            443 34578899999999999999999876 789999999999999999999998 55    11222111          


Q ss_pred             -----------CCcccccChHHHH---HHcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 044498          291 -----------GVRGRNSDDTLIN---EELGWAPTMKQKDELRITYFWIKEQVEK  331 (366)
Q Consensus       291 -----------~~~~~~~~~~k~~---~~lG~~p~~~~~e~l~~~~~~~~~~~~~  331 (366)
                                 ......+|.++..   +.+||.+...-++.++.+++|+++...+
T Consensus       362 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~~~  416 (427)
T 4f6c_A          362 YETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFNK  416 (427)
T ss_dssp             HHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHC-
T ss_pred             hhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhh
Confidence                       0112345666655   5579987766677999999999998643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.98  E-value=1.6e-32  Score=240.51  Aligned_cols=222  Identities=15%  Similarity=0.113  Sum_probs=170.5

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      |.+||+|||||||||||++++++|+++|++         |++++|+....... ..+++++.+|++|.+++.++++++|+
T Consensus         1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~   70 (227)
T 3dhn_A            1 MEKVKKIVLIGASGFVGSALLNEALNRGFE---------VTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADA   70 (227)
T ss_dssp             --CCCEEEEETCCHHHHHHHHHHHHTTTCE---------EEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSE
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCE---------EEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCE
Confidence            345789999999999999999999999999         99999987654332 24679999999999999999999999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |||+|+..      . +....++.|+.++.++++++++.+++  ||||+||.++|+.....+   .+++  +..|.+.|+
T Consensus        71 vi~~a~~~------~-~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~~~~~~~~~---~~~~--~~~p~~~Y~  136 (227)
T 3dhn_A           71 VISAFNPG------W-NNPDIYDETIKVYLTIIDGVKKAGVN--RFLMVGGAGSLFIAPGLR---LMDS--GEVPENILP  136 (227)
T ss_dssp             EEECCCC-------------CCSHHHHHHHHHHHHHHHTTCS--EEEEECCSTTSEEETTEE---GGGT--TCSCGGGHH
T ss_pred             EEEeCcCC------C-CChhHHHHHHHHHHHHHHHHHHhCCC--EEEEeCChhhccCCCCCc---cccC--CcchHHHHH
Confidence            99999853      1 22337889999999999999999999  999999998776544332   3333  667899999


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCCcHHH-H--HHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCC
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEKAPAA-F--SRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FRE  254 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~-~--~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~  254 (366)
                      .+|+.+|.+++.++.+.+++++++|+..+.. .  ...... +....+. .+.. ++++|++|+|+++..+++++  .++
T Consensus       137 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~-~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~  213 (227)
T 3dhn_A          137 GVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRL-GKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKHHQE  213 (227)
T ss_dssp             HHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCEE-ESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCCCSE
T ss_pred             HHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccccceee-cCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccccCc
Confidence            9999999999998878899999998765310 0  000011 1111221 1222 78999999999999999986  589


Q ss_pred             cEEecCCCcccHHH
Q 044498          255 PLNIGSDEMVSINE  268 (366)
Q Consensus       255 ~~~i~~~~~~s~~e  268 (366)
                      .|+++++++.++.+
T Consensus       214 ~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          214 RFTIGYLEHHHHHH  227 (227)
T ss_dssp             EEEEECCSCCC---
T ss_pred             EEEEEeehhcccCC
Confidence            99999999888753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=1.5e-31  Score=261.73  Aligned_cols=287  Identities=14%  Similarity=0.125  Sum_probs=211.3

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------------------ccccccceEEE
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------------------MEDMFCHEFHL   81 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------------------~~~~~~v~~~~   81 (366)
                      +..||+|||||||||||++|+++|++.|++         |++++|......                  .....+++++.
T Consensus       147 ~~~~~~VLVTGatG~iG~~l~~~L~~~g~~---------V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~  217 (508)
T 4f6l_B          147 HRPLGNTLLTGATGFLGAYLIEALQGYSHR---------IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIV  217 (508)
T ss_dssp             BCCCEEEEESCTTSHHHHHHHHHTBTTEEE---------EEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEE
T ss_pred             cCCCCeEEEECCccchHHHHHHHHHhcCCE---------EEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEe
Confidence            346789999999999999999999888999         999999876210                  11234679999


Q ss_pred             ccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC---
Q 044498           82 VDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK---  158 (366)
Q Consensus        82 ~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~---  158 (366)
                      +|+.+++.+. ...++|+|||+|+.+.    ...++...+.+|+.++.+++++|.+ +.+  +|||+||.++ |...   
T Consensus       218 ~Dl~d~~~l~-~~~~~D~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~--~~v~iSS~~v-G~~~~~~  288 (508)
T 4f6l_B          218 GDFECMDDVV-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ-HHA--RLIYVSTISV-GTYFDID  288 (508)
T ss_dssp             EBTTBCSSCC-CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHT-TTC--EEEEEEESCT-TSEECTT
T ss_pred             cCCcccccCC-CccCCCEEEECCceec----CCCCHHHHhhhHHHHHHHHHHHHHh-CCC--cEEEeCChhh-ccCCccC
Confidence            9999987777 6789999999999763    2446677889999999999999998 667  9999999998 4321   


Q ss_pred             CCCCCcccccCC-CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc------------------HHHHHHHHHhCC
Q 044498          159 QLDTDVKESEAW-PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA------------------PAAFSRKAVTST  219 (366)
Q Consensus       159 ~~~~~~~e~~~~-~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~------------------~~~~~~~~~~~~  219 (366)
                      ....++.|++.. +..|.+.|+.+|+.+|+++..++. .|++++++|+..                  +..++..+.. .
T Consensus       289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~-~  366 (508)
T 4f6l_B          289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ-L  366 (508)
T ss_dssp             CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTT-C
T ss_pred             CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHH-c
Confidence            122234555422 245789999999999999999765 699999997421                  3455555554 3


Q ss_pred             CCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC--------
Q 044498          220 DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE--------  290 (366)
Q Consensus       220 ~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--------  290 (366)
                      ..++. +.+++.++|++++|+|++++.++..+ .+++||+++++++++.|+++.+.+..     +...+.+.        
T Consensus       367 ~~~~~-~~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-----~~~~~~~~w~~~l~~~  440 (508)
T 4f6l_B          367 DCIGV-SMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-----IELVSDESFNEILQKQ  440 (508)
T ss_dssp             SEEET-TGGGSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-----CEEECHHHHHHHHHTT
T ss_pred             CCCCC-CccCceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-----CcccCHHHHHHHHHhc
Confidence            44333 34678899999999999999999876 68999999999999999999999754     11111100        


Q ss_pred             -------------CCcccccChHHHH---HHcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 044498          291 -------------GVRGRNSDDTLIN---EELGWAPTMKQKDELRITYFWIKEQVEKE  332 (366)
Q Consensus       291 -------------~~~~~~~~~~k~~---~~lG~~p~~~~~e~l~~~~~~~~~~~~~~  332 (366)
                                   ......+|.++..   +.+||.+....++.++.+++|+++...+.
T Consensus       441 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~~~~  498 (508)
T 4f6l_B          441 DMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFNKA  498 (508)
T ss_dssp             CCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHC--
T ss_pred             CCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence                         0112345555554   45799877666889999999999986433

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=1.2e-31  Score=240.79  Aligned_cols=235  Identities=20%  Similarity=0.166  Sum_probs=189.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ||+|||||||||||++++++|+++|++         |++++|.......   .++.++.+|+++.+.+.++++++|+|||
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~d~vi~   69 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHE---------VRLSDIVDLGAAE---AHEEIVACDLADAQAVHDLVKDCDGIIH   69 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEE---------EEECCSSCCCCCC---TTEEECCCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCE---------EEEEeCCCccccC---CCccEEEccCCCHHHHHHHHcCCCEEEE
Confidence            568999999999999999999999999         9999998654322   3468899999999999999999999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+...     ..+....+++|+.++.++++++++.+++  ||||+||..+|+..... .++.|+.  +..|.+.|+.+|
T Consensus        70 ~a~~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~--~iv~~SS~~~~~~~~~~-~~~~E~~--~~~~~~~Y~~sK  139 (267)
T 3ay3_A           70 LGGVSV-----ERPWNDILQANIIGAYNLYEAARNLGKP--RIVFASSNHTIGYYPRT-TRIDTEV--PRRPDSLYGLSK  139 (267)
T ss_dssp             CCSCCS-----CCCHHHHHHHTHHHHHHHHHHHHHTTCC--EEEEEEEGGGSTTSBTT-SCBCTTS--CCCCCSHHHHHH
T ss_pred             CCcCCC-----CCCHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeCCHHHhCCCCCC-CCCCCCC--CCCCCChHHHHH
Confidence            999642     3345677899999999999999999998  99999999999875422 1235554  778899999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCC--CCcEEecC
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF--REPLNIGS  260 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~i~~  260 (366)
                      +.+|.+++.+...++++++++|+..+.       .  .+    .++...++++|++|+|+++..+++.+.  .++|++.+
T Consensus       140 ~~~e~~~~~~~~~~gi~~~~lrp~~v~-------~--~~----~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~  206 (267)
T 3ay3_A          140 CFGEDLASLYYHKFDIETLNIRIGSCF-------P--KP----KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGAS  206 (267)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEEECBCS-------S--SC----CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeceeec-------C--CC----CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCC
Confidence            999999999888889999999877642       0  11    133456789999999999999998763  35677654


Q ss_pred             CCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHHHHHcCCCCCCCHHHHHHHHHH
Q 044498          261 DEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYF  323 (366)
Q Consensus       261 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~  323 (366)
                      +.                              .....+..++ +.|||.|+++++++++++++
T Consensus       207 ~~------------------------------~~~~~d~~~~-~~lg~~p~~~~~~~~~~~~~  238 (267)
T 3ay3_A          207 AN------------------------------TESWWDNDKS-AFLGWVPQDSSEIWREEIEQ  238 (267)
T ss_dssp             SC------------------------------SSCCBCCGGG-GGGCCCCCCCGGGGHHHHHH
T ss_pred             Cc------------------------------cccccCHHHH-HHcCCCCCCCHHHHHHHHHh
Confidence            32                              1234566777 88999999999999887654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=6.1e-31  Score=245.15  Aligned_cols=269  Identities=13%  Similarity=0.081  Sum_probs=195.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+|+|||||||||||++|++.|++.|++         |++++|+.....       .....+++++.+|++|.+++.+++
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~---------V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~   79 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRP---------TYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKIL   79 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCC---------EEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCC---------EEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHH
Confidence            4578999999999999999999999999         999999863211       112357899999999999999999


Q ss_pred             c--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           95 S--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        95 ~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      +  ++|+|||+|+.                .|+.++.+++++|++.+ ++  +||+ |   +||...      .|+  .+
T Consensus        80 ~~~~~d~Vi~~a~~----------------~n~~~~~~l~~aa~~~g~v~--~~v~-S---~~g~~~------~e~--~~  129 (346)
T 3i6i_A           80 KEHEIDIVVSTVGG----------------ESILDQIALVKAMKAVGTIK--RFLP-S---EFGHDV------NRA--DP  129 (346)
T ss_dssp             HHTTCCEEEECCCG----------------GGGGGHHHHHHHHHHHCCCS--EEEC-S---CCSSCT------TTC--CC
T ss_pred             hhCCCCEEEECCch----------------hhHHHHHHHHHHHHHcCCce--EEee-c---ccCCCC------Ccc--Cc
Confidence            9  99999999994                27889999999999999 99  8886 4   365321      222  25


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHH-----HHHHH--HhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          172 AEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAA-----FSRKA--VTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       172 ~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~-----~~~~~--~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                      ..|.+.|+.+|+.+|+++++    .+++++++|++.+..     +....  ......+.+++++++.++|++++|+|+++
T Consensus       130 ~~p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~  205 (346)
T 3i6i_A          130 VEPGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFT  205 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHH
Confidence            67788999999999998875    489999998653321     11111  11355678889999999999999999999


Q ss_pred             HHHHhcC--CCCcEEecC-CCcccHHHHHHHHHHhcCCCCCCCcCCCCCC--------Cc-------------------c
Q 044498          245 LRLIKSD--FREPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIPGPEG--------VR-------------------G  294 (366)
Q Consensus       245 ~~~l~~~--~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~--------~~-------------------~  294 (366)
                      ..++..+  .+++|++.+ ++.+|+.|+++.+.+.+|.+.++...+....        .+                   .
T Consensus       206 ~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~  285 (346)
T 3i6i_A          206 MKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNF  285 (346)
T ss_dssp             HHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSS
T ss_pred             HHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCccc
Confidence            9999875  478899985 5899999999999999999877655543110        00                   0


Q ss_pred             cc--cChHHHHHHc-CCCCCCCHHHHHHHHHHHHHHHHHHhhh
Q 044498          295 RN--SDDTLINEEL-GWAPTMKQKDELRITYFWIKEQVEKEKA  334 (366)
Q Consensus       295 ~~--~~~~k~~~~l-G~~p~~~~~e~l~~~~~~~~~~~~~~~~  334 (366)
                      ..  .+..++.+.+ ++++ ++++|.|++++.|++++......
T Consensus       286 ~~~~~~~~~~~~~~p~~~~-t~~~e~l~~~~~~~~~~~~~~~~  327 (346)
T 3i6i_A          286 SIDGPEDVEVTTLYPEDSF-RTVEECFGEYIVKMEEKQPTADS  327 (346)
T ss_dssp             CCCSTTEEEHHHHSTTCCC-CCHHHHHHHHHCC----------
T ss_pred             ccCCCCcccHHHhCCCCCc-CcHHHHHHHHHHHhhcccccccc
Confidence            00  1112244443 4444 49999999999999998754443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=6.9e-30  Score=247.93  Aligned_cols=240  Identities=12%  Similarity=0.048  Sum_probs=186.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHc---CCCCCCCCCccEEEEEeCCCcccccc---------------------cccc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSE---RHYSTSIPNALYIIASDWNKNEHMME---------------------DMFC   76 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~~~~~~~~~~V~~~~r~~~~~~~~---------------------~~~~   76 (366)
                      ..+|+|||||||||||++|+++|+++   |++         |++++|........                     ...+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~---------V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  141 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGR---------LICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADR  141 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCE---------EEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCE---------EEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCc
Confidence            36789999999999999999999999   899         99999986532100                     1246


Q ss_pred             ceEEEccCC------ChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           77 HEFHLVDLR------VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        77 v~~~~~D~~------~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ++++.+|++      +.+.+.++++++|+|||+|+....     .+....+++|+.++.+++++|.+.+++  +|||+||
T Consensus       142 v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~~~~~--~~V~iSS  214 (478)
T 4dqv_A          142 LEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALTTKLK--PFTYVST  214 (478)
T ss_dssp             EEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTSSSCC--CEEEEEE
T ss_pred             eEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEee
Confidence            799999998      666788888999999999997642     566778999999999999999999999  9999999


Q ss_pred             ccccCCCCCCCCCcccccCCCCCC-----------CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCc------------
Q 044498          151 ACIYPEFKQLDTDVKESEAWPAEP-----------QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA------------  207 (366)
Q Consensus       151 ~~vyg~~~~~~~~~~e~~~~~~~p-----------~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~------------  207 (366)
                      .++|+.....+.  .|+.  +..|           .+.|+.+|+.+|.+++.++.+.+++++++|+..            
T Consensus       215 ~~v~~~~~~~~~--~E~~--~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~  290 (478)
T 4dqv_A          215 ADVGAAIEPSAF--TEDA--DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLN  290 (478)
T ss_dssp             GGGGTTSCTTTC--CSSS--CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCC
T ss_pred             hhhcCccCCCCc--CCcc--cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCC
Confidence            999997655432  5544  2222           245999999999999999988899999986321            


Q ss_pred             ----HHHHHHHHHhCCCC-eEEecC------CcceeeeeeHHHHHHHHHHHHhc------CCCCcEEecCCCc--ccHHH
Q 044498          208 ----PAAFSRKAVTSTDN-FEMWGD------GKQTRSLTFIDECVEGVLRLIKS------DFREPLNIGSDEM--VSINE  268 (366)
Q Consensus       208 ----~~~~~~~~~~~~~~-~~i~~~------~~~~~~~i~v~D~a~~~~~~l~~------~~~~~~~i~~~~~--~s~~e  268 (366)
                          +..++......+.. ..+++.      ++..++++|++|+|++++.++.+      ..+++||+++++.  +|+.|
T Consensus       291 ~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~e  370 (478)
T 4dqv_A          291 MSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDE  370 (478)
T ss_dssp             TTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHH
T ss_pred             HHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHH
Confidence                23344444332211 111111      15678999999999999999875      2468999999987  99999


Q ss_pred             HHHHHHHhcCCCC
Q 044498          269 MAEIILSFENEKL  281 (366)
Q Consensus       269 l~~~i~~~~g~~~  281 (366)
                      +++.+.+. |.+.
T Consensus       371 l~~~l~~~-g~~~  382 (478)
T 4dqv_A          371 YVDWLIEA-GYPI  382 (478)
T ss_dssp             HHHHHHHT-TCSC
T ss_pred             HHHHHHHc-CCCc
Confidence            99999996 6654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=1.5e-30  Score=244.61  Aligned_cols=240  Identities=17%  Similarity=0.201  Sum_probs=191.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |+|||||||||||++|+++|+++|+ +         |++++|.                   .+.+++.++++++|+|||
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~---------v~~~d~~-------------------~d~~~l~~~~~~~d~Vih   52 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHH---------IFEVHRQ-------------------TKEEELESALLKADFIVH   52 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCE---------EEECCTT-------------------CCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCE---------EEEECCC-------------------CCHHHHHHHhccCCEEEE
Confidence            6899999999999999999999998 7         7766553                   678889999999999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+...     ..++...++.|+.++.++++++++.+++ .+|||+||..+|+                   .+.|+.+|
T Consensus        53 ~a~~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~v~~Ss~~~~~-------------------~~~Y~~sK  107 (369)
T 3st7_A           53 LAGVNR-----PEHDKEFSLGNVSYLDHVLDILTRNTKK-PAILLSSSIQATQ-------------------DNPYGESK  107 (369)
T ss_dssp             CCCSBC-----TTCSTTCSSSCCBHHHHHHHHHTTCSSC-CEEEEEEEGGGGS-------------------CSHHHHHH
T ss_pred             CCcCCC-----CCCHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEeCchhhcC-------------------CCCchHHH
Confidence            999654     2466778899999999999999998864 2799999998886                   34699999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCC-------------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHh
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEK-------------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK  249 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~-------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  249 (366)
                      +++|++++.++++.+++++++|+.             .+..++..+.. +.++.+ +++++.++++|++|+|+++..+++
T Consensus       108 ~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~  185 (369)
T 3st7_A          108 LQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIAR-NEEIQV-NDRNVELTLNYVDDIVAEIKRAIE  185 (369)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHT-TCCCCC-SCTTCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHc-CCCeEe-cCCCeEEEEEEHHHHHHHHHHHHh
Confidence            999999999999999999998632             34556666665 666665 577888999999999999999998


Q ss_pred             cC-C--CCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHHHHHcCCCCCCCHHHHHHHHHH
Q 044498          250 SD-F--REPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYF  323 (366)
Q Consensus       250 ~~-~--~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~  323 (366)
                      .+ .  +++||+++++.+|+.|+++.+.+..|.+.++...+.+.     ..........+||.|..+++.+++...+
T Consensus       186 ~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-----~~~~~l~~~~l~~~p~~~~~~~l~~~~D  257 (369)
T 3st7_A          186 GTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDN-----LFEKDLYSTYLSYLPSTDFSYPLLMNVD  257 (369)
T ss_dssp             TCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHHTCCCCTTS-----HHHHHHHHHHHHTSCTTCSCCCCCEEEE
T ss_pred             CCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccCCCCC-----HHHHHHHHHHhcccCCcceeechhhccC
Confidence            86 3  69999999999999999999999998764433322111     1111333445889998877666554433

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=1e-29  Score=236.65  Aligned_cols=254  Identities=17%  Similarity=0.095  Sum_probs=195.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CC-CCCCCCCccEEEEEeCCCcccccc----ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RH-YSTSIPNALYIIASDWNKNEHMME----DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~-~~~~~~~~~~V~~~~r~~~~~~~~----~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|+||||||||+||++++++|+++ |+ +         |++++|........    ...++.++.+|++|.+.+.++++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~---------V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~   90 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKK---------IIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE   90 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSE---------EEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCE---------EEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh
Confidence            5689999999999999999999999 97 8         99999975432111    12357899999999999999999


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ  175 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~  175 (366)
                      ++|+|||+||.... .....++...+++|+.++.++++++.+.+++  +||++||...+                  .|.
T Consensus        91 ~~D~Vih~Aa~~~~-~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~--~~V~~SS~~~~------------------~p~  149 (344)
T 2gn4_A           91 GVDICIHAAALKHV-PIAEYNPLECIKTNIMGASNVINACLKNAIS--QVIALSTDKAA------------------NPI  149 (344)
T ss_dssp             TCSEEEECCCCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEECCGGGS------------------SCC
T ss_pred             cCCEEEECCCCCCC-CchhcCHHHHHHHHHHHHHHHHHHHHhCCCC--EEEEecCCccC------------------CCc
Confidence            99999999997642 2234566788999999999999999999999  99999996432                  346


Q ss_pred             CchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCc--------HHHHHHHHHhCCC-CeEEecCCcceeeeeeHHHHHHH
Q 044498          176 DAYGLEKLATEGLCKHYTKD---FEIECRLVGEKA--------PAAFSRKAVTSTD-NFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~--------~~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      +.|+.+|+++|.++..++.+   .+++++++|+..        +..++..+.. +. ++.+. ++...++|+|++|+|++
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~-g~~~~~i~-~~~~~r~~i~v~D~a~~  227 (344)
T 2gn4_A          150 NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQN-KASEIPIT-DIRMTRFWITLDEGVSF  227 (344)
T ss_dssp             SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHH-TCCCEEES-CTTCEEEEECHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHc-CCCceEEe-CCCeEEeeEEHHHHHHH
Confidence            78999999999999988764   479999998653        3445555555 55 67774 67788999999999999


Q ss_pred             HHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCC--CcccccChHHHHHHcCCCCCC
Q 044498          244 VLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG--VRGRNSDDTLINEELGWAPTM  312 (366)
Q Consensus       244 ~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~~k~~~~lG~~p~~  312 (366)
                      ++.+++.. .+++|++.++ .+++.|+++.+.+.++.+    ..+.+.+  ......+..+.++.++|...+
T Consensus       228 v~~~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~~~----~~~~~~~e~~~e~~~~~~~~~~~~~~~~~~  294 (344)
T 2gn4_A          228 VLKSLKRMHGGEIFVPKIP-SMKMTDLAKALAPNTPTK----IIGIRPGEKLHEVMIPKDESHLALEFEDFF  294 (344)
T ss_dssp             HHHHHHHCCSSCEEEECCC-EEEHHHHHHHHCTTCCEE----ECCCCTTCCSSCEEECGGGGGGEEECSSEE
T ss_pred             HHHHHhhccCCCEEecCCC-cEEHHHHHHHHHHhCCee----EcCCCCCccHhhhccCHhHHHhhccCCCEE
Confidence            99999876 4679998765 699999999998755322    2221111  122344555666666665443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=2.6e-28  Score=221.60  Aligned_cols=249  Identities=12%  Similarity=0.111  Sum_probs=184.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |+||||||||+||++++++|++. |++         |++++|++.........+++++.+|++|++.+.++++++|+|||
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~---------V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~   71 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDH---------FHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVF   71 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTT---------EEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCc---------EEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence            57999999999999999999988 899         99999987665544456789999999999999999999999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+....           ...|+.++.++++++++.+++  ||||+||.   +.....+             . .+...+
T Consensus        72 ~a~~~~~-----------~~~~~~~~~~l~~aa~~~gv~--~iv~~Ss~---~~~~~~~-------------~-~~~~~~  121 (289)
T 3e48_A           72 IPSIIHP-----------SFKRIPEVENLVYAAKQSGVA--HIIFIGYY---ADQHNNP-------------F-HMSPYF  121 (289)
T ss_dssp             CCCCCCS-----------HHHHHHHHHHHHHHHHHTTCC--EEEEEEES---CCSTTCC-------------S-TTHHHH
T ss_pred             eCCCCcc-----------chhhHHHHHHHHHHHHHcCCC--EEEEEccc---CCCCCCC-------------C-ccchhH
Confidence            9995421           134889999999999999999  99999993   3221111             1 112222


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCCcH----HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCC--CCcE
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEKAP----AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF--REPL  256 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~  256 (366)
                      ...|..+    ...+++++++|+..+    ..++.....++ . .+.+.+++.+++++++|+|+++..++..+.  +++|
T Consensus       122 ~~~e~~~----~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~-~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~  195 (289)
T 3e48_A          122 GYASRLL----STSGIDYTYVRMAMYMDPLKPYLPELMNMH-K-LIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRY  195 (289)
T ss_dssp             HHHHHHH----HHHCCEEEEEEECEESTTHHHHHHHHHHHT-E-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEE
T ss_pred             HHHHHHH----HHcCCCEEEEeccccccccHHHHHHHHHCC-C-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceE
Confidence            2334333    345999999986533    33444444422 2 334667888999999999999999998763  7899


Q ss_pred             EecCCCcccHHHHHHHHHHhcCCCCCCCcCCC---------CCCCc-------------ccccChHHHHHHcCCCCCCCH
Q 044498          257 NIGSDEMVSINEMAEIILSFENEKLPIHPIPG---------PEGVR-------------GRNSDDTLINEELGWAPTMKQ  314 (366)
Q Consensus       257 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---------~~~~~-------------~~~~~~~k~~~~lG~~p~~~~  314 (366)
                      |++ ++.+|+.|+++.+.+.+|++..+...+.         |.+..             ........+++.+|+.|+ ++
T Consensus       196 ~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~-~~  273 (289)
T 3e48_A          196 LLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ-TL  273 (289)
T ss_dssp             EEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC-CH
T ss_pred             EeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC-CH
Confidence            999 9999999999999999998866544432         11100             011244566777888777 76


Q ss_pred             HHHHH
Q 044498          315 KDELR  319 (366)
Q Consensus       315 ~e~l~  319 (366)
                      ++.++
T Consensus       274 ~~~~~  278 (289)
T 3e48_A          274 QSFLQ  278 (289)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66544

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=2.3e-29  Score=226.05  Aligned_cols=207  Identities=19%  Similarity=0.190  Sum_probs=172.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      +|++||||||||+||++++++|+++|++         |++++|......   ..+++++.+|++|.+++.++++++|+||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~---------V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   69 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEI---------LRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIV   69 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEE---------EEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCE---------EEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            4578999999999999999999999999         999999875443   3456899999999999999999999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+||...     ..+....+++|+.++.++++++++.+.+  ||||+||..+||...... ++.|+  .+..|.+.|+.+
T Consensus        70 ~~Ag~~~-----~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~iv~~SS~~~~g~~~~~~-~~~e~--~~~~~~~~Y~~s  139 (267)
T 3rft_A           70 HLGGISV-----EKPFEQILQGNIIGLYNLYEAARAHGQP--RIVFASSNHTIGYYPQTE-RLGPD--VPARPDGLYGVS  139 (267)
T ss_dssp             ECCSCCS-----CCCHHHHHHHHTHHHHHHHHHHHHTTCC--EEEEEEEGGGGTTSBTTS-CBCTT--SCCCCCSHHHHH
T ss_pred             ECCCCcC-----cCCHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEcchHHhCCCCCCC-CCCCC--CCCCCCChHHHH
Confidence            9999642     3456778999999999999999999998  999999999998654322 12443  477889999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCC--CCcEEec
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF--REPLNIG  259 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~i~  259 (366)
                      |+..|.+++.++.+++++++++|+..+.         +.    +.++...++|++++|+++++..+++.+.  ..++++.
T Consensus       140 K~~~e~~~~~~a~~~g~~~~~vr~~~v~---------~~----~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~  206 (267)
T 3rft_A          140 KCFGENLARMYFDKFGQETALVRIGSCT---------PE----PNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGA  206 (267)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECBCS---------SS----CCSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCeEEEEEeeccc---------CC----CCCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEe
Confidence            9999999999999999999999876542         11    2455667889999999999999998763  4578888


Q ss_pred             CCCc
Q 044498          260 SDEM  263 (366)
Q Consensus       260 ~~~~  263 (366)
                      ++++
T Consensus       207 s~~~  210 (267)
T 3rft_A          207 SAND  210 (267)
T ss_dssp             CCCT
T ss_pred             CCCC
Confidence            7653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=9.6e-29  Score=217.85  Aligned_cols=214  Identities=13%  Similarity=0.124  Sum_probs=170.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccc-eEEEccCCChhHHHhhhcCCCE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCH-EFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v-~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      .++|+||||||||+||++++++|+++|++         |++++|+..........++ +++.+|++  +.+.+++.++|+
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~---------V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~   87 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHE---------PVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDA   87 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCe---------EEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCE
Confidence            36789999999999999999999999999         9999998765444344478 99999999  678888899999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |||+||...     ..+....+++|+.++.++++++++.+++  |||++||...+.         .+..  + .+.+.|+
T Consensus        88 vi~~ag~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~--~iv~~SS~~~~~---------~~~~--~-~~~~~Y~  148 (236)
T 3e8x_A           88 VVFAAGSGP-----HTGADKTILIDLWGAIKTIQEAEKRGIK--RFIMVSSVGTVD---------PDQG--P-MNMRHYL  148 (236)
T ss_dssp             EEECCCCCT-----TSCHHHHHHTTTHHHHHHHHHHHHHTCC--EEEEECCTTCSC---------GGGS--C-GGGHHHH
T ss_pred             EEECCCCCC-----CCCccccchhhHHHHHHHHHHHHHcCCC--EEEEEecCCCCC---------CCCC--h-hhhhhHH
Confidence            999999653     3567788999999999999999999998  999999943322         1111  1 4577899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEE
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLN  257 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~  257 (366)
                      .+|.++|.+++    ..+++++++|+..+..-     .....+.........+++++++|+|+++..+++++  .+++|+
T Consensus       149 ~sK~~~e~~~~----~~gi~~~~lrpg~v~~~-----~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~  219 (236)
T 3e8x_A          149 VAKRLADDELK----RSSLDYTIVRPGPLSNE-----ESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFE  219 (236)
T ss_dssp             HHHHHHHHHHH----HSSSEEEEEEECSEECS-----CCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEE
T ss_pred             HHHHHHHHHHH----HCCCCEEEEeCCcccCC-----CCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEE
Confidence            99999999876    56999999987654211     11233444455566789999999999999999876  578999


Q ss_pred             ecCCCcccHHHHHHHHH
Q 044498          258 IGSDEMVSINEMAEIIL  274 (366)
Q Consensus       258 i~~~~~~s~~el~~~i~  274 (366)
                      ++++ .+++.|+++.|.
T Consensus       220 v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          220 VLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             EEEC-SEEHHHHHHTC-
T ss_pred             EeCC-CcCHHHHHHHhc
Confidence            9887 599999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=1.1e-28  Score=214.95  Aligned_cols=207  Identities=14%  Similarity=0.166  Sum_probs=167.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC-hhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV-MDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~-~~~l~~~~~~~d~vi~  102 (366)
                      |+||||||||+||++++++|+++|++         |++++|+.......  .+++++.+|++| .+++.++++++|+|||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~   69 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQ---------IYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIIN   69 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCE---------EEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence            58999999999999999999999999         99999987654332  467999999999 9999999999999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      +|+...         ...+++|+.++.++++++++.+++  +|||+||.++++...     ..|   .+..|.+.|+.+|
T Consensus        70 ~ag~~~---------~~~~~~n~~~~~~l~~a~~~~~~~--~iv~~SS~~~~~~~~-----~~e---~~~~~~~~Y~~sK  130 (219)
T 3dqp_A           70 VSGSGG---------KSLLKVDLYGAVKLMQAAEKAEVK--RFILLSTIFSLQPEK-----WIG---AGFDALKDYYIAK  130 (219)
T ss_dssp             CCCCTT---------SSCCCCCCHHHHHHHHHHHHTTCC--EEEEECCTTTTCGGG-----CCS---HHHHHTHHHHHHH
T ss_pred             CCcCCC---------CCcEeEeHHHHHHHHHHHHHhCCC--EEEEECcccccCCCc-----ccc---cccccccHHHHHH
Confidence            999642         237788999999999999999999  999999987765321     133   2456788999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEecC
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGS  260 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~  260 (366)
                      .++|.+++   ...+++++++|+..+..-     .....+.+   +...+++++++|+|++++.++.++  .+++||+++
T Consensus       131 ~~~e~~~~---~~~~i~~~ilrp~~v~g~-----~~~~~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~  199 (219)
T 3dqp_A          131 HFADLYLT---KETNLDYTIIQPGALTEE-----EATGLIDI---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHN  199 (219)
T ss_dssp             HHHHHHHH---HSCCCEEEEEEECSEECS-----CCCSEEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEE
T ss_pred             HHHHHHHH---hccCCcEEEEeCceEecC-----CCCCcccc---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCC
Confidence            99999886   456899999987654210     00112222   356788999999999999999875  478999987


Q ss_pred             CCcccHHHHHHH
Q 044498          261 DEMVSINEMAEI  272 (366)
Q Consensus       261 ~~~~s~~el~~~  272 (366)
                      +. .++.|+++.
T Consensus       200 g~-~~~~e~~~~  210 (219)
T 3dqp_A          200 GK-TAIKEALES  210 (219)
T ss_dssp             CS-EEHHHHHHT
T ss_pred             CC-ccHHHHHHH
Confidence            75 999998764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.95  E-value=1.5e-27  Score=217.71  Aligned_cols=228  Identities=11%  Similarity=-0.006  Sum_probs=176.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccc--ccccccceEEEccCCChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHM--MEDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~--~~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ++|+||||||||+||++++++|+++| ++         |++++|++....  .....+++++.+|++|++.+.++++++|
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~---------V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d   74 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLEDGTFK---------VRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAY   74 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCSSE---------EEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCce---------EEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCC
Confidence            45789999999999999999999998 99         999999865421  1123467999999999999999999999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCch
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAY  178 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y  178 (366)
                      +|||+++...      .   .....|+.++.++++++++.+++  ||||+||..+|+....             .+...|
T Consensus        75 ~vi~~a~~~~------~---~~~~~~~~~~~~~~~aa~~~gv~--~iv~~S~~~~~~~~~~-------------~~~~~y  130 (299)
T 2wm3_A           75 ATFIVTNYWE------S---CSQEQEVKQGKLLADLARRLGLH--YVVYSGLENIKKLTAG-------------RLAAAH  130 (299)
T ss_dssp             EEEECCCHHH------H---TCHHHHHHHHHHHHHHHHHHTCS--EEEECCCCCHHHHTTT-------------SCCCHH
T ss_pred             EEEEeCCCCc------c---ccchHHHHHHHHHHHHHHHcCCC--EEEEEcCccccccCCC-------------cccCch
Confidence            9999998431      0   12456788999999999999999  9999888877753211             234679


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH-HHHHHH----HhCCCCeEE-ecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          179 GLEKLATEGLCKHYTKDFEIECRLVGEKAPA-AFSRKA----VTSTDNFEM-WGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       179 ~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~-~~~~~~----~~~~~~~~i-~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                      +.+|..+|.+++.    .+++++++|+..+. .+...+    ...+....+ .+.++..+++++++|+|+++..++..+ 
T Consensus       131 ~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  206 (299)
T 2wm3_A          131 FDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE  206 (299)
T ss_dssp             HHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH
T ss_pred             hhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh
Confidence            9999999998865    48999999876542 222211    112222222 234667889999999999999999764 


Q ss_pred             --CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          252 --FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       252 --~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                        .+++|++++ +.+|+.|+++.+.+.+|++..+...|
T Consensus       207 ~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~  243 (299)
T 2wm3_A          207 KYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMT  243 (299)
T ss_dssp             HHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCC
T ss_pred             hhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecC
Confidence              578999986 68999999999999999876544443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.95  E-value=1.3e-27  Score=208.17  Aligned_cols=214  Identities=15%  Similarity=0.070  Sum_probs=141.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      ||||||||||+||++++++|+++|++         |++++|++....... .+++++.+|++|.+.  +.+.++|+|||+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~   68 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHE---------VTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDA   68 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCE---------EEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEEC
Confidence            58999999999999999999999999         999999876533322 567999999999987  678899999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      |+...          .....|+.++.++++++++.+++  |||++||...|........ ..|+  .+..|.+.|+.+|.
T Consensus        69 ag~~~----------~~~~~~~~~~~~l~~a~~~~~~~--~~v~~SS~~~~~~~~~~~~-~~~~--~~~~~~~~y~~~k~  133 (221)
T 3ew7_A           69 YGISP----------DEAEKHVTSLDHLISVLNGTVSP--RLLVVGGAASLQIDEDGNT-LLES--KGLREAPYYPTARA  133 (221)
T ss_dssp             CCSST----------TTTTSHHHHHHHHHHHHCSCCSS--EEEEECCCC----------------------CCCSCCHHH
T ss_pred             CcCCc----------cccchHHHHHHHHHHHHHhcCCc--eEEEEecceEEEcCCCCcc-cccc--CCCCCHHHHHHHHH
Confidence            99532          12566999999999999999888  9999999866544332210 1333  35667888999999


Q ss_pred             HHHHHHHHHHH-HcCCcEEEeCCCcHH---HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEE
Q 044498          184 ATEGLCKHYTK-DFEIECRLVGEKAPA---AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLN  257 (366)
Q Consensus       184 ~~E~~l~~~~~-~~~~~~~i~r~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~  257 (366)
                      ..|.+ ..+.. ..+++++++|+..+.   ............+.+.+++   .++++++|+|++++.+++++  .++.||
T Consensus       134 ~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~  209 (221)
T 3ew7_A          134 QAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFT  209 (221)
T ss_dssp             HHHHH-HHHHTTTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSCSCTTSEEE
T ss_pred             HHHHH-HHHHhhccCccEEEEeCcceecCCCccCceEeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEE
Confidence            99986 33443 679999999876542   1222122212333343333   36899999999999999886  589999


Q ss_pred             ecCCCcccHHH
Q 044498          258 IGSDEMVSINE  268 (366)
Q Consensus       258 i~~~~~~s~~e  268 (366)
                      ++++...+..|
T Consensus       210 ~~~~~~~~~~~  220 (221)
T 3ew7_A          210 VAGKLEHHHHH  220 (221)
T ss_dssp             CCC--------
T ss_pred             ECCCCcccccc
Confidence            99988776554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=1.6e-26  Score=212.08  Aligned_cols=227  Identities=15%  Similarity=0.132  Sum_probs=173.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----c----ccccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----M----MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~----~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +||+||||||||+||++++++|+++|++         |++++|+....    .    .....+++++.+|++|++++.++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~   73 (313)
T 1qyd_A            3 KKSRVLIVGGTGYIGKRIVNASISLGHP---------TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA   73 (313)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCC---------EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhCCCc---------EEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHH
Confidence            4678999999999999999999999999         99999985421    0    01234679999999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                      ++++|+|||+++....            ..|+.++.+++++|++.+ ++  |||+ |   +||......     +  .+.
T Consensus        74 ~~~~d~vi~~a~~~~~------------~~~~~~~~~l~~aa~~~g~v~--~~v~-S---~~g~~~~~~-----~--~~~  128 (313)
T 1qyd_A           74 LKQVDVVISALAGGVL------------SHHILEQLKLVEAIKEAGNIK--RFLP-S---EFGMDPDIM-----E--HAL  128 (313)
T ss_dssp             HTTCSEEEECCCCSSS------------STTTTTHHHHHHHHHHSCCCS--EEEC-S---CCSSCTTSC-----C--CCC
T ss_pred             HhCCCEEEECCccccc------------hhhHHHHHHHHHHHHhcCCCc--eEEe-c---CCcCCcccc-----c--cCC
Confidence            9999999999995431            136788999999999998 99  9985 3   466432210     1  133


Q ss_pred             CC-CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHH-HHHHHh-------CCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          173 EP-QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAF-SRKAVT-------STDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       173 ~p-~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~-~~~~~~-------~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      .| ...| .+|..+|++++.    .+++++++|+..+... ...+..       .+..+.++++++..+++++++|+|++
T Consensus       129 ~p~~~~y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~  203 (313)
T 1qyd_A          129 QPGSITF-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY  203 (313)
T ss_dssp             SSTTHHH-HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHH
T ss_pred             CCCcchH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHH
Confidence            34 4567 999999988753    5899999998765432 221111       12344556778888999999999999


Q ss_pred             HHHHHhcC--CCCcEEecCC-CcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          244 VLRLIKSD--FREPLNIGSD-EMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       244 ~~~~l~~~--~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      +..++.++  .++.|++.++ +.+|+.|+++.+.+.+|++..+...|
T Consensus       204 ~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  250 (313)
T 1qyd_A          204 TIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS  250 (313)
T ss_dssp             HHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred             HHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECC
Confidence            99999875  3678888764 78999999999999999886655544

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=5.5e-27  Score=208.22  Aligned_cols=228  Identities=10%  Similarity=0.015  Sum_probs=166.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      +||+||||||||+||++++++|+++  |++         |++++|+....... ..++.++.+|++|.+++.++++++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~---------V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFV---------AKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCE---------EEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcE---------EEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence            5689999999999999999999999  899         99999975432211 33578999999999999999999999


Q ss_pred             EEEcccccCCcc-----ccc-------cCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498          100 MSNLAADMGGMG-----FIQ-------SNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus       100 vi~~a~~~~~~~-----~~~-------~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      |||+|+......     .+.       ......+++|+.++.++++++++.+++  +|||+||.+++....  +.     
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~iv~~SS~~~~~~~~--~~-----  143 (253)
T 1xq6_A           73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK--HIVVVGSMGGTNPDH--PL-----  143 (253)
T ss_dssp             EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS--EEEEEEETTTTCTTC--GG-----
T ss_pred             EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCC--EEEEEcCccCCCCCC--cc-----
Confidence            999999653210     001       111245789999999999999999998  999999987653211  10     


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHH---HHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR---KAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                         .....+.|+.+|+.+|.+++.    .+++++++|+..+..-..   .... +....+++   ...++++++|+|+++
T Consensus       144 ---~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~Dva~~~  212 (253)
T 1xq6_A          144 ---NKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELLV-GKDDELLQ---TDTKTVPRADVAEVC  212 (253)
T ss_dssp             ---GGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSCEEE-ESTTGGGG---SSCCEEEHHHHHHHH
T ss_pred             ---ccccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhhhhc-cCCcCCcC---CCCcEEcHHHHHHHH
Confidence               001124588899999988754    589999998654311000   0000 00001111   124689999999999


Q ss_pred             HHHHhcC--CCCcEEecCCC---cccHHHHHHHHHHhcCC
Q 044498          245 LRLIKSD--FREPLNIGSDE---MVSINEMAEIILSFENE  279 (366)
Q Consensus       245 ~~~l~~~--~~~~~~i~~~~---~~s~~el~~~i~~~~g~  279 (366)
                      +.+++++  .+++||+++++   .+|+.|+++.+.+.+|+
T Consensus       213 ~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          213 IQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             HHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             HHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            9999875  47799999864   69999999999999886

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.94  E-value=7.3e-27  Score=203.90  Aligned_cols=216  Identities=11%  Similarity=0.039  Sum_probs=156.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      ||||||||||+||++++++|+++|++         |++++|+..........+++++.+|++|.+.  +.+.++|+|||+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~   69 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHE---------VLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDA   69 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCE---------EEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEEC
Confidence            58999999999999999999999999         9999998665443333568999999999987  778899999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC-CCCCCCCCcccccCCCCCCCCchHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP-EFKQLDTDVKESEAWPAEPQDAYGLEK  182 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg-~~~~~~~~~~e~~~~~~~p~~~Y~~sK  182 (366)
                      |+...        .......|+.++.++++++++.+ +  |||++||.+.+. .....+.  .++++....|.+.|+.+|
T Consensus        70 ag~~~--------~~~~~~~n~~~~~~l~~a~~~~~-~--~~v~~SS~~~~~~~~~~~~~--~~~~~~~~~~~~~y~~sK  136 (224)
T 3h2s_A           70 LSVPW--------GSGRGYLHLDFATHLVSLLRNSD-T--LAVFILGSASLAMPGADHPM--ILDFPESAASQPWYDGAL  136 (224)
T ss_dssp             CCCCT--------TSSCTHHHHHHHHHHHHTCTTCC-C--EEEEECCGGGSBCTTCSSCG--GGGCCGGGGGSTTHHHHH
T ss_pred             CccCC--------CcchhhHHHHHHHHHHHHHHHcC-C--cEEEEecceeeccCCCCccc--cccCCCCCccchhhHHHH
Confidence            99641        11235789999999999999999 7  999999975544 3332222  333333455688999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEeCCCcHHHHHH--HHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEe
Q 044498          183 LATEGLCKHYTKDFEIECRLVGEKAPAAFSR--KAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNI  258 (366)
Q Consensus       183 ~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i  258 (366)
                      ...|. +..+.+..+++++++|+..+..--.  ........+.   .+...+++++++|+|++++.+++++  .+++|++
T Consensus       137 ~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~---~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~  212 (224)
T 3h2s_A          137 YQYYE-YQFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLL---VGEDGQSHITTGNMALAILDQLEHPTAIRDRIVV  212 (224)
T ss_dssp             HHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCC---CCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEE
T ss_pred             HHHHH-HHHHHhcCCCcEEEEcCccccCCCcccCceecccccc---cCCCCCceEeHHHHHHHHHHHhcCccccCCEEEE
Confidence            99994 4555566799999998765421000  0000011111   1234468999999999999999886  5899999


Q ss_pred             cCCCcccHH
Q 044498          259 GSDEMVSIN  267 (366)
Q Consensus       259 ~~~~~~s~~  267 (366)
                      ++.+..+..
T Consensus       213 ~~~~~~~~~  221 (224)
T 3h2s_A          213 RDADLEHHH  221 (224)
T ss_dssp             EECC-----
T ss_pred             ecCcchhcc
Confidence            987765544

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.94  E-value=1.7e-26  Score=215.43  Aligned_cols=221  Identities=12%  Similarity=0.046  Sum_probs=171.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--ccc-ccccceEEEcc-CCChhHHHhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MME-DMFCHEFHLVD-LRVMDNCLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~~-~~~~v~~~~~D-~~~~~~l~~~~~~~   97 (366)
                      .+|+|||||||||||++++++|+++|++         |++++|+....  ... ...+++++.+| ++|++++.++++++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~   74 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHH---------VRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA   74 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC---------EEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE---------EEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcC
Confidence            3578999999999999999999999999         99999876543  111 11257899999 99999999999999


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEeccc--ccCCCCCCCCCcccccCCCCCC
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSAC--IYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~--vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                      |+|||+++...            ...|..+ .++++++++.+ ++  ||||+||..  .|+.                .+
T Consensus        75 d~Vi~~a~~~~------------~~~~~~~-~~l~~aa~~~g~v~--~~V~~SS~~~~~~~~----------------~~  123 (352)
T 1xgk_A           75 HLAFINTTSQA------------GDEIAIG-KDLADAAKRAGTIQ--HYIYSSMPDHSLYGP----------------WP  123 (352)
T ss_dssp             SEEEECCCSTT------------SCHHHHH-HHHHHHHHHHSCCS--EEEEEECCCGGGTSS----------------CC
T ss_pred             CEEEEcCCCCC------------cHHHHHH-HHHHHHHHHcCCcc--EEEEeCCccccccCC----------------CC
Confidence            99999987321            1346666 99999999999 99  999999975  3321                22


Q ss_pred             CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHH----H---H-hCCCCe--EEecCCcceeeeeeH-HHHHHH
Q 044498          175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRK----A---V-TSTDNF--EMWGDGKQTRSLTFI-DECVEG  243 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~----~---~-~~~~~~--~i~~~~~~~~~~i~v-~D~a~~  243 (366)
                      .+.|+.+|+.+|++++..    +++++++|+..+..-...    +   . .....+  .+++++++.++++|+ +|+|++
T Consensus       124 ~~~y~~sK~~~E~~~~~~----gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~a  199 (352)
T 1xgk_A          124 AVPMWAPKFTVENYVRQL----GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPA  199 (352)
T ss_dssp             CCTTTHHHHHHHHHHHTS----SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHc----CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHH
Confidence            357999999999988763    899999986543221110    0   0 012222  345667788999999 899999


Q ss_pred             HHHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          244 VLRLIKSD----FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       244 ~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      +..+++++    .+++||+++ +.+|+.|+++.+.+.+|.+..+...|
T Consensus       200 i~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp  246 (352)
T 1xgk_A          200 LLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP  246 (352)
T ss_dssp             HHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred             HHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECC
Confidence            99999875    589999995 67999999999999999986655555

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=2e-26  Score=210.87  Aligned_cols=222  Identities=14%  Similarity=0.160  Sum_probs=170.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--c-------ccccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--M-------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~-------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +||+|+||||||+||++++++|+++|++         |++++|+....  .       .....+++++.+|++|++.+.+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---------V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~   73 (308)
T 1qyc_A            3 SRSRILLIGATGYIGRHVAKASLDLGHP---------TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVE   73 (308)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCC---------EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhCCCC---------EEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHH
Confidence            4678999999999999999999999999         99999975422  0       1123468999999999999999


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      +++++|+|||+++...                +.++.+++++|++.+ ++  |||+ |+   ||...      .+.  .+
T Consensus        74 ~~~~~d~vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~--~~v~-S~---~g~~~------~~~--~~  123 (308)
T 1qyc_A           74 AVKNVDVVISTVGSLQ----------------IESQVNIIKAIKEVGTVK--RFFP-SE---FGNDV------DNV--HA  123 (308)
T ss_dssp             HHHTCSEEEECCCGGG----------------SGGGHHHHHHHHHHCCCS--EEEC-SC---CSSCT------TSC--CC
T ss_pred             HHcCCCEEEECCcchh----------------hhhHHHHHHHHHhcCCCc--eEee-cc---cccCc------ccc--cc
Confidence            9999999999999431                456789999999998 99  9984 43   55322      111  13


Q ss_pred             CCC-CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHH-HHHh------CCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          172 AEP-QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-KAVT------STDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       172 ~~p-~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~-~~~~------~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      ..| .+.| .+|...|.+++.    .+++++++|++.+..... .+..      ....+.++++++..+++++++|+|++
T Consensus       124 ~~p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (308)
T 1qyc_A          124 VEPAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTF  198 (308)
T ss_dssp             CTTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHH
T ss_pred             CCcchhHH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHH
Confidence            344 3568 999999988764    489999999876544322 1111      13356677888889999999999999


Q ss_pred             HHHHHhcC--CCCcEEecC-CCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          244 VLRLIKSD--FREPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       244 ~~~~l~~~--~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      +..++.++  .+++|++.+ ++.+|+.|+++.+.+.+|++..+...|
T Consensus       199 ~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  245 (308)
T 1qyc_A          199 TIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP  245 (308)
T ss_dssp             HHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred             HHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCC
Confidence            99999765  467888875 478999999999999999886654443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.94  E-value=3.8e-26  Score=210.18  Aligned_cols=221  Identities=13%  Similarity=0.120  Sum_probs=171.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhcCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      |++||||||||+||++++++|+++|++         |++++|+......    ....+++++.+|++|++++.++++++|
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~---------V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d   81 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHP---------TYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVD   81 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCC---------EEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCc---------EEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCC
Confidence            458999999999999999999999999         9999998752211    123468999999999999999999999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCCCCC-CC
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QD  176 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p-~~  176 (366)
                      +|||+++...                +.++.++++++++.+ ++  |||+ |   +||...      .+.  .+..| ..
T Consensus        82 ~vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~--~~v~-S---~~g~~~------~~~--~~~~p~~~  131 (318)
T 2r6j_A           82 VVISALAFPQ----------------ILDQFKILEAIKVAGNIK--RFLP-S---DFGVEE------DRI--NALPPFEA  131 (318)
T ss_dssp             EEEECCCGGG----------------STTHHHHHHHHHHHCCCC--EEEC-S---CCSSCT------TTC--CCCHHHHH
T ss_pred             EEEECCchhh----------------hHHHHHHHHHHHhcCCCC--EEEe-e---ccccCc------ccc--cCCCCcch
Confidence            9999999431                456789999999998 99  9985 3   355321      111  12233 34


Q ss_pred             chHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH-HHHHHHHh---CCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-
Q 044498          177 AYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA-AFSRKAVT---STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-  251 (366)
Q Consensus       177 ~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~-~~~~~~~~---~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-  251 (366)
                      .| .+|..+|.+++.    .+++++++|++.+. .++..+..   ....+.++++++..+++++++|+|+++..++..+ 
T Consensus       132 ~y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  206 (318)
T 2r6j_A          132 LI-ERKRMIRRAIEE----ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR  206 (318)
T ss_dssp             HH-HHHHHHHHHHHH----TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG
T ss_pred             hH-HHHHHHHHHHHh----cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc
Confidence            67 999999988754    58999999987553 33433332   2445667788888999999999999999999775 


Q ss_pred             -CCCcEEecC-CCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          252 -FREPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       252 -~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                       .+++|++.+ ++.+|+.|+++.+.+.+|++..+...|
T Consensus       207 ~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  244 (318)
T 2r6j_A          207 ALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP  244 (318)
T ss_dssp             GTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEEC
T ss_pred             ccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecC
Confidence             367788865 478999999999999999886655444

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=7.2e-26  Score=208.54  Aligned_cols=222  Identities=12%  Similarity=0.108  Sum_probs=171.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC-cc----ccc----cccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK-NE----HMM----EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~-~~----~~~----~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +||+|+||||||+||++++++|+++|++         |++++|+. ..    ...    ....+++++.+|++|++++.+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~   73 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHP---------TFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVS   73 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCC---------EEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHH
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCc---------EEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHH
Confidence            4678999999999999999999999999         99999986 21    110    123467999999999999999


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      +++++|+|||+++...                +.++.++++++++.+ ++  |||+ |   +||...      .+.  .+
T Consensus        74 a~~~~d~vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~--~~v~-S---~~g~~~------~~~--~~  123 (321)
T 3c1o_A           74 VLKQVDIVISALPFPM----------------ISSQIHIINAIKAAGNIK--RFLP-S---DFGCEE------DRI--KP  123 (321)
T ss_dssp             HHTTCSEEEECCCGGG----------------SGGGHHHHHHHHHHCCCC--EEEC-S---CCSSCG------GGC--CC
T ss_pred             HHcCCCEEEECCCccc----------------hhhHHHHHHHHHHhCCcc--EEec-c---ccccCc------ccc--cc
Confidence            9999999999999431                566789999999998 99  9983 3   355321      111  12


Q ss_pred             CCC-CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH-HHHHHHHh------CCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          172 AEP-QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA-AFSRKAVT------STDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       172 ~~p-~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~-~~~~~~~~------~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      ..| .+.| .+|..+|.+++.    .+++++++|++.+. .+...+..      .+..+.++++++..+++++++|+|++
T Consensus       124 ~~p~~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (321)
T 3c1o_A          124 LPPFESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKY  198 (321)
T ss_dssp             CHHHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHH
T ss_pred             CCCcchHH-HHHHHHHHHHHH----cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHH
Confidence            333 4578 999999988864    48999999987553 33333322      23456777888889999999999999


Q ss_pred             HHHHHhcC--CCCcEEecC-CCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          244 VLRLIKSD--FREPLNIGS-DEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       244 ~~~~l~~~--~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      +..++.++  .+++|++.+ ++.+|+.|+++.+.+.+|++..+...|
T Consensus       199 ~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  245 (321)
T 3c1o_A          199 TIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMP  245 (321)
T ss_dssp             HHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred             HHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCC
Confidence            99999875  467788876 579999999999999999886655544

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=1.4e-25  Score=193.02  Aligned_cols=200  Identities=10%  Similarity=-0.007  Sum_probs=155.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|+||||||+||++++++|+++|++         |++++|++.........+++++.+|++|.+.+.++++++|+|||+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYE---------VTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCe---------EEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            78999999999999999999999999         999999866543322446799999999999999999999999999


Q ss_pred             ccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHH
Q 044498          104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL  183 (366)
Q Consensus       104 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~  183 (366)
                      |+....     .   ...+.|+.++.++++++++.+++  +||++||..+|+.....+           .+.+.|+.+|.
T Consensus        75 a~~~~~-----~---~~~~~n~~~~~~~~~~~~~~~~~--~~v~~Ss~~~~~~~~~~~-----------~~~~~y~~~K~  133 (206)
T 1hdo_A           75 LGTRND-----L---SPTTVMSEGARNIVAAMKAHGVD--KVVACTSAFLLWDPTKVP-----------PRLQAVTDDHI  133 (206)
T ss_dssp             CCCTTC-----C---SCCCHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSCTTCSC-----------GGGHHHHHHHH
T ss_pred             ccCCCC-----C---CccchHHHHHHHHHHHHHHhCCC--eEEEEeeeeeccCccccc-----------ccchhHHHHHH
Confidence            996531     1   12358999999999999999999  999999999987654321           15678999999


Q ss_pred             HHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEecCC
Q 044498          184 ATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGSD  261 (366)
Q Consensus       184 ~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~  261 (366)
                      ..|.+++    ..+++++++|+..+..   .... +........ ....++++++|+|+++..+++++  .+++|+++++
T Consensus       134 ~~e~~~~----~~~i~~~~lrp~~~~~---~~~~-~~~~~~~~~-~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          134 RMHKVLR----ESGLKYVAVMPPHIGD---QPLT-GAYTVTLDG-RGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ  204 (206)
T ss_dssp             HHHHHHH----HTCSEEEEECCSEEEC---CCCC-SCCEEESSS-CSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred             HHHHHHH----hCCCCEEEEeCCcccC---CCCC-cceEecccC-CCCCCccCHHHHHHHHHHHhcCccccccceeeecc
Confidence            9999874    3589999999876410   0001 111111111 11158999999999999999875  4789999887


Q ss_pred             C
Q 044498          262 E  262 (366)
Q Consensus       262 ~  262 (366)
                      +
T Consensus       205 ~  205 (206)
T 1hdo_A          205 Y  205 (206)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.94  E-value=2.5e-27  Score=205.50  Aligned_cols=200  Identities=12%  Similarity=-0.005  Sum_probs=157.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++|+||||||||+||++++++|+++|+  +         |++++|+...    ...+++++.+|+++.+.+.+++  +|+
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~---------V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~   68 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAK---------VIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDT   68 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCE---------EECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCe---------EEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcE
Confidence            457999999999999999999999998  8         9999988765    1235688899999998888877  999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |||+|+...   ....+....+++|+.++.++++++++.+++  +|||+||..+|+.                 |.+.|+
T Consensus        69 vi~~a~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~~~~-----------------~~~~y~  126 (215)
T 2a35_A           69 AFCCLGTTI---KEAGSEEAFRAVDFDLPLAVGKRALEMGAR--HYLVVSALGADAK-----------------SSIFYN  126 (215)
T ss_dssp             EEECCCCCH---HHHSSHHHHHHHHTHHHHHHHHHHHHTTCC--EEEEECCTTCCTT-----------------CSSHHH
T ss_pred             EEECeeecc---ccCCCHHHHHHhhHHHHHHHHHHHHHcCCC--EEEEECCcccCCC-----------------CccHHH
Confidence            999999643   223566778899999999999999999998  9999999888752                 245799


Q ss_pred             HHHHHHHHHHHHHHHHcCCc-EEEeCCCcHH------HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCC
Q 044498          180 LEKLATEGLCKHYTKDFEIE-CRLVGEKAPA------AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF  252 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~-~~i~r~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  252 (366)
                      .+|.+.|.+++.    .+++ ++++|+..+.      .++..+.  .....+ .+  ..++++|++|+|+++..+++++.
T Consensus       127 ~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~~~~~~~--~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          127 RVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAEILA--APIARI-LP--GKYHGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             HHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGGGTT--CCCC-------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcchHHHHHH--Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC
Confidence            999999998765    3899 9999865431      1222111  111122 22  25689999999999999999888


Q ss_pred             CCcEEecCCCcccHH
Q 044498          253 REPLNIGSDEMVSIN  267 (366)
Q Consensus       253 ~~~~~i~~~~~~s~~  267 (366)
                      +++||+++++.+++.
T Consensus       198 ~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          198 KGVRFVESDELRKLG  212 (215)
T ss_dssp             SEEEEEEHHHHHHHH
T ss_pred             CCceEEcHHHHHHhh
Confidence            899999987766554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.93  E-value=9.7e-26  Score=206.25  Aligned_cols=221  Identities=14%  Similarity=0.109  Sum_probs=167.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC-c------ccc---ccccccceEEEccCCChhHHHh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK-N------EHM---MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~-~------~~~---~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ||+||||||||+||++++++|+++|++         |++++|+. .      +..   .....+++++.+|++|++++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---------V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~   72 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNP---------TYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVK   72 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCC---------EEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCc---------EEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHH
Confidence            678999999999999999999999999         99999986 1      110   0112467999999999999999


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcccccCCC
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVKESEAWP  171 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~  171 (366)
                      +++++|+|||+++...                +.++.++++++++.+ ++  |||+ |   +||...      .+.  .+
T Consensus        73 ~~~~~d~vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~--~~v~-S---~~g~~~------~~~--~~  122 (307)
T 2gas_A           73 AIKQVDIVICAAGRLL----------------IEDQVKIIKAIKEAGNVK--KFFP-S---EFGLDV------DRH--DA  122 (307)
T ss_dssp             HHTTCSEEEECSSSSC----------------GGGHHHHHHHHHHHCCCS--EEEC-S---CCSSCT------TSC--CC
T ss_pred             HHhCCCEEEECCcccc----------------cccHHHHHHHHHhcCCce--EEee-c---ccccCc------ccc--cC
Confidence            9999999999999531                456789999999998 99  9984 3   355322      111  13


Q ss_pred             CCC-CCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHH-HHHHHH------hCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          172 AEP-QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAA-FSRKAV------TSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       172 ~~p-~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~-~~~~~~------~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      ..| .+.| .+|...|.+++.    .+++++++|++.+.. +...+.      .....+.++++++..+++++++|+|++
T Consensus       123 ~~p~~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          123 VEPVRQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             CTTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             CCcchhHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence            344 4578 999999987764    489999998764422 111111      123355667788888999999999999


Q ss_pred             HHHHHhcC--CCCcEEecCC-CcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          244 VLRLIKSD--FREPLNIGSD-EMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       244 ~~~~l~~~--~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      +..++..+  .++.|++.++ +.+|+.|+++.+.+.+|++..+...|
T Consensus       198 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~  244 (307)
T 2gas_A          198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS  244 (307)
T ss_dssp             HHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEEC
T ss_pred             HHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecC
Confidence            99999765  3677888754 68999999999999999876654443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=3.3e-24  Score=188.79  Aligned_cols=200  Identities=12%  Similarity=0.053  Sum_probs=138.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++||+||||||||+||++++++|+++| ++         |++++|+..........++.++.+|++|++++.++++++|+
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~---------V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~   91 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIK---------QTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDI   91 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEE---------EEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCce---------EEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCE
Confidence            357789999999999999999999999 89         99999987655444445679999999999999999999999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |||+++...               ....+.++++++++.+++  |||++||..+|+.......  ...+.....+.    
T Consensus        92 vv~~a~~~~---------------~~~~~~~~~~~~~~~~~~--~iV~iSS~~~~~~~~~~~~--~~~~~~~~~~~----  148 (236)
T 3qvo_A           92 VYANLTGED---------------LDIQANSVIAAMKACDVK--RLIFVLSLGIYDEVPGKFV--EWNNAVIGEPL----  148 (236)
T ss_dssp             EEEECCSTT---------------HHHHHHHHHHHHHHTTCC--EEEEECCCCC------------------CGGG----
T ss_pred             EEEcCCCCc---------------hhHHHHHHHHHHHHcCCC--EEEEEecceecCCCCcccc--cchhhcccchH----
Confidence            999998421               124567899999999998  9999999999987654322  11211122223    


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcce-eeeeeHHHHHHHHHHHHhcC---CCCc
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQT-RSLTFIDECVEGVLRLIKSD---FREP  255 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~i~v~D~a~~~~~~l~~~---~~~~  255 (366)
                      ..+..+|..+    ...+++++++|+..+..-      ..........+... ..+++++|+|++++.++..+   .++.
T Consensus       149 ~~~~~~~~~l----~~~gi~~~~vrPg~i~~~------~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~  218 (236)
T 3qvo_A          149 KPFRRAADAI----EASGLEYTILRPAWLTDE------DIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGEN  218 (236)
T ss_dssp             HHHHHHHHHH----HTSCSEEEEEEECEEECC------SCCCCEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEE
T ss_pred             HHHHHHHHHH----HHCCCCEEEEeCCcccCC------CCcceEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCee
Confidence            3344445544    345999999987754210      01112222222222 45899999999999999875   4788


Q ss_pred             EEecCCC
Q 044498          256 LNIGSDE  262 (366)
Q Consensus       256 ~~i~~~~  262 (366)
                      |+++++.
T Consensus       219 ~~i~~~~  225 (236)
T 3qvo_A          219 IGINQPG  225 (236)
T ss_dssp             EEEECSS
T ss_pred             EEecCCC
Confidence            9998875

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=1.1e-23  Score=185.92  Aligned_cols=197  Identities=11%  Similarity=0.031  Sum_probs=148.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++|+||||||||+||++++++|+++|+  +         |++++|+..........++.++.+|++|.+++.++++++|+
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~---------V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   87 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSK---------VTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDV   87 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSE---------EEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCE---------EEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCE
Confidence            457999999999999999999999999  9         99999987543332234578999999999999999999999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      |||+||...    ...+....+++|+.++.++++++++.+++  +||++||.++|+.                 +.+.|+
T Consensus        88 vi~~ag~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~iv~~SS~~~~~~-----------------~~~~Y~  144 (242)
T 2bka_A           88 GFCCLGTTR----GKAGAEGFVRVDRDYVLKSAELAKAGGCK--HFNLLSSKGADKS-----------------SNFLYL  144 (242)
T ss_dssp             EEECCCCCH----HHHHHHHHHHHHTHHHHHHHHHHHHTTCC--EEEEECCTTCCTT-----------------CSSHHH
T ss_pred             EEECCCccc----ccCCcccceeeeHHHHHHHHHHHHHCCCC--EEEEEccCcCCCC-----------------CcchHH
Confidence            999999642    12234667889999999999999999988  9999999888752                 235799


Q ss_pred             HHHHHHHHHHHHHHHHcCC-cEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHh
Q 044498          180 LEKLATEGLCKHYTKDFEI-ECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK  249 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~-~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  249 (366)
                      .+|...|.+++.+    ++ +++++|+..+         ...+........+. .++    ...+++++|+|++++.++.
T Consensus       145 ~sK~~~e~~~~~~----~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~dva~~~~~~~~  215 (242)
T 2bka_A          145 QVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD-SWA----SGHSVPVVTVVRAMLNNVV  215 (242)
T ss_dssp             HHHHHHHHHHHTT----CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT-TGG----GGTEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc----CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCc-ccc----CCcccCHHHHHHHHHHHHh
Confidence            9999999887654    77 5888876432         11111111111111 111    2348999999999999998


Q ss_pred             cCC-CCcEEec
Q 044498          250 SDF-REPLNIG  259 (366)
Q Consensus       250 ~~~-~~~~~i~  259 (366)
                      .+. .+.+.+.
T Consensus       216 ~~~~~~~~~~~  226 (242)
T 2bka_A          216 RPRDKQMELLE  226 (242)
T ss_dssp             SCCCSSEEEEE
T ss_pred             CccccCeeEee
Confidence            864 3555554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.91  E-value=1.4e-24  Score=192.93  Aligned_cols=221  Identities=13%  Similarity=0.013  Sum_probs=159.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc----CCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS----GVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~----~~d   98 (366)
                      |++||||||+|+||++++++|+++|++         |++++|+......       .+.+|+++.+++.++++    ++|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~---------V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d   64 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHT---------VIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLD   64 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCE---------EEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCcc
Confidence            468999999999999999999999999         9999997653221       26789999988888775    899


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCCCCcccc-----cC
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLDTDVKES-----EA  169 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~~~~~e~-----~~  169 (366)
                      +|||+||...    ...+....+++|+.++.++++++.+.    +.+  +||++||..+|+.....+. ..|.     +.
T Consensus        65 ~vi~~Ag~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~~~~~~-~~~~~~~~~~~  137 (255)
T 2dkn_A           65 GLVCCAGVGV----TAANSGLVVAVNYFGVSALLDGLAEALSRGQQP--AAVIVGSIAATQPGAAELP-MVEAMLAGDEA  137 (255)
T ss_dssp             EEEECCCCCT----TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSC--EEEEECCGGGGSTTGGGCH-HHHHHHHTCHH
T ss_pred             EEEECCCCCC----cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCc--eEEEEeccccccccccccc-hhhhhcccchh
Confidence            9999999653    13456778999999999999987764    556  9999999998875422110 0000     00


Q ss_pred             -------CCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCC---eEEecCCcceeeee
Q 044498          170 -------WPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDN---FEMWGDGKQTRSLT  235 (366)
Q Consensus       170 -------~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~---~~i~~~~~~~~~~i  235 (366)
                             ....+.+.|+.+|++.|.+++.++.+   .+++++++|+..+ ..+..........   ..... + ..++++
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~  215 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV-A-PLGRGS  215 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCC-C-TTSSCB
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHH-H-HhcCCC
Confidence                   01235678999999999999998876   5899999986644 3333333221110   00000 1 345789


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHH
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMVSINE  268 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~e  268 (366)
                      +++|+|++++.++..+    .++.|++.+|..+++.|
T Consensus       216 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          216 EPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999999999764    47899999988776654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.90  E-value=5.8e-23  Score=185.17  Aligned_cols=224  Identities=12%  Similarity=0.038  Sum_probs=165.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .++++||||||+|+||++++++|+++|++         |++++|........     ...++.++.+|++|.+++.++++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   84 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAK---------VVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVD   84 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            36689999999999999999999999999         99999875432111     11156899999999998888765


Q ss_pred             -------CCCEEEEcccccCCc--c---ccccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCC
Q 044498           96 -------GVDNMSNLAADMGGM--G---FIQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~--~---~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~  159 (366)
                             ++|+|||+||.....  .   ....+....+++|+.++.++++++...    +..  +||++||...|.... 
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~~~-  161 (278)
T 2bgk_A           85 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG--SIVFTASISSFTAGE-  161 (278)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE--EEEEECCGGGTCCCT-
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC--eEEEEeeccccCCCC-
Confidence                   799999999975321  0   111233456889999999999988763    555  999999987765321 


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH------------HHHHHHHHhCCCCeEE
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP------------AAFSRKAVTSTDNFEM  224 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~------------~~~~~~~~~~~~~~~i  224 (366)
                                   .+...|+.+|.+.+.+++.++.+   .++++.++++..+            ..+...+.. ..    
T Consensus       162 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~----  223 (278)
T 2bgk_A          162 -------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAH-QA----  223 (278)
T ss_dssp             -------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHH-HT----
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhh-cc----
Confidence                         13567999999999999998876   4888888864432            112222211 00    


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhc
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAEIILSFE  277 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~  277 (366)
                         +.....+++++|+|++++.++...    .++.|++.+|..+++.|+++.+.+.+
T Consensus       224 ---~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          224 ---ANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             ---CSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             ---cccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence               112245789999999999998542    47899999999999999999886654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.89  E-value=6.9e-24  Score=191.69  Aligned_cols=228  Identities=14%  Similarity=0.028  Sum_probs=161.7

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc--
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      .++++||||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++  
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   73 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDT---------VIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADV   73 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999         99999976543221   12356899999999998887765  


Q ss_pred             -----CCCEEEEcccccCCcc---ccccCcchhhhhhHHH----HHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTI----SFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~----~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|+|||+||......   ....+....+++|+.+    ++.++..+++.+..  +||++||...+.        
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~--------  143 (281)
T 3m1a_A           74 LARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG--SVVNISSFGGQL--------  143 (281)
T ss_dssp             HHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTC--------
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEEcCccccC--------
Confidence                 7999999999753211   1222334568899999    55556666667777  999999976542        


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-H---------------HHHHHHHhCCCCeEE
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-A---------------AFSRKAVTSTDNFEM  224 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~---------------~~~~~~~~~~~~~~i  224 (366)
                             +..+.+.|+.+|.+.|.+.+.++.+   +++++.+++++.+ .               .+...... ...+  
T Consensus       144 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~--  213 (281)
T 3m1a_A          144 -------SFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGP-TRQL--  213 (281)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHH-HHHH--
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHH-HHHH--
Confidence                   2335678999999999999999888   6888888865432 1               11111100 0000  


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFEN  278 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g  278 (366)
                       ........+.+++|+|++++.+++.+ .+..|+++++....+.+....+.+.++
T Consensus       214 -~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          214 -VQGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             -HHC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             -HhhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence             01112345788999999999999886 567899998877777777777766554

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.88  E-value=4.4e-23  Score=183.54  Aligned_cols=209  Identities=16%  Similarity=0.101  Sum_probs=155.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|++++.++++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   80 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGAS---------VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence            5689999999999999999999999999         9999987543211      012346788999999998888765


Q ss_pred             -------CCCEEEEcccccCCccc--cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF--IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                             ++|+|||+||.......  ...+....+++|+.++.++++++.    +.+.+  +||++||...+..      
T Consensus        81 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~------  152 (255)
T 1fmc_A           81 FAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG--VILTITSMAAENK------  152 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTCC------
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEcchhhcCC------
Confidence                   89999999997642211  122335568899999999888875    44566  8999999876542      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-H---------HHHHHHHhCCCCeEEecCCc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-A---------AFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~---------~~~~~~~~~~~~~~i~~~~~  229 (366)
                               ..+...|+.+|.+.|.+++.++.++   ++++.++++..+ .         .+...... +.         
T Consensus       153 ---------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~---------  213 (255)
T 1fmc_A          153 ---------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQ-HT---------  213 (255)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHH-TC---------
T ss_pred             ---------CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHh-cC---------
Confidence                     2345689999999999999988775   788888866533 1         12222222 11         


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      ....+.+++|+|+++..++...    .+++|++.+|..+|+
T Consensus       214 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          214 PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             CcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            2234789999999999998653    478999999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.88  E-value=2.4e-22  Score=177.64  Aligned_cols=216  Identities=18%  Similarity=0.148  Sum_probs=153.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhc---C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTS---G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~---~   96 (366)
                      ++|+||||||+|+||++++++|+++|++         |++++|+.......  ...+++++.+|+++.+++.++++   +
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAK---------VVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGP   76 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCC
Confidence            5679999999999999999999999999         99999875432111  11246788999999999998876   4


Q ss_pred             CCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCCCCccccc
Q 044498           97 VDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      +|+|||+||........   ..+....+++|+.++.++++++.+.    + ..  +||++||...|...           
T Consensus        77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~-----------  143 (244)
T 1cyd_A           77 VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG--SIVNVSSMVAHVTF-----------  143 (244)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCGGGTSCC-----------
T ss_pred             CCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe--EEEEEcchhhcCCC-----------
Confidence            89999999975422111   1233456889999999988887654    4 45  89999998776532           


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeeeeeHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~i~v~D~a~~  243 (366)
                          .+...|+.+|+..|.+++.++.+   .++++.++++..+ ..+...... .... .........+++++++|+|++
T Consensus       144 ----~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~  218 (244)
T 1cyd_A          144 ----PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA-DPEFARKLKERHPLRKFAEVEDVVNS  218 (244)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC-CHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc-CHHHHHHHHhcCCccCCCCHHHHHHH
Confidence                23457999999999999998887   4788888876543 222111100 0000 000011123578999999999


Q ss_pred             HHHHHhcC----CCCcEEecCCCcc
Q 044498          244 VLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       244 ~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ++.++..+    .++.+++.+|...
T Consensus       219 ~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          219 ILFLLSDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             HHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred             HHHHhCchhhcccCCEEEECCCccC
Confidence            99999653    4788898877543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=5.7e-22  Score=172.59  Aligned_cols=196  Identities=11%  Similarity=0.069  Sum_probs=144.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHH-HcCCCCCCCCCccEEEEEeCCCc-ccccc--ccccceEEEccCCChhHHHhhhcCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLK-SERHYSTSIPNALYIIASDWNKN-EHMME--DMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~-~~g~~~~~~~~~~~V~~~~r~~~-~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      |++||||||||+||++++++|+ ++|++         |++++|+.. .....  ...++.++.+|++|.+++.++++++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   75 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMH---------ITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAE   75 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCE---------EEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCce---------EEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCC
Confidence            3459999999999999999999 89999         999999866 43322  34567899999999999999999999


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCC-c
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQD-A  177 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~-~  177 (366)
                      +|||+||..                |+. +.++++++++.+++  |||++||..+|+......   .+..  . .... .
T Consensus        76 ~vv~~ag~~----------------n~~-~~~~~~~~~~~~~~--~iv~iSs~~~~~~~~~~~---~~~~--~-~~~~~~  130 (221)
T 3r6d_A           76 VVFVGAMES----------------GSD-MASIVKALSRXNIR--RVIGVSMAGLSGEFPVAL---EKWT--F-DNLPIS  130 (221)
T ss_dssp             EEEESCCCC----------------HHH-HHHHHHHHHHTTCC--EEEEEEETTTTSCSCHHH---HHHH--H-HTSCHH
T ss_pred             EEEEcCCCC----------------Chh-HHHHHHHHHhcCCC--eEEEEeeceecCCCCccc---cccc--c-cccccH
Confidence            999999932                455 89999999999998  999999998887543210   0100  0 1223 7


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcce-eeeeeHHHHHHHHHHHH--hcC---
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQT-RSLTFIDECVEGVLRLI--KSD---  251 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~i~v~D~a~~~~~~l--~~~---  251 (366)
                      |+.+|...|.+++.    .+++++++|+..+..-   . . ............. ..+++.+|+|++++.++  ..+   
T Consensus       131 y~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~---~-~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~  201 (221)
T 3r6d_A          131 YVQGERQARNVLRE----SNLNYTILRLTWLYND---P-E-XTDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPF  201 (221)
T ss_dssp             HHHHHHHHHHHHHH----SCSEEEEEEECEEECC---T-T-CCCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGG
T ss_pred             HHHHHHHHHHHHHh----CCCCEEEEechhhcCC---C-C-CcceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhh
Confidence            99999999988754    5999999987765210   0 0 1222222222222 34899999999999999  664   


Q ss_pred             CCCcEEecCC
Q 044498          252 FREPLNIGSD  261 (366)
Q Consensus       252 ~~~~~~i~~~  261 (366)
                      .++.+.+.++
T Consensus       202 ~~~~~~i~~~  211 (221)
T 3r6d_A          202 HRTSIGVGEP  211 (221)
T ss_dssp             TTEEEEEECT
T ss_pred             hcceeeecCC
Confidence            3566777654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.88  E-value=3.2e-22  Score=171.65  Aligned_cols=187  Identities=12%  Similarity=0.081  Sum_probs=142.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcC---CCE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSG---VDN   99 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~---~d~   99 (366)
                      +|+||||||+|+||++++++|+ +|++         |++++|+..           .+.+|+++.+++.+++++   +|+
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~---------V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~   61 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAE---------VITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDA   61 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSE---------EEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCe---------EEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999 9999         999998753           578999999998887764   899


Q ss_pred             EEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498          100 MSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                      |||+||..........+   ....+++|+.++.++++++.+.   + .  +||++||...+..               ..
T Consensus        62 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~--~iv~~sS~~~~~~---------------~~  123 (202)
T 3d7l_A           62 IVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-G--SFTLTTGIMMEDP---------------IV  123 (202)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-E--EEEEECCGGGTSC---------------CT
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-C--EEEEEcchhhcCC---------------CC
Confidence            99999965322222222   2345789999999999999876   4 4  8999999765432               23


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      +...|+.+|...|.+++.++.++  ++++.++++..+..-+....          +....+++++++|+|++++.++...
T Consensus       124 ~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~----------~~~~~~~~~~~~dva~~~~~~~~~~  193 (202)
T 3d7l_A          124 QGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKLE----------PFFEGFLPVPAAKVARAFEKSVFGA  193 (202)
T ss_dssp             TCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHHG----------GGSTTCCCBCHHHHHHHHHHHHHSC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhhh----------hhccccCCCCHHHHHHHHHHhhhcc
Confidence            45689999999999999988764  89999998765532222211          1122356899999999999888654


Q ss_pred             -CCCcEEe
Q 044498          252 -FREPLNI  258 (366)
Q Consensus       252 -~~~~~~i  258 (366)
                       .+++|++
T Consensus       194 ~~G~~~~v  201 (202)
T 3d7l_A          194 QTGESYQV  201 (202)
T ss_dssp             CCSCEEEE
T ss_pred             ccCceEec
Confidence             5678876

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.87  E-value=1.2e-21  Score=173.14  Aligned_cols=217  Identities=16%  Similarity=0.098  Sum_probs=153.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhc---C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTS---G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~---~   96 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......  ...+++++.+|+++.+++.++++   +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGAR---------VVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGP   76 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCC
Confidence            5578999999999999999999999999         99999875432111  11245788999999999998875   5


Q ss_pred             CCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCCCCccccc
Q 044498           97 VDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      +|+|||+||.........   .+....+++|+.++.++++++.+.    + ..  +||++||...+..            
T Consensus        77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~------------  142 (244)
T 3d3w_A           77 VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG--AIVNVSSQCSQRA------------  142 (244)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCGGGTSC------------
T ss_pred             CCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc--EEEEeCchhhccC------------
Confidence            899999999754221111   223556889999999888887653    4 45  8999999766542            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                         ..+...|+.+|++.|.+++.++.++   ++++.++++..+. .+......................+++++|+|+++
T Consensus       143 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (244)
T 3d3w_A          143 ---VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI  219 (244)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence               2235679999999999999988774   7888888765431 12111111000000001111234688999999999


Q ss_pred             HHHHhcC----CCCcEEecCCCcc
Q 044498          245 LRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       245 ~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      +.++...    .++.|++.+|...
T Consensus       220 ~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          220 LFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHcCccccCCCCCEEEECCCccC
Confidence            9999653    4789999887543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.87  E-value=1.1e-21  Score=175.11  Aligned_cols=208  Identities=13%  Similarity=0.121  Sum_probs=154.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......   ..+.++.+|+++++++.++++      
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYR---------VVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            5678999999999999999999999999         9999987654322   246899999999998887765      


Q ss_pred             -CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||.........   .+....+++|+.++.++++++    ++.+..  ++|++||...+...          
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~~~~~----------  162 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSG--HIVSITTSLVDQPM----------  162 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCTTTTSCB----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc--EEEEEechhhccCC----------
Confidence             7999999999764322222   233455889999999999887    455666  89999997654322          


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HH----HHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AF----SRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~----~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                         +..+...|+.+|.+.+.+.+.++.++   ++++..++++.+. .+    ......         .......+..++|
T Consensus       163 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---------~~~p~~r~~~~~d  230 (260)
T 3un1_A          163 ---VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLA---------GLHPVGRMGEIRD  230 (260)
T ss_dssp             ---TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHH---------TTSTTSSCBCHHH
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHh---------ccCCCCCCcCHHH
Confidence               23456789999999999999999987   7888888654331 11    011111         1122345778999


Q ss_pred             HHHHHHHHHhcC--CCCcEEecCCCccc
Q 044498          240 CVEGVLRLIKSD--FREPLNIGSDEMVS  265 (366)
Q Consensus       240 ~a~~~~~~l~~~--~~~~~~i~~~~~~s  265 (366)
                      +|++++.+.+..  .++++++.+|...+
T Consensus       231 va~av~~L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          231 VVDAVLYLEHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhcccCCCCCcEEEECCCeecc
Confidence            999999995544  68999999886543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.87  E-value=2.6e-22  Score=179.19  Aligned_cols=218  Identities=13%  Similarity=0.047  Sum_probs=155.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++++++.++++   
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGAT---------VAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999876432211   12345889999999998887765   


Q ss_pred             ----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                          ++|++||+||.........   .+....+++|+.++.++++++...    + ..  ++|++||...+..       
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~-------  148 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGG--KIINMASQAGRRG-------  148 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--EEEEECCGGGTSC-------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCe--EEEEECChhhccC-------
Confidence                7999999999764322222   233455789999999999887653    2 33  8999999765432       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----HH---HHHHHHhC--CCCeEEecCCcc
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----AA---FSRKAVTS--TDNFEMWGDGKQ  230 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----~~---~~~~~~~~--~~~~~i~~~~~~  230 (366)
                              ..+...|+.+|...+.+.+.++.++   ++++..++++.+     ..   +.......  ........+..+
T Consensus       149 --------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  220 (259)
T 4e6p_A          149 --------EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVP  220 (259)
T ss_dssp             --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHST
T ss_pred             --------CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCC
Confidence                    2235679999999999999998876   788888865433     11   11111110  111111222334


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      ...+.+++|+|+++..++...    .+++|++.+|..+|
T Consensus       221 ~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          221 FGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             TSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            567899999999999988542    48999999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.87  E-value=1.8e-21  Score=174.33  Aligned_cols=218  Identities=13%  Similarity=0.078  Sum_probs=143.0

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHh
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      |..++++||||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV---------IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREK   80 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence            3346689999999999999999999999999         9999987543211      012246889999999988877


Q ss_pred             hh--------cCCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCC
Q 044498           93 MT--------SGVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        93 ~~--------~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~  157 (366)
                      ++        .++|+|||+||.......   ...+....+++|+.++.++++++    ++.+.+  +||++||...+.. 
T Consensus        81 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~-  157 (266)
T 1xq1_A           81 LMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG--NIIFMSSIAGVVS-  157 (266)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC--EEEEEC--------
T ss_pred             HHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEccchhccC-
Confidence            66        468999999997532111   12233456889999999999888    455677  9999999765532 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                    ..+...|+.+|...+.+.+.++.++   ++++.++++..+ ..+...... ...............
T Consensus       158 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~  222 (266)
T 1xq1_A          158 --------------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGR  222 (266)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC-HHHHHHHHhcCCCCC
Confidence                          1235689999999999999988875   899999977654 222221110 000000011112235


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +.+++|+|+++..++...    .++.+++.+|..
T Consensus       223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          223 FGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             -CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            789999999999998642    478899988764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.87  E-value=2e-22  Score=183.91  Aligned_cols=231  Identities=11%  Similarity=-0.052  Sum_probs=164.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c-cccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D-MFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~-~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......      . ..++.++.+|+++.+++.+++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   95 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQ---------CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV   95 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHH
Confidence            5688999999999999999999999999         99999876432110      0 234689999999999887765


Q ss_pred             c-------CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHHc-----CCCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARMN-----GVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       ++|+|||+||......   ....+....+++|+.++.++++++.+.     +..  +||++||...+..   
T Consensus        96 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~--~iv~isS~~~~~~---  170 (302)
T 1w6u_A           96 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGA--AFLSITTIYAETG---  170 (302)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCE--EEEEECCTHHHHC---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC--EEEEEcccccccC---
Confidence            4       5799999999653211   112234556889999999998887542     345  8999999765432   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HH-HHHHHHhCCCCe-EEecCCcceee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AA-FSRKAVTSTDNF-EMWGDGKQTRS  233 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~-~~~~~~~~~~~~-~i~~~~~~~~~  233 (366)
                                  ..+...|+.+|++.+.+.+.++.+   +++++.+++++.+ .. +...... .... ...........
T Consensus       171 ------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~p~~~  237 (302)
T 1w6u_A          171 ------------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-TGTFEKEMIGRIPCGR  237 (302)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-TSHHHHHHHTTCTTSS
T ss_pred             ------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc-chhhHHHHHhcCCcCC
Confidence                        234567999999999999999887   6888988876544 11 2111100 0000 00001112234


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHHHHHHhcCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAEIILSFENE  279 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~  279 (366)
                      +.+++|+|++++.++...    .+++|++.+|..+++.++++.+.+..|.
T Consensus       238 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          238 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred             CCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence            788999999999998642    5789999999989999888888776654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.86  E-value=5.5e-22  Score=179.20  Aligned_cols=233  Identities=12%  Similarity=0.089  Sum_probs=164.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c---cccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D---MFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~---~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......      .   ...+.++.+|++|++++.+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGAS---------VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETAR   80 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHH
Confidence            5688999999999999999999999999         99999876432111      1   1146889999999998877


Q ss_pred             hhc-------CCCEEEEcccccCCcc-ccc---cCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMG-FIQ---SNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~  157 (366)
                      +++       ++|++||+||...... ...   .+....+++|+.++.++++++.+.    +..  +||++||...+.. 
T Consensus        81 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~-  157 (281)
T 3svt_A           81 AVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGG--SFVGISSIAASNT-  157 (281)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEEEECCHHHHSC-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEeCHHHcCC-
Confidence            664       6899999999733211 111   223456889999999999877653    333  8999999876532 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                    ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+......................
T Consensus       158 --------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r  223 (281)
T 3svt_A          158 --------------HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPR  223 (281)
T ss_dssp             --------------CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSS
T ss_pred             --------------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCC
Confidence                          2335689999999999999998876   477877765433 1111111100000000001112234


Q ss_pred             eeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc-HHHHHHHHHHhcCCC
Q 044498          234 LTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS-INEMAEIILSFENEK  280 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s-~~el~~~i~~~~g~~  280 (366)
                      +.+++|+|++++.++...    .++++++.+|..++ ..++++.+.+.+|.+
T Consensus       224 ~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          224 QGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             CCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            678999999999998653    58999999998877 778888888888865

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.86  E-value=5.2e-22  Score=178.50  Aligned_cols=217  Identities=12%  Similarity=0.065  Sum_probs=154.2

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHH
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~   91 (366)
                      |..++++||||||+|+||++++++|+++|++         |++++|.......       .....+.++.+|++|.+++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~---------v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~   87 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGAS---------VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVV   87 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            3346689999999999999999999999999         9999984322111       01234678999999999888


Q ss_pred             hhhc-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEeccccc-CCC
Q 044498           92 RMTS-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIY-PEF  157 (366)
Q Consensus        92 ~~~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vy-g~~  157 (366)
                      ++++       ++|+|||+||.......   ...+....+++|+.++.++++++.+.   + .  +||++||...+ ...
T Consensus        88 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~--~iv~~sS~~~~~~~~  164 (274)
T 1ja9_A           88 ALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-G--RIILTSSIAAVMTGI  164 (274)
T ss_dssp             HHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-E--EEEEECCGGGTCCSC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-C--EEEEEcChHhccCCC
Confidence            8775       79999999997542111   11223456889999999999998775   4 4  89999998776 321


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC-------CCC----e
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS-------TDN----F  222 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~-------~~~----~  222 (366)
                                     .+...|+.+|.+.|.+++.++.++   ++++.+++++.+ ..+.......       ...    .
T Consensus       165 ---------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  229 (274)
T 1ja9_A          165 ---------------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKID  229 (274)
T ss_dssp             ---------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHH
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHH
Confidence                           234579999999999999988875   888988876543 2222211110       000    0


Q ss_pred             EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          223 EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       223 ~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+........+++++|+|+++..++..+    .+++|++.+|.
T Consensus       230 ~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          230 EGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            00111223456899999999999999653    47899998763

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.86  E-value=2.4e-20  Score=165.47  Aligned_cols=212  Identities=14%  Similarity=0.119  Sum_probs=146.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.....    .++.++.+|++|.+++.++++      
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAK---------VTGFDQAFTQEQ----YPFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCCCSSC----CSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCchhhhc----CCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999         999998765311    136889999999998887764      


Q ss_pred             -CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||.......   ...+....+++|+.++.++++++    ++.+..  +||++||...+..           
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~~-----------  139 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG--AIVTVASDAAHTP-----------  139 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC--EEEEECchhhCCC-----------
Confidence             79999999997542111   12234556889999999998888    445566  9999999765432           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe--EEec------CCcceeeee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF--EMWG------DGKQTRSLT  235 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~--~i~~------~~~~~~~~i  235 (366)
                          ..+...|+.+|...+.+.+.++.++   ++++.++++..+ ..+...........  .+..      .......+.
T Consensus       140 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  215 (250)
T 2fwm_X          140 ----RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIA  215 (250)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCc
Confidence                2335679999999999999988775   899998876644 22222111000000  0100      011223478


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ..+|+|+++..++..+    .++.+++.+|..
T Consensus       216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          216 RPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            8999999999998652    578899988754

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=6.8e-22  Score=178.30  Aligned_cols=229  Identities=10%  Similarity=-0.018  Sum_probs=149.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------cccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......         .....+.++.+|+++++++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   75 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAK---------VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDE   75 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHH
Confidence            4578999999999999999999999999         9999987543211         112346889999999998888


Q ss_pred             hhc-------CCCEEEEcccccCCccc-------cccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccc-
Q 044498           93 MTS-------GVDNMSNLAADMGGMGF-------IQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACI-  153 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~v-  153 (366)
                      +++       ++|++||+||.......       ...+....+++|+.++.++++++.+.    + .  +||++||... 
T Consensus        76 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g--~iv~isS~~~~  152 (278)
T 1spx_A           76 ILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G--EIVNISSIASG  152 (278)
T ss_dssp             HHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C--EEEEECCTTSS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C--eEEEEeccccc
Confidence            775       89999999997532111       22234456889999999999888764    5 6  9999999765 


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCe-------
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNF-------  222 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~-------  222 (366)
                      +..               ..+...|+.+|...+.+.+.++.+   +++++.+++++.+. .+...........       
T Consensus       153 ~~~---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  217 (278)
T 1spx_A          153 LHA---------------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTM  217 (278)
T ss_dssp             SSC---------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHH
T ss_pred             ccC---------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHH
Confidence            332               123457999999999999998876   48999888654331 1110000000000       


Q ss_pred             EEecCCcceeeeeeHHHHHHHHHHHHhc-----CCCCcEEecCCCcccHHHHHHHHHHhc
Q 044498          223 EMWGDGKQTRSLTFIDECVEGVLRLIKS-----DFREPLNIGSDEMVSINEMAEIILSFE  277 (366)
Q Consensus       223 ~i~~~~~~~~~~i~v~D~a~~~~~~l~~-----~~~~~~~i~~~~~~s~~el~~~i~~~~  277 (366)
                      ...........+.+++|+|++++.++..     -.++.+++.+|..+++.++++.+.+++
T Consensus       218 ~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          218 ATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            0000000113478999999999998854     248899999999999999999988754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.86  E-value=1.7e-21  Score=174.23  Aligned_cols=218  Identities=11%  Similarity=0.022  Sum_probs=153.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c-cccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D-MFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~-~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      . ...+.++.+|+++.+++.+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   76 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAH---------IVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVV   76 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            5678999999999999999999999999         99999875432110      0 234678999999999888776


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||........   ..+....+++|+.++.++++++.    +.+..  +||++||...+...   
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~---  151 (263)
T 3ai3_A           77 ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGG--AIIHNASICAVQPL---  151 (263)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEECchhhcCCC---
Confidence            5       799999999975422111   22334568899999988888775    34556  99999998776432   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHh----CCC----C-eEEecC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVT----STD----N-FEMWGD  227 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~----~~~----~-~~i~~~  227 (366)
                                  .+...|+.+|...+.+.+.++.+   +++++.+++++.+ ..+......    ...    . ......
T Consensus       152 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
T 3ai3_A          152 ------------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVAD  219 (263)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHH
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHh
Confidence                        23457999999999999998887   4888888876543 222111100    000    0 000000


Q ss_pred             C-cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          228 G-KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       228 ~-~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      . .....+.+++|+|++++.++..+    .+++|++.+|..++
T Consensus       220 ~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          220 EHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             cCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            0 12245789999999999998653    47899999887654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=1.7e-21  Score=171.82  Aligned_cols=205  Identities=13%  Similarity=0.044  Sum_probs=151.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------C
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------G   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------~   96 (366)
                      +++||||||+|+||++++++|+++|++         |++++|+..  .    ..+.++.+|+++.+++.++++      +
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~---------V~~~~r~~~--~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYR---------VVVLDLRRE--G----EDLIYVEGDVTREEDVRRAVARAQEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE---------EEEEESSCC--S----SSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEccCcc--c----cceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence            578999999999999999999999999         999998765  1    134889999999999888876      7


Q ss_pred             CCEEEEcccccCCcccccc-------CcchhhhhhHHHHHHHHHHHHHcCCCc--------eeEEEEecccccCCCCCCC
Q 044498           97 VDNMSNLAADMGGMGFIQS-------NHSVIMYKNTTISFDMLEAARMNGVMS--------LTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~-------~~~~~~~~nv~~~~~ll~a~~~~~~~~--------~r~I~~SS~~vyg~~~~~~  161 (366)
                      +|++||+||..........       +....+++|+.++.++++++.+.-.+.        .+||++||...+...    
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  142 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ----  142 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC----
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----
Confidence            8999999997543211111       335568899999999999887642111        179999998766432    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHH-------HHHhCCCCeEEecCCcc
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSR-------KAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~-------~~~~~~~~~~i~~~~~~  230 (366)
                                 .+...|+.+|...+.+.+.++.++   ++++.++++..+ ..+..       ..+....+.        
T Consensus       143 -----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--------  203 (242)
T 1uay_A          143 -----------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF--------  203 (242)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS--------
T ss_pred             -----------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCC--------
Confidence                       235679999999999999888775   889988876543 11111       111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCccc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVS  265 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s  265 (366)
                      ...+.+++|+|++++.++...  .++.|++.+|..++
T Consensus       204 ~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          204 PPRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            034788999999999999764  57899999886543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.86  E-value=3.2e-21  Score=172.14  Aligned_cols=217  Identities=17%  Similarity=0.054  Sum_probs=153.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .++++||||||+|+||++++++|+++|++         |++++|+.......      ...++.++.+|+++++++.+++
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   77 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGAS---------VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELM   77 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            35689999999999999999999999999         99999875432110      1224678999999998887766


Q ss_pred             --------cCCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCC
Q 044498           95 --------SGVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 --------~~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                              .++|++||+||........   ..+....+++|+.++.++++++.    +.+..  +||++||...+..   
T Consensus        78 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  152 (260)
T 2ae2_A           78 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG--NVVFISSVSGALA---  152 (260)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE--EEEEECCGGGTSC---
T ss_pred             HHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEcchhhccC---
Confidence                    4699999999975422111   22334568899999999998884    45556  9999999765432   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-eE---EecCCcce
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-FE---MWGDGKQT  231 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~~---i~~~~~~~  231 (366)
                                  ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+...... ... ..   ........
T Consensus       153 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~  219 (260)
T 2ae2_A          153 ------------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ-DPEQKENLNKLIDRCAL  219 (260)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT-SHHHHHHHHHHHHTSTT
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhcc-ChhhHHHHHHHHhcCCC
Confidence                        1235679999999999999998876   788888876543 222222111 000 00   00111123


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ..+.+++|+|+++..++...    .++++++.+|...
T Consensus       220 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          220 RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            45789999999999998642    5789999888654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.86  E-value=7.4e-21  Score=169.50  Aligned_cols=216  Identities=13%  Similarity=0.062  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGAT---------VLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESSCC------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999         99999886543221   12356899999999998887765   


Q ss_pred             ----CCCEEEEcccccCCccc-------cccCcchhhhhhHHHHHHHHHHHHHc----------CCCceeEEEEeccccc
Q 044498           96 ----GVDNMSNLAADMGGMGF-------IQSNHSVIMYKNTTISFDMLEAARMN----------GVMSLTFFFVSSACIY  154 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~~~~r~I~~SS~~vy  154 (366)
                          ++|++||+||.......       ...+....+++|+.++.++++++...          +..  ++|++||...+
T Consensus        77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g--~iv~isS~~~~  154 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERG--VIVNTASIAAF  154 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCE--EEEEECCTHHH
T ss_pred             HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCe--EEEEEechhhc
Confidence                79999999997643211       12234556889999999999988764          233  79999997654


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcc
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      ..               ..+...|+.+|...+.+.+.++.+   +++++..++++.+ ..+......  ...........
T Consensus       155 ~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~p  217 (257)
T 3tpc_A          155 DG---------------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ--DVQDALAASVP  217 (257)
T ss_dssp             HC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSS
T ss_pred             cC---------------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH--HHHHHHHhcCC
Confidence            32               123567999999999999998887   5788888865543 112111111  00011111122


Q ss_pred             e-eeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCccc
Q 044498          231 T-RSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVS  265 (366)
Q Consensus       231 ~-~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s  265 (366)
                      . ..+..++|+|+++..++...  .++++++.+|..++
T Consensus       218 ~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          218 FPPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             SSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             CCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            2 45788999999999999764  68899999887554

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=9.4e-21  Score=168.74  Aligned_cols=217  Identities=19%  Similarity=0.121  Sum_probs=153.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-cc-ccceEEEccCCChhHHHhhhc----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DM-FCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~-~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+... ... .. .. .++.+|++|.+++.++++    
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGAL---------VALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999         9999988654 211 11 12 788999999988777654    


Q ss_pred             ---CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 ---GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                         ++|++||+||..........   +....+++|+.++.++++++..    .+..  +||++||...+..         
T Consensus        74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~~---------  142 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG--AIVNVASVQGLFA---------  142 (256)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE--EEEEECCGGGTSB---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEccccccCC---------
Confidence               79999999997643222222   2345688999999999887754    3555  9999999755421         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh----CCCCeEEecCCcceeeeeeH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT----STDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~----~~~~~~i~~~~~~~~~~i~v  237 (366)
                            ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+......    .......+........+.++
T Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T 2d1y_A          143 ------EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKP  216 (256)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCH
T ss_pred             ------CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCH
Confidence                  1234679999999999999988775   788888866543 233332210    01111111222234568899


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      +|+|++++.++..+    .++.+++.+|..+++
T Consensus       217 ~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          217 EEVAEAVLFLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence            99999999998653    578999998876543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.86  E-value=2.2e-21  Score=171.76  Aligned_cols=212  Identities=15%  Similarity=0.089  Sum_probs=140.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |+++ .|+......      .....+.++.+|++|.+++.+++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~---------V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGAN---------IVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMV   74 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5689999999999999999999999999         9998 455432111      11234688999999999888776


Q ss_pred             c-------CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEeccc-ccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSAC-IYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~-vyg~~~~  159 (366)
                      +       ++|+|||+||......   ....+....+++|+.++.++++++.+    .+..  +||++||.. .|+.   
T Consensus        75 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~---  149 (247)
T 2hq1_A           75 KTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG--KIINITSIAGIIGN---  149 (247)
T ss_dssp             HHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCE--EEEEECC----------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEcChhhccCC---
Confidence            5       7999999999754211   12334566789999998888877654    4566  999999963 3432   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                   .+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+......  ..............+.
T Consensus       150 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~  214 (247)
T 2hq1_A          150 -------------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPD--KVKEMYLNNIPLKRFG  214 (247)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH--HHHHHHHTTSTTSSCB
T ss_pred             -------------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcch--HHHHHHHhhCCCCCCC
Confidence                         124679999999999999988775   788888866543 111110000  0000001111223578


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++|+|+++..++..+    .+++|++.+|.
T Consensus       215 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          215 TPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            9999999999988642    47899998875

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.86  E-value=5e-21  Score=170.12  Aligned_cols=217  Identities=14%  Similarity=0.034  Sum_probs=149.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccc-eEEEccCCChhHHHhhh---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCH-EFHLVDLRVMDNCLRMT---   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v-~~~~~D~~~~~~l~~~~---   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......   ....+ .++.+|++|.+++.+++   
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGAR---------LILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHH
Confidence            5678999999999999999999999999         99999975432111   11234 78899999999888765   


Q ss_pred             ---cCCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           95 ---SGVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        95 ---~~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                         .++|+|||+||..........+   ....+++|+.++.++++++    ++.+.+  +||++||...+...       
T Consensus        81 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~~-------  151 (254)
T 2wsb_A           81 EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAG--AIVNLGSMSGTIVN-------  151 (254)
T ss_dssp             HHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC-------
T ss_pred             HhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEecchhccCC-------
Confidence               4799999999976432222122   2456789999977666655    445666  99999998765432       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                            +..|...|+.+|++.+.+.+.++.++   ++++.++++..+ ..+.............+........+.+++|+
T Consensus       152 ------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  225 (254)
T 2wsb_A          152 ------RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEI  225 (254)
T ss_dssp             ------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHH
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHH
Confidence                  22344789999999999999988876   889988876543 22221111000000000001112357899999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCC
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |+++..++...    .++.+++.+|.
T Consensus       226 a~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          226 AAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCcccccccCCEEEECCCE
Confidence            99999998542    57889998774

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.86  E-value=6.1e-21  Score=170.64  Aligned_cols=216  Identities=13%  Similarity=-0.005  Sum_probs=152.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......   ...++.++.+|++|.+++.++++   
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGAT---------VAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999875432111   11146889999999998888765   


Q ss_pred             ----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                          ++|++||+||.........   .+....+++|+.++.++++++.+.    + ..  +||++||...+..       
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~-------  152 (263)
T 3ak4_A           82 DALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKG--VIVNTASLAAKVG-------  152 (263)
T ss_dssp             HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC--EEEEECCGGGTSC-------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe--EEEEecccccccC-------
Confidence                7999999999754221112   233456889999999988887653    4 45  8999999765432       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHH-----hCCC---C-eEEecCCcc
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAV-----TSTD---N-FEMWGDGKQ  230 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~-----~~~~---~-~~i~~~~~~  230 (366)
                              ..+...|+.+|...+.+.+.++.++   ++++.++++..+ ..+.....     ..+.   . ...+.....
T Consensus       153 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  224 (263)
T 3ak4_A          153 --------APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP  224 (263)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC
Confidence                    1235679999999999999988875   899998876544 22221111     0000   0 000011112


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ...+.+++|+|++++.++...    .+++|++.+|..
T Consensus       225 ~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          225 LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            345889999999999998653    578999988754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.85  E-value=2.5e-21  Score=172.72  Aligned_cols=207  Identities=12%  Similarity=-0.014  Sum_probs=150.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   82 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGAR---------VIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVR   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999987543211      112346899999999998887764


Q ss_pred             -------CCCEEEEcccccC-Cccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMG-GMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~-~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|+|||+||... ......   .+....+++|+.++.++++++.+    .+..  +||++||...+...   
T Consensus        83 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~---  157 (260)
T 3awd_A           83 SVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG--VIVAIGSMSGLIVN---  157 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC--EEEEEecchhcccC---
Confidence                   7999999999654 111111   12355688999999999988764    3555  89999997654321   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-----H------HHHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-----A------AFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-----~------~~~~~~~~~~~~~~i~~  226 (366)
                                +..|...|+.+|.+.|.+++.++.+   .++++.++++..+     .      .+...+.. ..      
T Consensus       158 ----------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~------  220 (260)
T 3awd_A          158 ----------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIA-GT------  220 (260)
T ss_dssp             ----------SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHH-TC------
T ss_pred             ----------CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHh-cC------
Confidence                      2234578999999999999998887   6889988865432     1      11122222 11      


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                         ....+.+++|+|+++..++...    .+++|++.+|.
T Consensus       221 ---~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          221 ---PMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ---CcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence               1234789999999999998642    57899998875

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.85  E-value=2.1e-21  Score=173.65  Aligned_cols=220  Identities=15%  Similarity=0.074  Sum_probs=148.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------cc-------ccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DM-------FCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~-------~~v~~~~~D~~~~~   88 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......      ..       ..+.++.+|+++.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   76 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGAT---------VAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEAR   76 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTC------------CCEEEECCTTSHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHH
Confidence            4578999999999999999999999999         99999875432110      01       34689999999998


Q ss_pred             HHHhhhc-------CC-CEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEeccc
Q 044498           89 NCLRMTS-------GV-DNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSAC  152 (366)
Q Consensus        89 ~l~~~~~-------~~-d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~  152 (366)
                      ++.++++       ++ |+|||+||.......   ...+....+++|+.++.++++++.+.    + ..  +||++||..
T Consensus        77 ~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g--~iv~isS~~  154 (264)
T 2pd6_A           77 AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRG--SIINISSIV  154 (264)
T ss_dssp             HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCTH
T ss_pred             HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCc--eEEEECChh
Confidence            8877764       34 999999997642211   12234556889999999999988764    3 45  899999975


Q ss_pred             ccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCC
Q 044498          153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       153 vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~  228 (366)
                      .+..               ..+...|+.+|.+.+.+.+.++.+   .++++.++++..+. .+......  .........
T Consensus       155 ~~~~---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~  217 (264)
T 2pd6_A          155 GKVG---------------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ--KVVDKITEM  217 (264)
T ss_dssp             HHHC---------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGG
T ss_pred             hccC---------------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH--HHHHHHHHh
Confidence            4321               123567999999999999998887   58898888765331 11111100  000000011


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHH
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEM  269 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el  269 (366)
                      .....+.+++|+|+++..++...    .++.+++.+|..++....
T Consensus       218 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          218 IPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             CCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            12234788999999999998652    578899998876655443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.85  E-value=5e-21  Score=170.49  Aligned_cols=220  Identities=13%  Similarity=0.027  Sum_probs=156.0

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ..+++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   79 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS---------VVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAV   79 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCE---------EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            336789999999999999999999999999         9999987643211      1123568899999999988776


Q ss_pred             hc-------CCCEEEEcccccCCccc--cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGF--IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      ++       ++|++||+||.......  ...+.+..+++|+.++.++++++.    +.+..  ++|++||...+..    
T Consensus        80 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~----  153 (256)
T 3gaf_A           80 IKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG--AILNISSMAGENT----  153 (256)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCGGGTCC----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEcCHHHcCC----
Confidence            64       79999999997653221  122334568899999999999874    34555  8999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                 ..+...|+.+|...+.+.+.++.++   ++++..+.++.+ ..+...... ...............+.+
T Consensus       154 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~  221 (256)
T 3gaf_A          154 -----------NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT-PEIERAMLKHTPLGRLGE  221 (256)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC-HHHHHHHHTTCTTSSCBC
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC-HHHHHHHHhcCCCCCCCC
Confidence                       2335689999999999999998875   678877765533 222222110 000000011122345788


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      ++|+|++++.++...    .++++++.+|...++
T Consensus       222 ~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          222 AQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             HHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence            999999999998642    589999999876654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.85  E-value=1.3e-20  Score=169.68  Aligned_cols=219  Identities=16%  Similarity=0.081  Sum_probs=155.7

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc--
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      .+++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++  
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAY---------VVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence            35688999999999999999999999999         99999876432211   12346889999999998887764  


Q ss_pred             -----CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|++||+||..........   +.+..+++|+.++.++++++..    .+..  +||++||...+..       
T Consensus        96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~-------  166 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGG--SIINTTSYTATSA-------  166 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCE--EEEEECCGGGTSC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc--EEEEECchhhCcC-------
Confidence                 79999999997643222222   2344578999999988888754    3444  8999999766532       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-eEE---ecCCcceeeee
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-FEM---WGDGKQTRSLT  235 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~~i---~~~~~~~~~~i  235 (366)
                              ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+.......... ...   .........+.
T Consensus       167 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  238 (277)
T 4dqx_A          167 --------IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMG  238 (277)
T ss_dssp             --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCB
T ss_pred             --------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCc
Confidence                    2335679999999999999988876   788887766543 3332222221111 010   12223334578


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      .++|+|++++.++...    .++++++.+|..++
T Consensus       239 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          239 TAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             CHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            8999999999998653    58999999887543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.85  E-value=3.5e-21  Score=170.70  Aligned_cols=204  Identities=16%  Similarity=0.077  Sum_probs=148.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++||||||+|+||++++++|+++|++         |++++|+.....       ......+.++.+|+++.+++.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDR---------VAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIA   72 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            578999999999999999999999999         999998754321       1112346889999999998887765


Q ss_pred             -------CCCEEEEcccccCCcc---c---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG---F---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~---~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                             ++|+|||+||......   .   ...+....+++|+.++.++++++.    +.+.+  +||++||...+... 
T Consensus        73 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~iv~isS~~~~~~~-  149 (250)
T 2cfc_A           73 ATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG--VIVNIASVASLVAF-  149 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC-
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC--EEEEECChhhccCC-
Confidence                   7999999999754211   1   112345568899999877666554    44666  99999997665321 


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----H------HHHHHHHhCCCCeEE
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----A------AFSRKAVTSTDNFEM  224 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----~------~~~~~~~~~~~~~~i  224 (366)
                                    .+...|+.+|...+.+.+.++.++   ++++.++++..+     .      .+...+.. ..    
T Consensus       150 --------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~----  210 (250)
T 2cfc_A          150 --------------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLA-RI----  210 (250)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHT-TC----
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHh-cC----
Confidence                          235679999999999999988876   888888865432     1      11111211 11    


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                           ....+.+.+|+|++++.++..+    .++.+++.+|.
T Consensus       211 -----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          211 -----PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             -----TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             -----CCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence                 1234778999999999998753    47889998774

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.85  E-value=5.3e-21  Score=169.98  Aligned_cols=217  Identities=19%  Similarity=0.173  Sum_probs=132.3

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHh
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      |..+++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|++|.+++.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   75 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAA---------VVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKA   75 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            4446789999999999999999999999999         99999876532211      12346789999999998887


Q ss_pred             hhc-------CCCEEEEcccccCCcc------ccccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccC
Q 044498           93 MTS-------GVDNMSNLAADMGGMG------FIQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg  155 (366)
                      +++       ++|++||+||..+...      ....+....+++|+.++.++.+++    ++.+..  +||++||...|.
T Consensus        76 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~  153 (253)
T 3qiv_A           76 MADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG--AIVNQSSTAAWL  153 (253)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEEEECC-----
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC--EEEEECCccccC
Confidence            765       7999999999742111      112233456889999966655554    445555  899999986652


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCccee
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                                        +...|+.+|.+.+.+.+.++.++   ++++..++++.+..-+....................
T Consensus       154 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (253)
T 3qiv_A          154 ------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLS  215 (253)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCC
Confidence                              13459999999999999999886   688888876654221111111001111111222334


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .+..++|+|+++..++...    .+++|++.+|..+
T Consensus       216 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          216 RMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             ----CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             CCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence            5678999999999998643    5899999988654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.85  E-value=5.3e-21  Score=171.05  Aligned_cols=216  Identities=13%  Similarity=0.020  Sum_probs=152.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc--
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      .++++||||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++  
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGAS---------AVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999         99999886543211   12346889999999998888775  


Q ss_pred             -----CCCEEEEcccccCCccc---------cccCcchhhhhhHHHHHHHHHHHHHc----------CCCceeEEEEecc
Q 044498           96 -----GVDNMSNLAADMGGMGF---------IQSNHSVIMYKNTTISFDMLEAARMN----------GVMSLTFFFVSSA  151 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~---------~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~~~~r~I~~SS~  151 (366)
                           ++|+|||+||.......         ...+....+++|+.++.++++++.+.          +..  +||++||.
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~--~iv~isS~  158 (265)
T 2o23_A           81 KGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRG--VIINTASV  158 (265)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCE--EEEEECCT
T ss_pred             HHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCc--EEEEeCCh
Confidence                 79999999997643211         12234556889999999999988765          455  89999997


Q ss_pred             cccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecC
Q 044498          152 CIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGD  227 (366)
Q Consensus       152 ~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~  227 (366)
                      ..+..               ..+...|+.+|.+.+.+.+.++.++   ++++.+++++.+ ..+......  ........
T Consensus       159 ~~~~~---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~  221 (265)
T 2o23_A          159 AAFEG---------------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE--KVCNFLAS  221 (265)
T ss_dssp             HHHHC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHH
T ss_pred             hhcCC---------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH--HHHHHHHH
Confidence            66532               1235679999999999998887774   788888865533 111111100  00000000


Q ss_pred             Ccce-eeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCcc
Q 044498          228 GKQT-RSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMV  264 (366)
Q Consensus       228 ~~~~-~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~  264 (366)
                      .... ..+.+++|+|+++..++...  .++.+++.+|..+
T Consensus       222 ~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          222 QVPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             TCSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             cCCCcCCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            0111 34678999999999999764  5788999887543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.85  E-value=1.4e-21  Score=173.14  Aligned_cols=206  Identities=14%  Similarity=0.041  Sum_probs=150.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++++|||||+|+||++++++|+++|++         |+++++.......       .....+.++.+|++|.+++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   72 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYN---------VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAM   72 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            35678999999999999999999999999         9988875432211       1223467899999999988877


Q ss_pred             hc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||........   ..+.+..+++|+.++.++++++    ++.+..  +||++||...+..   
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  147 (246)
T 3osu_A           73 IKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSG--AIINLSSVVGAVG---  147 (246)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHHC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC--EEEEEcchhhcCC---
Confidence            65       799999999976432222   2233456899999999999988    445555  8999999755422   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGD  227 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~  227 (366)
                                  ..+...|+.+|...+.+.+.++.++   ++++..++++.+         ..+...... ..       
T Consensus       148 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~-------  207 (246)
T 3osu_A          148 ------------NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLT-QI-------  207 (246)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHT-TC-------
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHh-cC-------
Confidence                        1235679999999999999988854   788877755432         222222222 11       


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                        ....+...+|+|+++..++...    .++++++.+|.
T Consensus       208 --p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          208 --PLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             --TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             --CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence              2234678999999999998653    48899998875

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.85  E-value=2.1e-20  Score=169.64  Aligned_cols=225  Identities=14%  Similarity=0.034  Sum_probs=155.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   85 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGAT---------VIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVS   85 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcC
Confidence            5689999999999999999999999999         99999986532211   12356899999999999998876   


Q ss_pred             CCCEEEEcccccCCc-cccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           96 GVDNMSNLAADMGGM-GFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                      ++|++||+||..... .....+.+..+.+|+.++.++++++.....+  |||++||...+........  ...+..+..+
T Consensus        86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--riv~isS~~~~~~~~~~~~--~~~~~~~~~~  161 (291)
T 3rd5_A           86 GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD--RVVTVSSMAHWPGRINLED--LNWRSRRYSP  161 (291)
T ss_dssp             CEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE--EEEEECCGGGTTCCCCSSC--TTCSSSCCCH
T ss_pred             CCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--heeEeechhhccCCCCccc--ccccccCCCC
Confidence            579999999976532 1234456778999999999999999998877  9999999877654322111  1111124456


Q ss_pred             CCchHHHHHHHHHHHHHHHHHc---C--CcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHH
Q 044498          175 QDAYGLEKLATEGLCKHYTKDF---E--IECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI  248 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~---~--~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l  248 (366)
                      ...|+.+|++.+.+.+.++.++   +  +++..+.++.+. .+.......... .+ ......+-....+|+|+.++.++
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~A~~~~~l~  239 (291)
T 3rd5_A          162 WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGD-AL-MSAATRVVATDADFGARQTLYAA  239 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------CHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHH-HH-HHHHHHHHhCCHHHHHHHHHHHH
Confidence            7789999999999999988775   4  788777766441 111111100000 00 00001112235899999999998


Q ss_pred             hcC--CCCcEEecCC
Q 044498          249 KSD--FREPLNIGSD  261 (366)
Q Consensus       249 ~~~--~~~~~~i~~~  261 (366)
                      ..+  .++.+.+.+|
T Consensus       240 ~~~~~~G~~~~vdgG  254 (291)
T 3rd5_A          240 SQDLPGDSFVGPRFG  254 (291)
T ss_dssp             HSCCCTTCEEEETTS
T ss_pred             cCCCCCCceeCCccc
Confidence            775  5677777654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.85  E-value=3.4e-22  Score=172.08  Aligned_cols=189  Identities=16%  Similarity=0.054  Sum_probs=142.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhc---CCCE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTS---GVDN   99 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~---~~d~   99 (366)
                      |+||||||+|+||++++++|+++  +         |++++|+........ ..+..++.+|++|++++.++++   ++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~---------V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--D---------LLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--E---------EEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--C---------EEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCE
Confidence            57999999999999999999988  8         999998754322110 0111788899999999999887   8999


Q ss_pred             EEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCC
Q 044498          100 MSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQD  176 (366)
Q Consensus       100 vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~  176 (366)
                      |||+||......   ....+....+++|+.++.++++++++.+.+  +||++||...|..               ..+..
T Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~iv~~sS~~~~~~---------------~~~~~  132 (207)
T 2yut_A           70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGA--RAVFFGAYPRYVQ---------------VPGFA  132 (207)
T ss_dssp             EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEE--EEEEECCCHHHHS---------------STTBH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCc--EEEEEcChhhccC---------------CCCcc
Confidence            999999754221   122334556899999999999999766666  9999999877632               23456


Q ss_pred             chHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          177 AYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       177 ~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      .|+.+|...|.+++.++.+   .++++.++++..+..-+   .        .+.+...+.+++++|+|++++.+++.+
T Consensus       133 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~---~--------~~~~~~~~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          133 AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGL---W--------APLGGPPKGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG---G--------GGGTSCCTTCBCHHHHHHHHHHHHC--
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC---c--------cccCCCCCCCCCHHHHHHHHHHHHhCC
Confidence            8999999999999998887   58999999876542111   1        112233467899999999999999875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.85  E-value=1.1e-21  Score=175.09  Aligned_cols=218  Identities=19%  Similarity=0.162  Sum_probs=152.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   83 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAH---------VVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVA   83 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999987643211      112346788999999988877664


Q ss_pred             -------CCCEEEEcccccCCc-cc---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGM-GF---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~-~~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||..... ..   ...+....+++|+.++.++++++.    +.+..  +||++||...|...   
T Consensus        84 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~---  158 (260)
T 2zat_A           84 MAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGG--SVLIVSSVGAYHPF---  158 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCGGGTSCC---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEEechhhcCCC---
Confidence                   799999999964311 11   112234568899999988888765    45666  99999998776421   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                  .+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+......................+.+
T Consensus       159 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (260)
T 2zat_A          159 ------------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGN  226 (260)
T ss_dssp             ------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBC
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCC
Confidence                        235679999999999999988875   788888865533 1111111100000000011112245789


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      ++|+|+++..++..+    .++++++.+|...+
T Consensus       227 ~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          227 PEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             GGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            999999999998653    57899999987665

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.85  E-value=1.3e-20  Score=168.54  Aligned_cols=210  Identities=17%  Similarity=0.095  Sum_probs=150.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+...     ..++.++.+|++|.+++.++++      
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSK---------VIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999         9999987654     2346889999999998887764      


Q ss_pred             -CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||.......   ...+....+++|+.++.++++++.+    .+..  +||++||...+..           
T Consensus        73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~-----------  139 (264)
T 2dtx_A           73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDP--SIVNISSVQASII-----------  139 (264)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC--EEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc--EEEEECCchhccC-----------
Confidence             79999999997542211   1223455688999999888888765    3456  9999999866532           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHHHHh---CCCC------eEEecCCcceeeee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRKAVT---STDN------FEMWGDGKQTRSLT  235 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~~~~---~~~~------~~i~~~~~~~~~~i  235 (366)
                          ..+...|+.+|...+.+.+.++.+++  +++.+++++.+ ..+......   ....      ...+........+.
T Consensus       140 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  215 (264)
T 2dtx_A          140 ----TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG  215 (264)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCB
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCc
Confidence                12356799999999999999988875  77777766543 222221110   0000      00000111223578


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++|+|++++.++...    .++.+++.+|.
T Consensus       216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          216 KPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            9999999999998652    57889998774

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=5.4e-20  Score=162.77  Aligned_cols=195  Identities=11%  Similarity=-0.044  Sum_probs=139.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++||||||+|+||++++++|+++|  ++         |++++|+.......   ....+.++.+|+++.+++.++++ 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~---------V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRH---------IIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCE---------EEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcE---------EEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHH
Confidence            46789999999999999999999999  99         99999976543211   12356899999999988887765 


Q ss_pred             --------CCCEEEEcccccC-Ccc---ccccCcchhhhhhHHHHHHHHHHHHHc----------C-----CCceeEEEE
Q 044498           96 --------GVDNMSNLAADMG-GMG---FIQSNHSVIMYKNTTISFDMLEAARMN----------G-----VMSLTFFFV  148 (366)
Q Consensus        96 --------~~d~vi~~a~~~~-~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~----------~-----~~~~r~I~~  148 (366)
                              ++|+|||+||... ...   ....+....+++|+.++.++++++...          +     ..  +||++
T Consensus        73 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~iv~i  150 (250)
T 1yo6_A           73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRA--AVITI  150 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTC--EEEEE
T ss_pred             HHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCc--EEEEe
Confidence                    8999999999754 111   112233456889999999988887653          4     55  89999


Q ss_pred             ecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEe
Q 044498          149 SSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       149 SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~  225 (366)
                      ||...+......      .  .+..+...|+.+|++.+.+++.++.++   ++++.+++++.+..-+.   . .      
T Consensus       151 sS~~~~~~~~~~------~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~-~------  212 (250)
T 1yo6_A          151 SSGLGSITDNTS------G--SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG---G-K------  212 (250)
T ss_dssp             CCGGGCSTTCCS------T--TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------
T ss_pred             ccCccccCCccc------c--cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC---C-C------
Confidence            997665432110      0  122456789999999999999998886   79999888775522111   1 0      


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                            ..+++.+|+|+.++.++...
T Consensus       213 ------~~~~~~~~~a~~~~~~~~~~  232 (250)
T 1yo6_A          213 ------NAALTVEQSTAELISSFNKL  232 (250)
T ss_dssp             ------------HHHHHHHHHHHTTC
T ss_pred             ------CCCCCHHHHHHHHHHHHhcc
Confidence                  13578999999999999764

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.85  E-value=3.1e-20  Score=166.25  Aligned_cols=214  Identities=14%  Similarity=0.074  Sum_probs=150.0

Q ss_pred             CCCeEEEEcCCC-chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGG-FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG-~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||+| .||++++++|+++|++         |++++|+......       .....+.++.+|+++.+++.++
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGAD---------VVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDAL   91 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCE---------EEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHH
Confidence            668999999998 5999999999999999         9999987653211       1123578999999999988876


Q ss_pred             hc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc-----CCCceeEEEEecccccCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN-----GVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~r~I~~SS~~vyg~~~  158 (366)
                      ++       ++|++||+||..........   +....+++|+.++.++++++...     +..  +||++||...+.   
T Consensus        92 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~iv~~sS~~~~~---  166 (266)
T 3o38_A           92 ITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGG--VIVNNASVLGWR---  166 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCE--EEEEECCGGGTC---
T ss_pred             HHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCe--EEEEeCCHHHcC---
Confidence            64       68999999997643222222   23456889999999999988764     444  899999975542   


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                  +..+...|+.+|.+.+.+.+.++.+   .++++..++++.+ ..+...... ...............+
T Consensus       167 ------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~  233 (266)
T 3o38_A          167 ------------AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRA  233 (266)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSC
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCC
Confidence                        2234678999999999999998887   4788888765543 222222211 1111112223334567


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+++|+|+++..++...    .++++++.+|.
T Consensus       234 ~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          234 AEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             CCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            89999999999998652    57899998774

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.84  E-value=3.8e-20  Score=165.09  Aligned_cols=216  Identities=11%  Similarity=0.016  Sum_probs=150.5

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-cccccceEEEccCCChhHHHhhhc----
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-EDMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-~~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      .++++||||||+|+||++++++|+++|++         |++++|+...... ....++.++.+|+++.+++.++++    
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHR---------VIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCC---------EEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999         9999998754321 122357899999999998877664    


Q ss_pred             ---CCCEEEEcccccCCcc--ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 ---GVDNMSNLAADMGGMG--FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                         ++|++||+||......  ....+....+++|+.++.++++++..    .+..  ++|++||...+..          
T Consensus        96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~~----------  163 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVA--DIVHISDDVTRKG----------  163 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC--EEEEECCGGGGTC----------
T ss_pred             hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--EEEEECChhhcCC----------
Confidence               6999999999764321  11112235688999999999888754    3455  8999999765432          


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                           ..+...|+.+|++.+.+.+.++.+++  +++..+.++.+..-....   ...............+..++|+|+++
T Consensus       164 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~~r~~~~edva~~v  235 (260)
T 3gem_A          164 -----SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSALGIEPGAEVIYQSL  235 (260)
T ss_dssp             -----CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCSCCCCCTHHHHHHH
T ss_pred             -----CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                 22356799999999999999998874  777777655431100000   00000001111223356799999999


Q ss_pred             HHHHhcC--CCCcEEecCCCccc
Q 044498          245 LRLIKSD--FREPLNIGSDEMVS  265 (366)
Q Consensus       245 ~~~l~~~--~~~~~~i~~~~~~s  265 (366)
                      +.+++..  .++++++.+|..++
T Consensus       236 ~~L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          236 RYLLDSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HHHHHCSSCCSCEEEESTTTTTC
T ss_pred             HHHhhCCCCCCCEEEECCCcccC
Confidence            9999654  68999999887654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.84  E-value=3.1e-20  Score=166.22  Aligned_cols=213  Identities=16%  Similarity=0.106  Sum_probs=152.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|........     ..+.+|+++.+.+.++++      
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~---------V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~   92 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGAR---------VAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGL   92 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhc
Confidence            5678999999999999999999999999         99999876543222     344789999887766553      


Q ss_pred             -CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||..........   +....+++|+.++.++++++    ++.+..  ++|++||...+.            
T Consensus        93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~~~------------  158 (266)
T 3uxy_A           93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGG--AIVNVASCWGLR------------  158 (266)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCSBTTB------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEECCHHhCC------------
Confidence             79999999997653222222   23445789999999999988    455555  899999976542            


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-----EEecCCcceeeeeeHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-----EMWGDGKQTRSLTFID  238 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-----~i~~~~~~~~~~i~v~  238 (366)
                         +..+...|+.+|.+.+.+.+.++.++   ++++..++++.+ ..+...........     ...........+.+++
T Consensus       159 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  235 (266)
T 3uxy_A          159 ---PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE  235 (266)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHH
Confidence               22345679999999999999998876   788888866543 23322222111000     0112223345678999


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      |+|++++.++...    .++++++.+|..++
T Consensus       236 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          236 DIADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            9999999998653    48899999887653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.1e-20  Score=167.60  Aligned_cols=215  Identities=16%  Similarity=0.115  Sum_probs=150.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|........        ....+.++.+|++|.+++.++
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGAN---------IVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            4578999999999999999999999999         99999854322110        133568899999999988877


Q ss_pred             hc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||.........   .+....+++|+.++.++++++    ++.+..  +||++||...+..   
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~---  169 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG--RIINIASAHGLVA---  169 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC---
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEECCcccccC---
Confidence            64       7999999999764322222   223456889999999999987    344555  8999999765432   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC---------CCC-eEEe
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS---------TDN-FEMW  225 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~---------~~~-~~i~  225 (366)
                                  ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+.......         ... ....
T Consensus       170 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (281)
T 3v2h_A          170 ------------SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVM  237 (281)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHH
Confidence                        1235679999999999999998875   788877755433 2221111110         000 0112


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ........+.+++|+|++++.++...    .++++++.+|.
T Consensus       238 ~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          238 LKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             --CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             HhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            33445567899999999999998653    58899998874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=1.2e-20  Score=168.57  Aligned_cols=208  Identities=12%  Similarity=0.019  Sum_probs=152.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c-cccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D-MFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~-~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      . ...+.++.+|+++++++.+++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGAN---------VAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence            5689999999999999999999999999         99999876532111      1 135688999999999888776


Q ss_pred             c-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||..........+   ....+++|+.++.++++++.+.    +..  ++|++||...+.  .  
T Consensus        80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~--~--  153 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSG--RVVLTSSITGPI--T--  153 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSC--EEEEECCSBTTT--B--
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEechhhcc--C--
Confidence            4       799999999976432222222   3445889999999988887764    666  999999964320  0  


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HH--------HHHHHHhCCCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AA--------FSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~--------~~~~~~~~~~~~~i~~~~  228 (366)
                                +..+...|+.+|...+.+.+.++.+   +++++..++++.+ ..        +...... ..        
T Consensus       154 ----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~--------  214 (262)
T 3pk0_A          154 ----------GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMAR-SI--------  214 (262)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHT-TS--------
T ss_pred             ----------CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHh-cC--------
Confidence                      1234568999999999999999888   5899888866543 11        1222221 11        


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                       ....+...+|+|+++..++...    .++++++.+|..+
T Consensus       215 -p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          215 -PAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             -TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             -CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence             1223678999999999998643    5889999988644

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.84  E-value=1.8e-20  Score=167.30  Aligned_cols=215  Identities=9%  Similarity=0.004  Sum_probs=148.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc----c----cccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME----D----MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~----~----~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......    .    ..++.++.+|++|++++.++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGAR---------LLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRL   76 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHH
Confidence            5678999999999999999999999999         99999875432111    0    11468899999999988887


Q ss_pred             hc------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           94 TS------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        94 ~~------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      ++      ++|++||+||........   ..+....+++|+.++.++++++.    +.+..  +||++||...+...   
T Consensus        77 ~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~---  151 (260)
T 2z1n_A           77 FEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWG--RMVYIGSVTLLRPW---  151 (260)
T ss_dssp             HHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC---
T ss_pred             HHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEECchhhcCCC---
Confidence            75      599999999965322111   22334568899999866666554    45666  99999998765421   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHH----------HHhCCCCeEEecC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRK----------AVTSTDNFEMWGD  227 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~----------~~~~~~~~~i~~~  227 (366)
                                  .+...|+.+|...+.+.+.++.++   ++++.+++++.+..-+..          .............
T Consensus       152 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T 2z1n_A          152 ------------QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS  219 (260)
T ss_dssp             ------------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh
Confidence                        234579999999999999988776   788888876644211100          0000000000111


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ......+.+++|+|+++..++...    .++.+++.+|.
T Consensus       220 ~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          220 RIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            112234779999999999998652    57889988774

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.84  E-value=6.6e-21  Score=170.48  Aligned_cols=213  Identities=10%  Similarity=0.034  Sum_probs=150.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +|+++|||||+|+||++++++|+++|++         |++++|.......       .....+.++.+|+++.+++.+++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   76 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYS---------VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIV   76 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCE---------EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            4678999999999999999999999999         9998776543211       11235789999999999888776


Q ss_pred             c-------CCCEEEEccccc--CCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCC
Q 044498           95 S-------GVDNMSNLAADM--GGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~--~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +       ++|++||+||..  ......   ..+....+++|+.++.++++++    ++.+..  ++|++||...++.. 
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~iss~~~~~~~-  153 (264)
T 3i4f_A           77 EEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFG--RIINYGFQGADSAP-  153 (264)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCTTGGGCC-
T ss_pred             HHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC--eEEEEeechhcccC-
Confidence            4       799999999942  211111   2223456899999999999988    555666  89999997544221 


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHH----HHHHHhCCCCeEEecCCcc
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAF----SRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~----~~~~~~~~~~~~i~~~~~~  230 (366)
                                  +..+...|+.+|.+.+.+.+.++.+   .++++..++++.+ ..+    .......      ......
T Consensus       154 ------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~------~~~~~p  215 (264)
T 3i4f_A          154 ------------GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQL------KEHNTP  215 (264)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC------------
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHH------HhhcCC
Confidence                        2234678999999999999998887   4788888865433 111    1111110      011122


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ...+..++|+|+++..++...    .++++++.+|...
T Consensus       216 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          216 IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             --CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            234678999999999998653    5899999988644

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.84  E-value=3e-20  Score=165.38  Aligned_cols=216  Identities=15%  Similarity=0.071  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......    .....+.++.+|++|.+++.++++  
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   73 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGAN---------IVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALA   73 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999         9999987652110    112346788999999998888775  


Q ss_pred             -----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|++||+||........   ..+....+++|+.++.++.+++    ++.+..  +||++||...+...      
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~------  145 (255)
T 2q2v_A           74 EREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWG--RIINIASVHGLVGS------  145 (255)
T ss_dssp             HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCGGGTSCC------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEEcCchhccCC------
Confidence                 799999999975422111   2233456889999766665554    566666  99999998665321      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHH----hCCCCe----EEe-cCCcc
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAV----TSTDNF----EMW-GDGKQ  230 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~----~~~~~~----~i~-~~~~~  230 (366)
                               .+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+.....    ..+...    ..+ .....
T Consensus       146 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  216 (255)
T 2q2v_A          146 ---------TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQP  216 (255)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCT
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCC
Confidence                     224579999999999999998875   688888876543 22211111    000000    001 12223


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ...+++++|+|++++.++..+    .++.|++.+|..
T Consensus       217 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          217 SLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             TCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            346889999999999998652    478999988754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.84  E-value=9.6e-21  Score=170.66  Aligned_cols=215  Identities=16%  Similarity=0.081  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   91 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLR---------VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA   91 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            5678999999999999999999999999         99999876432110      12346789999999998877664


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc------CCCceeEEEEecccccCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN------GVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~------~~~~~r~I~~SS~~vyg~~~~  159 (366)
                             ++|++||+||..........   +....+++|+.++.++++++.+.      +..  +||++||...+..   
T Consensus        92 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g--~iv~isS~~~~~~---  166 (277)
T 2rhc_B           92 AVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG--RIVNIASTGGKQG---  166 (277)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEE--EEEEECCGGGTSC---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCe--EEEEECccccccC---
Confidence                   69999999997542222222   23456889999999999987654      445  8999999754321   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh---C------CCCeEEec
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT---S------TDNFEMWG  226 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~---~------~~~~~i~~  226 (366)
                                  ..+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+......   .      ......+.
T Consensus       167 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T 2rhc_B          167 ------------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT  234 (277)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHH
Confidence                        1235679999999999999988875   678888866543 222211100   0      00000000


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .......+++++|+|++++.++..+    .++++++.+|.
T Consensus       235 ~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          235 ARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            1112245789999999999998653    57889998774

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.84  E-value=2.1e-20  Score=167.72  Aligned_cols=212  Identities=17%  Similarity=0.134  Sum_probs=151.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......    .+..+.+|++|.+++.++++      
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAK---------VVSVSLDEKSDVN----VSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCC--CTT----SSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCchhccC----ceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            6789999999999999999999999999         9999987654322    35789999999998887764      


Q ss_pred             -CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||..........+   ....+++|+.++.++++++..    .+..  ++|++||...|...          
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~~----------  147 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHG--SIINIASVQSYAAT----------  147 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSBC----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC--EEEEECchhhccCC----------
Confidence             799999999976432222222   234578999999988887654    4555  89999998766432          


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcH-HHHHHHHHh---CCCC------eEEecCCcceeeee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAP-AAFSRKAVT---STDN------FEMWGDGKQTRSLT  235 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~-~~~~~~~~~---~~~~------~~i~~~~~~~~~~i  235 (366)
                           .+...|+.+|.+.+.+.+.++.++  ++++..+.++.+ ..+......   ....      ...+........+.
T Consensus       148 -----~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (269)
T 3vtz_A          148 -----KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIG  222 (269)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCB
T ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCc
Confidence                 235679999999999999999887  677777755433 222222110   0000      00011112234577


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +++|+|++++.++...    .++++++.+|..
T Consensus       223 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          223 RPEEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            8999999999998653    588999998853

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.84  E-value=9.5e-21  Score=168.03  Aligned_cols=215  Identities=11%  Similarity=-0.005  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......     ...++.++.+|+++.+++.++++ 
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAK---------VMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHH
Confidence            5678999999999999999999999999         99999875432111     01356899999999998887764 


Q ss_pred             ------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCC-CceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGV-MSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~-~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|+|||+||........   ..+....+++|+.++.++.+++    ++.+. .  +||++||...+...    
T Consensus        76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~--~iv~isS~~~~~~~----  149 (251)
T 1zk4_A           76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA--SIINMSSIEGFVGD----  149 (251)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCE--EEEEECCGGGTSCC----
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCC--EEEEeCCchhccCC----
Confidence                  599999999975322111   1223456889999877666554    34455 5  89999998765422    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH-----cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD-----FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~-----~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                 .+...|+.+|.+.+.+.+.++.+     .++++.++++..+ ..+.... .................++
T Consensus       150 -----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~  217 (251)
T 1zk4_A          150 -----------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEEAMSQRTKTPMGHIG  217 (251)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHHHHTSTTTCTTSSCB
T ss_pred             -----------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-CchhhhHHHhhcCCCCCCc
Confidence                       23567999999999999887764     4688888876543 2222110 0000000001111223578


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +++|+|+++..++...    .++.+++.+|..
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          218 EPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            9999999999998653    478899988754

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.84  E-value=2.6e-20  Score=166.23  Aligned_cols=216  Identities=13%  Similarity=0.000  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC-CCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW-NKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r-~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++| +......      .....+.++.+|+++.+++.+++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   76 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAK---------VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLV   76 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            4578999999999999999999999999         999998 4322111      01234678999999999887776


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       ++|+|||+||........   ..+....+++|+.++.++++++.+.    + ..  +||++||...+.    
T Consensus        77 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~--~iv~isS~~~~~----  150 (261)
T 1gee_A           77 QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKG--TVINMSSVHEKI----  150 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC--EEEEECCGGGTS----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCC--EEEEeCCHHhcC----
Confidence            5       799999999976432111   2233456889999998888776543    4 55  899999975432    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                 +..+...|+.+|.+.+.+.+.++.++   ++++.++++..+ ..+......................+.
T Consensus       151 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (261)
T 1gee_A          151 -----------PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIG  219 (261)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCB
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCc
Confidence                       22346789999999999998888775   889988876533 111111100000000000011123478


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +++|+|++++.++...    .++++++.+|..
T Consensus       220 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          220 EPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence            9999999999998642    578899988764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.84  E-value=2.6e-21  Score=171.35  Aligned_cols=205  Identities=15%  Similarity=0.026  Sum_probs=145.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|++|.+++.+++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   76 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGST---------VIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAF   76 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHH
Confidence            4678999999999999999999999999         99999875432110       1234688999999999888876


Q ss_pred             c-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|+|||+||.......   ...+....+++|+.++.++++++    ++.+.+  +||++||...+...   
T Consensus        77 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~---  151 (248)
T 2pnf_A           77 EEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWG--RIVNISSVVGFTGN---  151 (248)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCE--EEEEECCHHHHHCC---
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc--EEEEEccHHhcCCC---
Confidence            5       79999999997542211   12233456889999996666554    445666  99999997543211   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH---------HHHHHHHhCCCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA---------AFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~---------~~~~~~~~~~~~~~i~~~~  228 (366)
                                  .+...|+.+|...+.+.+.++.++   ++++.+++++.+.         .+...... ..        
T Consensus       152 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~--------  210 (248)
T 2pnf_A          152 ------------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKE-QI--------  210 (248)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHH-TC--------
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHh-cC--------
Confidence                        124579999999999999888764   6888888654321         11111111 11        


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                       ....+++++|+|+++..++...    .+++|++.+|.
T Consensus       211 -~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          211 -PLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             -TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -CCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence             1234789999999999998652    47889998763

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.84  E-value=6.4e-20  Score=163.16  Aligned_cols=214  Identities=16%  Similarity=0.108  Sum_probs=150.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++   
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGAR---------VVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR   74 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999         99999875432111   12246788999999998887765   


Q ss_pred             ----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHH----HHHHHHHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFD----MLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~----ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||.........   .+....+++|+.++..    ++..+++.+..  +||++||...+..        
T Consensus        75 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~--------  144 (254)
T 1hdc_A           75 EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG--SIVNISSAAGLMG--------  144 (254)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC--------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC--EEEEECchhhccC--------
Confidence                7999999999754221112   2334568899999874    44555555666  9999999766532        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee-eHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT-FIDE  239 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i-~v~D  239 (366)
                             ..+...|+.+|...+.+.+.++.++   ++++.++++..+ ..+......  ..............+. +.+|
T Consensus       145 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~p~~~~~~~~~d  215 (254)
T 1hdc_A          145 -------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGE  215 (254)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHH
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch--hHHHHHHhcCCCCCCCCCHHH
Confidence                   1235679999999999999988774   788888876644 333332211  1000001111223467 8999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +|++++.++..+    .++.+++.+|..
T Consensus       216 vA~~v~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          216 IAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence            999999998653    578899988753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.84  E-value=2.8e-20  Score=167.15  Aligned_cols=215  Identities=14%  Similarity=0.011  Sum_probs=145.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |+++ .|+......      .....+.++.+|+++.+++.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   95 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWR---------VGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMF   95 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            4578999999999999999999999999         8777 444332111      11235689999999998887766


Q ss_pred             c-------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHHc-------CCCceeEEEEecccccCC
Q 044498           95 S-------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARMN-------GVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~~-------~~~~~r~I~~SS~~vyg~  156 (366)
                      +       ++|++||+||...... .   ...+....+++|+.++.++++++...       +..  +||++||...+..
T Consensus        96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~  173 (272)
T 4e3z_A           96 SAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGG--AIVNVSSMAAILG  173 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE--EEEEECCTHHHHC
T ss_pred             HHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCC--EEEEEcchHhccC
Confidence            4       7899999999764311 1   22234556899999999999888654       233  8999999765432


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCccee
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      .              ..+...|+.+|++.+.+.+.++.++   ++++..++++.+ ..+...... ..............
T Consensus       174 ~--------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~  238 (272)
T 4e3z_A          174 S--------------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL-PDRAREMAPSVPMQ  238 (272)
T ss_dssp             C--------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTS
T ss_pred             C--------------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCC-hHHHHHHhhcCCcC
Confidence            1              1124569999999999999988876   788888866544 222221111 01111111222334


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+..++|+|++++.++...    .+++|++.+|.
T Consensus       239 ~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          239 RAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence            4678999999999998643    47899998763

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.84  E-value=1.2e-20  Score=169.36  Aligned_cols=218  Identities=18%  Similarity=0.109  Sum_probs=150.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++++|||||+|+||++++++|+++|++         |+++++.......       .....+.++.+|++|.+++.++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   93 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMA---------VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERC   93 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCE---------EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            35678999999999999999999999999         9998855432211       1234578999999999988776


Q ss_pred             hc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||........   ..+....+.+|+.++.++++++..    .+..  +||++||...+..   
T Consensus        94 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~---  168 (269)
T 3gk3_A           94 AEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFG--RIVNIGSVNGSRG---  168 (269)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHHC---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEeCChhhccC---
Confidence            64       799999999976432221   223345688999999988888754    4455  8999999755422   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                  ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+. .+...... ...............+.
T Consensus       169 ------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~  235 (269)
T 3gk3_A          169 ------------AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ-DVLEAKILPQIPVGRLG  235 (269)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCB
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch-hHHHHHhhhcCCcCCcc
Confidence                        2235679999999999999888875   7888777554331 11111110 00000011112234567


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      .++|+|+++..++...    .++++++.+|..++
T Consensus       236 ~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          236 RPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             CHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            8999999999998653    48899999887653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.84  E-value=1.8e-20  Score=168.39  Aligned_cols=217  Identities=12%  Similarity=0.068  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----ccccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----MEDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|......     ......+.++.+|++|.+++.++.+ 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  100 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAH---------VLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE  100 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            5688999999999999999999999999         999997643211     1122346889999999988776643 


Q ss_pred             -----CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|++||+||..........   +....+++|+.++.++++++.    +.+..  +||++||...+..       
T Consensus       101 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~IV~isS~~~~~~-------  171 (273)
T 3uf0_A          101 LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG--RIVTIASMLSFQG-------  171 (273)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC-------
T ss_pred             HHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEEcchHhcCC-------
Confidence                 79999999997653222222   234568899999999998774    34555  8999999765532       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                              ..+...|+.+|.+.+.+.+.++.+   .++++..++++.+ ..+......................+..++|
T Consensus       172 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  243 (273)
T 3uf0_A          172 --------GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPED  243 (273)
T ss_dssp             --------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGG
T ss_pred             --------CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHH
Confidence                    223567999999999999999887   4788888865533 1111111000000000000111234678999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      +|+++..++...    .++++++.+|...
T Consensus       244 va~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          244 MVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            999999998652    5889999988654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.84  E-value=7e-21  Score=168.81  Aligned_cols=214  Identities=15%  Similarity=0.066  Sum_probs=147.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++   
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   83 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSK---------VIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTS   83 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcC
Confidence            6789999999999999999999999999         99999876532211   12346889999999999888775   


Q ss_pred             CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      ++|++||+||......   ....+....+++|+.++.++++++..    .+..  +||++||...+..            
T Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~------------  149 (249)
T 3f9i_A           84 NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYG--RIINISSIVGIAG------------  149 (249)
T ss_dssp             CCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCCCC--C------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--EEEEEccHHhccC------------
Confidence            6899999999764321   22344566799999999988887743    4455  8999999765532            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                         ..+...|+.+|++.+.+.+.++.++   ++++..++++.+ ..+......  ..............+.+++|+|+++
T Consensus       150 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~  224 (249)
T 3f9i_A          150 ---NPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE--KQREAIVQKIPLGTYGIPEDVAYAV  224 (249)
T ss_dssp             ---CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH--HHHHHHHHHCTTCSCBCHHHHHHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH--HHHHHHHhcCCCCCCcCHHHHHHHH
Confidence               1235679999999999999988774   788877765543 211111000  0000001111234578899999999


Q ss_pred             HHHHhcC----CCCcEEecCCCc
Q 044498          245 LRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       245 ~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ..++...    .++.+++.+|..
T Consensus       225 ~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          225 AFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHcCCccCCccCcEEEECCCEe
Confidence            9999653    488999988754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.84  E-value=3.6e-20  Score=165.30  Aligned_cols=211  Identities=13%  Similarity=0.023  Sum_probs=150.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++   
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   76 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAK---------VVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAV   76 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999876432211   11236789999999998888775   


Q ss_pred             ----CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||.......   ...+....+++|+.++.++++++    ++.+..  +||++||...+...       
T Consensus        77 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~-------  147 (260)
T 1nff_A           77 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG--SIINISSIEGLAGT-------  147 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC-------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--EEEEEeehhhcCCC-------
Confidence                79999999997642211   12233456889999986555554    455666  99999998765421       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                              .+...|+.+|...+.+.+.++.+   .++++.+++++.+..-+.. .. ...+  .  ......+.+++|+|
T Consensus       148 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~-~~~~--~--~~~~~~~~~~~dvA  213 (260)
T 1nff_A          148 --------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV-PEDI--F--QTALGRAAEPVEVS  213 (260)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS-CTTC--S--CCSSSSCBCHHHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc-hhhH--H--hCccCCCCCHHHHH
Confidence                    23457999999999999998877   4889988876544211111 11 1111  0  11223578899999


Q ss_pred             HHHHHHHhcC----CCCcEEecCCCcc
Q 044498          242 EGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       242 ~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      +++..++...    .++.|++.+|...
T Consensus       214 ~~v~~l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          214 NLVVYLASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCccccCCcCCEEEECCCeec
Confidence            9999998652    4789999888643

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.84  E-value=2e-21  Score=173.74  Aligned_cols=213  Identities=10%  Similarity=-0.028  Sum_probs=151.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|++|.+++.+++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   83 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGAN---------VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTI   83 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEE---------EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe---------EEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHH
Confidence            5678999999999999999999999999         99999865432110       1234688999999998887765


Q ss_pred             c-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       .+|++||+||.........   .+....+++|+.++.++++++...    + ..  +||++||...+.....
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~--~iv~~sS~~~~~~~~~  161 (265)
T 1h5q_A           84 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKG--SIVVTSSMSSQIINQS  161 (265)
T ss_dssp             HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCGGGTSCCEE
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCc--eEEEeCCchhhccccc
Confidence            4       4899999999754321111   223445889999999999987653    2 35  8999999876543211


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGD  227 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~  227 (366)
                      ..        .+..|...|+.+|++.+.+++.++.++   ++++.++++..+         ..+...... ..       
T Consensus       162 ~~--------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~-------  225 (265)
T 1h5q_A          162 SL--------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQAS-NI-------  225 (265)
T ss_dssp             ET--------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHH-TC-------
T ss_pred             cc--------cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHh-cC-------
Confidence            00        133457789999999999999988775   788888865432         111111111 11       


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                        ....+.+++|+|++++.++..+    .++.|++.+|..
T Consensus       226 --~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          226 --PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             --TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             --cccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence              1234788999999999998652    578999988764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.84  E-value=3.5e-20  Score=165.43  Aligned_cols=216  Identities=13%  Similarity=0.034  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc-cccc------c-cccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE-HMME------D-MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-~~~~------~-~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+... ....      . ...+.++.+|++|.+++.++
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   73 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGAD---------IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGL   73 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCE---------EEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHH
Confidence            5678999999999999999999999999         9999987654 2111      0 23467889999999988877


Q ss_pred             hc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||........   ..+.+..+++|+.++.++++++.+    .+..  +||++||...+..   
T Consensus        74 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  148 (260)
T 1x1t_A           74 VDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG--RIINIASAHGLVA---  148 (260)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC---
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEECcHHhCcC---
Confidence            64       799999999975422111   223345688999999988887753    4555  9999999766532   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC-----C----CCeEEe-
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS-----T----DNFEMW-  225 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~-----~----~~~~i~-  225 (366)
                                  ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+.......     +    ...... 
T Consensus       149 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T 1x1t_A          149 ------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL  216 (260)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CH
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHh
Confidence                        1235679999999999999988875   788888865533 2222111100     0    000000 


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ........+.+++|+|++++.++...    .++++++.+|..
T Consensus       217 ~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          217 SEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            00112245789999999999998642    578899988753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.84  E-value=5.7e-21  Score=169.15  Aligned_cols=208  Identities=12%  Similarity=0.070  Sum_probs=151.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.+++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGAT---------VVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFF   73 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999         9999987643221      11235688999999999887765


Q ss_pred             c-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||.......   ...+....+++|+.++.++++++..    .+..  ++|++||...+..    
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~----  147 (247)
T 3lyl_A           74 AEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWG--RIISIGSVVGSAG----  147 (247)
T ss_dssp             HHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCTHHHHC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe--EEEEEcchhhccC----
Confidence            4       58999999997643221   2223345688999999998887654    3445  8999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~  228 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   ++++..++++.+         ..... ...         ..
T Consensus       148 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~---------~~  206 (247)
T 3lyl_A          148 -----------NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKS-FIA---------TK  206 (247)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHH-HHH---------TT
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHH-HHh---------hc
Confidence                       2235679999999999999988874   788877754433         11111 111         12


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .....+.+++|+|+++..++...    .++++++.+|..+
T Consensus       207 ~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          207 IPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             STTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            22345789999999999998653    5899999888654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.83  E-value=1.4e-19  Score=160.45  Aligned_cols=213  Identities=16%  Similarity=0.069  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC-ccccc---cccccceEEEccCCChhHHHhhh---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK-NEHMM---EDMFCHEFHLVDLRVMDNCLRMT---   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~-~~~~~---~~~~~v~~~~~D~~~~~~l~~~~---   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+. .....   .....+.++.+|+++.+++.+++   
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGAD---------IAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQV   76 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999987 32111   11234678999999999887765   


Q ss_pred             ----cCCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHH----HHHcCCCceeEEEEecccccCCCCCCCCC
Q 044498           95 ----SGVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEA----ARMNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        95 ----~~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                          .++|++||+||.........   .+....+++|+.++.+++++    +++.+..  +||++||...+...      
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~------  148 (249)
T 2ew8_A           77 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG--RIINLTSTTYWLKI------  148 (249)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGGSCC------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe--EEEEEcchhhccCC------
Confidence                37999999999764322212   22345688999998877777    4455666  99999998765421      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHH-HHHhCCCCeEEecCC-cceeeeeeH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSR-KAVTSTDNFEMWGDG-KQTRSLTFI  237 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~-~~~~~~~~~~i~~~~-~~~~~~i~v  237 (366)
                               .+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+.. ........  ....- .....+.++
T Consensus       149 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~p  217 (249)
T 2ew8_A          149 ---------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFD--VLPNMLQAIPRLQVP  217 (249)
T ss_dssp             ---------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTTSSSCSCCCT
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhh--HHHHhhCccCCCCCH
Confidence                     235679999999999999988875   788888876654 22222 11100000  00000 122347899


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|+|++++.++...    .++.+++.+|.
T Consensus       218 ~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          218 LDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            99999999998642    57889988774

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.83  E-value=1.4e-20  Score=169.00  Aligned_cols=205  Identities=17%  Similarity=0.050  Sum_probs=152.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++   
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGAR---------VVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999         99999987543221   12356889999999998887765   


Q ss_pred             ----CCCEEEEcccccCC-cc----ccccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGG-MG----FIQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~-~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                          ++|++||+||.... ..    ....+.+..+++|+.++.++++++    ++.+..  +||++||...+..      
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~~~~------  152 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGG--AIVNISSATAHAA------  152 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEEEECCGGGTSB------
T ss_pred             HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEECCHHHcCC------
Confidence                79999999997632 11    112233456889999999999988    556666  9999999765432      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH----------HHHHHHHHhCCCCeEEecCCc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP----------AAFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~----------~~~~~~~~~~~~~~~i~~~~~  229 (366)
                               ..+...|+.+|...+.+.+.++.+   +++++..++++.+          ..+...+.. .         .
T Consensus       153 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~-~---------~  213 (271)
T 3tzq_B          153 ---------YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFAT-H---------H  213 (271)
T ss_dssp             ---------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHT-T---------S
T ss_pred             ---------CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHh-c---------C
Confidence                     234568999999999999999888   5788887754432          111222221 1         1


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ....+...+|+|+++..++...    .++++++.+|.
T Consensus       214 ~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          214 LAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            1223678999999999998653    58899998884

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.83  E-value=3.5e-21  Score=171.67  Aligned_cols=208  Identities=16%  Similarity=0.049  Sum_probs=149.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCccccc------cccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++++|||||+|+||++++++|+++|++         |+++ +|+......      .....+.++.+|++|.+++.++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~---------vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYN---------IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEM   72 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            45689999999999999999999999999         8886 665432111      1123568999999999988776


Q ss_pred             hc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||..........+   .+..+++|+.++.++++++..    .+..  +||++||...+.    
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~----  146 (258)
T 3oid_A           73 FQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGG--HIVSISSLGSIR----  146 (258)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE--EEEEEEEGGGTS----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEECchhhCC----
Confidence            64       689999999965432222222   344588999999999888843    4445  899999976542    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEe
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~  225 (366)
                                 +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+           ..+...... .      
T Consensus       147 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~------  208 (258)
T 3oid_A          147 -----------YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQ-N------  208 (258)
T ss_dssp             -----------BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHH-H------
T ss_pred             -----------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHh-c------
Confidence                       22345689999999999999998886   677777754432           111222221 1      


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                         .....+..++|+|++++.++...    .++++++.+|...
T Consensus       209 ---~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          209 ---TPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             ---CTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             ---CCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence               11234678999999999998653    5889999988643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.83  E-value=4.5e-21  Score=172.21  Aligned_cols=218  Identities=12%  Similarity=0.045  Sum_probs=150.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~   95 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGAR---------ILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFA   95 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            5689999999999999999999999999         9999987643211      112356888999999998887765


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|++||+||..........   +....+++|+.++.++++++..    .+..  +||++||...+.      
T Consensus        96 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iV~isS~~~~~------  167 (271)
T 4ibo_A           96 RLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYG--KIVNIGSLTSEL------  167 (271)
T ss_dssp             HHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTS------
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEccHHhCC------
Confidence                   79999999997643222222   3345689999999998777654    3555  899999965432      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                               +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+......................+..+
T Consensus       168 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  238 (271)
T 4ibo_A          168 ---------ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKP  238 (271)
T ss_dssp             ---------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCG
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCH
Confidence                     22345679999999999999988874   788877755433 11111111000000000001112346789


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      +|+|++++.++...    .++++++.+|...+
T Consensus       239 edva~~v~~L~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          239 QELVGTAVFLSASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence            99999999988642    58899999886543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.83  E-value=2e-20  Score=169.70  Aligned_cols=218  Identities=12%  Similarity=0.057  Sum_probs=156.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......       .....+.++.+|++|.+++.+++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  116 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGAN---------IAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIV  116 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5679999999999999999999999999         9999987653211       12235688999999998887766


Q ss_pred             c-------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                      +       ++|++||+||...... .   ...+....+++|+.++.++++++...-.+..+||++||...+...      
T Consensus       117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------  190 (291)
T 3ijr_A          117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN------  190 (291)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC------
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC------
Confidence            4       7999999999754221 1   222345668999999999999998752211289999998765322      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                               .+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+...... ......+........+.+++|
T Consensus       191 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~p~d  260 (291)
T 3ijr_A          191 ---------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-EKKVSQFGSNVPMQRPGQPYE  260 (291)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-HHHHHHTTTTSTTSSCBCGGG
T ss_pred             ---------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-HHHHHHHHccCCCCCCcCHHH
Confidence                     234679999999999999998876   788888865533 222222111 000111122233455788999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      +|++++.++...    .++++++.+|..+
T Consensus       261 vA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          261 LAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             THHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             HHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence            999999998653    5889999887643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.83  E-value=4.3e-20  Score=165.89  Aligned_cols=217  Identities=15%  Similarity=0.044  Sum_probs=151.1

Q ss_pred             CCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHH
Q 044498           18 HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l   90 (366)
                      .|..++++||||||+|+||++++++|+++|++         |++++|.......       .....+.++.+|+++.+++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   94 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLK---------VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDF   94 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            34346689999999999999999999999999         9999986543211       1223568999999999888


Q ss_pred             Hhhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCC
Q 044498           91 LRMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        91 ~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~  156 (366)
                      .++++       ++|++||+||.........   .+....+++|+.++.++++++..    .+..  ++|++||...+. 
T Consensus        95 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~-  171 (271)
T 4iin_A           95 IEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFG--SVVNVASIIGER-  171 (271)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHH-
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC--EEEEEechhhcC-
Confidence            77764       7999999999765322222   23345688999999888877654    3555  899999975542 


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCccee
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                                    +..+...|+.+|.+.+.+.+.++.+   .++++..+.++.+ ..+......  .............
T Consensus       172 --------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~  235 (271)
T 4iin_A          172 --------------GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD--ELKADYVKNIPLN  235 (271)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTC
T ss_pred             --------------CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH--HHHHHHHhcCCcC
Confidence                          2234568999999999999998887   4778777755433 112111111  1111111222334


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+..++|+|+++..++...    .++++++.+|.
T Consensus       236 ~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          236 RLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            5789999999999998653    58899998875

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.83  E-value=1.3e-20  Score=170.50  Aligned_cols=205  Identities=14%  Similarity=0.054  Sum_probs=146.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||+++++.|+++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~  113 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSH---------VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVIN  113 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSE---------EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCE---------EEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9998876543211      112346789999999998887763


Q ss_pred             -------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|+|||+||.......   ...+....+++|+.++.++++++.    +.+..  +||++||...+...    
T Consensus       114 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~~----  187 (285)
T 2c07_A          114 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG--RIINISSIVGLTGN----  187 (285)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE--EEEEECCTHHHHCC----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC--EEEEECChhhccCC----
Confidence                   69999999997642211   122335568899999877777765    44566  99999997554221    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH--------HHHHHhCCCCeEEecCCc
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF--------SRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~--------~~~~~~~~~~~~i~~~~~  229 (366)
                                 .+...|+.+|.+.+.+.+.++.++   ++++.+++++.+ ..+        ...... .         .
T Consensus       188 -----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~---------~  246 (285)
T 2c07_A          188 -----------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIIS-N---------I  246 (285)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHT-T---------C
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHh-h---------C
Confidence                       234579999999999999988775   788888865533 111        111111 1         1


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ....+++++|+|++++.++..+    .++.+++.+|.
T Consensus       247 ~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          247 PAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            1124789999999999998652    57889998774

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.83  E-value=3.4e-20  Score=167.19  Aligned_cols=217  Identities=14%  Similarity=0.042  Sum_probs=152.3

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      |.+++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   91 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA---------VYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAA   91 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            346678999999999999999999999999         9999987643211      1233568899999999988776


Q ss_pred             hc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH------cCCCceeEEEEecccccCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM------NGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~------~~~~~~r~I~~SS~~vyg~~  157 (366)
                      ++       ++|++||+||..........+   ....+++|+.++.++++++..      .+..  +||++||...+.. 
T Consensus        92 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g--~iV~isS~~~~~~-  168 (279)
T 3sju_A           92 VAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWG--RIVNIASTGGKQG-  168 (279)
T ss_dssp             HHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCE--EEEEECCGGGTSC-
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCc--EEEEECChhhccC-
Confidence            54       689999999976532222222   244578999999999998765      4455  8999999765422 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCC---------eEE
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDN---------FEM  224 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~---------~~i  224 (366)
                                    ..+...|+.+|.+.+.+.+.++.+   .++++..+.++.+ ..+..........         ...
T Consensus       169 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  234 (279)
T 3sju_A          169 --------------VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHER  234 (279)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHH
T ss_pred             --------------CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHH
Confidence                          223567999999999999999887   4788887766543 3333332221000         000


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +........+..++|+|+++..++...    .++++++.+|.
T Consensus       235 ~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          235 FNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            112223345788999999999998653    58899998875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.83  E-value=4.7e-20  Score=167.32  Aligned_cols=208  Identities=11%  Similarity=-0.016  Sum_probs=150.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------cc-ccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DM-FCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~-~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......      .. ..+.++.+|++|.+++.+++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~  110 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGAN---------VAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA  110 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence            5678999999999999999999999999         99999886543211      11 35688999999998877765


Q ss_pred             c-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||.........   .+....+++|+.++.++++++.    +.+..  +||++||...+.  .  
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~iV~isS~~~~~--~--  184 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRG--RVILTSSITGPV--T--  184 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSC--EEEEECCSBTTT--B--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEEeChhhcc--C--
Confidence            3       6899999999764322222   2334568999999999999873    55666  999999965320  0  


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HH--------HHHHHHhCCCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AA--------FSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~--------~~~~~~~~~~~~~i~~~~  228 (366)
                                +..+...|+.+|...+.+.+.++.++   |+++..++++.+ ..        +...+.. ..+       
T Consensus       185 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~p-------  246 (293)
T 3rih_A          185 ----------GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMAR-SIP-------  246 (293)
T ss_dssp             ----------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHT-TST-------
T ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHh-cCC-------
Confidence                      12235689999999999999988874   788888866543 11        1222221 111       


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                        ...+...+|+|+++..++...    .++++++.+|..+
T Consensus       247 --~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          247 --MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             --CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence              123567999999999998542    5889999988654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.83  E-value=7.3e-21  Score=168.08  Aligned_cols=204  Identities=13%  Similarity=0.064  Sum_probs=143.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCcccccc------ccccceE-EEccCCChhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMME------DMFCHEF-HLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~~------~~~~v~~-~~~D~~~~~~l~~~~   94 (366)
                      |++||||||+|+||++++++|+++|++         |+++ +|+.......      ....+.. +.+|+++.+++.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~---------v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   71 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFA---------LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALV   71 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCE---------EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Confidence            468999999999999999999999999         9988 6764322110      1123456 899999998887765


Q ss_pred             c-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHH----HHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDM----LEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~l----l~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|+|||+||.......   ...+....+++|+.++.++    ++.+++.+.+  +||++||...+...   
T Consensus        72 ~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~~---  146 (245)
T 2ph3_A           72 HQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFG--RIVNITSVVGILGN---  146 (245)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCTHHHHCC---
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC--EEEEEeChhhccCC---
Confidence            3       79999999997542111   1223345688999995554    4555556667  99999997543211   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHH--------HHHHhCCCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFS--------RKAVTSTDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~--------~~~~~~~~~~~i~~~~  228 (366)
                                  .+...|+.+|...+.+.+.++.++   ++++.++++..+ ..+.        ..... .         
T Consensus       147 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~---------  204 (245)
T 2ph3_A          147 ------------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLK-Q---------  204 (245)
T ss_dssp             ------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHH-T---------
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHh-c---------
Confidence                        124579999999999999988775   788888876543 1111        11111 1         


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .....+++++|+|+++..++..+    .++.|++.+|.
T Consensus       205 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          205 IPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            11235789999999999998653    47889998764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.83  E-value=1e-19  Score=163.92  Aligned_cols=217  Identities=15%  Similarity=0.053  Sum_probs=152.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc-----------ccc-------ccccccceEEEcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN-----------EHM-------MEDMFCHEFHLVD   83 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~-----------~~~-------~~~~~~v~~~~~D   83 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|...           ...       ......+.++.+|
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   82 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGAD---------IIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQAD   82 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe---------EEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCC
Confidence            6789999999999999999999999999         999988632           000       1112356899999


Q ss_pred             CCChhHHHhhhc-------CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecc
Q 044498           84 LRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSA  151 (366)
Q Consensus        84 ~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~  151 (366)
                      ++|.+++.++++       ++|++||+||..... ....+....+++|+.++.++++++...    + ..  +||++||.
T Consensus        83 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g--~iv~isS~  159 (278)
T 3sx2_A           83 VRDRESLSAALQAGLDELGRLDIVVANAGIAPMS-AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGG--SIVLISSS  159 (278)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCS-STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE--EEEEECCG
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc--EEEEEccH
Confidence            999998887765       799999999976432 233445667999999999999987542    2 34  89999997


Q ss_pred             cccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH----------HHHHHHHHhC
Q 044498          152 CIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP----------AAFSRKAVTS  218 (366)
Q Consensus       152 ~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~----------~~~~~~~~~~  218 (366)
                      ..+.....           +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+          ..++......
T Consensus       160 ~~~~~~~~-----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  228 (278)
T 3sx2_A          160 AGLAGVGS-----------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAA  228 (278)
T ss_dssp             GGTSCCCC-----------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHH
T ss_pred             HhcCCCcc-----------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccch
Confidence            65432211           11235679999999999999988876   578877754322          1122111111


Q ss_pred             CCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          219 TDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       219 ~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .......+.... ..+..++|+|++++.++...    .++++++.+|.
T Consensus       229 ~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          229 TDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             CC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            121112233333 56889999999999998642    58899998875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.83  E-value=1.1e-19  Score=161.99  Aligned_cols=216  Identities=14%  Similarity=0.077  Sum_probs=151.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc--ccc------cccccceEEEccCCChhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE--HMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~--~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++|||||+|+||++++++|+++|++         |++++|+...  ...      .....+.++.+|+++.+++.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   72 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFD---------IAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAI   72 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE---------EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            478999999999999999999999999         9999987654  111      01234678999999999888776


Q ss_pred             c-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----CC-CceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----GV-MSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~~-~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       ++|++||+||.........   .+....+++|+.++.++++++.+.    +. .  +||++||...+..   
T Consensus        73 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  147 (258)
T 3a28_C           73 DEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKG--KIINAASIAAIQG---  147 (258)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCC--EEEEECCGGGTSC---
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCc--EEEEECcchhccC---
Confidence            4       7999999999754322212   233456889999999998888753    55 6  9999999765432   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh------CC--CC-eEEec
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT------ST--DN-FEMWG  226 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~------~~--~~-~~i~~  226 (366)
                                  ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+......      ..  .. ...+.
T Consensus       148 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (258)
T 3a28_C          148 ------------FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYS  215 (258)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHH
Confidence                        1235679999999999999988765   788888876543 222222110      00  00 00001


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .......+...+|+|+++..++...    .++.+++.+|..+
T Consensus       216 ~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          216 SSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             hcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            1112234789999999999998653    5788999887543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.83  E-value=9.1e-20  Score=162.75  Aligned_cols=224  Identities=13%  Similarity=-0.023  Sum_probs=150.2

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      |..+++++|||||+|+||++++++|+++|++         |++++|+......   .....+.++.+|+++.+++.++++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAK---------VVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVE   75 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Confidence            3346789999999999999999999999999         9999988653221   112346899999999998877664


Q ss_pred             -------CCCEEEEcccccCCccc----cccCcchhhhhhHHHHHHHHHHHHHcCCC------ceeEEEEecccccCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF----IQSNHSVIMYKNTTISFDMLEAARMNGVM------SLTFFFVSSACIYPEFK  158 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~~~------~~r~I~~SS~~vyg~~~  158 (366)
                             ++|++||+||.......    ...+....+++|+.++.++++++...-.+      ..++|++||...+..  
T Consensus        76 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--  153 (261)
T 3n74_A           76 AALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP--  153 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC--
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC--
Confidence                   78999999997642211    11233446889999988888877543110      126999999755422  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC--CCCeEEecCCccee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS--TDNFEMWGDGKQTR  232 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~--~~~~~i~~~~~~~~  232 (366)
                                   ..+...|+.+|++.+.+.+.++.++   ++++..+.+..+ ..+.......  ..............
T Consensus       154 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 3n74_A          154 -------------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMG  220 (261)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTS
T ss_pred             -------------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcC
Confidence                         2235579999999999999998874   788877766543 2222222110  01111112223345


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      .+.+++|+|+++..++...    .++++++.+|..++-
T Consensus       221 ~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          221 RLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             CCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            6889999999999998542    589999999876654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=1.6e-20  Score=170.82  Aligned_cols=233  Identities=13%  Similarity=0.045  Sum_probs=157.8

Q ss_pred             ccccCCCCCC-CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccc---cceEEE
Q 044498           12 KLERESHWPS-GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMF---CHEFHL   81 (366)
Q Consensus        12 ~~~~~~~~~~-~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~---~v~~~~   81 (366)
                      .+.....||. +++++|||||+|+||++++++|+++|++         |++++|+.......      ...   .+.++.
T Consensus        14 ~~~~~~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~   84 (297)
T 1xhl_A           14 LVPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQ---------VTITGRNEDRLEETKQQILKAGVPAEKINAVV   84 (297)
T ss_dssp             ---------CCTTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             cccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCCCceEEEEe
Confidence            3445555553 5678999999999999999999999999         99999876432111      011   468899


Q ss_pred             ccCCChhHHHhhhc-------CCCEEEEcccccCCcc--cc---ccCcchhhhhhHHHHHHHHHHHHH----cCCCceeE
Q 044498           82 VDLRVMDNCLRMTS-------GVDNMSNLAADMGGMG--FI---QSNHSVIMYKNTTISFDMLEAARM----NGVMSLTF  145 (366)
Q Consensus        82 ~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~--~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~  145 (366)
                      +|+++.+++.++++       ++|++||+||......  ..   ..+....+++|+.++.++++++..    .+ .  +|
T Consensus        85 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g--~I  161 (297)
T 1xhl_A           85 ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-G--EI  161 (297)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C--EE
T ss_pred             cCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C--EE
Confidence            99999998887764       7999999999754211  11   122345688999999988888765    34 5  89


Q ss_pred             EEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHH-------
Q 044498          146 FFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRK-------  214 (366)
Q Consensus       146 I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~-------  214 (366)
                      |++||...+...              ..+...|+.+|...+.+.+.++.+   .++++.+++++.+ ..+...       
T Consensus       162 V~isS~~~~~~~--------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~  227 (297)
T 1xhl_A          162 VNVSSIVAGPQA--------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETA  227 (297)
T ss_dssp             EEECCGGGSSSC--------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHH
T ss_pred             EEEcCchhccCC--------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccccccc
Confidence            999997665321              023457999999999999988865   4899988866543 111111       


Q ss_pred             ------HHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCcEEecCCCcccHHHHHHHHHHh
Q 044498          215 ------AVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREPLNIGSDEMVSINEMAEIILSF  276 (366)
Q Consensus       215 ------~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~~~~s~~el~~~i~~~  276 (366)
                            .....      ........+..++|+|++++.++...     .++.+++.+|..+.+.+.+..+.++
T Consensus       228 ~~~~~~~~~~~------~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          228 SDKLYSFIGSR------KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             HHHHHHHHHHC------TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             ccchHHHHHHH------HhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence                  11100      01111234788999999999998532     5889999998877766655555444

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.83  E-value=1.4e-19  Score=162.11  Aligned_cols=218  Identities=15%  Similarity=0.054  Sum_probs=150.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------c--cccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------D--MFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~--~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      .  ...+.++.+|+++.+++.++
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   82 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAK---------LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY   82 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHH
Confidence            5678999999999999999999999999         99999876432111      0  23467899999999988877


Q ss_pred             hc-------CCCEEEEcccccCC-cccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCC
Q 044498           94 TS-------GVDNMSNLAADMGG-MGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~-~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      ++       ++|++||+||.... ....   ..+.+..+++|+.++.++.+++    ++.+..  +||++||...+..  
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~--  158 (267)
T 1iy8_A           83 VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG--MVVNTASVGGIRG--  158 (267)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSB--
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC--EEEEEcchhhccC--
Confidence            64       78999999997542 1111   1233456889998877655544    455666  9999999765421  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHH--HhCCCCeE----EecCC
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKA--VTSTDNFE----MWGDG  228 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~--~~~~~~~~----i~~~~  228 (366)
                                   ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+....  ........    .....
T Consensus       159 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 1iy8_A          159 -------------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV  225 (267)
T ss_dssp             -------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc
Confidence                         1235679999999999999888764   799988876644 2332221  10011000    01111


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      .....+...+|+|++++.++..+    .++.+++.+|..++
T Consensus       226 ~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          226 NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             CCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            12234789999999999998653    57889998886543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.83  E-value=1.4e-19  Score=158.83  Aligned_cols=192  Identities=15%  Similarity=-0.017  Sum_probs=134.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhc----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......  ...++.++.+|+++.+++.++++    
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYR---------VGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEE   74 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999         99999875432111  11156899999999988877654    


Q ss_pred             ---CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHH----HHHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 ---GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEA----ARMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                         ++|++||+||........   ..+....+++|+.++.+++++    +++.+.+  +||++||...+..         
T Consensus        75 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~--~iv~isS~~~~~~---------  143 (234)
T 2ehd_A           75 AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGG--TIVNVGSLAGKNP---------  143 (234)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE--EEEEECCTTTTSC---------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc--EEEEECCchhcCC---------
Confidence               789999999965421111   123345688999998755554    4555666  9999999765532         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                            ..+...|+.+|...+.+.+.++.+   .++++.+++++.+..-+....    +    .   . ..++..+|+|+
T Consensus       144 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~----~---~-~~~~~~~dvA~  205 (234)
T 2ehd_A          144 ------FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P----G---Q-AWKLKPEDVAQ  205 (234)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------CCHHHHHH
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c----c---c-cCCCCHHHHHH
Confidence                  233568999999999998888776   478999998775532111100    0    0   0 11578999999


Q ss_pred             HHHHHHhcC
Q 044498          243 GVLRLIKSD  251 (366)
Q Consensus       243 ~~~~~l~~~  251 (366)
                      ++..++..+
T Consensus       206 ~~~~l~~~~  214 (234)
T 2ehd_A          206 AVLFALEMP  214 (234)
T ss_dssp             HHHHHHHSC
T ss_pred             HHHHHhCCC
Confidence            999999765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.83  E-value=4.8e-20  Score=165.09  Aligned_cols=218  Identities=15%  Similarity=0.064  Sum_probs=146.6

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHH
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~   91 (366)
                      ||.+++++|||||+|+||++++++|+++|++         |++.++.......       .....+.++.+|+++.+++.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~---------Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   93 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFT---------VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVR   93 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCE---------EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            4445678999999999999999999999999         8887554432211       11234678999999999888


Q ss_pred             hhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCC
Q 044498           92 RMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        92 ~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      ++++       ++|++||+||..........+   .+..+++|+.++.++++++.+.-.+..++|++||...+..     
T Consensus        94 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  168 (267)
T 3u5t_A           94 RLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL-----  168 (267)
T ss_dssp             HHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC-----
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC-----
Confidence            7764       799999999976432222222   2445779999999999988764211128999999765432     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+...... ......+........+..+
T Consensus       169 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~p  237 (267)
T 3u5t_A          169 ----------HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS-DEVRDRFAKLAPLERLGTP  237 (267)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCH
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC-HHHHHHHHhcCCCCCCcCH
Confidence                      1235679999999999999999886   688877765543 222221111 1111111122233457789


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      +|+|+++..++...    .++++++.+|
T Consensus       238 edvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          238 QDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             HHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            99999999998653    5788888776

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.83  E-value=5.1e-20  Score=164.91  Aligned_cols=217  Identities=14%  Similarity=0.048  Sum_probs=152.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|++|.+++.+++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   89 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGAR---------LVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELA   89 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            5689999999999999999999999999         99999975432111       2235689999999998877765


Q ss_pred             c-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       ++|++||+||..........+   ....+++|+.++.++++++...    + ..  ++|++||...+..   
T Consensus        90 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  164 (266)
T 4egf_A           90 RRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGG--AIITVASAAALAP---  164 (266)
T ss_dssp             HHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--EEEEECCGGGTSC---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCe--EEEEEcchhhccC---
Confidence            4       799999999976532222222   3445889999999988887543    2 33  8999999765532   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                  ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+......................+.
T Consensus       165 ------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~  232 (266)
T 4egf_A          165 ------------LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFA  232 (266)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCB
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCc
Confidence                        2335679999999999999988875   788888866543 222222211000000001111223467


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .++|+|++++.++...    .++++++.+|..+
T Consensus       233 ~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          233 VPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            8999999999998652    5889999988654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.83  E-value=2.3e-20  Score=167.46  Aligned_cols=216  Identities=11%  Similarity=0.041  Sum_probs=152.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   97 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAM---------VIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVE   97 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHH
Confidence            5578999999999999999999999999         9999987643211      112346889999999998887764


Q ss_pred             -------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|++||+||.......   ...+.+..+++|+.++.++++++..    .+..  +||++||...+..     
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~-----  170 (270)
T 3ftp_A           98 STLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG--RIVNITSVVGSAG-----  170 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHHC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC--EEEEECchhhCCC-----
Confidence                   79999999997643222   1223345688999999999988753    3444  8999999755422     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                ..+...|+.+|.+.+.+.+.++.++   ++++..++++.+ ..+......  ..............+.++
T Consensus       171 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~p~~r~~~p  238 (270)
T 3ftp_A          171 ----------NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQ--EQQTALKTQIPLGRLGSP  238 (270)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCH--HHHHHHHTTCTTCSCBCH
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCH--HHHHHHHhcCCCCCCCCH
Confidence                      1235679999999999999988874   788888866544 222211100  000000111223457889


Q ss_pred             HHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          238 DECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       238 ~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      +|+|+++..++...    .++++++.+|..+|
T Consensus       239 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          239 EDIAHAVAFLASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence            99999999998542    58999999886543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.83  E-value=2.5e-20  Score=164.62  Aligned_cols=212  Identities=14%  Similarity=-0.036  Sum_probs=146.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++||||||+|+||++++++|+++|++         |+++ +|+......      .....+.++.+|+++.+++.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~---------v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   71 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCK---------VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHH
Confidence            368999999999999999999999999         9885 665432111      012346789999999998887765


Q ss_pred             -------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|+|||+||.......   ...+....+++|+.++.++++++.+.    +..  +||++||...+..     
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~~sS~~~~~~-----  144 (244)
T 1edo_A           72 TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG--RIINIASVVGLIG-----  144 (244)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCTHHHHC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC--EEEEECChhhcCC-----
Confidence                   79999999997643211   12233456889999999998888653    556  9999999754321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                                ..+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+......  ..............+.++
T Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~  212 (244)
T 1edo_A          145 ----------NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE--DMEKKILGTIPLGRTGQP  212 (244)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH--HHHHHHHTSCTTCSCBCH
T ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh--HHHHHHhhcCCCCCCCCH
Confidence                      1234579999999999999888774   788888876543 111111000  000000001112347899


Q ss_pred             HHHHHHHHHHHhcC-----CCCcEEecCCC
Q 044498          238 DECVEGVLRLIKSD-----FREPLNIGSDE  262 (366)
Q Consensus       238 ~D~a~~~~~~l~~~-----~~~~~~i~~~~  262 (366)
                      +|+|+++..++..+     .++.|++.+|.
T Consensus       213 ~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          213 ENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            99999999998432     47889998774

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.83  E-value=8.9e-20  Score=162.69  Aligned_cols=222  Identities=14%  Similarity=0.007  Sum_probs=147.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |+++++......       ......+.++.+|++|.+++.+++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   77 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGAN---------VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAI   77 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            5689999999999999999999999999         998854433211       112335689999999999888776


Q ss_pred             c-------CCCEEEEcccccCCccc-ccc---CcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGF-IQS---NHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~-~~~---~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                      +       ++|++||+||....... ...   +....+++|+.++.++++++...-.+..++|++||...+..       
T Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  150 (259)
T 3edm_A           78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG-------  150 (259)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC-------
T ss_pred             HHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC-------
Confidence            4       78999999996522111 111   22456899999999999999876322238999999765511       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                             +..+...|+.+|.+.+.+.+.++.+++  +++..+.++.+ ..+...... ...............+.+++|+
T Consensus       151 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedv  222 (259)
T 3edm_A          151 -------GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDV  222 (259)
T ss_dssp             -------CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------CCBCHHHH
T ss_pred             -------CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHH
Confidence                   122356799999999999999998875  56666654433 222222221 1111111222334567889999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCCcccHH
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDEMVSIN  267 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~~~s~~  267 (366)
                      |+++..++...    .++.+++.+|...+..
T Consensus       223 a~~v~~L~s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          223 AGLVAFLASDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESBCSSBC--
T ss_pred             HHHHHHHcCccccCccCCEEEECCCcCCCCC
Confidence            99999998653    5899999888755443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.83  E-value=9.3e-20  Score=164.41  Aligned_cols=216  Identities=13%  Similarity=-0.015  Sum_probs=141.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |+++++.......       .....+.++.+|++|.+++.+++
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   98 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFD---------IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATV   98 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCe---------EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            3467999999999999999999999999         9999865432211       11235689999999998888776


Q ss_pred             c-------CCCEEEEcccccCC--ccc---cccCcchhhhhhHHHHHHHHHHHHHc----C---CCceeEEEEecccccC
Q 044498           95 S-------GVDNMSNLAADMGG--MGF---IQSNHSVIMYKNTTISFDMLEAARMN----G---VMSLTFFFVSSACIYP  155 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~--~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~---~~~~r~I~~SS~~vyg  155 (366)
                      +       ++|++||+||....  ...   ...+....+++|+.++.++++++...    +   ..  +||++||...+.
T Consensus        99 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g--~Iv~isS~~~~~  176 (280)
T 4da9_A           99 DAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASR--SIINITSVSAVM  176 (280)
T ss_dssp             HHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCE--EEEEECCC----
T ss_pred             HHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCC--EEEEEcchhhcc
Confidence            5       79999999997321  111   22334556889999999888887653    2   33  899999975542


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcce
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQT  231 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~  231 (366)
                      .               ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+...... ...-.+.......
T Consensus       177 ~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~  240 (280)
T 4da9_A          177 T---------------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG-KYDGLIESGLVPM  240 (280)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------
T ss_pred             C---------------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch-hHHHHHhhcCCCc
Confidence            1               1234679999999999999998874   678877765543 222222111 0000111112233


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ..+..++|+|+++..++...    .++++++.+|..+
T Consensus       241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          241 RRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             -CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             CCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            45788999999999998654    5889999888643

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.83  E-value=8.6e-20  Score=162.41  Aligned_cols=206  Identities=14%  Similarity=0.075  Sum_probs=148.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC-Ccccccc------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN-KNEHMME------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~-~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+ .......      ....+.++.+|+++.+++.+++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   76 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAK---------VGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLV   76 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            4578999999999999999999999999         9999997 4322110      1234688999999999888877


Q ss_pred             c-------CCCEEEEcccc-cCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C--C---CceeEEEEeccccc
Q 044498           95 S-------GVDNMSNLAAD-MGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G--V---MSLTFFFVSSACIY  154 (366)
Q Consensus        95 ~-------~~d~vi~~a~~-~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~--~---~~~r~I~~SS~~vy  154 (366)
                      +       ++|+|||+||. ........   .+....+++|+.++.++++++...    +  .   .  +||++||...+
T Consensus        77 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--~iv~~sS~~~~  154 (258)
T 3afn_B           77 DEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTS--AVISTGSIAGH  154 (258)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCE--EEEEECCTHHH
T ss_pred             HHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCc--EEEEecchhhc
Confidence            5       79999999996 32111111   123446789999999888876432    2  1   4  89999997654


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCe
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNF  222 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~  222 (366)
                      ..              +..+...|+.+|.+.+.+.+.++.++   ++++.++++..+         ..+...+.. +   
T Consensus       155 ~~--------------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~---  216 (258)
T 3afn_B          155 TG--------------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISN-G---  216 (258)
T ss_dssp             HC--------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHT-T---
T ss_pred             cC--------------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhc-c---
Confidence            31              11235689999999999999988775   888888865433         122222222 1   


Q ss_pred             EEecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCcEEecCCC
Q 044498          223 EMWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREPLNIGSDE  262 (366)
Q Consensus       223 ~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~~  262 (366)
                            .....+++++|+|+++..++...     .+++|++.+|.
T Consensus       217 ------~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          217 ------IPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             ------CTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             ------CCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence                  12245789999999999998642     47889998875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.83  E-value=1.7e-20  Score=167.91  Aligned_cols=213  Identities=13%  Similarity=0.037  Sum_probs=145.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......   .....+.++.+|++|.+++.++++   
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAI---------VGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHH
Confidence            5688999999999999999999999999         9999987643221   112356899999999998887764   


Q ss_pred             ----CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||......   ....+....+++|+.++.++.+++    ++.+..  +||++||...+..        
T Consensus        97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~Iv~isS~~~~~~--------  166 (266)
T 3grp_A           97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYG--RIINITSIVGVVG--------  166 (266)
T ss_dssp             HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCC-------------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc--EEEEECCHHHcCC--------
Confidence                7999999999764321   122234556889999966666655    445555  8999999654321        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                             ..+...|+.+|.+.+.+.+.++.++   ++++..++++.+ ..+......  ..............+...+|+
T Consensus       167 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~p~~r~~~~edv  237 (266)
T 3grp_A          167 -------NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNE--KQKEAIMAMIPMKRMGIGEEI  237 (266)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCH--HHHHHHHTTCTTCSCBCHHHH
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCH--HHHHHHHhcCCCCCCcCHHHH
Confidence                   1235679999999999999988875   788888865543 222111000  000000111223456789999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCC
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |++++.++...    .++++++.+|.
T Consensus       238 A~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          238 AFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhCccccCccCCEEEECCCe
Confidence            99999998653    58899998875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.83  E-value=5.8e-20  Score=165.19  Aligned_cols=217  Identities=13%  Similarity=0.029  Sum_probs=149.7

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++++++.+++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   89 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGAR---------VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLM   89 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            35688999999999999999999999999         9999987643211      11234678999999998887765


Q ss_pred             --------cCCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCC
Q 044498           95 --------SGVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 --------~~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                              .++|++||+||........   ..+....+++|+.++.++++++.    +.+..  +||++||...+...  
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~~~--  165 (273)
T 1ae1_A           90 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG--NVIFLSSIAGFSAL--  165 (273)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE--EEEEECCGGGTSCC--
T ss_pred             HHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEcCHhhcCCC--
Confidence                    4699999999975422111   22334557899999999998874    34555  99999998766432  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCC-CeEE---ecCCcce
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTD-NFEM---WGDGKQT  231 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~-~~~i---~~~~~~~  231 (366)
                                   .+...|+.+|.+.+.+.+.++.++   ++++..++++.+ ..+......... ....   .......
T Consensus       166 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~  232 (273)
T 1ae1_A          166 -------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM  232 (273)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT
T ss_pred             -------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC
Confidence                         235679999999999999988875   788888866543 222211110000 0000   0000112


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ..+..++|+|+++..++...    .++++++.+|..
T Consensus       233 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          233 GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence            34678999999999998542    578999988754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.82  E-value=6.2e-20  Score=163.07  Aligned_cols=209  Identities=11%  Similarity=0.029  Sum_probs=147.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.....     .+.++.+|++|++++.++++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDK---------VAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999         999998754322     25889999999988877654      


Q ss_pred             -CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       .+|++||+||......   ....+....+++|+.++.++++++.+    .+..  +||++||...+...          
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~~~~~----------  153 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKG--RVVLISSVVGLLGS----------  153 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEEEECCCCCCCCH----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEECchhhCCCC----------
Confidence             5899999999754221   12344566789999999988887654    3556  89999997543211          


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                           .+...|+.+|.+.+.+.+.++.++   ++++.+++++.+ ..+......  ..............+...+|+|++
T Consensus       154 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~p~~~~~~p~dvA~~  226 (253)
T 2nm0_A          154 -----AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD--EQRANIVSQVPLGRYARPEEIAAT  226 (253)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             -----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH--HHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 124579999999999999988875   677877766543 122111100  000000011112347899999999


Q ss_pred             HHHHHhcC----CCCcEEecCCCc
Q 044498          244 VLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       244 ~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ++.++..+    .++.+.+.+|..
T Consensus       227 i~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          227 VRFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHhCccccCCcCcEEEECCccc
Confidence            99998653    578899988754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.82  E-value=1.3e-19  Score=163.14  Aligned_cols=217  Identities=15%  Similarity=0.088  Sum_probs=154.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCH---------VLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACV   98 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999876432211   12356899999999988877654   


Q ss_pred             ----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||.........   .+....+++|+.++.++++++..    .+..  +||++||...+..        
T Consensus        99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~Iv~isS~~~~~~--------  168 (277)
T 3gvc_A           99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGG--AIVNLSSLAGQVA--------  168 (277)
T ss_dssp             HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEEEECCGGGTSC--------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEcchhhccC--------
Confidence                7999999999764322222   23345688999999988888754    4444  8999999754422        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecC------Ccceeee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGD------GKQTRSL  234 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~------~~~~~~~  234 (366)
                             ..+...|+.+|.+.+.+.+.++.+   +++++..++++.+ ..+....... ..-.....      ......+
T Consensus       169 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~  240 (277)
T 3gvc_A          169 -------VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAM-FDGALGAGGARSMIARLQGRM  240 (277)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC-C------CCHHHHHHHHHSSC
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhc-chhhHHHHhhhhhhhccccCC
Confidence                   233567999999999999988877   4788888876644 3333333221 00000000      1112357


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      ..++|+|++++.++...    .++++++.+|...+
T Consensus       241 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          241 AAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            88999999999998653    58899999887554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.82  E-value=7e-20  Score=166.42  Aligned_cols=219  Identities=14%  Similarity=0.022  Sum_probs=155.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-c-------ccccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-M-------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~-------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|..... .       ......+.++.+|++|.+++.++
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  118 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGAD---------VAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSL  118 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHH
Confidence            5678999999999999999999999999         99988763311 1       11123567889999999887776


Q ss_pred             hc-------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                      ++       ++|++||+||...... .   ...+....+++|+.++.++++++...-.+..+||++||...+...     
T Consensus       119 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~-----  193 (294)
T 3r3s_A          119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS-----  193 (294)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----
Confidence            53       7999999999754211 1   122335568999999999999998764332389999998766432     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                                .+...|+.+|...+.+.+.++.++   ++++..++++.+. .+.............+........+...+
T Consensus       194 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  263 (294)
T 3r3s_A          194 ----------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPA  263 (294)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGG
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHH
Confidence                      235679999999999999998876   8999888766542 22111000001111112223344578899


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      |+|++++.++...    .++++++.+|..+
T Consensus       264 dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          264 ELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            9999999998643    5899999988654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.82  E-value=7.2e-20  Score=162.52  Aligned_cols=203  Identities=14%  Similarity=0.083  Sum_probs=150.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......      ..+.+|++|.+++.++++      
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~---------V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWN---------TISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999         9999998754321      457889999988877654      


Q ss_pred             -CCCEEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           96 -GVDNMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                       ++|++||+||......    ....+....+++|+.++.++++++...-.+..+||++||...+..              
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------  151 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR--------------  151 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC--------------
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC--------------
Confidence             5799999999753211    122234556889999999999999875322228999999765532              


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH-----cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKD-----FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~-----~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                       ..+...|+.+|.+.+.+.+.++.+     .++++..++++.+ ..+...... .         .....++.++|+|+++
T Consensus       152 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~-~---------~~~~~~~~~~dva~~i  220 (251)
T 3orf_A          152 -TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS-D---------ANFDDWTPLSEVAEKL  220 (251)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT-T---------SCGGGSBCHHHHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc-c---------ccccccCCHHHHHHHH
Confidence             233567999999999999999888     4688888876644 333333322 1         1234578899999999


Q ss_pred             HHHHhc---C--CCCcEEecCCCcc
Q 044498          245 LRLIKS---D--FREPLNIGSDEMV  264 (366)
Q Consensus       245 ~~~l~~---~--~~~~~~i~~~~~~  264 (366)
                      +.++..   .  .++.+++.+++..
T Consensus       221 ~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          221 FEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHHhcCccccCCcceEEEEecCCcc
Confidence            999977   2  5788888776543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.82  E-value=4.9e-20  Score=162.91  Aligned_cols=214  Identities=14%  Similarity=0.059  Sum_probs=151.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      +|+++|||||+|+||++++++|++ .|+.         |++.+|......    ..+.++.+|+++.+++.++++     
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~---------v~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~   69 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHT---------VINIDIQQSFSA----ENLKFIKADLTKQQDITNVLDIIKNV   69 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEE---------EEEEESSCCCCC----TTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcE---------EEEecccccccc----ccceEEecCcCCHHHHHHHHHHHHhC
Confidence            567899999999999999999999 7888         999888765222    234889999999998888765     


Q ss_pred             CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                      ++|++||+||..........   +....+++|+.++.++++++...-.++.++|++||...+..               .
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------~  134 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA---------------K  134 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC---------------C
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC---------------C
Confidence            78999999997643222222   33455899999999999998775322227999999765532               2


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhC-----CC----CeEEecCCcceeeeeeHHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTS-----TD----NFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~-----~~----~~~i~~~~~~~~~~i~v~D  239 (366)
                      .+...|+.+|...+.+.+.++.+   +++++..++++.+ ..+.......     +.    .............+..++|
T Consensus       135 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  214 (244)
T 4e4y_A          135 PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQE  214 (244)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHH
Confidence            23457999999999999998875   4788888866543 2222211100     00    0000011222345788999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +|++++.++...    .++.+++.+|..
T Consensus       215 vA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          215 IAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhcCccccccCCeEeECCCcc
Confidence            999999999653    588999988754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.82  E-value=2.9e-20  Score=165.52  Aligned_cols=218  Identities=11%  Similarity=-0.024  Sum_probs=147.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc----CCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS----GVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~----~~d   98 (366)
                      |++||||||+|+||++++++|+++|++         |++++|+......      . +.+|+++.+++.++++    ++|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id   64 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQ---------IVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCC
Confidence            468999999999999999999999999         9999987653221      1 6789999998888775    459


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc-------
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES-------  167 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~-------  167 (366)
                      ++||+||....    ....+..+++|+.++.++++++.+    .+..  +||++||...+......+.  .+.       
T Consensus        65 ~lv~~Ag~~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~~~~~~~--~~~~~~~~~~  136 (257)
T 1fjh_A           65 GLVLCAGLGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQP--AAVVISSVASAHLAFDKNP--LALALEAGEE  136 (257)
T ss_dssp             EEEECCCCCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC--EEEEECCGGGGSSCGGGCT--THHHHHHTCH
T ss_pred             EEEECCCCCCC----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCc--EEEEECChhhhccccccch--hhhhhcccch
Confidence            99999996531    234677899999999999988863    4556  9999999887732211110  000       


Q ss_pred             --------cCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecC-Ccceeee
Q 044498          168 --------EAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGD-GKQTRSL  234 (366)
Q Consensus       168 --------~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~-~~~~~~~  234 (366)
                              +..+..+...|+.+|.+.+.+.+.++.+   .++++.+++++.+ ..+................ ......+
T Consensus       137 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (257)
T 1fjh_A          137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             hhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCC
Confidence                    0012224678999999999999988776   4899998876654 2222221110000000000 1112247


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .+++|+|++++.++..+    .++.+++.+|...
T Consensus       217 ~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            89999999999998653    4788998887543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.82  E-value=7e-20  Score=161.37  Aligned_cols=213  Identities=16%  Similarity=0.117  Sum_probs=146.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-------c
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-------S   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-------~   95 (366)
                      ++++|||||+|+||++++++|+++|++         |++++|+......  ..++.++.+|+++ +++.+++       .
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~---------V~~~~r~~~~~~~--~~~~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYR---------VAIASRNPEEAAQ--SLGAVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHH--HHTCEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHH--hhCcEEEecCCch-HHHHHHHHHHHHHcC
Confidence            478999999999999999999999999         9999998754211  1136889999998 6665543       3


Q ss_pred             CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      ++|++||+||.......   ...+....+++|+.++.++++++.    +.+..  ++|++||...+....          
T Consensus        70 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~~----------  137 (239)
T 2ekp_A           70 GLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG--RVLFIGSVTTFTAGG----------  137 (239)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCCT----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEECchhhccCCC----------
Confidence            79999999997542211   122345568899999988888774    34566  999999987664321          


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                         ..+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+......................+...+|+|+++
T Consensus       138 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  214 (239)
T 2ekp_A          138 ---PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVA  214 (239)
T ss_dssp             ---TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence               1345689999999999999988875   788888866533 111111100000000000011123467899999999


Q ss_pred             HHHHhcC----CCCcEEecCCC
Q 044498          245 LRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       245 ~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..++...    .++.+++.+|.
T Consensus       215 ~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          215 AVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHcCchhcCCCCCEEEECCCc
Confidence            9998642    57888888764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.82  E-value=2.7e-19  Score=161.48  Aligned_cols=218  Identities=16%  Similarity=0.027  Sum_probs=152.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-----------c-------ccccccceEEEcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-----------M-------MEDMFCHEFHLVD   83 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-----------~-------~~~~~~v~~~~~D   83 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+....           .       ......+.++.+|
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGAD---------IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVD   79 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe---------EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCC
Confidence            5689999999999999999999999999         99999864211           0       0112356789999


Q ss_pred             CCChhHHHhhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEe
Q 044498           84 LRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVS  149 (366)
Q Consensus        84 ~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~S  149 (366)
                      ++|.+++.++++       ++|++||+||.........   .+....+++|+.++.++++++.    +.+..  ++|++|
T Consensus        80 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~is  157 (281)
T 3s55_A           80 VKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG--RIVTVS  157 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEEC
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEEC
Confidence            999998887764       7999999999764322222   2334568899999999999864    34555  899999


Q ss_pred             cccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHH-----HH-HHhC-
Q 044498          150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFS-----RK-AVTS-  218 (366)
Q Consensus       150 S~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~-----~~-~~~~-  218 (366)
                      |...+..               ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+.     .. .... 
T Consensus       158 S~~~~~~---------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~  222 (281)
T 3s55_A          158 SMLGHSA---------------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDL  222 (281)
T ss_dssp             CGGGGSC---------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-----
T ss_pred             ChhhcCC---------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccc
Confidence            9765532               2335679999999999999998874   788887755432 1110     00 0000 


Q ss_pred             -CCCe-----EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          219 -TDNF-----EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       219 -~~~~-----~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                       ....     .+.........+.+++|+|++++.++...    .++++++.+|...+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          223 EKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             --CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             cccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence             0000     00001112256889999999999999753    48899999887654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.82  E-value=1.1e-19  Score=161.12  Aligned_cols=210  Identities=12%  Similarity=0.042  Sum_probs=139.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC-ChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR-VMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~-~~~~l~~~~~~~d~v  100 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......  ..+.++ +|+. +.+.+.+.+.++|++
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAE---------VTICARNEELLKRS--GHRYVV-CDLRKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEE
Confidence            6789999999999999999999999999         99999876321111  134566 9982 223333334489999


Q ss_pred             EEcccccCCcccccc---CcchhhhhhHHHHHHHH----HHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498          101 SNLAADMGGMGFIQS---NHSVIMYKNTTISFDML----EAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus       101 i~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll----~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                      ||+||..........   +....+++|+.++.++.    ..+++.+..  +||++||...|...               .
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~---------------~  148 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG--RIVAITSFSVISPI---------------E  148 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC---------------T
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEEcchHhcCCC---------------C
Confidence            999996543222222   23455788998876554    445556666  99999998776432               2


Q ss_pred             CCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeE-EecCCcceeeeeeHHHHHHHHHHHH
Q 044498          174 PQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFE-MWGDGKQTRSLTFIDECVEGVLRLI  248 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~-i~~~~~~~~~~i~v~D~a~~~~~~l  248 (366)
                      +...|+.+|.+.+.+.+.++.+   .++++..++++.+ ..+......  .... ..........+.+++|+|++++.++
T Consensus       149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~  226 (249)
T 1o5i_A          149 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS--EEKKKQVESQIPMRRMAKPEEIASVVAFLC  226 (249)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC--HHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch--hhHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            3467999999999999988876   4788888865533 111111000  0000 0000111234789999999999998


Q ss_pred             hcC----CCCcEEecCCC
Q 044498          249 KSD----FREPLNIGSDE  262 (366)
Q Consensus       249 ~~~----~~~~~~i~~~~  262 (366)
                      ...    .++.+++.+|.
T Consensus       227 s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          227 SEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CccccCCCCCEEEECCCc
Confidence            642    47889998875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.82  E-value=1.8e-20  Score=166.08  Aligned_cols=205  Identities=16%  Similarity=0.042  Sum_probs=149.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAK---------VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHH
Confidence            5688999999999999999999999999         99999876432211   12235789999999998887765   


Q ss_pred             ----CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||.........   .+....+++|+.++.++++++..    .+..  ++|++||...+.         
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~---------  147 (248)
T 3op4_A           79 DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQG--RIINVGSVVGTM---------  147 (248)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHH---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC--EEEEEcchhhcC---------
Confidence                7999999999764322222   23345688999999999988754    4555  899999965432         


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCccee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                            +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+         ......... .         ....
T Consensus       148 ------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~---------~p~~  211 (248)
T 3op4_A          148 ------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLA-Q---------VPAG  211 (248)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHH-T---------CTTC
T ss_pred             ------CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHh-c---------CCCC
Confidence                  12345679999999999999988875   688877754433         111111111 1         1223


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+.+++|+|+++..++...    .++++++.+|.
T Consensus       212 r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          212 RLGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            4778999999999998643    48899998875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.82  E-value=4e-19  Score=159.94  Aligned_cols=207  Identities=14%  Similarity=0.082  Sum_probs=148.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC-CCcccccc------c-cccceEEEccCCCh----hH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW-NKNEHMME------D-MFCHEFHLVDLRVM----DN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r-~~~~~~~~------~-~~~v~~~~~D~~~~----~~   89 (366)
                      +++++|||||+|+||++++++|+++|++         |++++| +.......      . ...+.++.+|+++.    ++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   80 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFR---------VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDC   80 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHH
Confidence            4578999999999999999999999999         999998 54321110      0 23468899999999    88


Q ss_pred             HHhhhc-------CCCEEEEcccccCCccccc--------------cCcchhhhhhHHHHHHHHHHHHHc---CC-----
Q 044498           90 CLRMTS-------GVDNMSNLAADMGGMGFIQ--------------SNHSVIMYKNTTISFDMLEAARMN---GV-----  140 (366)
Q Consensus        90 l~~~~~-------~~d~vi~~a~~~~~~~~~~--------------~~~~~~~~~nv~~~~~ll~a~~~~---~~-----  140 (366)
                      +.++++       ++|++||+||.........              .+....+++|+.++.++++++...   +.     
T Consensus        81 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  160 (276)
T 1mxh_A           81 CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSR  160 (276)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCC
Confidence            777664       7999999999754221111              223456889999999999999874   22     


Q ss_pred             -CceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-------H
Q 044498          141 -MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-------A  209 (366)
Q Consensus       141 -~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-------~  209 (366)
                       .  +||++||...+..               ..+...|+.+|...+.+.+.++.++   ++++..++++.+       .
T Consensus       161 ~g--~iv~isS~~~~~~---------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  223 (276)
T 1mxh_A          161 NL--SVVNLCDAMTDLP---------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ  223 (276)
T ss_dssp             CE--EEEEECCGGGGSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH
T ss_pred             Cc--EEEEECchhhcCC---------------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCCccCCH
Confidence             5  8999999876532               2235679999999999999988875   788888865433       1


Q ss_pred             HHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          210 AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       210 ~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .+...... ..+        ..+++.+++|+|++++.++...    .++.+++.+|..
T Consensus       224 ~~~~~~~~-~~p--------~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          224 ETQEEYRR-KVP--------LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             HHHHHHHT-TCT--------TTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHh-cCC--------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence            22222221 111        0122788999999999998642    478899988753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.82  E-value=1.4e-19  Score=161.17  Aligned_cols=218  Identities=11%  Similarity=-0.025  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   75 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGAR---------VVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIE   75 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999987653211      112356889999999998887764


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHH-----HcCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAAR-----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~-----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||..........   +....+++|+.++.++++++.     +.+..  ++|++||...+..    
T Consensus        76 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~----  149 (257)
T 3imf_A           76 QIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKG--NIINMVATYAWDA----  149 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC--EEEEECCGGGGSC----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCc--EEEEECchhhccC----
Confidence                   79999999996543222222   234568899999999998883     33355  8999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH----cCCcEEEeCCCcHH-HHH-HHHHhCCCCeEEecCCcceeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD----FEIECRLVGEKAPA-AFS-RKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~----~~~~~~i~r~~~~~-~~~-~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                 ..+...|+.+|...+.+.+.++.+    +++++..++++.+. ... .....................+
T Consensus       150 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~  218 (257)
T 3imf_A          150 -----------GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRL  218 (257)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSC
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCC
Confidence                       223567999999999998887754    37998888654331 000 0000000000000111122347


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      ..++|+|++++.++...    .++.+++.+|..++
T Consensus       219 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          219 GTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            88999999999998653    58899999887554

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.82  E-value=1.4e-19  Score=161.07  Aligned_cols=215  Identities=16%  Similarity=0.050  Sum_probs=148.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|++|.+++.++++ 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   72 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFA---------VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ   72 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999         99999875432111      12246789999999998887765 


Q ss_pred             ------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                            ++|++||+||.........   .+.+..+++|+.++.++++++.+    .+ ..  ++|++||...+..     
T Consensus        73 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~-----  145 (256)
T 1geg_A           73 ARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGG--KIINACSQAGHVG-----  145 (256)
T ss_dssp             HHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--EEEEECCGGGTSC-----
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC--EEEEECchhhcCC-----
Confidence                  7999999999754221222   22345688999998888777654    34 45  8999999754321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHH----h--C--CCC-eEEecCC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAV----T--S--TDN-FEMWGDG  228 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~----~--~--~~~-~~i~~~~  228 (366)
                                ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+.....    .  .  ... ...+...
T Consensus       146 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (256)
T 1geg_A          146 ----------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR  215 (256)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhc
Confidence                      1224579999999999999988764   788888876543 22222211    0  0  000 0000111


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .....+...+|+|+++..++...    .++.+++.+|..
T Consensus       216 ~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          216 ITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            12234789999999999998653    578899988754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=6.9e-20  Score=165.20  Aligned_cols=204  Identities=15%  Similarity=0.072  Sum_probs=141.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......        ....+.++.+|+++.+++.++
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~  101 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLK---------VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSM  101 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHH
Confidence            5678999999999999999999999999         99999875432111        012357889999999988776


Q ss_pred             hc-------CCCEEEEcccccCCccc---cccCcchhhhhhHHH----HHHHHHHHHHcCC--CceeEEEEecccccCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTI----SFDMLEAARMNGV--MSLTFFFVSSACIYPEF  157 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~----~~~ll~a~~~~~~--~~~r~I~~SS~~vyg~~  157 (366)
                      ++       ++|+|||+||.......   ...+....+++|+.+    +..+++.+++.+.  .  +||++||...+...
T Consensus       102 ~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g--~iv~isS~~~~~~~  179 (279)
T 1xg5_A          102 FSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDG--HIININSMSGHRVL  179 (279)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSC--EEEEECCGGGTSCC
T ss_pred             HHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCc--eEEEEcChhhcccC
Confidence            64       79999999997542211   122334568899999    7777788877775  6  99999998765421


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcce
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQT  231 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~  231 (366)
                                   +..+...|+.+|...+.+.+.++.++     ++++..++++.+ ..+...... .....+.. ....
T Consensus       180 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~-~~~~  244 (279)
T 1xg5_A          180 -------------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-KDPEKAAA-TYEQ  244 (279)
T ss_dssp             -------------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-TCHHHHHH-HHC-
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcc-cChhHHhh-hccc
Confidence                         22335679999999999988877653     688888876543 222222221 11000000 0112


Q ss_pred             eeeeeHHHHHHHHHHHHhcC
Q 044498          232 RSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~  251 (366)
                      ..+++++|+|++++.++..+
T Consensus       245 ~~~~~~~dvA~~i~~l~~~~  264 (279)
T 1xg5_A          245 MKCLKPEDVAEAVIYVLSTP  264 (279)
T ss_dssp             --CBCHHHHHHHHHHHHHSC
T ss_pred             ccCCCHHHHHHHHHHHhcCC
Confidence            24688999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.82  E-value=3.9e-19  Score=157.89  Aligned_cols=211  Identities=17%  Similarity=0.202  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccC--CChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDL--RVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~--~~~~~l~~   92 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|+  ++.+++.+
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGAT---------VILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQ   81 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHH
Confidence            6789999999999999999999999999         99999876532211       112468899999  88887776


Q ss_pred             hhc-------CCCEEEEcccccCCc-cccccC---cchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGM-GFIQSN---HSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~-~~~~~~---~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~  157 (366)
                      +++       ++|++||+||..... .....+   ....+++|+.++.++++++    ++.+..  ++|++||...+.. 
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g--~iv~isS~~~~~~-  158 (252)
T 3f1l_A           82 LAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG--SLVFTSSSVGRQG-  158 (252)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC--EEEEECCGGGTSC-
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCC--EEEEECChhhccC-
Confidence            654       799999999975321 112222   2456899999999999988    445556  8999999754421 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                    ..+...|+.+|...+.+.+.++.+++  +++..+.++.+ ..+...... ...         ...+
T Consensus       159 --------------~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~-~~~---------~~~~  214 (252)
T 3f1l_A          159 --------------RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFP-TED---------PQKL  214 (252)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCT-TCC---------GGGS
T ss_pred             --------------CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCC-ccc---------hhcc
Confidence                          22356799999999999999999875  66666665544 333333322 111         1236


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHH
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINE  268 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~e  268 (366)
                      ...+|+++++++++...    .++.+++.+|...++.|
T Consensus       215 ~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~q  252 (252)
T 3f1l_A          215 KTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ  252 (252)
T ss_dssp             BCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-------
T ss_pred             CCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCCC
Confidence            78999999999998653    58899999988766543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.82  E-value=1.6e-20  Score=172.86  Aligned_cols=232  Identities=12%  Similarity=0.081  Sum_probs=161.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC----------cccc------ccccccceEEEccCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK----------NEHM------MEDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~----------~~~~------~~~~~~v~~~~~D~~   85 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.          ....      ......+.++.+|++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~---------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   96 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGAR---------VVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA   96 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC
Confidence            4578999999999999999999999999         99998861          1110      111234678899999


Q ss_pred             ChhHHHhhhc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHcCC--------CceeEEE
Q 044498           86 VMDNCLRMTS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMNGV--------MSLTFFF  147 (366)
Q Consensus        86 ~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~~~--------~~~r~I~  147 (366)
                      |.+++.++++       ++|++||+||..........   +....+++|+.++.++++++...-.        +..+||+
T Consensus        97 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~  176 (322)
T 3qlj_A           97 DWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIIN  176 (322)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEE
Confidence            9998887764       79999999997653222222   3345688999999999988754311        0028999


Q ss_pred             EecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEE
Q 044498          148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEM  224 (366)
Q Consensus       148 ~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i  224 (366)
                      +||...+..               ..+...|+.+|.+.+.+.+.++.+   .++++..+.++....+......     ..
T Consensus       177 isS~~~~~~---------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~t~~~~~~~~-----~~  236 (322)
T 3qlj_A          177 TSSGAGLQG---------------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFA-----EM  236 (322)
T ss_dssp             ECCHHHHHC---------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECTTSCCSCCSCC-----C-
T ss_pred             EcCHHHccC---------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCCCCCccchhhhh-----hh
Confidence            999755421               123567999999999999999888   4788888766522111110000     00


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc-----------------cHHHHHHHHHHhcCCCCC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV-----------------SINEMAEIILSFENEKLP  282 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~-----------------s~~el~~~i~~~~g~~~~  282 (366)
                      .........+..++|+|++++.++...    .++++++.+|...                 ++.|+++.+.+.+|.+.+
T Consensus       237 ~~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          237 MATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             -------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred             hhccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence            111122234568999999999998542    5889999887754                 779999999999886533

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.82  E-value=7e-21  Score=169.68  Aligned_cols=212  Identities=13%  Similarity=0.044  Sum_probs=148.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc-----
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      .+++++|||||+|+||++++++|+++|++         |++++|............+.++.+|+++.+++.++++     
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQ---------VVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETM   77 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCE---------EEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            35688999999999999999999999999         9999986544333333456899999999998887765     


Q ss_pred             -CCCEEEEcccccCCcc-------ccccCcchhhhhhHHHHHHHHHHHHHcCC----------CceeEEEEecccccCCC
Q 044498           96 -GVDNMSNLAADMGGMG-------FIQSNHSVIMYKNTTISFDMLEAARMNGV----------MSLTFFFVSSACIYPEF  157 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~~~~----------~~~r~I~~SS~~vyg~~  157 (366)
                       ++|++||+||......       ....+.+..+++|+.++.++++++...-.          +..++|++||...+.. 
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  156 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG-  156 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC-
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC-
Confidence             7999999999653211       12233456689999999999998875311          1137999999755421 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEe
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~  225 (366)
                                    ..+...|+.+|...+.+.+.++.++   ++++..+.++.+         ......... ..+.   
T Consensus       157 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~---  218 (257)
T 3tl3_A          157 --------------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGK-QVPH---  218 (257)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHH-TSSS---
T ss_pred             --------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHh-cCCC---
Confidence                          1124579999999999999988875   677777754432         111111111 1110   


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCccc
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVS  265 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s  265 (366)
                           ...+...+|+|++++.++..+  .++++++.+|..++
T Consensus       219 -----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          219 -----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             -----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             -----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence                 034678999999999999875  68899998886554

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.82  E-value=4.3e-19  Score=157.57  Aligned_cols=201  Identities=12%  Similarity=0.115  Sum_probs=136.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|++|.+++.++++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFT---------VFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN   76 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCE---------EEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence            5678999999999999999999999999         99999976543211      12356899999999998888765


Q ss_pred             ------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            ++|++||+||..........   +....+++|+.++.++++++.    +.+..  ++|++||...+..      
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~------  148 (252)
T 3h7a_A           77 AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQG--KIFFTGATASLRG------  148 (252)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEEEEGGGTCC------
T ss_pred             HHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEECCHHHcCC------
Confidence                  68999999997643222222   234558899999988888764    34545  8999999755422      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcE-EEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIEC-RLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~-~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                               ..+...|+.+|.+.+.+.+.++.++   ++++ ..+.++.+ ..+......  ............. +...
T Consensus       149 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~-~~~p  216 (252)
T 3h7a_A          149 ---------GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE--QMFGKDALANPDL-LMPP  216 (252)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCH
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch--hhhhhhhhcCCcc-CCCH
Confidence                     2235679999999999999988875   6777 56665544 333322211  1111111222334 7899


Q ss_pred             HHHHHHHHHHHhcC
Q 044498          238 DECVEGVLRLIKSD  251 (366)
Q Consensus       238 ~D~a~~~~~~l~~~  251 (366)
                      +|+|++++.++..+
T Consensus       217 edvA~~~~~l~s~~  230 (252)
T 3h7a_A          217 AAVAGAYWQLYQQP  230 (252)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhCc
Confidence            99999999999865

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.81  E-value=9.1e-20  Score=164.13  Aligned_cols=213  Identities=15%  Similarity=0.083  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......     ...++.++.+|++|.+++.++++ 
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~   98 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGAR---------VFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQA   98 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHH
Confidence            5678999999999999999999999999         99999875432111     00146788999999988877664 


Q ss_pred             ------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCC----CceeEEEEecccccCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGV----MSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~----~~~r~I~~SS~~vyg~~~  158 (366)
                            ++|++||+||.........   .+....+++|+.++.++++++..    .+.    .  +||++||...+....
T Consensus        99 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g--~iV~isS~~~~~~~~  176 (276)
T 2b4q_A           99 LGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPA--RVINIGSVAGISAMG  176 (276)
T ss_dssp             HHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCE--EEEEECCGGGTCCCC
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCC--EEEEECCHHHcCCCC
Confidence                  7999999999764321112   22345688999999887777643    343    5  899999986653211


Q ss_pred             CCCCCcccccCCCCCCCC-chHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecC--Ccce
Q 044498          159 QLDTDVKESEAWPAEPQD-AYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGD--GKQT  231 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~-~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~--~~~~  231 (366)
                                     +.. .|+.+|...+.+.+.++.++   ++++..++++.+ ..+...... . .......  ....
T Consensus       177 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~-~~~~~~~~~~~p~  239 (276)
T 2b4q_A          177 ---------------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAN-D-PQALEADSASIPM  239 (276)
T ss_dssp             ---------------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHH-C-HHHHHHHHHTSTT
T ss_pred             ---------------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcch-h-HHHHHHhhcCCCC
Confidence                           123 79999999999999988775   788888865432 111111110 0 0000000  0112


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+...+|+|++++.++..+    .++++++.+|.
T Consensus       240 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          240 GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            34778999999999998653    57889998774

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.81  E-value=1.8e-19  Score=159.62  Aligned_cols=209  Identities=14%  Similarity=0.050  Sum_probs=145.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......     ..+.+|+++++++.++++      
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHK---------VAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999         99999876432221     248899999988877654      


Q ss_pred             -CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||......   ....+....+++|+.++.++++++.+    .+..  +||++||...+..           
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~-----------  146 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG--RMIFIGSVSGLWG-----------  146 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCCCC--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC--EEEEECCHhhccC-----------
Confidence             6899999999754211   12223455688999999999887754    4556  9999999754321           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                          ..+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+......  ..............+.+++|+|++
T Consensus       147 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~p~~~~~~~~dvA~~  220 (247)
T 1uzm_A          147 ----IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE--RIQQGALQFIPAKRVGTPAEVAGV  220 (247)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH--HHHHHHGGGCTTCSCBCHHHHHHH
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH--HHHHHHHhcCCCCCCcCHHHHHHH
Confidence                1235679999999999999988774   788888876544 222211000  000000000112347899999999


Q ss_pred             HHHHHhcC----CCCcEEecCCCc
Q 044498          244 VLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       244 ~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ++.++...    .++.+++.+|..
T Consensus       221 ~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          221 VSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHcCccccCCcCCEEEECCCcc
Confidence            99998642    578899988754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.81  E-value=1.9e-19  Score=160.04  Aligned_cols=210  Identities=12%  Similarity=0.045  Sum_probs=147.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-ccc-----ccccceEEEccCCCh-hHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-MME-----DMFCHEFHLVDLRVM-DNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~~~-----~~~~v~~~~~D~~~~-~~l~~~~   94 (366)
                      ++++|+||||+|+||++++++|+++|+++        |++++|+.... ...     ...++.++.+|++|. +++.+++
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~--------v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKN--------FVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSE--------EEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcE--------EEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHH
Confidence            56789999999999999999999999841        77788876321 110     022468899999998 7776665


Q ss_pred             c-------CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC-----ceeEEEEecccccCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM-----SLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-----~~r~I~~SS~~vyg~~~~~~~  162 (366)
                      +       ++|++||+||...     ..+....+++|+.++.++++++...-.+     ..+||++||...+...     
T Consensus        76 ~~~~~~~g~id~lv~~Ag~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  145 (254)
T 1sby_A           76 KKIFDQLKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----  145 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHhcCCCCEEEECCccCC-----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----
Confidence            4       7999999999642     3566778999999999999988753211     1279999998765321     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHH---hCCCCeEEecCCcceeeee
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAV---TSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~---~~~~~~~i~~~~~~~~~~i  235 (366)
                                .+...|+.+|.+.+.+.+.++.+   .++++.+++++.+ ..+.....   .......-..   ....+.
T Consensus       146 ----------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~  212 (254)
T 1sby_A          146 ----------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL---LSHPTQ  212 (254)
T ss_dssp             ----------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH---TTSCCE
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH---hcCCCC
Confidence                      23557999999999999988776   5889888876654 22222110   0000000000   011245


Q ss_pred             eHHHHHHHHHHHHhcC-CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD-FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~-~~~~~~i~~~~  262 (366)
                      +++|+|++++.++... .++.|++.+|.
T Consensus       213 ~~~dvA~~i~~~~~~~~~G~~~~v~gG~  240 (254)
T 1sby_A          213 TSEQCGQNFVKAIEANKNGAIWKLDLGT  240 (254)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEEETTE
T ss_pred             CHHHHHHHHHHHHHcCCCCCEEEEeCCc
Confidence            8999999999988754 67889998874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.81  E-value=5.4e-20  Score=163.73  Aligned_cols=208  Identities=16%  Similarity=0.088  Sum_probs=147.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC-CCccccc------cccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW-NKNEHMM------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r-~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .++++||||||+|+||++++++|+++|++         |+++++ .......      .....+.++.+|+++.+++.++
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFR---------VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQA   81 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEE---------EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHH
Confidence            36789999999999999999999999999         988874 3332111      1223578999999999888777


Q ss_pred             hc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||.........   .+....+++|+.++.++++++    ++.+..  +||++||...+.    
T Consensus        82 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~----  155 (256)
T 3ezl_A           82 FDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG--RIINISSVNGQK----  155 (256)
T ss_dssp             HHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCCCGGG----
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEEcchhhcc----
Confidence            64       6899999999764322212   233456889999988777666    445555  899999975442    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-H--------HHHHHHHhCCCCeEEecC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-A--------AFSRKAVTSTDNFEMWGD  227 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~--------~~~~~~~~~~~~~~i~~~  227 (366)
                                 +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ .        .+...+.. .        
T Consensus       156 -----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~--------  215 (256)
T 3ezl_A          156 -----------GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVA-T--------  215 (256)
T ss_dssp             -----------SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHH-H--------
T ss_pred             -----------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHh-c--------
Confidence                       22345689999999999999988874   678877755433 1        12222222 1        


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                       .....+...+|+|+++..++...    .++++++.+|..+
T Consensus       216 -~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          216 -IPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             -STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             -CCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence             11234678999999999998542    5889999887643

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=1.5e-19  Score=160.00  Aligned_cols=216  Identities=16%  Similarity=0.100  Sum_probs=149.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhh---cCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMT---SGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~---~~~   97 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+........ ..++.++.+|+++.+++.+++   .++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i   75 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAK---------VIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERL   75 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999         999998754322111 114688999999999887664   479


Q ss_pred             CEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           98 DNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      |++||+||.........   .+....+++|+.++.++++++..    .+..  ++|++||...+...             
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~-------------  140 (246)
T 2ag5_A           76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG--NIINMSSVASSVKG-------------  140 (246)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCSBTTTBC-------------
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEechHhCcCC-------------
Confidence            99999999764322222   22345588999999999888753    4556  99999997554321             


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC----eEEecCCcceeeeeeHHHHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN----FEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~----~~i~~~~~~~~~~i~v~D~a~  242 (366)
                       ..+...|+.+|...+.+.+.++.++   ++++.++++..+ ..+..........    ...+........+...+|+|+
T Consensus       141 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  219 (246)
T 2ag5_A          141 -VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM  219 (246)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHH
Confidence             1135679999999999999988875   889988876643 2222211100000    000000011224789999999


Q ss_pred             HHHHHHhcC----CCCcEEecCCC
Q 044498          243 GVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       243 ~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++.++...    .++.+++.+|.
T Consensus       220 ~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          220 LCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            999998542    57889998774

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.81  E-value=1e-19  Score=162.98  Aligned_cols=217  Identities=10%  Similarity=0.021  Sum_probs=147.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......       .....+.++.+|+++.+++.+++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   90 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCS---------VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            5688999999999999999999999999         9999987543211       11234578899999998887766


Q ss_pred             c-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||..........+   ....+++|+.++.++++++..    .+..  +||++||..+ +..   
T Consensus        91 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~-~~~---  164 (267)
T 1vl8_A           91 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP--SIINIGSLTV-EEV---  164 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC--EEEEECCGGG-TCC---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc--EEEEECCcch-hcc---
Confidence            4       799999999976432222222   244688999999999887743    4556  9999999753 110   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                +..+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+......................+..
T Consensus       165 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~  234 (267)
T 1vl8_A          165 ----------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGV  234 (267)
T ss_dssp             ----------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBC
T ss_pred             ----------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcC
Confidence                      12235689999999999999988774   889888865433 1111111000000000000001123678


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .+|+|++++.++...    .++.+.+.+|..
T Consensus       235 p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          235 PEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHcCccccCCcCCeEEECCCCC
Confidence            999999999998642    578899887753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.81  E-value=3e-19  Score=157.67  Aligned_cols=204  Identities=14%  Similarity=0.069  Sum_probs=144.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC-------CCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH-------YSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~-------~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~   89 (366)
                      +++||||||+|+||++++++|+++|+       +         |++++|+.......      ....+.++.+|+++.++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   72 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPV---------LVLSSRTAADLEKISLECRAEGALTDTITADISDMAD   72 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEE---------EEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceE---------EEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHH
Confidence            46899999999999999999999998       7         99999875432111      12346889999999998


Q ss_pred             HHhhhc-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccC
Q 044498           90 CLRMTS-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        90 l~~~~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg  155 (366)
                      +.++++       ++|+|||+||.......   ...+....+++|+.++.++++++..    .+..  +||++||...+.
T Consensus        73 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~  150 (244)
T 2bd0_A           73 VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG--HIFFITSVAATK  150 (244)
T ss_dssp             HHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTS
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC--EEEEEecchhcC
Confidence            887764       69999999997542211   1223445688999999999988753    4556  999999987654


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCccee
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      .               ..+...|+.+|.+.+.+.+.++.+   .++++.+++++.+..-+   .. ..    ... . ..
T Consensus       151 ~---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~---~~-~~----~~~-~-~~  205 (244)
T 2bd0_A          151 A---------------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM---WG-KV----DDE-M-QA  205 (244)
T ss_dssp             C---------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT---TC-CC----CST-T-GG
T ss_pred             C---------------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh---hh-hc----ccc-c-cc
Confidence            2               234567999999999999887765   47888888766441100   11 00    001 1 13


Q ss_pred             eeeeHHHHHHHHHHHHhcCC----CCcEEecCCC
Q 044498          233 SLTFIDECVEGVLRLIKSDF----REPLNIGSDE  262 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~~----~~~~~i~~~~  262 (366)
                      .+++++|+|++++.++..+.    ++++...+++
T Consensus       206 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~  239 (244)
T 2bd0_A          206 LMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSG  239 (244)
T ss_dssp             GSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             cCCCHHHHHHHHHHHHhCCccccchheEEecccc
Confidence            57899999999999997652    3444444443

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.81  E-value=1.6e-19  Score=160.41  Aligned_cols=213  Identities=12%  Similarity=0.015  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAK---------VAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ   75 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999         99999875432211   12246789999999988777654   


Q ss_pred             ----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||........   ..+....+++|+.++..+.+++    ++.+ .  +||++||...+..        
T Consensus        76 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g--~iv~isS~~~~~~--------  144 (253)
T 1hxh_A           76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-G--SIINMASVSSWLP--------  144 (253)
T ss_dssp             HHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-E--EEEEECCGGGTSC--------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-C--EEEEEcchhhcCC--------
Confidence                589999999975422111   1233456889988777666554    3445 5  9999999866532        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEE-ecC---Ccceeee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEM-WGD---GKQTRSL  234 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i-~~~---~~~~~~~  234 (366)
                             ..+...|+.+|...+.+.+.++.++     ++++.++++..+ ..+...... .....- ...   ......+
T Consensus       145 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~  216 (253)
T 1hxh_A          145 -------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP-KGVSKEMVLHDPKLNRAGRA  216 (253)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC-TTCCHHHHBCBTTTBTTCCE
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc-hhhhHHHHhhhhccCccCCC
Confidence                   1234579999999999999988764     899988877644 233222211 110000 011   1122457


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..++|+|++++.++..+    .++.+++.+|.
T Consensus       217 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          217 YMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             ECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             CCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            89999999999998653    47889988774

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.81  E-value=8.3e-19  Score=157.25  Aligned_cols=209  Identities=13%  Similarity=-0.006  Sum_probs=150.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|.......       .....+.++.+|++|.+++.+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~   97 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAK---------VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALF   97 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5678999999999999999999999999         9998885432211       11235678999999999888776


Q ss_pred             c-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||.........   .+....+++|+.++.++++++.    +.+..  +||++||...+..    
T Consensus        98 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~----  171 (269)
T 4dmm_A           98 AAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG--RIINIASVVGEMG----  171 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCHHHHHC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEECchhhcCC----
Confidence            4       7999999999764322222   2334568899999999888874    34555  8999999754321    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----HHHHHHHHhCCCCeEEecCCccee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   ++++..++++.+     ............         ...
T Consensus       172 -----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~---------p~~  231 (269)
T 4dmm_A          172 -----------NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVI---------PLG  231 (269)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGC---------TTS
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcC---------CCC
Confidence                       1235679999999999999988864   788888855433     111111111111         123


Q ss_pred             eeeeHHHHHHHHHHHHhcC-----CCCcEEecCCCccc
Q 044498          233 SLTFIDECVEGVLRLIKSD-----FREPLNIGSDEMVS  265 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~~~~s  265 (366)
                      .+...+|+|+++..++..+     .++++++.+|..++
T Consensus       232 r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          232 RYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             SCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             CCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence            4678999999999998752     48899999886543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=1.9e-20  Score=167.86  Aligned_cols=216  Identities=14%  Similarity=0.057  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------c--ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------E--DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~--~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .  ...++.++.+|++|++++.++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~   76 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAK---------VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDT   76 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHH
Confidence            4578999999999999999999999999         9999987543211      0  123467899999999888876


Q ss_pred             hc-------CCCEEEEcccccCCccccccCcchhhhhhHHHHHHH----HHHHHHcC---CCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDM----LEAARMNG---VMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~l----l~a~~~~~---~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||...     ..+....+++|+.++..+    +..+++.+   ..  +||++||...+...  
T Consensus        77 ~~~~~~~~g~id~lv~~Ag~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~--  147 (267)
T 2gdz_A           77 FRKVVDHFGRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGG--IIINMSSLAGLMPV--  147 (267)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE--EEEEECCGGGTSCC--
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCC--EEEEeCCccccCCC--
Confidence            64       5899999999642     345677788998866554    44444432   44  89999998765422  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHH--H---HcCCcEEEeCCCcH-HHHHHHHHhC---CCCeEE---ecC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYT--K---DFEIECRLVGEKAP-AAFSRKAVTS---TDNFEM---WGD  227 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~--~---~~~~~~~i~r~~~~-~~~~~~~~~~---~~~~~i---~~~  227 (366)
                                   .+...|+.+|...+.+.+.++  .   ..++++.+++++.+ ..+.......   ......   ...
T Consensus       148 -------------~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (267)
T 2gdz_A          148 -------------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD  214 (267)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH
Confidence                         224579999999999888742  2   34788888876644 2222211100   000000   000


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCcccHHH
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVSINE  268 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s~~e  268 (366)
                      ......+++++|+|++++.++...  .++++++.+++.+++.|
T Consensus       215 ~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          215 MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            011134689999999999999764  68899999888776654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.81  E-value=5.5e-20  Score=165.67  Aligned_cols=219  Identities=12%  Similarity=0.003  Sum_probs=152.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|+++.+++.+++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   96 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCH---------TVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAV   96 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCE---------EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            5688999999999999999999999999         99999886432111       1235688999999998887766


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||........   ..+....+++|+.++.++++++..    .+..  +||++||...+..    
T Consensus        97 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~----  170 (277)
T 4fc7_A           97 DQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG--VIVNITATLGNRG----  170 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE--EEEEECCSHHHHT----
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC--EEEEECchhhCCC----
Confidence            4       799999999965422221   223345688999999999998743    3344  8999999755421    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCC-eEEecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDN-FEMWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~-~~i~~~~~~~~~~i  235 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+. ............ ............+.
T Consensus       171 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~  239 (277)
T 4fc7_A          171 -----------QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLG  239 (277)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCB
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCc
Confidence                       1235679999999999999988875   7888887655431 111111100000 00000111223467


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      ..+|+|++++.++...    .++++++.+|..+++
T Consensus       240 ~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          240 NKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             CHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence            8999999999998642    589999998865543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.81  E-value=3.9e-19  Score=163.50  Aligned_cols=162  Identities=16%  Similarity=0.051  Sum_probs=123.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----------ccccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----------MEDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----------~~~~~~v~~~~~D~~~~~~l   90 (366)
                      ++++||||||+|+||++++++|+++|++         |++..|+.....           ......+.++.+|++|.+++
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~---------V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v   74 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHR---------VYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSV   74 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Confidence            5678999999999999999999999999         999888632110           01123468999999999988


Q ss_pred             Hhhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCC
Q 044498           91 LRMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        91 ~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~  156 (366)
                      .++++       ++|++||+||.........   .+....+++|+.++.++++++    ++.+..  ++|++||...+..
T Consensus        75 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g--~iV~isS~~~~~~  152 (324)
T 3u9l_A           75 DRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHG--LLIWISSSSSAGG  152 (324)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEEecchhccC
Confidence            88765       7999999999764222222   223455899999999999988    555666  8999999765532


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP  208 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~  208 (366)
                      .              ......|+.+|.+.+.+.+.++.+   +|+++++++++.+
T Consensus       153 ~--------------~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v  193 (324)
T 3u9l_A          153 T--------------PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAF  193 (324)
T ss_dssp             C--------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC
T ss_pred             C--------------CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCcc
Confidence            1              112457999999999999999887   4889888876654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.81  E-value=6.2e-20  Score=162.41  Aligned_cols=213  Identities=13%  Similarity=0.017  Sum_probs=144.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC-CCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW-NKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r-~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++| +......      .....+.++.+|++|++++.+++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGAN---------VVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMV   73 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            4678999999999999999999999999         999988 4322111      01234678999999999888776


Q ss_pred             c-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||.........   .+....+++|+.++.++++++.    +.+..  +||++||...+...   
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~---  148 (246)
T 2uvd_A           74 KQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHG--RIVNIASVVGVTGN---  148 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCTHHHHCC---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEECCHHhcCCC---
Confidence            5       7999999999754221112   2334568899999776666554    45666  99999997543211   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                  .+...|+.+|...+.+.+.++.++   ++++..++++.+. .+... .. ...............+.+
T Consensus       149 ------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~p~~~~~~  214 (246)
T 2uvd_A          149 ------------PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LD-ENIKAEMLKLIPAAQFGE  214 (246)
T ss_dssp             ------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CC-TTHHHHHHHTCTTCSCBC
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cC-HHHHHHHHhcCCCCCCcC
Confidence                        124579999999999988887764   7888888665431 11000 00 000000000011234789


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+|+|++++.++...    .++.+++.+|.
T Consensus       215 ~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          215 AQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            999999999998642    47889998774

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.81  E-value=1.1e-19  Score=163.67  Aligned_cols=215  Identities=14%  Similarity=0.003  Sum_probs=149.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|++|.+++.++++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  101 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQ---------VAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLD  101 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            5689999999999999999999999999         99999976532211      12356889999999998888765


Q ss_pred             -------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||..........+.   +..+++|+.++.++++++...    + ..  ++|++||...+...   
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g--~iv~isS~~~~~~~---  176 (276)
T 3r1i_A          102 QMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGG--TIITTASMSGHIIN---  176 (276)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--EEEEECCGGGTSCC---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--EEEEECchHhcccC---
Confidence                   7999999999765332222222   344789999999998887653    2 23  79999997544221   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                ...+...|+.+|.+.+.+.+.++.+   .++++..+.++.+ ..+......   ....+........+..
T Consensus       177 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~~~~p~~r~~~  243 (276)
T 3r1i_A          177 ----------IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD---YHALWEPKIPLGRMGR  243 (276)
T ss_dssp             ----------CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG---GHHHHGGGSTTSSCBC
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH---HHHHHHhcCCCCCCcC
Confidence                      1124567999999999999999888   4788877754432 111110000   0000001112234678


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .+|+|++++.++...    .++++++.+|..
T Consensus       244 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          244 PEELTGLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             GGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence            999999999998642    588999988753

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.81  E-value=1.6e-19  Score=163.45  Aligned_cols=231  Identities=10%  Similarity=-0.033  Sum_probs=155.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc------------------cccccccceEEEcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH------------------MMEDMFCHEFHLVD   83 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~------------------~~~~~~~v~~~~~D   83 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|.....                  .......+.++.+|
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGAD---------IILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVD   79 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe---------EEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEcc
Confidence            5678999999999999999999999999         99998863210                  00112356889999


Q ss_pred             CCChhHHHhhhc-------CCCEEEEcccccCCcc-ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           84 LRVMDNCLRMTS-------GVDNMSNLAADMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        84 ~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      +++.+++.++++       ++|++||+||...... ....+....+++|+.++.++++++...-.+..++|++||...+.
T Consensus        80 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~  159 (287)
T 3pxx_A           80 VRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLI  159 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcc
Confidence            999998877664       7999999999764321 12233456689999999999999987522212899999976654


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HH------HHHHHHhCCCCeE--
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AA------FSRKAVTSTDNFE--  223 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~------~~~~~~~~~~~~~--  223 (366)
                      .....+.  .+..  +..+...|+.+|...+.+.+.++.++   ++++..+.++.+ ..      .............  
T Consensus       160 ~~~~~~~--~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T 3pxx_A          160 AAAQPPG--AGGP--QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRA  235 (287)
T ss_dssp             HHHCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHH
T ss_pred             ccccccc--cccc--CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhH
Confidence            3222211  1111  22345679999999999999998886   788888855433 11      1111111000000  


Q ss_pred             -----EecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          224 -----MWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       224 -----i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                           ..........+.+++|+|++++.++...    .++++++.+|..++
T Consensus       236 ~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          236 DALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence                 0001111146789999999999998542    58899999886543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.81  E-value=7e-19  Score=157.45  Aligned_cols=197  Identities=14%  Similarity=0.042  Sum_probs=142.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+...........+.++.+|++|.+++.++++      
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHP---------LLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCC---------EEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            4678999999999999999999999999         9999997654333333356889999999988887764      


Q ss_pred             -CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||..........+   ....+++|+.++.++++++.    +.+..  +||++||...+..           
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g--~IV~isS~~~~~~-----------  152 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG--TIINISSIAGKKT-----------  152 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEEcChhhCCC-----------
Confidence             799999999976432222222   34458899999998777664    45666  9999999765532           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHH--------HHHHhCCCCeEEecCCcceeeee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFS--------RKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~--------~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                          ..+...|+.+|...+.+.+.++.++   ++++..+.++.+. .+.        ...... .       ......+.
T Consensus       153 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~-------~~~~~r~~  220 (266)
T 3p19_A          153 ----FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDA-W-------RVDMGGVL  220 (266)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHH-H-------HHHTTCCB
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHh-h-------cccccCCC
Confidence                2235679999999999999988874   7888888554331 110        000000 0       00123468


Q ss_pred             eHHHHHHHHHHHHhcCC
Q 044498          236 FIDECVEGVLRLIKSDF  252 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~~  252 (366)
                      +++|+|++++.++..+.
T Consensus       221 ~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          221 AADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             CHHHHHHHHHHHHHSCT
T ss_pred             CHHHHHHHHHHHHcCCC
Confidence            89999999999998864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.81  E-value=2.8e-19  Score=161.58  Aligned_cols=216  Identities=14%  Similarity=0.069  Sum_probs=152.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......       .....+.++.+|+++.+++.+++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   98 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCK---------VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF   98 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHH
Confidence            5678999999999999999999999999         9999987643211       11234678999999998877665


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                      +       ++|++||+||........   ..+....+++|+.++.++++++...  +..  +||++||...+...     
T Consensus        99 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g--~iv~isS~~~~~~~-----  171 (283)
T 1g0o_A           99 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG--RLILMGSITGQAKA-----  171 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC--EEEEECCGGGTCSS-----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCC--eEEEEechhhccCC-----
Confidence            3       699999999976432121   2233556899999999999999886  555  99999997543211     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC----CC---C--eEEecC--
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS----TD---N--FEMWGD--  227 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~----~~---~--~~i~~~--  227 (366)
                               ..+...|+.+|...+.+.+.++.++   ++++.+++++.+ ..+.......    ..   .  ...+..  
T Consensus       172 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T 1g0o_A          172 ---------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ  242 (283)
T ss_dssp             ---------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc
Confidence                     1125679999999999999988764   789988876544 3333322110    00   0  000000  


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ......+.+.+|+|+++..++...    .++++++.+|.
T Consensus       243 ~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          243 WSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             SCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            112234678999999999998653    57889988774

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.81  E-value=1.6e-19  Score=161.29  Aligned_cols=218  Identities=10%  Similarity=0.043  Sum_probs=147.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChhHHH
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~~l~   91 (366)
                      .+++++|||||+|.||++++++|+++|++         |++++|......         ......+.++.+|++|.+++.
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   79 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVN---------LVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVA   79 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCE---------EEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            36689999999999999999999999999         999887543211         111235688999999999888


Q ss_pred             hhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCC
Q 044498           92 RMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        92 ~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++++       ++|++||+||..........+   ....+++|+.++.++++++...  +..  ++|++||...+...  
T Consensus        80 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g--~iv~isS~~~~~~~--  155 (262)
T 3ksu_A           80 KLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNG--HIITIATSLLAAYT--  155 (262)
T ss_dssp             HHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEE--EEEEECCCHHHHHH--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--EEEEEechhhccCC--
Confidence            7764       689999999976533222222   3445789999999999999875  333  89999997654321  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                   .+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+...... ...............+.
T Consensus       156 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~r~~  221 (262)
T 3ksu_A          156 -------------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET-KESTAFHKSQAMGNQLT  221 (262)
T ss_dssp             -------------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSC
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc-hHHHHHHHhcCcccCCC
Confidence                         224569999999999999999886   788887766544 333322111 11111112222334578


Q ss_pred             eHHHHHHHHHHHHhcC---CCCcEEecCCCccc
Q 044498          236 FIDECVEGVLRLIKSD---FREPLNIGSDEMVS  265 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~---~~~~~~i~~~~~~s  265 (366)
                      ..+|+|++++.++...   .++.+++.+|....
T Consensus       222 ~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          222 KIEDIAPIIKFLTTDGWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             CGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence            8999999999998653   47889998876443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.81  E-value=3.5e-19  Score=159.41  Aligned_cols=192  Identities=14%  Similarity=0.034  Sum_probs=142.0

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcC---CCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSER---HYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .++++||||||+|+||++++++|+++|   ++         |++++|+.......     ...++.++.+|+++.+++.+
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~---------V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   89 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQH---------LFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDK   89 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSE---------EEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcE---------EEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHH
Confidence            367899999999999999999999999   88         99999986542211     12357899999999998887


Q ss_pred             hhc---------CCCEEEEcccccC-Cccc---cccCcchhhhhhHHHHHHHHHHHHHc----------C-----CCcee
Q 044498           93 MTS---------GVDNMSNLAADMG-GMGF---IQSNHSVIMYKNTTISFDMLEAARMN----------G-----VMSLT  144 (366)
Q Consensus        93 ~~~---------~~d~vi~~a~~~~-~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~----------~-----~~~~r  144 (366)
                      +++         ++|+|||+||... ....   ...+....+++|+.++.++++++...          +     ..  +
T Consensus        90 ~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~  167 (267)
T 1sny_A           90 LVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRA--A  167 (267)
T ss_dssp             HHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTC--E
T ss_pred             HHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCc--e
Confidence            765         7999999999754 1111   12233456889999999999888654          2     34  8


Q ss_pred             EEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHHHHHHHHhCCCC
Q 044498          145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAAFSRKAVTSTDN  221 (366)
Q Consensus       145 ~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~  221 (366)
                      ||++||...+....            +..+...|+.+|++.+.+.+.++.+   .++++.+++++.+..-+    .    
T Consensus       168 iv~isS~~~~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~----~----  227 (267)
T 1sny_A          168 IINMSSILGSIQGN------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM----G----  227 (267)
T ss_dssp             EEEECCGGGCSTTC------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT----T----
T ss_pred             EEEEecccccccCC------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCC----C----
Confidence            99999987654321            1134567999999999999998877   48999999876552100    0    


Q ss_pred             eEEecCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          222 FEMWGDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       222 ~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                          ..    ......+|+|+.++.++...
T Consensus       228 ----~~----~~~~~~~~~a~~~~~~~~~~  249 (267)
T 1sny_A          228 ----GS----SAPLDVPTSTGQIVQTISKL  249 (267)
T ss_dssp             ----CT----TCSBCHHHHHHHHHHHHHHC
T ss_pred             ----CC----CCCCCHHHHHHHHHHHHHhc
Confidence                00    12467899999999998753

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.81  E-value=1e-18  Score=156.13  Aligned_cols=204  Identities=18%  Similarity=0.102  Sum_probs=139.6

Q ss_pred             ccccCCCCCC-CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccC
Q 044498           12 KLERESHWPS-GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDL   84 (366)
Q Consensus        12 ~~~~~~~~~~-~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~   84 (366)
                      .....+.|+. ++++||||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+
T Consensus        17 ~~~~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~   87 (262)
T 3rkr_A           17 IDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGAR---------VVLTARDVEKLRAVEREIVAAGGEAESHACDL   87 (262)
T ss_dssp             --------CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             CCCCcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHhCCceeEEEecC
Confidence            3334444443 5688999999999999999999999999         9999997653221      1123568999999


Q ss_pred             CChhHHHhhhc-------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEe
Q 044498           85 RVMDNCLRMTS-------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVS  149 (366)
Q Consensus        85 ~~~~~l~~~~~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~S  149 (366)
                      ++.+++.++++       .+|++||+||...... .   ...+....+++|+.++.++++++..    .+..  +||++|
T Consensus        88 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~is  165 (262)
T 3rkr_A           88 SHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRG--HIINIS  165 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC--EEEEEC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc--eEEEEe
Confidence            99998877654       5999999999732111 1   1223345688999999988888654    4556  899999


Q ss_pred             cccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcHHH-HHHHHHhCCCCeEEe
Q 044498          150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAPAA-FSRKAVTSTDNFEMW  225 (366)
Q Consensus       150 S~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~~~-~~~~~~~~~~~~~i~  225 (366)
                      |...+.               +..+...|+.+|.+.+.+.+.++.+   .++++..++++.+.. +......        
T Consensus       166 S~~~~~---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------  222 (262)
T 3rkr_A          166 SLAGKN---------------PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA--------  222 (262)
T ss_dssp             SSCSSC---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------
T ss_pred             chhhcC---------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc--------
Confidence            976542               2234568999999999999988877   478988887665532 2211111        


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                        ......++..+|+|+++..++...
T Consensus       223 --~~~~~~~~~p~dvA~~v~~l~s~~  246 (262)
T 3rkr_A          223 --KKSALGAIEPDDIADVVALLATQA  246 (262)
T ss_dssp             --------CCCHHHHHHHHHHHHTCC
T ss_pred             --ccccccCCCHHHHHHHHHHHhcCc
Confidence              112234678999999999999765

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.81  E-value=4e-19  Score=158.60  Aligned_cols=211  Identities=10%  Similarity=-0.021  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--cc---cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MM---EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~---~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+  |+||++++++|+++|++         |++++|+....  ..   .....+.++.+|+++.+++.+++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~   77 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE---------VALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALF   77 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCE---------EEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHH
Confidence            46789999999  99999999999999999         99999876310  00   01113688999999999888776


Q ss_pred             c-------CCCEEEEcccccCC----c---cccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGG----M---GFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||....    .   .....+....+++|+.++.++++++.+.-.+..+||++||...+..    
T Consensus        78 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----  153 (261)
T 2wyu_A           78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV----  153 (261)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB----
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC----
Confidence            4       78999999996531    0   1122234556889999999999999875111128999999655421    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~~  226 (366)
                                 ..+...|+.+|...+.+.+.++.++   ++++..++++.+           ..+...+.. ..      
T Consensus       154 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~------  215 (261)
T 2wyu_A          154 -----------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQ-TA------  215 (261)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHH-HS------
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHh-cC------
Confidence                       1234579999999999999988876   889888865432           111111111 11      


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                         ....+.+++|+|++++.++...    .++++++.+|..++.
T Consensus       216 ---p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          216 ---PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             ---TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             ---CCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence               1123578999999999998542    478999998876543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.80  E-value=2.4e-20  Score=168.17  Aligned_cols=208  Identities=13%  Similarity=-0.029  Sum_probs=146.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~  103 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGAD---------VAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETIS  103 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCE---------EEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHH
Confidence            5678999999999999999999999999         99999876532111      12346889999999998887764


Q ss_pred             -------CCCEEEEcccccCC-cc----ccccCcchhhhhhHHH----HHHHHHHHHHcCCCceeEEEEecccccCCCCC
Q 044498           96 -------GVDNMSNLAADMGG-MG----FIQSNHSVIMYKNTTI----SFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~-~~----~~~~~~~~~~~~nv~~----~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                             .+|+|||+||.... ..    ....+....+++|+.+    ++++++.+++.+.+  +||++||...+...  
T Consensus       104 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~--~iv~isS~~~~~~~--  179 (279)
T 3ctm_A          104 QQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKG--SLIITSSISGKIVN--  179 (279)
T ss_dssp             HHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCCTTSCC---
T ss_pred             HHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--eEEEECchHhccCC--
Confidence                   49999999997542 11    1112234568899999    56777777777777  99999997644220  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCC--cEEEeCCCcH---------HHHHHHHHhCCCCeEEecCC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEI--ECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~--~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~  228 (366)
                                 +..+...|+.+|+..|.+++.++.+++-  ++..++++.+         ..+...+.. ..        
T Consensus       180 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~--------  239 (279)
T 3ctm_A          180 -----------IPQLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFASKDMKAKWWQ-LT--------  239 (279)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSCCHHHHHHHHH-HS--------
T ss_pred             -----------CCCCcccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCccccccccChHHHHHHHH-hC--------
Confidence                       1234567999999999999999887522  6666654322         111111111 00        


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                       ....+++++|+|+++..++...    .++++++.+|..
T Consensus       240 -p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          240 -PLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             -TTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             -CccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence             1124788999999999998652    578999988754

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=1.6e-19  Score=164.80  Aligned_cols=216  Identities=10%  Similarity=-0.025  Sum_probs=149.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----------cccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----------EDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----------~~~~~v~~~~~D~~~~~~l   90 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......           .....+.++.+|+++.+++
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v   87 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSN---------VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   87 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHH
Confidence            5679999999999999999999999999         9999987543211           0123568999999999988


Q ss_pred             Hhhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCC
Q 044498           91 LRMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        91 ~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~  156 (366)
                      .++++       ++|+|||+||.........   .+....+++|+.++.++++++...    +..  +||++||...++ 
T Consensus        88 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~-  164 (303)
T 1yxm_A           88 NNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG--SIVNIIVPTKAG-  164 (303)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE--EEEEECCCCTTC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--eEEEEEeecccC-
Confidence            87764       5999999999653211111   223456889999999999997652    244  899999976221 


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HH-HHHHHh-CCCCeEEecCCcc
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AF-SRKAVT-STDNFEMWGDGKQ  230 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~-~~~~~~-~~~~~~i~~~~~~  230 (366)
                                     ..+...|+.+|...+.+.+.++.++   ++++.++++..+. .. +..... ......-......
T Consensus       165 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p  229 (303)
T 1yxm_A          165 ---------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP  229 (303)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST
T ss_pred             ---------------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc
Confidence                           1224579999999999999988875   7888888765431 10 110000 0000000000011


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ...+.+++|+|++++.++...    .++.+++.+|..+
T Consensus       230 ~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          230 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeec
Confidence            234789999999999998642    4789999988654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.80  E-value=1.3e-19  Score=160.49  Aligned_cols=214  Identities=16%  Similarity=0.109  Sum_probs=150.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   75 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGAT---------VIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQ   75 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            5689999999999999999999999999         99999876432211   12346888999999998887764   


Q ss_pred             ----CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHH----HHHcC-CCceeEEEEecccccCCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEA----ARMNG-VMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a----~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                          ++|++||+||..........   +....+++|+.++.+++++    +++.+ ..  ++|++||...+..       
T Consensus        76 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~-------  146 (247)
T 3rwb_A           76 ALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAG--RVISIASNTFFAG-------  146 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCTHHHHT-------
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCc--EEEEECchhhccC-------
Confidence                79999999997643222222   2345688999999998888    44444 45  8999999765432       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                              ..+...|+.+|...+.+.+.++.+   +++++..+.++.+ ..+...... .....+.........+...+|
T Consensus       147 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~ped  217 (247)
T 3rwb_A          147 --------TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH-NEAFGFVEMLQAMKGKGQPEH  217 (247)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG-GGGHHHHHHHSSSCSCBCHHH
T ss_pred             --------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh-hHHHHHHhcccccCCCcCHHH
Confidence                    123567999999999999998887   4788888866543 222221111 000000000011234567999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|+++..++...    .++++++.+|.
T Consensus       218 va~~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          218 IADVVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999998653    58899998774

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.80  E-value=3.1e-19  Score=159.92  Aligned_cols=218  Identities=12%  Similarity=0.053  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......        ....+.++.+|+++.+.+.++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   79 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGAN---------VLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDV   79 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHH
Confidence            5678999999999999999999999999         99999876432111        123457889999999988877


Q ss_pred             hc---CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCC
Q 044498           94 TS---GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        94 ~~---~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                      ++   ++|++||+||..........+.   ...+++|+.++.++.+++.    +.+..  ++|++||...+.        
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~--------  149 (267)
T 3t4x_A           80 IEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEG--RVIFIASEAAIM--------  149 (267)
T ss_dssp             HHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEE--EEEEECCGGGTS--------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC--EEEEEcchhhcc--------
Confidence            65   7999999999765432322233   3348899999777766654    35555  899999976552        


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC---CCCeEE----------ec
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS---TDNFEM----------WG  226 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~---~~~~~i----------~~  226 (366)
                             +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+.......   ......          ..
T Consensus       150 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (267)
T 3t4x_A          150 -------PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR  222 (267)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC
T ss_pred             -------CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC
Confidence                   22346689999999999999999886   466666654432 2222222210   000000          00


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      .......+.+++|+|+++..++...    .++++++.+|...+
T Consensus       223 ~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          223 PTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             TTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             CcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            1112346889999999999998642    58999999887654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=2.2e-18  Score=152.39  Aligned_cols=205  Identities=13%  Similarity=0.060  Sum_probs=147.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhc-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+....... ...++.++.+|++|.+++.++++     
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGAR---------LVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999         99999875432211 11136889999999988877664     


Q ss_pred             --CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 --GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                        ++|++||+||..........   +.+..+++|+.++.++++++.+.    +..  ++|++||...++.          
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~~~~----------  142 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG--SIVLTASRVYLGN----------  142 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE--EEEEECCGGGGCC----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--EEEEEccchhcCC----------
Confidence              59999999997542212222   23456889999999998887653    455  8999999764332          


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                            .+...|+.+|...+.+.+.++.++   ++++..++++.+         ......... ..         ....+
T Consensus       143 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~---------p~~~~  206 (245)
T 1uls_A          143 ------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIA-AT---------PLGRA  206 (245)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHH-TC---------TTCSC
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHh-hC---------CCCCC
Confidence                  124579999999999998887764   788888865433         111111111 11         11236


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ...+|+|++++.++...    .++.+.+.+|..
T Consensus       207 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          207 GKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            78999999999998642    578899987753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.80  E-value=2.9e-19  Score=161.43  Aligned_cols=217  Identities=15%  Similarity=0.003  Sum_probs=149.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~   97 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVT---------VGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVR   97 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            5578999999999999999999999999         9999987643211      112346789999999988877664


Q ss_pred             -------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||...... .   ...+.+..+++|+.++.++++++    ++.+..  ++|++||...+...   
T Consensus        98 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~Iv~isS~~~~~~~---  172 (283)
T 3v8b_A           98 DLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGG--AIVVVSSINGTRTF---  172 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCSBTTTBC---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--eEEEEcChhhccCC---
Confidence                   7999999999753211 1   12223456899999999999988    445555  89999997543211   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh-----CCCCeEEecCCcce
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT-----STDNFEMWGDGKQT  231 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~-----~~~~~~i~~~~~~~  231 (366)
                                +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+......     ...+..........
T Consensus       173 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~  242 (283)
T 3v8b_A          173 ----------TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPI  242 (283)
T ss_dssp             ----------CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGG
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCcc
Confidence                      12245689999999999999999885   677777754433 111100000     00001111111111


Q ss_pred             --eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          232 --RSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       232 --~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                        ..+...+|+|+++..++...    .++++++.+|.
T Consensus       243 ~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          243 TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence              34678999999999998642    58899998874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.80  E-value=9.5e-19  Score=156.30  Aligned_cols=203  Identities=12%  Similarity=0.034  Sum_probs=138.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   72 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAK---------ILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFA   72 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            35678999999999999999999999999         9999987643211      11234678899999999887765


Q ss_pred             c-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||..........   +....+++|+.++.++++++..    .+..  ++|++||...+..    
T Consensus        73 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~IV~isS~~~~~~----  146 (264)
T 3tfo_A           73 QAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSG--QIINIGSIGALSV----  146 (264)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCe--EEEEEcCHHHccc----
Confidence            4       79999999997643222222   2345588999999888877643    4555  8999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                                 ..+...|+.+|...+.+.+.++.++ ++++..+.++.+ ..+...... ........  .....+...+
T Consensus       147 -----------~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~--~~~~~~~~pe  212 (264)
T 3tfo_A          147 -----------VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITH-EETMAAMD--TYRAIALQPA  212 (264)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--------------------------CCCHH
T ss_pred             -----------CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccc-hhHHHHHH--hhhccCCCHH
Confidence                       1235679999999999999998886 677777766544 233222221 11111100  0111246899


Q ss_pred             HHHHHHHHHHhcCC
Q 044498          239 ECVEGVLRLIKSDF  252 (366)
Q Consensus       239 D~a~~~~~~l~~~~  252 (366)
                      |+|++++.++..+.
T Consensus       213 dvA~~v~~l~s~~~  226 (264)
T 3tfo_A          213 DIARAVRQVIEAPQ  226 (264)
T ss_dssp             HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhcCCc
Confidence            99999999998763

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.80  E-value=1.1e-18  Score=159.03  Aligned_cols=204  Identities=14%  Similarity=0.094  Sum_probs=141.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .+++||||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGAR---------LVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLAD  100 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            4578999999999999999999999999         99999976532211      12356899999999998887764


Q ss_pred             -------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||........   ..+....+++|+.++.++++++..    .+ ..  +||++||...+..    
T Consensus       101 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g--~iv~isS~~~~~~----  174 (301)
T 3tjr_A          101 EAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGG--HIAFTASFAGLVP----  174 (301)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE--EEEEECCGGGTSC----
T ss_pred             HHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCc--EEEEeCchhhcCC----
Confidence                   799999999976432221   223345688999999999998754    33 34  8999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh-C-------CCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT-S-------TDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~-~-------~~~~~i~~~~  228 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   |+++..+.++.+ ..+...... .       ..+...++..
T Consensus       175 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (301)
T 3tjr_A          175 -----------NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPL  243 (301)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhcccc
Confidence                       2235679999999999999988775   788888876644 222222111 0       1111112222


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      .....++.++|+|++++.+++.+
T Consensus       244 ~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          244 PTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             -----CCCHHHHHHHHHHHHHHT
T ss_pred             ccccCCCCHHHHHHHHHHHHhcC
Confidence            33456889999999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.80  E-value=3.8e-19  Score=159.06  Aligned_cols=215  Identities=13%  Similarity=0.077  Sum_probs=151.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|++|.+++.++++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   80 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGAD---------LVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVD   80 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            5678999999999999999999999999         9999987543211      122356899999999998887664


Q ss_pred             -------CCCEEEEcccccCCcc-ccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG-FIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||...... ...   .+....+++|+.++.++++++..    .+ .  ++|++||...+..    
T Consensus        81 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g--~iv~isS~~~~~~----  153 (264)
T 3ucx_A           81 ETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-G--AVVNVNSMVVRHS----  153 (264)
T ss_dssp             HHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-C--EEEEECCGGGGCC----
T ss_pred             HHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C--EEEEECcchhccC----
Confidence                   7999999998753211 112   23345588999999999887653    23 4  8999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHh-----CCCC----eEEecC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVT-----STDN----FEMWGD  227 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~-----~~~~----~~i~~~  227 (366)
                                 ..+...|+.+|...+.+.+.++.+   +++++..+.++.+ ..+......     .+..    ......
T Consensus       154 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (264)
T 3ucx_A          154 -----------QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA  222 (264)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc
Confidence                       223567999999999999998887   4788888866543 222211110     0000    000112


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ......+..++|+|++++.++...    .++++++.+|..
T Consensus       223 ~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          223 GSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             TSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             cCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            233445789999999999998642    589999988864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.80  E-value=1.4e-18  Score=152.03  Aligned_cols=194  Identities=10%  Similarity=0.022  Sum_probs=138.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhcC---
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTSG---   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~~---   96 (366)
                      |++||||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++.   
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   71 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKA---------TYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS   71 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCC---------EEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh
Confidence            568999999999999999999999999         99999976532211   123568999999999999888764   


Q ss_pred             -CCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           97 -VDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        97 -~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                       .|++||+||..........   +....+++|+.++.++++++.+.   ...  ++|++||...+..             
T Consensus        72 ~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~iv~isS~~~~~~-------------  136 (230)
T 3guy_A           72 IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV--NVVMIMSTAAQQP-------------  136 (230)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC--EEEEECCGGGTSC-------------
T ss_pred             cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEeecccCCC-------------
Confidence             4999999997643222222   23446889999999999988764   223  7999999765532             


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHH
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVL  245 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~  245 (366)
                        ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+......          ......+..++|+|+++.
T Consensus       137 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~  204 (230)
T 3guy_A          137 --KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAEDAALMIH  204 (230)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHHHHHHHHH
Confidence              2335689999999999999999886   688877766544 333222111          112345788999999999


Q ss_pred             HHHhcCC
Q 044498          246 RLIKSDF  252 (366)
Q Consensus       246 ~~l~~~~  252 (366)
                      .++..+.
T Consensus       205 ~l~~~~~  211 (230)
T 3guy_A          205 GALANIG  211 (230)
T ss_dssp             HHCCEET
T ss_pred             HHHhCcC
Confidence            9987653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.80  E-value=4.1e-19  Score=156.62  Aligned_cols=204  Identities=14%  Similarity=0.105  Sum_probs=147.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc-----
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      .++++||||||+|+||++++++|+++|++         |++++|+......    ...++.+|+++.+++.++++     
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWW---------VASIDVVENEEAS----ASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCE---------EEEEESSCCTTSS----EEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCE---------EEEEeCChhhccC----CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999         9999998654321    23677899999988777654     


Q ss_pred             ----CCCEEEEcccccCCccc----cccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 ----GVDNMSNLAADMGGMGF----IQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                          ++|++||+||.......    ...+....+++|+.++.++++++.+.-.+..+||++||...+..           
T Consensus        72 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  140 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------  140 (241)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------
T ss_pred             hCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------
Confidence                68999999997542111    11233456889999999999998764111128999999766532           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                          ..+...|+.+|...+.+.+.++.++     ++++..++++.+ ..+...... ..         ....++..+|+|
T Consensus       141 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~---------~~~~~~~~~~vA  206 (241)
T 1dhr_A          141 ----TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP-EA---------DFSSWTPLEFLV  206 (241)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST-TS---------CGGGSEEHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc-ch---------hhccCCCHHHHH
Confidence                1235679999999999999988765     488888877654 333332221 11         112357789999


Q ss_pred             HHHHHHHhcC----CCCcEEecCCC
Q 044498          242 EGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       242 ~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++..++...    .++.+++.++.
T Consensus       207 ~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          207 ETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHHHhcCCCcCccceEEEEeCCC
Confidence            9999998653    47778876654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=2.7e-19  Score=160.75  Aligned_cols=198  Identities=15%  Similarity=0.006  Sum_probs=142.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .++++||||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.+++
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   99 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSK---------LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   99 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHH
Confidence            36689999999999999999999999999         99999875432111      1235689999999998887766


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|+|||+||........   ..+....+++|+.++.++++++.    +.+..  +||++||...+...   
T Consensus       100 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~~---  174 (272)
T 1yb1_A          100 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG--HIVTVASAAGHVSV---  174 (272)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCCC-CCCH---
T ss_pred             HHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--EEEEEechhhcCCC---
Confidence            4       799999999975422111   12234568899999777776664    45666  99999998665321   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc------CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF------EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~------~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                  .+...|+.+|.+.+.+++.++.++      ++++.++++..+..-+   .. .       .......+
T Consensus       175 ------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~---~~-~-------~~~~~~~~  231 (272)
T 1yb1_A          175 ------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF---IK-N-------PSTSLGPT  231 (272)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS---TT-C-------THHHHCCC
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc---cc-c-------ccccccCC
Confidence                        124579999999999999988875      7888888876442111   11 0       00112357


Q ss_pred             eeHHHHHHHHHHHHhcCCCCc
Q 044498          235 TFIDECVEGVLRLIKSDFREP  255 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~~~~~  255 (366)
                      ++++|+|++++.++..+...+
T Consensus       232 ~~~~dva~~i~~~~~~~~~~~  252 (272)
T 1yb1_A          232 LEPEEVVNRLMHGILTEQKMI  252 (272)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEE
T ss_pred             CCHHHHHHHHHHHHHcCCCEE
Confidence            899999999999998764433

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.79  E-value=3.5e-20  Score=166.30  Aligned_cols=217  Identities=12%  Similarity=-0.007  Sum_probs=155.5

Q ss_pred             CCCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ...++||||||+  |+||++++++|+++|++         |++++|+......     .....+.++.+|+++.+++.++
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   82 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAE---------LAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDAL   82 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC---------EEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHH
Confidence            367899999999  99999999999999999         9999987432111     1122468999999999988877


Q ss_pred             hc-------CCCEEEEcccccCCc----c----ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGM----G----FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~----~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      ++       ++|++||+||.....    .    ....+....+++|+.++.++++++...-.+..++|++||...+..  
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--  160 (271)
T 3ek2_A           83 FASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA--  160 (271)
T ss_dssp             HHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--
T ss_pred             HHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC--
Confidence            64       689999999976421    1    122233556889999999999999765211128999999765432  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-----------HHHHHHhCCCCeEE
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-----------FSRKAVTSTDNFEM  224 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-----------~~~~~~~~~~~~~i  224 (366)
                                   ..+...|+.+|++.+.+.+.++.++   ++++..+.++.+..           +...... .     
T Consensus       161 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~-----  221 (271)
T 3ek2_A          161 -------------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVES-N-----  221 (271)
T ss_dssp             -------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHH-H-----
T ss_pred             -------------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHh-c-----
Confidence                         2235689999999999999988875   78888886554421           1111111 1     


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcccHHHHHH
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVSINEMAE  271 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~~el~~  271 (366)
                          .....+..++|+|++++.++...    .++++++.+|..+++.++++
T Consensus       222 ----~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          222 ----SPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             ----STTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             ----CCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence                11233577999999999998652    58899999998877766544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.79  E-value=1.2e-19  Score=163.57  Aligned_cols=220  Identities=15%  Similarity=0.027  Sum_probs=152.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   77 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAK---------VVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVE   77 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4678999999999999999999999999         9999987643211      122356788999999998887764


Q ss_pred             -------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||...... .   ...+....+++|+.++.++++++..    .+..  ++|++||...+..    
T Consensus        78 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~----  151 (280)
T 3tox_A           78 LAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGG--SLTFTSSFVGHTA----  151 (280)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCSBTTTB----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEEcChhhCcC----
Confidence                   7999999999753211 1   1223455689999999999888754    3444  8999999765421    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCC--eEEecCCcceeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDN--FEMWGDGKQTRSL  234 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~--~~i~~~~~~~~~~  234 (366)
                                +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+. .+.........+  ............+
T Consensus       152 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~  221 (280)
T 3tox_A          152 ----------GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRI  221 (280)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSC
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCC
Confidence                      12345679999999999999998886   7888777554321 110000000000  0000111122347


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCcccH
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEMVSI  266 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s~  266 (366)
                      ..++|+|++++.++...    .++++++.+|..++.
T Consensus       222 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          222 ARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             cCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            78999999999998653    589999999876553

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.79  E-value=8e-19  Score=156.12  Aligned_cols=217  Identities=13%  Similarity=-0.027  Sum_probs=153.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAE---------VLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAG   77 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999876532211   12356899999999988776653   


Q ss_pred             ----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 ----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                          ++|++||+||........   ..+....+++|+.++.++++++.+.-.+..++|++||...+..            
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  145 (255)
T 4eso_A           78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG------------  145 (255)
T ss_dssp             HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB------------
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC------------
Confidence                789999999976432222   2233456899999999999999874211128999999765432            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                         ..+...|+.+|...+.+.+.++.++   ++++..+.++.+           ..........      .........+
T Consensus       146 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~------~~~~~p~~r~  216 (255)
T 4eso_A          146 ---HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTL------GDNITPMKRN  216 (255)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHH------HHHHSTTSSC
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHH------HhccCCCCCC
Confidence               2235679999999999999998886   788887754322           0000000000      0000112346


Q ss_pred             eeHHHHHHHHHHHHhcC---CCCcEEecCCCcccHHH
Q 044498          235 TFIDECVEGVLRLIKSD---FREPLNIGSDEMVSINE  268 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~---~~~~~~i~~~~~~s~~e  268 (366)
                      ..++|+|++++.++...   .++++++.+|...++.+
T Consensus       217 ~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          217 GTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             BCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             cCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence            68999999999988642   58899999987665543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.79  E-value=3e-18  Score=154.50  Aligned_cols=213  Identities=15%  Similarity=0.060  Sum_probs=148.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc------------ccc-------ccccccceEEEc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN------------EHM-------MEDMFCHEFHLV   82 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~------------~~~-------~~~~~~v~~~~~   82 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|...            ...       ......+.++.+
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGAD---------IIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVL   84 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEc
Confidence            5678999999999999999999999999         999988421            100       111234678999


Q ss_pred             cCCChhHHHhhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cC-CCceeEEE
Q 044498           83 DLRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NG-VMSLTFFF  147 (366)
Q Consensus        83 D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~  147 (366)
                      |++|.+++.++++       ++|++||+||..........+   .+..+++|+.++.++++++..    .+ ..  +||+
T Consensus        85 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g--~iv~  162 (280)
T 3pgx_A           85 DVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGG--SIVV  162 (280)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE--EEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC--EEEE
Confidence            9999998887764       799999999976532222222   344588999999999988744    23 34  8999


Q ss_pred             EecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH------HHHHHHHHhC
Q 044498          148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP------AAFSRKAVTS  218 (366)
Q Consensus       148 ~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~------~~~~~~~~~~  218 (366)
                      +||...+..               ..+...|+.+|.+.+.+.+.++.+   +++++..++++.+      ..........
T Consensus       163 isS~~~~~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~  227 (280)
T 3pgx_A          163 VSSSAGLKA---------------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFAR  227 (280)
T ss_dssp             ECCGGGTSC---------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHH
T ss_pred             EcchhhccC---------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhc
Confidence            999765432               223567999999999999999887   5788888754432      1111111110


Q ss_pred             C----CCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          219 T----DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       219 ~----~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .    ..+.. ...... .+.+++|+|++++.++...    .++++++.+|.
T Consensus       228 ~~~~~~~~~~-~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          228 HPSFVHSFPP-MPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             CGGGGGGSCC-BTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             Cchhhhhhhh-cccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            1    11111 111222 3889999999999998643    58899998775

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=3.4e-19  Score=160.79  Aligned_cols=211  Identities=12%  Similarity=0.033  Sum_probs=149.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccc---cceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMF---CHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~---~v~~~~~D~~~~~~l~~   92 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      ...   .+.++.+|++|.+++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGAN---------VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQ   75 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHH
Confidence            5678999999999999999999999999         99999876432111      011   46889999999988877


Q ss_pred             hhc-------CCCEEEEcccccCCcc----c---cccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEeccccc
Q 044498           93 MTS-------GVDNMSNLAADMGGMG----F---IQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIY  154 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~----~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vy  154 (366)
                      +++       ++|++||+||......    .   ...+....+++|+.++.++++++...    + .  +||++||...+
T Consensus        76 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g--~iv~isS~~~~  152 (280)
T 1xkq_A           76 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G--EIVNVSSIVAG  152 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C--EEEEECCGGGS
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C--cEEEecCcccc
Confidence            664       6999999999754211    1   11223456889999999999887653    3 5  89999997665


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHH-------------HHh
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRK-------------AVT  217 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~-------------~~~  217 (366)
                      ...              ..+...|+.+|...+.+.+.++.+   +++++..++++.+ ..+...             ...
T Consensus       153 ~~~--------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  218 (280)
T 1xkq_A          153 PQA--------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA  218 (280)
T ss_dssp             SSC--------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred             CCC--------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHH
Confidence            321              023567999999999999998865   4789888865533 111111             111


Q ss_pred             CCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCcEEecCCCcc
Q 044498          218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREPLNIGSDEMV  264 (366)
Q Consensus       218 ~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~~~~  264 (366)
                      ..      ........+.+++|+|++++.++...     .++.+++.+|..+
T Consensus       219 ~~------~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          219 SH------KECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             HC------TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HH------HcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            00      01112234789999999999998532     5789999887543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.79  E-value=1.3e-18  Score=155.68  Aligned_cols=210  Identities=12%  Similarity=0.020  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--c---cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--M---EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--~---~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+  |+||++++++|+++|++         |++++|+.....  .   .......++.+|+++.+++.+++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~   78 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAE---------LAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF   78 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCE---------EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCE---------EEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHH
Confidence            45789999999  99999999999999999         999998762110  0   01112478999999999888766


Q ss_pred             c-------CCCEEEEcccccCC----cc----ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGG----MG----FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~----~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       ++|++||+||....    ..    ....+....+++|+.++.++++++.+.-.+..+||++||...+..   
T Consensus        79 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---  155 (265)
T 1qsg_A           79 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---  155 (265)
T ss_dssp             HHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB---
T ss_pred             HHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC---
Confidence            4       68999999997532    11    122234556899999999999999875211128999999765421   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEe
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~  225 (366)
                                  ..+...|+.+|...+.+.+.++.++   ++++..++++.+           ..+...+.. ..+    
T Consensus       156 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~p----  218 (265)
T 1qsg_A          156 ------------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEA-VTP----  218 (265)
T ss_dssp             ------------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHH-HST----
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHh-cCC----
Confidence                        1235679999999999999998876   788888865432           111111111 111    


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                           ...+.+++|+|++++.++...    .++.+++.+|..++
T Consensus       219 -----~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          219 -----IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             -----TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             -----CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence                 123678999999999998642    47899999886543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.79  E-value=1.7e-18  Score=150.76  Aligned_cols=195  Identities=10%  Similarity=0.046  Sum_probs=144.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc---CCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS---GVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~---~~d   98 (366)
                      +++++|||||+|+||++++++|.++|++         |++++|+..              +|++|++++.++++   ++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id   61 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTI---------VHVASRQTG--------------LDISDEKSVYHYFETIGAFD   61 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEE---------EEEESGGGT--------------CCTTCHHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEecCCcc--------------cCCCCHHHHHHHHHHhCCCC
Confidence            5578999999999999999999999999         999987643              89999998888765   799


Q ss_pred             EEEEcccccCCcc----ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           99 NMSNLAADMGGMG----FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        99 ~vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                      ++||+||......    ....+....+++|+.++.++++++.+.-.+..++|++||...+..               ..+
T Consensus        62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------~~~  126 (223)
T 3uce_A           62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV---------------VAN  126 (223)
T ss_dssp             EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC---------------CTT
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC---------------CCC
Confidence            9999999763211    112233455889999999999999875222238999999765432               234


Q ss_pred             CCchHHHHHHHHHHHHHHHHHcC-CcEEEeCCCcH---------HH----HHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          175 QDAYGLEKLATEGLCKHYTKDFE-IECRLVGEKAP---------AA----FSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~~-~~~~i~r~~~~---------~~----~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                      ...|+.+|...+.+.+.++.+++ +++..+.++.+         ..    +...... .         .....+..++|+
T Consensus       127 ~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~dv  196 (223)
T 3uce_A          127 TYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQS-H---------LPVGKVGEASDI  196 (223)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHH-H---------STTCSCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhh-c---------CCCCCccCHHHH
Confidence            56899999999999999999876 77766644322         11    1111111 1         112346789999


Q ss_pred             HHHHHHHHhcC--CCCcEEecCCCcc
Q 044498          241 VEGVLRLIKSD--FREPLNIGSDEMV  264 (366)
Q Consensus       241 a~~~~~~l~~~--~~~~~~i~~~~~~  264 (366)
                      |++++.++...  .++++++.+|..+
T Consensus       197 A~~~~~l~~~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          197 AMAYLFAIQNSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHccCCCCCCcEEEecCCeec
Confidence            99999999764  5889999988654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.79  E-value=7.9e-18  Score=150.59  Aligned_cols=208  Identities=13%  Similarity=0.021  Sum_probs=149.5

Q ss_pred             CCCeEEEEcCCCc--hhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGF--IPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~--iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +++++|||||+|+  ||++++++|+++|++         |++++|+.......       ....+.++.+|+++.+++.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   76 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGAR---------LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIET   76 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---------EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHH
Confidence            5678999999998  999999999999999         99998875321111       11257899999999998887


Q ss_pred             hhc-------CCCEEEEcccccCC----cccc---ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGG----MGFI---QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~----~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +++       ++|++||+||....    ....   ..+....+++|+.++.++++++...-.+..+||++||...+..  
T Consensus        77 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--  154 (266)
T 3oig_A           77 CFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV--  154 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC--
T ss_pred             HHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc--
Confidence            664       68999999997541    1111   1223445889999999999999876332238999999765432  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEE
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEM  224 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i  224 (366)
                                   ..+...|+.+|++.+.+.+.++.++   ++++..+.++.+           ..+...+.. ..    
T Consensus       155 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~----  216 (266)
T 3oig_A          155 -------------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEE-RA----  216 (266)
T ss_dssp             -------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHH-HS----
T ss_pred             -------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHh-cC----
Confidence                         2235679999999999999988875   678877754432           122222222 11    


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                           ....+...+|+|++++.++...    .++++++.+|..
T Consensus       217 -----~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          217 -----PLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             -----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -----CCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence                 1123578999999999998652    588999988754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=6.6e-19  Score=154.78  Aligned_cols=203  Identities=14%  Similarity=0.071  Sum_probs=146.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+......    ...++.+|+++.+++.++++      
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYT---------VLNIDLSANDQAD----SNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEE---------EEEEESSCCTTSS----EEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEecCcccccc----ccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999         9999998654321    23677899999988777654      


Q ss_pred             ---CCCEEEEcccccCCccc----cccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 ---GVDNMSNLAADMGGMGF----IQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                         ++|++||+||.......    ...+....+++|+.++.++++++.+.-.+..+||++||...+..            
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------  136 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP------------  136 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC------------
Confidence               79999999996542111    12233556889999999999998874211128999999766532            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHcC-----CcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDFE-----IECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~-----~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                         ..+...|+.+|...+.+.+.++.+++     +++..++++.+ ..+...... ..         ....++..+|+|+
T Consensus       137 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~---------~~~~~~~~~dvA~  203 (236)
T 1ooe_A          137 ---TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP-NA---------DHSSWTPLSFISE  203 (236)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST-TC---------CGGGCBCHHHHHH
T ss_pred             ---CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC-Cc---------cccccCCHHHHHH
Confidence               22356799999999999999988764     88888877654 333332221 11         1123567899999


Q ss_pred             HHHHHHhc-----CCCCcEEecCCC
Q 044498          243 GVLRLIKS-----DFREPLNIGSDE  262 (366)
Q Consensus       243 ~~~~~l~~-----~~~~~~~i~~~~  262 (366)
                      ++..++..     -.++.+++.++.
T Consensus       204 ~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          204 HLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHHcCCCcccccccEEEEecCC
Confidence            99866632     147788877654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.78  E-value=5.7e-18  Score=153.11  Aligned_cols=199  Identities=10%  Similarity=-0.015  Sum_probs=145.9

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------cccccceEEEccCC
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------EDMFCHEFHLVDLR   85 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------~~~~~v~~~~~D~~   85 (366)
                      |..+++++|||||+|.||++++++|+++|++         |++++|+......             .....+.++.+|++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   75 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGAN---------VALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR   75 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCE---------EEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC
Confidence            3346689999999999999999999999999         9999998753211             11235689999999


Q ss_pred             ChhHHHhhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecc
Q 044498           86 VMDNCLRMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSA  151 (366)
Q Consensus        86 ~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~  151 (366)
                      +.+++.++++       ++|++||+||..........+   ....+++|+.++.++++++...    +..  ++|++||.
T Consensus        76 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~iv~isS~  153 (285)
T 3sc4_A           76 DGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNP--HILTLSPP  153 (285)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSC--EEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEECCh
Confidence            9998887764       799999999976432222222   2445779999999999988765    445  89999996


Q ss_pred             cccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCC-c-HHHHHHHHHhCCCCeEEec
Q 044498          152 CIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEK-A-PAAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       152 ~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~-~-~~~~~~~~~~~~~~~~i~~  226 (366)
                      ..+...              ..+...|+.+|++.+.+.+.++.+   .++++..+.++ . ...+.........+     
T Consensus       154 ~~~~~~--------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~~-----  214 (285)
T 3sc4_A          154 IRLEPK--------------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEA-----  214 (285)
T ss_dssp             CCCSGG--------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCCC-----
T ss_pred             hhccCC--------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcccccc-----
Confidence            543211              123467999999999999999887   47888888776 3 34455544432111     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                          ...+...+|+|++++.++..+
T Consensus       215 ----~~r~~~pedvA~~~~~l~s~~  235 (285)
T 3sc4_A          215 ----MARSRKPEVYADAAYVVLNKP  235 (285)
T ss_dssp             ----CTTCBCTHHHHHHHHHHHTSC
T ss_pred             ----ccCCCCHHHHHHHHHHHhCCc
Confidence                123567999999999999765

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.78  E-value=1.2e-18  Score=156.41  Aligned_cols=206  Identities=17%  Similarity=0.077  Sum_probs=147.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |+++++.......       .....+.++.+|++|.+++.+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~  100 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAA---------VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAI  100 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5678999999999999999999999999         9998766532211       11234678999999999888776


Q ss_pred             c-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                      +       ++|++||+||..........   +....+++|+.++.++++++...  +..  ++|++||....-.      
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g--~iv~isS~~~~~~------  172 (271)
T 3v2g_A          101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGG--RIITIGSNLAELV------  172 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTC--EEEEECCGGGTCC------
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC--EEEEEeChhhccC------
Confidence            5       79999999997643222222   33456889999999999999876  334  8999998532110      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-H-------HHHHHHhCCCCeEEecCCcce
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-A-------FSRKAVTSTDNFEMWGDGKQT  231 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~-------~~~~~~~~~~~~~i~~~~~~~  231 (366)
                              +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+. .       ....... .         ...
T Consensus       173 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~-~---------~~~  234 (271)
T 3v2g_A          173 --------PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRE-R---------IAT  234 (271)
T ss_dssp             --------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHH-T---------CTT
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHh-c---------CCC
Confidence                    12346689999999999999988876   7888887554331 0       1111111 1         111


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+...+|+|+++..++...    .++++++.+|.
T Consensus       235 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          235 GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            23678999999999998542    58899998774

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.78  E-value=2.6e-18  Score=152.16  Aligned_cols=210  Identities=14%  Similarity=0.032  Sum_probs=142.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc-----
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      |++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++     
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   71 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHK---------VIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999999         99999875432111   11246889999999998888764     


Q ss_pred             --CCCEEEEcccccCC-ccc---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 --GVDNMSNLAADMGG-MGF---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 --~~d~vi~~a~~~~~-~~~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                        ++|++||+||.... ...   ...+....+++|+.++.++++++.    +.+..  +||++||...+..         
T Consensus        72 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~~~~---------  140 (248)
T 3asu_A           72 WCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG--HIINIGSTAGSWP---------  140 (248)
T ss_dssp             TCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSC---------
T ss_pred             CCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--eEEEEccchhccC---------
Confidence              68999999997521 111   122345568899999988888876    34556  9999999765421         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH--HHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA--AFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                            ..+...|+.+|...+.+.+.++.++   ++++..++++.+.  .+...... ...-.. .........+..+|+
T Consensus       141 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~-~~~~~~-~~~~~~~~~~~p~dv  212 (248)
T 3asu_A          141 ------YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFK-GDDGKA-EKTYQNTVALTPEDV  212 (248)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------CCBCHHHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhccc-CchHHH-HHHHhccCCCCHHHH
Confidence                  2235689999999999999988875   7888888766542  33221111 000000 000011224689999


Q ss_pred             HHHHHHHHhcC---CCCcEEecCC
Q 044498          241 VEGVLRLIKSD---FREPLNIGSD  261 (366)
Q Consensus       241 a~~~~~~l~~~---~~~~~~i~~~  261 (366)
                      |++++.++..+   .++.+.+.++
T Consensus       213 A~~v~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          213 SEAVWWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHHHHHSCTTCCCCEEEECCT
T ss_pred             HHHHHHHhcCCccceeeEEEEccc
Confidence            99999999764   3556666543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.78  E-value=4.9e-18  Score=152.06  Aligned_cols=204  Identities=12%  Similarity=0.076  Sum_probs=146.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |+++.+......       ......+.++.+|+++.+++.+++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~---------v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~   95 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFN---------IGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVL   95 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            4578999999999999999999999999         877654432211       112235689999999999888776


Q ss_pred             c-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHH-----HcCCCceeEEEEecccccCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAAR-----MNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~-----~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +       ++|++||+||.......   ...+....+++|+.++.++++++.     +.+..  +||++||...+..   
T Consensus        96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  170 (267)
T 4iiu_A           96 EHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGG--RIITLSSVSGVMG---  170 (267)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--EEEEECCHHHHHC---
T ss_pred             HHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc--EEEEEcchHhccC---
Confidence            4       79999999997643222   222345568899999999998874     44455  8999999654422   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH--------HHHHHHHHhCCCCeEEecCC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP--------AAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~--------~~~~~~~~~~~~~~~i~~~~  228 (366)
                                  ..+...|+.+|.+.+.+.+.++.++   ++++..++++.+        ......... ..+       
T Consensus       171 ------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~p-------  230 (267)
T 4iiu_A          171 ------------NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMS-MIP-------  230 (267)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHH-TCT-------
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHh-cCC-------
Confidence                        1235679999999999998888776   788877754322        223333332 111       


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                        ...+..++|+|+++..++...    .++++++.+|
T Consensus       231 --~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          231 --MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence              123678999999999998652    5889999876

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.78  E-value=3.2e-18  Score=153.08  Aligned_cols=217  Identities=9%  Similarity=-0.065  Sum_probs=151.0

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .+++++|||||+|.||++++++|+++|++         |++++|+......        .....+.++.+|++|.+++.+
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~   76 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAA---------VAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRA   76 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHH
Confidence            36789999999999999999999999999         9999987643211        111236889999999988777


Q ss_pred             hhc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +++       ++|++||+||..........   +....+++|+.++.++++++...    +..  +||++||...+..  
T Consensus        77 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~--  152 (265)
T 3lf2_A           77 FAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA--AIVCVNSLLASQP--  152 (265)
T ss_dssp             HHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE--EEEEEEEGGGTSC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe--EEEEECCcccCCC--
Confidence            653       68999999997543222222   23456889999999999988653    333  8999999765422  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEE----------
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEM----------  224 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i----------  224 (366)
                                   ..+...|+.+|...+.+.+.++.++   ++++..+.++.+ ..+.............          
T Consensus       153 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (265)
T 3lf2_A          153 -------------EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLA  219 (265)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHH
T ss_pred             -------------CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHh
Confidence                         2235679999999999999988876   788877765543 2333322210000000          


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .........+...+|+|++++.++...    .++++++.+|..
T Consensus       220 ~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          220 RNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             HHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             hccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            000012234678999999999998642    578899988753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.78  E-value=6.9e-19  Score=157.90  Aligned_cols=218  Identities=12%  Similarity=0.025  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |+++++.......       .....+.++.+|++|.+++.+++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   87 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAK---------VVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLF   87 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            5688999999999999999999999999         9988765433211       12235688999999999888776


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                      +       ++|++||+||........   ..+....+++|+.++.++++++...-.+..++|++||......        
T Consensus        88 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  159 (270)
T 3is3_A           88 DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF--------  159 (270)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC--------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC--------
Confidence            4       789999999976432222   2233456899999999999999876322238999999642100        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCC----C------eEEecCCcc
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTD----N------FEMWGDGKQ  230 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~----~------~~i~~~~~~  230 (366)
                            +..+...|+.+|...+.+.+.++.++   ++++..+.++.+ ..+.........    .      .........
T Consensus       160 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (270)
T 3is3_A          160 ------SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP  233 (270)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC
Confidence                  22346789999999999999998875   788888755432 222221110000    0      000001112


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+...+|+|+++..++...    .++++++.+|.
T Consensus       234 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          234 LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            234678999999999998542    58899998774

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.78  E-value=2.2e-19  Score=161.12  Aligned_cols=205  Identities=16%  Similarity=0.036  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|++ .|++         |++++|+......      .....+.++.+|+++.+++.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~   73 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGD---------VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALR   73 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSE---------EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCe---------EEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHH
Confidence            568999999999999999999999 8999         9999987543211      01234689999999999888776


Q ss_pred             c-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC-CC--
Q 044498           95 S-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ-LD--  161 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~-~~--  161 (366)
                      +       ++|+|||+||........   ..+....+.+|+.++.++++++.+.-.+..+||++||...+..... .|  
T Consensus        74 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~  153 (276)
T 1wma_A           74 DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPEL  153 (276)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHH
T ss_pred             HHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhH
Confidence            5       799999999976422110   1233556899999999999999876321128999999766532100 00  


Q ss_pred             ------CCccccc-----------------CCCCCCCCchHHHHHHHHHHHHHHHHH-------cCCcEEEeCCCcHHHH
Q 044498          162 ------TDVKESE-----------------AWPAEPQDAYGLEKLATEGLCKHYTKD-------FEIECRLVGEKAPAAF  211 (366)
Q Consensus       162 ------~~~~e~~-----------------~~~~~p~~~Y~~sK~~~E~~l~~~~~~-------~~~~~~i~r~~~~~~~  211 (366)
                            ..+.|++                 ..+..|...|+.+|++.+.+++.++.+       .++++..++++.+..-
T Consensus       154 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~  233 (276)
T 1wma_A          154 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  233 (276)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             HhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccC
Confidence                  0001111                 012235689999999999999988776       4789988877654110


Q ss_pred             HHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          212 SRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       212 ~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      +   ..         .    ..+.+++|+|++++.++..+
T Consensus       234 ~---~~---------~----~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          234 M---AG---------P----KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             T---TC---------T----TCSBCHHHHTHHHHHHHSCC
T ss_pred             c---CC---------c----cccCChhHhhhhHhhhhcCc
Confidence            0   00         0    13678999999999998643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.78  E-value=1.3e-18  Score=156.10  Aligned_cols=201  Identities=14%  Similarity=0.026  Sum_probs=135.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYG---------VALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999         99999876532211   12356899999999998887765   


Q ss_pred             ----CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHHc----C--CCceeEEEEecccccCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARMN----G--VMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~--~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                          ++|++||+||...... .   ...+....+++|+.++.++++++...    +  ..  +||++||...+.      
T Consensus        98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g--~IV~isS~~~~~------  169 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGG--RIINNGSISATS------  169 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE--EEEEECCSSTTS------
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCc--EEEEECchhhcC------
Confidence                7999999999754211 1   12223456889999988888776543    3  23  899999975542      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                               +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+...... ... .. ........+..+
T Consensus       170 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~-~~-~~~~~~~~~~~p  237 (272)
T 4dyv_A          170 ---------PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA-GVP-QA-DLSIKVEPVMDV  237 (272)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CH
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc-cch-hh-hhcccccCCCCH
Confidence                     22345679999999999999988874   677777765533 233322221 111 00 011123347899


Q ss_pred             HHHHHHHHHHHhcC
Q 044498          238 DECVEGVLRLIKSD  251 (366)
Q Consensus       238 ~D~a~~~~~~l~~~  251 (366)
                      +|+|++++.++..+
T Consensus       238 edvA~~v~fL~s~~  251 (272)
T 4dyv_A          238 AHVASAVVYMASLP  251 (272)
T ss_dssp             HHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999999875

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=1.8e-18  Score=155.09  Aligned_cols=223  Identities=12%  Similarity=0.033  Sum_probs=151.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhc----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......  ...++.++.+|++|.+++.++++    
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGAR---------VVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999         99999875432111  11236889999999998887764    


Q ss_pred             ---CCCEEEEcccccCCcc-ccc---cCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccc-cCCCCCCCCCc
Q 044498           96 ---GVDNMSNLAADMGGMG-FIQ---SNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACI-YPEFKQLDTDV  164 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~v-yg~~~~~~~~~  164 (366)
                         ++|++||+||...... ...   .+....+++|+.++.++++++...   +..  +||++||... ++.        
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g--~iv~isS~~~~~~~--------  148 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQG--NVINISSLVGAIGQ--------  148 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEECCHHHHHCC--------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC--EEEEEcCccccCCC--------
Confidence               7999999999753211 111   223556889999999999888642   235  8999999643 321        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCe-E-Ee--cCCcceeeeee
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNF-E-MW--GDGKQTRSLTF  236 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~-~-i~--~~~~~~~~~i~  236 (366)
                              .+...|+.+|...+.+.+.++.+   +++++.+++++.+ ..+........... . +.  ........+..
T Consensus       149 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  220 (270)
T 1yde_A          149 --------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQ  220 (270)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBC
T ss_pred             --------CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcC
Confidence                    12457999999999999998876   4899988876644 22322221100000 0 00  00011223678


Q ss_pred             HHHHHHHHHHHHhcC---CCCcEEecCCCcccHHHHHH
Q 044498          237 IDECVEGVLRLIKSD---FREPLNIGSDEMVSINEMAE  271 (366)
Q Consensus       237 v~D~a~~~~~~l~~~---~~~~~~i~~~~~~s~~el~~  271 (366)
                      .+|+|+++..++...   .++.+++.+|..+.+...+.
T Consensus       221 p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~~  258 (270)
T 1yde_A          221 PAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCKAS  258 (270)
T ss_dssp             HHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-----
T ss_pred             HHHHHHHHHHHcccCCCcCCCEEEECCCeecccCcCcc
Confidence            999999999988643   57899999887666544433

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.78  E-value=6e-18  Score=148.48  Aligned_cols=195  Identities=14%  Similarity=0.021  Sum_probs=138.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +|+++|||||+|+||++++++|+++|++         |++++|+......       .....+.++.+|+++.+++.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   71 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYA---------LALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFS   71 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHH
Confidence            3678999999999999999999999999         9999997653211       12235688999999999988877


Q ss_pred             c-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      +       ++|++||+||.......   ...+....+++|+.++.++++++...   +..  ++|++||...+..     
T Consensus        72 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~ii~~sS~~~~~~-----  144 (235)
T 3l77_A           72 KKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGG--LALVTTSDVSARL-----  144 (235)
T ss_dssp             C-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEECCGGGSSC-----
T ss_pred             HHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--cEEEEecchhccc-----
Confidence            5       79999999997643222   22233556889999999999988652   233  6777777543321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                                ......|+.+|++.+.+.+.+..+. ++++..++++.+..-+   .. .    ... ......+...+|+
T Consensus       145 ----------~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~---~~-~----~~~-~~~~~~~~~p~dv  205 (235)
T 3l77_A          145 ----------IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYF---GG-S----KPG-KPKEKGYLKPDEI  205 (235)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSST---TT-C----CSC-CCGGGTCBCHHHH
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccc---cc-c----cCC-cccccCCCCHHHH
Confidence                      1224579999999999998875543 7888888766542111   01 0    001 1112257889999


Q ss_pred             HHHHHHHHhcC
Q 044498          241 VEGVLRLIKSD  251 (366)
Q Consensus       241 a~~~~~~l~~~  251 (366)
                      |+++..++..+
T Consensus       206 a~~v~~l~~~~  216 (235)
T 3l77_A          206 AEAVRCLLKLP  216 (235)
T ss_dssp             HHHHHHHHTSC
T ss_pred             HHHHHHHHcCC
Confidence            99999999875

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.78  E-value=6.8e-18  Score=152.59  Aligned_cols=205  Identities=10%  Similarity=-0.006  Sum_probs=147.1

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--cc---cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MM---EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~---~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+  |+||+++++.|+++|++         |++++|+....  ..   .....+.++.+|+++.+++.+++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   90 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQ---------LAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLK   90 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHH
Confidence            45789999999  99999999999999999         99999876310  00   01113678999999999887766


Q ss_pred             c-------CCCEEEEcccccCC----c---cccccCcchhhhhhHHHHHHHHHHHHHcC---CCceeEEEEecccccCCC
Q 044498           95 S-------GVDNMSNLAADMGG----M---GFIQSNHSVIMYKNTTISFDMLEAARMNG---VMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~r~I~~SS~~vyg~~  157 (366)
                      +       ++|++||+||....    .   .....+....+++|+.++.++++++...-   ..  +||++||...+.. 
T Consensus        91 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g--~iv~isS~~~~~~-  167 (285)
T 2p91_A           91 KFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNG--AIVTLSYYGAEKV-  167 (285)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCC--EEEEEECGGGTSB-
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--EEEEEccchhccC-
Confidence            4       78999999997532    0   11122334568999999999999997752   24  8999999755421 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeE
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFE  223 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~  223 (366)
                                    ..+...|+.+|.+.+.+.+.++.++   ++++..++++.+           ..+...+.. ..+  
T Consensus       168 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~p--  230 (285)
T 2p91_A          168 --------------VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTK-VNP--  230 (285)
T ss_dssp             --------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHH-HST--
T ss_pred             --------------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHh-cCC--
Confidence                          1235679999999999999988775   788888865432           111111111 111  


Q ss_pred             EecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          224 MWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       224 i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                             ...+.+++|+|++++.++...    .++.|++.+|.
T Consensus       231 -------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          231 -------FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             -------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             -------CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence                   123568999999999998542    47889998875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.78  E-value=4.5e-19  Score=160.01  Aligned_cols=209  Identities=13%  Similarity=0.099  Sum_probs=149.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|+++.+++.++++   
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   99 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLG---------VVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAAN   99 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999         99999876532211   12346899999999998887764   


Q ss_pred             ---CCCEEEEcccccCCcccc------cc---CcchhhhhhHHHHHHHHHHHHHc----------CCCceeEEEEecccc
Q 044498           96 ---GVDNMSNLAADMGGMGFI------QS---NHSVIMYKNTTISFDMLEAARMN----------GVMSLTFFFVSSACI  153 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~------~~---~~~~~~~~nv~~~~~ll~a~~~~----------~~~~~r~I~~SS~~v  153 (366)
                         ++|++||+++..+.....      ..   +....+++|+.++.++++++...          +..  +||++||...
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~  177 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERG--ALVLTASIAG  177 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCE--EEEEECCGGG
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCe--EEEEEecccc
Confidence               589999994433221111      11   23566889999999999887632          233  8999999765


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHH--------HHHHhCCCC
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFS--------RKAVTSTDN  221 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~--------~~~~~~~~~  221 (366)
                      +..               ..+...|+.+|++.+.+.+.++.++   ++++..+.++.+ ..+.        ..+.. ..+
T Consensus       178 ~~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~  241 (281)
T 3ppi_A          178 YEG---------------QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAA-NIP  241 (281)
T ss_dssp             TSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHH-TCC
T ss_pred             cCC---------------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHh-cCC
Confidence            532               2245689999999999999888875   678877765433 2221        11222 111


Q ss_pred             eEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCccc
Q 044498          222 FEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVS  265 (366)
Q Consensus       222 ~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s  265 (366)
                        +      ...+.+++|+|++++.++...  .++++++.+|..++
T Consensus       242 --~------~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          242 --F------PKRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             --S------SSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             --C------CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence              0      134688999999999999764  68899999887654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.78  E-value=2.6e-18  Score=150.88  Aligned_cols=194  Identities=9%  Similarity=-0.051  Sum_probs=135.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .++++|||||+|+||++++++|+++|++         |++++|+.......   ...++.++.+|+++.+++.++++   
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   72 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQ---------VSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAV   72 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999976532211   11246899999999988877654   


Q ss_pred             ----CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 ----GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                          ++|++||+||.......   ...+....+++|+.++.++++++...   ...  ++|++||...+..         
T Consensus        73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~iv~isS~~~~~~---------  141 (235)
T 3l6e_A           73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGG--VLANVLSSAAQVG---------  141 (235)
T ss_dssp             HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE--EEEEECCEECCSS---------
T ss_pred             HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--EEEEEeCHHhcCC---------
Confidence                68999999997542211   22234556899999999999888653   122  7999999654322         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                            ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+. .+......           .....+...+|+|
T Consensus       142 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA  204 (235)
T 3l6e_A          142 ------KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAA  204 (235)
T ss_dssp             ------CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHH
T ss_pred             ------CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHH
Confidence                  1224579999999999999998875   5777777554331 11110000           0112468899999


Q ss_pred             HHHHHHHhcCC
Q 044498          242 EGVLRLIKSDF  252 (366)
Q Consensus       242 ~~~~~~l~~~~  252 (366)
                      ++++.++..+.
T Consensus       205 ~~v~~l~~~~~  215 (235)
T 3l6e_A          205 AYMLDALEARS  215 (235)
T ss_dssp             HHHHHHTCCCS
T ss_pred             HHHHHHHhCCC
Confidence            99999997653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.78  E-value=1.6e-18  Score=155.91  Aligned_cols=214  Identities=14%  Similarity=0.027  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAH---------VILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIE  102 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Confidence            5688999999999999999999999999         99999976543211      23356899999999988777664


Q ss_pred             ------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            ++|++||+||..........+   ....+++|+.++.++++++.    +.+..  ++|++||...+.       
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~Iv~isS~~~~~-------  173 (275)
T 4imr_A          103 RAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWG--RVVSIGSINQLR-------  173 (275)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTS-------
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc--EEEEECCHHhCC-------
Confidence                  799999999975432222223   34458899999999998874    34555  899999976553       


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-e-EEecCCcceeeeee
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-F-EMWGDGKQTRSLTF  236 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~-~i~~~~~~~~~~i~  236 (366)
                              +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+.......... . .+.........+..
T Consensus       174 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  245 (275)
T 4imr_A          174 --------PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGR  245 (275)
T ss_dssp             --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBC
T ss_pred             --------CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcC
Confidence                    12234569999999999999998886   788877765533 2222211110000 0 00000001123567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      .+|+|++++.++...    .++++++.+|
T Consensus       246 pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          246 PEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            999999999998653    5888998776

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.78  E-value=2.2e-18  Score=158.29  Aligned_cols=205  Identities=10%  Similarity=-0.059  Sum_probs=137.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......        ....+.++.+|+++.+++.++
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~---------Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~   77 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCK---------VAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMA   77 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHH
Confidence            4578999999999999999999999999         99999986532211        112568899999999988877


Q ss_pred             hc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHcC----------CCceeEEEEecccc
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMNG----------VMSLTFFFVSSACI  153 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~~----------~~~~r~I~~SS~~v  153 (366)
                      ++       ++|++||+||.........   .+....+++|+.++.++++++...-          ..  +||++||...
T Consensus        78 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g--~iV~isS~a~  155 (319)
T 3ioy_A           78 ADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGG--HVVNTASMAA  155 (319)
T ss_dssp             HHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCC--EEEEECCGGG
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCc--EEEEeccccc
Confidence            64       6799999999754322222   2334568999999999998876542          33  7999999766


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-----eEE
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-----FEM  224 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-----~~i  224 (366)
                      +...               .....|+.+|.+.+.+.+.++.++   +++++++.++.+ ..+..........     ...
T Consensus       156 ~~~~---------------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  220 (319)
T 3ioy_A          156 FLAA---------------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPV  220 (319)
T ss_dssp             TCCC---------------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---------------------
T ss_pred             ccCC---------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccch
Confidence            5432               124579999998888777776654   789988876654 2222211100000     000


Q ss_pred             ----ecCC-cceeeeeeHHHHHHHHHHHHhcCC
Q 044498          225 ----WGDG-KQTRSLTFIDECVEGVLRLIKSDF  252 (366)
Q Consensus       225 ----~~~~-~~~~~~i~v~D~a~~~~~~l~~~~  252 (366)
                          .... ......+.++|+|+.++.+++.+.
T Consensus       221 ~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          221 DKTAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             --------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence                0000 011112789999999999998753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.78  E-value=1.6e-17  Score=150.17  Aligned_cols=216  Identities=16%  Similarity=0.037  Sum_probs=149.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc---------------c-------ccccccceE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH---------------M-------MEDMFCHEF   79 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~---------------~-------~~~~~~v~~   79 (366)
                      +++++|||||+|.||++++++|+++|++         |++++|+....               .       ......+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGAD---------IIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVT   80 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe---------EEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEE
Confidence            5688999999999999999999999999         99998863210               0       011235688


Q ss_pred             EEccCCChhHHHhhhc-------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHHc----C-CCce
Q 044498           80 HLVDLRVMDNCLRMTS-------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARMN----G-VMSL  143 (366)
Q Consensus        80 ~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~  143 (366)
                      +.+|+++.+++.++++       ++|++||+||...... .   ...+....+++|+.++.++++++...    + ..  
T Consensus        81 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g--  158 (286)
T 3uve_A           81 AEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGG--  158 (286)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--
T ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCc--
Confidence            9999999998887764       7999999999764322 1   12233456899999999999887653    2 33  


Q ss_pred             eEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHH-----HH
Q 044498          144 TFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFS-----RK  214 (366)
Q Consensus       144 r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~-----~~  214 (366)
                      ++|++||...+..               ..+...|+.+|...+.+.+.++.++   ++++..+.++.+ ..+.     ..
T Consensus       159 ~iv~isS~~~~~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~  223 (286)
T 3uve_A          159 SIILTSSVGGLKA---------------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFK  223 (286)
T ss_dssp             EEEEECCGGGTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHH
T ss_pred             EEEEECchhhccC---------------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhh
Confidence            8999999765432               2235679999999999999988874   678777754322 1110     01


Q ss_pred             HHhCC-CCeE------E--ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          215 AVTST-DNFE------M--WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       215 ~~~~~-~~~~------i--~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ..... ....      .  ...... ..+...+|+|++++.++...    .++++++.+|..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          224 MFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            11100 0000      0  011111 45789999999999998643    5889999988654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.78  E-value=1.1e-17  Score=152.05  Aligned_cols=209  Identities=13%  Similarity=-0.005  Sum_probs=150.1

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|  +||++++++|+++|++         |++++|+......     .....+.++.+|++|.+++.+++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAE---------VALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHH
Confidence            567899999998  9999999999999999         9999988532111     11123578999999999888776


Q ss_pred             c-------CCCEEEEcccccCC----c---cccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGG----M---GFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||....    .   .....+....+++|+.++.++++++...-.+..++|++||...+..    
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~----  175 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV----  175 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC----
T ss_pred             HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC----
Confidence            4       68999999997632    1   1122234556889999999999999875322238999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~~  226 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+           ..+...... ..+     
T Consensus       176 -----------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~p-----  238 (296)
T 3k31_A          176 -----------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKY-NSP-----  238 (296)
T ss_dssp             -----------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHH-HST-----
T ss_pred             -----------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHh-cCC-----
Confidence                       2235679999999999999998876   678777754322           111222221 111     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                          ...+...+|+|++++.++...    .++++++.+|..+
T Consensus       239 ----~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          239 ----LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             ----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ----CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence                123567899999999998652    5889999988644

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.77  E-value=8.6e-19  Score=158.55  Aligned_cols=214  Identities=11%  Similarity=0.066  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC---CCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH---YSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~---~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l   90 (366)
                      +++++|||||+|+||++++++|+++|+   +         |++.+|+.......        ....+.++.+|++|.+++
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v  102 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMK---------LILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKI  102 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSE---------EEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCce---------EEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHH
Confidence            567899999999999999999999987   7         99999876532211        123568899999999988


Q ss_pred             Hhhhc-------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccC
Q 044498           91 LRMTS-------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        91 ~~~~~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg  155 (366)
                      .++++       ++|++||+||...... .   ...+....+++|+.++.++++++    ++.+..  +||++||...+.
T Consensus       103 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~IV~isS~~~~~  180 (287)
T 3rku_A          103 KPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSG--DIVNLGSIAGRD  180 (287)
T ss_dssp             HHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEECChhhcC
Confidence            87764       5899999999754211 1   22234556899999999999988    344556  899999976542


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcce
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQT  231 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~  231 (366)
                      .               ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+...... ....... .....
T Consensus       181 ~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~-~~~~~  243 (287)
T 3rku_A          181 A---------------YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYR-GNEEQAK-NVYKD  243 (287)
T ss_dssp             C---------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTT-TCHHHHH-HHHTT
T ss_pred             C---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccccccc-CcHHHHH-Hhhcc
Confidence            1               2235679999999999999999884   788888866543 222211111 0000000 00000


Q ss_pred             eeeeeHHHHHHHHHHHHhcCC----CCcEEecCCCc
Q 044498          232 RSLTFIDECVEGVLRLIKSDF----REPLNIGSDEM  263 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~~----~~~~~i~~~~~  263 (366)
                      ...+..+|+|++++.++..+.    ++++.+.+++.
T Consensus       244 ~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          244 TTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            113479999999999997653    67788877664

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.77  E-value=3.9e-18  Score=154.26  Aligned_cols=199  Identities=14%  Similarity=0.048  Sum_probs=142.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|++|.+++.+++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~   97 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAH---------VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFV   97 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence            5689999999999999999999999999         99999976432111       1124688999999998877765


Q ss_pred             c-------CCCEEEEc-ccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNL-AADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~-a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+ |+.... ....   .+....+++|+.++.++++++...   +..  +||++||...+..    
T Consensus        98 ~~~~~~~g~iD~li~naag~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g--~iv~isS~~~~~~----  170 (286)
T 1xu9_A           98 AQAGKLMGGLDMLILNHITNTSL-NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNG--SIVVVSSLAGKVA----  170 (286)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCCC-CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEEEEGGGTSC----
T ss_pred             HHHHHHcCCCCEEEECCccCCCC-ccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCC--EEEEECCcccccC----
Confidence            4       79999999 564421 1111   223456889999999988887542   235  8999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                 ..+...|+.+|...+.+.+.++.++     ++++++++++.+ ..+...... +         ......
T Consensus       171 -----------~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-~---------~~~~~~  229 (286)
T 1xu9_A          171 -----------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS-G---------IVHMQA  229 (286)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC-G---------GGGGGC
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcc-c---------cccCCC
Confidence                       2235689999999999998887765     788888866544 333322221 1         111246


Q ss_pred             eeHHHHHHHHHHHHhcCCCCcEE
Q 044498          235 TFIDECVEGVLRLIKSDFREPLN  257 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~~~~~~~  257 (366)
                      ++.+|+|+.++.++..+..++|.
T Consensus       230 ~~~~~vA~~i~~~~~~~~~~~~~  252 (286)
T 1xu9_A          230 APKEECALEIIKGGALRQEEVYY  252 (286)
T ss_dssp             BCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHhcCCceEEe
Confidence            78999999999999876555443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.77  E-value=1.2e-17  Score=151.13  Aligned_cols=208  Identities=13%  Similarity=0.073  Sum_probs=145.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC-ccccc-------cccccceEEEccCCC----hhH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK-NEHMM-------EDMFCHEFHLVDLRV----MDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~-~~~~~-------~~~~~v~~~~~D~~~----~~~   89 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+. .....       .....+.++.+|+++    .++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~---------V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYR---------VVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCE---------EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCe---------EEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHH
Confidence            5678999999999999999999999999         99999986 32110       112346789999999    887


Q ss_pred             HHhhhc-------CCCEEEEcccccCCccc-----cc--------cCcchhhhhhHHHHHHHHHHHHHcCCC--------
Q 044498           90 CLRMTS-------GVDNMSNLAADMGGMGF-----IQ--------SNHSVIMYKNTTISFDMLEAARMNGVM--------  141 (366)
Q Consensus        90 l~~~~~-------~~d~vi~~a~~~~~~~~-----~~--------~~~~~~~~~nv~~~~~ll~a~~~~~~~--------  141 (366)
                      +.++++       ++|++||+||.......     ..        .+....+.+|+.++.++++++...-.+        
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           93 CEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            776654       79999999997642211     11        122345889999999999888654211        


Q ss_pred             ceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-------HHH
Q 044498          142 SLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-------AAF  211 (366)
Q Consensus       142 ~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-------~~~  211 (366)
                      ..+||++||...+..               ..+...|+.+|++.+.+.+.++.++   ++++..++++.+       ...
T Consensus       173 ~g~iv~isS~~~~~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~  237 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQP---------------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEE  237 (288)
T ss_dssp             CEEEEEECCTTTTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCTTSCHHH
T ss_pred             CeEEEEEecccccCC---------------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCccccChHH
Confidence            128999999765432               2235679999999999999988875   788887755432       111


Q ss_pred             HHHHHhCCCCeEEecCCcceeee-eeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          212 SRKAVTSTDNFEMWGDGKQTRSL-TFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       212 ~~~~~~~~~~~~i~~~~~~~~~~-i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ...+.. ..+         ...+ ...+|+|++++.++...    .++.+++.+|..
T Consensus       238 ~~~~~~-~~p---------~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          238 KDKWRR-KVP---------LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             HHHHHH-TCT---------TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHh-hCC---------CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            112221 111         1124 67999999999998642    578888887754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.77  E-value=1.9e-17  Score=151.84  Aligned_cols=216  Identities=15%  Similarity=0.106  Sum_probs=149.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-----------c-------ccccccceEEEcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-----------M-------MEDMFCHEFHLVD   83 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-----------~-------~~~~~~v~~~~~D   83 (366)
                      +++++|||||+|+||+++++.|+++|++         |++++|.....           .       ......+.++.+|
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~---------Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  115 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGAD---------IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQAD  115 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCe---------EEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECC
Confidence            5578999999999999999999999999         99988753210           0       0112346789999


Q ss_pred             CCChhHHHhhhc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEE
Q 044498           84 LRVMDNCLRMTS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFV  148 (366)
Q Consensus        84 ~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~  148 (366)
                      ++|.+++.++++       ++|++||+||........   ..+....+++|+.++.++++++..    .+ ..  +||++
T Consensus       116 v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g--~Iv~i  193 (317)
T 3oec_A          116 VRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGG--SVIFV  193 (317)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCE--EEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCC--EEEEE
Confidence            999998887764       799999999976432222   223345689999999998888754    22 23  79999


Q ss_pred             ecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHH------HHHhC
Q 044498          149 SSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSR------KAVTS  218 (366)
Q Consensus       149 SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~------~~~~~  218 (366)
                      ||...+..               ..+...|+.+|...+.+.+.++.++   |+++..++++.+ ..+..      .+...
T Consensus       194 sS~~~~~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  258 (317)
T 3oec_A          194 SSTVGLRG---------------APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPH  258 (317)
T ss_dssp             CCGGGSSC---------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTT
T ss_pred             CcHHhcCC---------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhh
Confidence            99765432               1235679999999999999998885   788888866543 22211      11110


Q ss_pred             CCCe------EEecC-CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          219 TDNF------EMWGD-GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       219 ~~~~------~i~~~-~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ....      ..+.. ......+.+++|+|+++..++...    .++++++.+|..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          259 LENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             CSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            0000      00000 011146789999999999998542    588999998864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.77  E-value=1.9e-18  Score=156.84  Aligned_cols=209  Identities=13%  Similarity=-0.018  Sum_probs=149.3

Q ss_pred             CCCeEEEEcCCCc--hhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGF--IPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~--iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+  ||++++++|+++|++         |++++|+.....     ......+.++.+|++|.+++.+++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  100 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAE---------LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVF  100 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCE---------EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHH
Confidence            5678999999998  999999999999999         999998743111     111124678999999999888776


Q ss_pred             c-------CCCEEEEcccccCC----cc---ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGG----MG---FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~----~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||....    ..   ....+....+++|+.++.++++++...-.+..++|++||...+..    
T Consensus       101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----  176 (293)
T 3grk_A          101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV----  176 (293)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB----
T ss_pred             HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC----
Confidence            4       79999999997531    11   112233456889999999999998874322238999999765432    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-H----------HHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-A----------FSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~----------~~~~~~~~~~~~~i~~  226 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+. .          +...... .       
T Consensus       177 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~-------  237 (293)
T 3grk_A          177 -----------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEY-N-------  237 (293)
T ss_dssp             -----------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHH-H-------
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHh-c-------
Confidence                       1235679999999999999988875   6788777554331 1          1111111 1       


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                        .....+...+|+|++++.++...    .++++++.+|..+
T Consensus       238 --~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          238 --APLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             --STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             --CCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence              11233667999999999998652    5889999988643

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.77  E-value=1.5e-17  Score=149.94  Aligned_cols=207  Identities=11%  Similarity=-0.001  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCCc--hhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc----cccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGF--IPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH----MMEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~--iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~----~~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++||||||+|+  ||.+++++|+++|++         |++++|.....    .......+.++.+|+++.+++.++++
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAE---------LAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCE---------EEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCE---------EEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH
Confidence            5578999999977  999999999999999         99999886211    11122346899999999998877653


Q ss_pred             -------CCCEEEEcccccCCc----c----ccccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCC
Q 044498           96 -------GVDNMSNLAADMGGM----G----FIQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~----~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~  157 (366)
                             ++|++||+||.....    .    ....+....+++|+.++.++++++...   ...  +||++||...+.. 
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g--~iv~isS~~~~~~-  172 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNA--SMVALTYIGAEKA-  172 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTC--EEEEEECGGGTSC-
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEeccccccC-
Confidence                   589999999976421    0    122233456889999999999988764   334  8999999765432 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-----------HHHHHHHHhCCCCeE
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-----------AAFSRKAVTSTDNFE  223 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~  223 (366)
                                    ..+...|+.+|.+.+.+.+.++.+   .++++..+.++.+           ..+...... ..   
T Consensus       173 --------------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~---  234 (280)
T 3nrc_A          173 --------------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAM-VS---  234 (280)
T ss_dssp             --------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHH-HS---
T ss_pred             --------------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHh-cC---
Confidence                          234567999999999999988877   4788887754332           122222221 11   


Q ss_pred             EecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          224 MWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       224 i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                            ....+..++|+|++++.++...    .++++++.+|..+
T Consensus       235 ------p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          235 ------PLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             ------TTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             ------CCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence                  1123577999999999998652    5889999988643

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.77  E-value=2.2e-17  Score=150.33  Aligned_cols=216  Identities=16%  Similarity=0.016  Sum_probs=149.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc------------------cccccccceEEEcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH------------------MMEDMFCHEFHLVD   83 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~------------------~~~~~~~v~~~~~D   83 (366)
                      +++++|||||+|.||.+++++|+++|++         |++++|+....                  .......+.++.+|
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   97 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGAD---------IIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVD   97 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECC
Confidence            5678999999999999999999999999         99998863210                  01112356889999


Q ss_pred             CCChhHHHhhhc-------CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEE
Q 044498           84 LRVMDNCLRMTS-------GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFF  147 (366)
Q Consensus        84 ~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~  147 (366)
                      ++|.+++.++++       ++|++||+||...... .   ...+....+++|+.++.++++++...    + ..  +||+
T Consensus        98 v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g--~Iv~  175 (299)
T 3t7c_A           98 VRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGG--SIVF  175 (299)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCE--EEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc--EEEE
Confidence            999998887764       7999999999764322 1   12233556899999999999987553    2 44  8999


Q ss_pred             EecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH-----HHHHHhC
Q 044498          148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF-----SRKAVTS  218 (366)
Q Consensus       148 ~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~-----~~~~~~~  218 (366)
                      +||...+..               ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+     .......
T Consensus       176 isS~~~~~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  240 (299)
T 3t7c_A          176 TSSIGGLRG---------------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRP  240 (299)
T ss_dssp             ECCGGGTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCT
T ss_pred             ECChhhccC---------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhh
Confidence            999765432               2235679999999999999998886   788877754432 111     0011110


Q ss_pred             CC-CeEE--------ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          219 TD-NFEM--------WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       219 ~~-~~~i--------~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .. ....        ...... ..+...+|+|++++.++...    .++++++.+|..+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          241 DLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             TSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            00 0000        001111 34678999999999998653    5889999988644

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.77  E-value=1.2e-18  Score=156.06  Aligned_cols=208  Identities=8%  Similarity=0.021  Sum_probs=148.6

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~   91 (366)
                      +++++|||||+  |+||.+++++|+++|++         |++++|+......        .....+.++.+|+++.+++.
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~---------v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~   89 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAA---------VAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCE   89 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCE---------EEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCe---------EEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHH
Confidence            66899999999  99999999999999999         9999887654310        11235688999999999887


Q ss_pred             hhhc-------CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCC
Q 044498           92 RMTS-------GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        92 ~~~~-------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~  157 (366)
                      ++++       ++|++||+||........   ..+....+++|+.++.++++++    ++.+..  ++|++||...+...
T Consensus        90 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~~~  167 (267)
T 3gdg_A           90 KLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTG--SLVITASMSGHIAN  167 (267)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCc--eEEEEccccccccC
Confidence            7654       689999999976432222   2233456889999999998887    444555  89999997543221


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH---------HHHHHHHHhCCCCeEEec
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP---------AAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~  226 (366)
                                   ...+...|+.+|+..+.+.+.++.+++  +++..+.++.+         ......+.          
T Consensus       168 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----------  224 (267)
T 3gdg_A          168 -------------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWH----------  224 (267)
T ss_dssp             -------------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHH----------
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHH----------
Confidence                         112456799999999999999999875  45555533322         11111111          


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .......+..++|+|++++.++...    .++++++.+|..
T Consensus       225 ~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          225 SMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             TTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             hcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            1122345778999999999998653    578999988754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.77  E-value=2e-17  Score=148.94  Aligned_cols=215  Identities=15%  Similarity=0.086  Sum_probs=147.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc------------ccc-------ccccccceEEEc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN------------EHM-------MEDMFCHEFHLV   82 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~------------~~~-------~~~~~~v~~~~~   82 (366)
                      +++++|||||+|.||.+++++|+++|++         |++++|...            ...       ......+.++.+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGAD---------IIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVV   80 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCE---------EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC
Confidence            5678999999999999999999999999         999988421            100       111234678999


Q ss_pred             cCCChhHHHhhhc-------CCCEEEEcccccCCccccc---cCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEE
Q 044498           83 DLRVMDNCLRMTS-------GVDNMSNLAADMGGMGFIQ---SNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFF  147 (366)
Q Consensus        83 D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~  147 (366)
                      |++|.+++.++++       ++|++||+||.........   .+.+..+++|+.++.++++++...    + ..  +||+
T Consensus        81 D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g--~iv~  158 (277)
T 3tsc_A           81 DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGG--SIIL  158 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--EEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC--EEEE
Confidence            9999998887664       6999999999765322222   233455899999999988886542    3 34  8999


Q ss_pred             EecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH-----HHH---H
Q 044498          148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF-----SRK---A  215 (366)
Q Consensus       148 ~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~-----~~~---~  215 (366)
                      +||...+..               ..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+     ...   .
T Consensus       159 isS~~~~~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~  223 (277)
T 3tsc_A          159 ISSAAGMKM---------------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQA  223 (277)
T ss_dssp             ECCGGGTSC---------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHH
T ss_pred             EccHhhCCC---------------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhc
Confidence            999765432               1235679999999999999998875   678877755432 111     111   1


Q ss_pred             HhCCCC-eEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          216 VTSTDN-FEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       216 ~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ...... .......... .+...+|+|++++.++...    .++++++.+|..
T Consensus       224 ~~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          224 METNPQLSHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HHTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccccHHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            110110 0011111112 3789999999999998653    588999988753

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.77  E-value=5.7e-18  Score=150.15  Aligned_cols=194  Identities=17%  Similarity=0.095  Sum_probs=139.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------ccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +++++|||||+|+||.+++++|+++|++         |++++|+.......         ....+.++.+|+++.+++.+
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   76 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYR---------VVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADT   76 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCE---------EEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHH
Confidence            5678999999999999999999999999         99999876532111         11456899999999988877


Q ss_pred             hhc-------CCCEEEEcccccCCccc--cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGF--IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +++       ++|++||+||.......  ...+....+++|+.++.++++++.    +.+..  ++|++||...+.    
T Consensus        77 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g--~iv~isS~~~~~----  150 (250)
T 3nyw_A           77 EIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNG--YIFNVASRAAKY----  150 (250)
T ss_dssp             HHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECC---------
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe--EEEEEccHHhcC----
Confidence            654       68999999997543212  112234568899999999888874    34555  899999965432    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                 +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+......   .       .....++
T Consensus       151 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~-------~~~~~~~  209 (250)
T 3nyw_A          151 -----------GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT---P-------FKDEEMI  209 (250)
T ss_dssp             -------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC---C-------SCGGGSB
T ss_pred             -----------CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC---C-------cccccCC
Confidence                       12235689999999999999988875   788888866654 333322211   1       1123478


Q ss_pred             eHHHHHHHHHHHHhcC
Q 044498          236 FIDECVEGVLRLIKSD  251 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~  251 (366)
                      ..+|+|+++..++..+
T Consensus       210 ~p~dva~~v~~l~s~~  225 (250)
T 3nyw_A          210 QPDDLLNTIRCLLNLS  225 (250)
T ss_dssp             CHHHHHHHHHHHHTSC
T ss_pred             CHHHHHHHHHHHHcCC
Confidence            8999999999999865

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.77  E-value=5e-19  Score=157.30  Aligned_cols=208  Identities=14%  Similarity=0.062  Sum_probs=145.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe-CCCcccc------ccccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD-WNKNEHM------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~-r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++++|||||+|+||++++++|+++|++         |+++. |+.....      ......+.++.+|+++.+.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~---------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGAL---------VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEAL   75 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCe---------EEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHH
Confidence            35688999999999999999999999999         88864 4333211      11223467889999999877766


Q ss_pred             hc-------------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccC
Q 044498           94 TS-------------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYP  155 (366)
Q Consensus        94 ~~-------------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg  155 (366)
                      ++             .+|++||+||..........+   ....+++|+.++.++++++...  +..  ++|++||...+.
T Consensus        76 ~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~iv~isS~~~~~  153 (255)
T 3icc_A           76 YSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS--RIINISSAATRI  153 (255)
T ss_dssp             HHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE--EEEEECCGGGTS
T ss_pred             HHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCC--EEEEeCChhhcc
Confidence            53             289999999975432221222   2445789999999999999765  233  899999976543


Q ss_pred             CCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH----------HHHHHHHhCCCCe
Q 044498          156 EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA----------AFSRKAVTSTDNF  222 (366)
Q Consensus       156 ~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~----------~~~~~~~~~~~~~  222 (366)
                      ..               .....|+.+|++.+.+.+.++.++   ++++..+.++.+.          ..........   
T Consensus       154 ~~---------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---  215 (255)
T 3icc_A          154 SL---------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTI---  215 (255)
T ss_dssp             CC---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHT---
T ss_pred             CC---------------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhcc---
Confidence            21               234679999999999999988875   7888777443220          0111111101   


Q ss_pred             EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          223 EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       223 ~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                            .....+..++|+|+++..++...    .++++++.+|..
T Consensus       216 ------~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          216 ------SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             ------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             ------CCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence                  11234678999999999998542    588999988753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.76  E-value=1.9e-17  Score=152.58  Aligned_cols=207  Identities=14%  Similarity=0.069  Sum_probs=147.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe-CCCccccc-------cccccceEEEccCCChh-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD-WNKNEHMM-------EDMFCHEFHLVDLRVMD-----   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~-r~~~~~~~-------~~~~~v~~~~~D~~~~~-----   88 (366)
                      +++++|||||+|+||++++++|+++|++         |++++ |+......       .....+.++.+|+++.+     
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~---------Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~  115 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYA---------VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS  115 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccc
Confidence            4578999999999999999999999999         99998 76532111       11234688999999988     


Q ss_pred             ------------HHHhhhc-------CCCEEEEcccccCCcccc-----------------ccCcchhhhhhHHHHHHHH
Q 044498           89 ------------NCLRMTS-------GVDNMSNLAADMGGMGFI-----------------QSNHSVIMYKNTTISFDML  132 (366)
Q Consensus        89 ------------~l~~~~~-------~~d~vi~~a~~~~~~~~~-----------------~~~~~~~~~~nv~~~~~ll  132 (366)
                                  ++.++++       ++|++||+||........                 ..+....+.+|+.++.+++
T Consensus       116 ~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~  195 (328)
T 2qhx_A          116 GADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  195 (328)
T ss_dssp             -----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence                        7777664       799999999975422111                 1222345889999999888


Q ss_pred             HHHHH----cC------CCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCc
Q 044498          133 EAARM----NG------VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIE  199 (366)
Q Consensus       133 ~a~~~----~~------~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~  199 (366)
                      +++..    .+      ..  +||++||...+..               ..+...|+.+|++.+.+.+.++.++   +++
T Consensus       196 ~~~~~~m~~~~~~~~~~~g--~IV~isS~~~~~~---------------~~~~~~Y~asKaal~~l~~~la~el~~~gIr  258 (328)
T 2qhx_A          196 KAFAHRVAGTPAKHRGTNY--SIINMVDAMTNQP---------------LLGYTIYTMAKGALEGLTRSAALELAPLQIR  258 (328)
T ss_dssp             HHHHHHHHHSCGGGSCSCE--EEEEECCTTTTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHhcCCcCCCCCc--EEEEECchhhccC---------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence            88764    33      45  8999999765432               2235679999999999999988875   788


Q ss_pred             EEEeCCCcH-------HHHHHHHHhCCCCeEEecCCccee-eeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          200 CRLVGEKAP-------AAFSRKAVTSTDNFEMWGDGKQTR-SLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       200 ~~i~r~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~-~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      +..++++.+       ......+.. ..+         .. .+...+|+|++++.++...    .++++++.+|..+
T Consensus       259 vn~v~PG~v~T~~~~~~~~~~~~~~-~~p---------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          259 VNGVGPGLSVLVDDMPPAVWEGHRS-KVP---------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             EEEEEESSBSCCCCSCHHHHHHHHT-TCT---------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEEEecCcccCCccccHHHHHHHHh-hCC---------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            887754432       122222221 111         11 3567999999999998542    5788999887543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.76  E-value=8.9e-18  Score=150.00  Aligned_cols=206  Identities=12%  Similarity=0.004  Sum_probs=147.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......   ....+.++.+|++|.+++.++++   
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGAS---------LVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEAL   75 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999         99999876432111   11346789999999998877654   


Q ss_pred             ----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcC--CCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNG--VMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~--~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                          ++|++||+||..........+   .+..+++|+.++.++++++...-  ..  +||++||...++ .         
T Consensus        76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g--~iv~isS~~~~~-~---------  143 (263)
T 2a4k_A           76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGG--SLVLTGSVAGLG-A---------  143 (263)
T ss_dssp             HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC--EEEEECCCTTCC-H---------
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC--EEEEEecchhcC-C---------
Confidence                589999999976422122222   24568899999999999987752  34  899999987652 1         


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                            .+...|+.+|...+.+.+.++.++   ++++.+++++.+         ..+...... ..         ....+
T Consensus       144 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~---------p~~~~  207 (263)
T 2a4k_A          144 ------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG-AS---------PLGRA  207 (263)
T ss_dssp             ------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHH-TS---------TTCSC
T ss_pred             ------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHh-cC---------CCCCC
Confidence                  113579999999999998888765   788888865433         111111111 11         11236


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .+.+|+|++++.++...    .++.+++.+|..+
T Consensus       208 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          208 GRPEEVAQAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence            78999999999998652    5788999887644

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.76  E-value=2.5e-18  Score=153.57  Aligned_cols=214  Identities=20%  Similarity=0.107  Sum_probs=144.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+......      .....+.++.+|+++.+++.++++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   76 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTA---------IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVD   76 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            4578999999999999999999999999         9999987543211      112346789999999988777654


Q ss_pred             -------CCCEEEEccccc-CCccc---cccCcchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADM-GGMGF---IQSNHSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~-~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||.. .....   ...+....+++|+.++.++++++.+.    +..  +||++||...+...   
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~~---  151 (262)
T 1zem_A           77 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG--RIVNTASMAGVKGP---  151 (262)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHSCC---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc--EEEEEcchhhccCC---
Confidence                   799999999965 21111   12233456889999999988887653    455  89999997654321   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHH-------HhC---C-CC--e-
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKA-------VTS---T-DN--F-  222 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~-------~~~---~-~~--~-  222 (366)
                                  .+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+....       ...   . .+  . 
T Consensus       152 ------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T 1zem_A          152 ------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVA  219 (262)
T ss_dssp             ------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHH
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHH
Confidence                        124579999999999998887764   788888866533 1121111       000   0 00  0 


Q ss_pred             EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          223 EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       223 ~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      ...........+...+|+|++++.++...    .++.+.+.+|
T Consensus       220 ~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          220 QQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            00000011123678999999999998642    4677777654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.75  E-value=2.7e-18  Score=151.71  Aligned_cols=205  Identities=14%  Similarity=0.075  Sum_probs=127.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHH---hhh--
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCL---RMT--   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~---~~~--   94 (366)
                      .+++++|||||+|+||++++++|.+ |+.         |++++|+....... ...++.++.+|+++.....   +.+  
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~---------v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHI---------VYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKN   72 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSE---------EEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTT
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCe---------EEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHh
Confidence            3568899999999999999999987 888         99999876432211 1234688999998875421   122  


Q ss_pred             -cCCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCccc
Q 044498           95 -SGVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        95 -~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                       .++|++||+||.......   ...+....+++|+.++.++++++.    +.+ .  ++|++||...+...         
T Consensus        73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g--~iv~isS~~~~~~~---------  140 (245)
T 3e9n_A           73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-G--CVIYINSGAGNGPH---------  140 (245)
T ss_dssp             CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C--EEEEEC-----------------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C--eEEEEcCcccccCC---------
Confidence             369999999997643211   112234568899999887777764    334 4  89999997665421         


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                            .+...|+.+|.+.+.+.+.++.+   .++++..++++.+ ..+....... .     ........++.++|+|+
T Consensus       141 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~-----~~~~~~~~~~~p~dvA~  208 (245)
T 3e9n_A          141 ------PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS-Q-----GTNFRPEIYIEPKEIAN  208 (245)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHH
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh-h-----hcccccccCCCHHHHHH
Confidence                  23567999999999999998887   4788888876654 3333322221 1     11112234789999999


Q ss_pred             HHHHHHhcC-CCCcEEec
Q 044498          243 GVLRLIKSD-FREPLNIG  259 (366)
Q Consensus       243 ~~~~~l~~~-~~~~~~i~  259 (366)
                      +++.+++.+ .++++++.
T Consensus       209 ~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          209 AIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             HHHHHHTSCTTEEEEEEE
T ss_pred             HHHHHHcCCCccceeeeE
Confidence            999999876 45666654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.75  E-value=1.8e-17  Score=149.00  Aligned_cols=207  Identities=12%  Similarity=0.007  Sum_probs=146.8

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc--cc---cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH--MM---EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~--~~---~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++||||||+  |+||++++++|+++|++         |++++|+....  ..   .....+.++.+|+++.+++.+++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~---------V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~   75 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT---------LAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLY   75 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCE---------EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHH
Confidence            45789999999  99999999999999999         99999886411  00   01113688999999998887766


Q ss_pred             c-------CCCEEEEcccccCC----c---cccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGG----M---GFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||....    .   .....+....+++|+.++.++++++...-.+..+||++||...+..    
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----  151 (275)
T 2pd4_A           76 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----  151 (275)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----
T ss_pred             HHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC----
Confidence            4       68999999997532    0   1112233556889999999999999875111128999999654321    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~~  226 (366)
                                 ..+...|+.+|.+.+.+.+.++.++   ++++..++++.+           ..+...+.. ..+     
T Consensus       152 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~p-----  214 (275)
T 2pd4_A          152 -----------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEI-NAP-----  214 (275)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHH-HST-----
T ss_pred             -----------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHh-cCC-----
Confidence                       1235579999999999999988876   788888865432           111111111 111     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                          ...+...+|+|++++.++...    .++.+++.+|.
T Consensus       215 ----~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          215 ----LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             ----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ----cCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence                123567999999999998542    57788888775

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.75  E-value=1.1e-17  Score=150.87  Aligned_cols=202  Identities=15%  Similarity=0.054  Sum_probs=137.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|++|.+++.+++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  102 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYS---------VVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALF  102 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHH
Confidence            5678999999999999999999999999         99999876532211       1112478999999999887766


Q ss_pred             c-------CCCEEEEcccccCCc-cc---cccCcchhhhhhHHHHHHHHHHHHH----cC--CCceeEEEEecccccCCC
Q 044498           95 S-------GVDNMSNLAADMGGM-GF---IQSNHSVIMYKNTTISFDMLEAARM----NG--VMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~-~~---~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~~r~I~~SS~~vyg~~  157 (366)
                      +       ++|++||+||..... ..   ...+.+..+++|+.++.++.+++..    .+  ..  +||++||...+.  
T Consensus       103 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g--~IV~isS~~~~~--  178 (281)
T 4dry_A          103 AAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGG--RIINNGSISAQT--  178 (281)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE--EEEEECCGGGTC--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCc--EEEEECCHHhCC--
Confidence            4       689999999975321 11   1223344688999998877776654    32  33  899999975432  


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                   +..+...|+.+|.+.+.+.+.++.++   ++++..+.++.+ ..+......   ...-.........
T Consensus       179 -------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  242 (281)
T 4dry_A          179 -------------PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST---GVLQANGEVAAEP  242 (281)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C---EEECTTSCEEECC
T ss_pred             -------------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc---hhhhhhhcccccC
Confidence                         22345679999999999999988774   778877765433 223222221   0000001112234


Q ss_pred             eeeHHHHHHHHHHHHhcCC
Q 044498          234 LTFIDECVEGVLRLIKSDF  252 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~~  252 (366)
                      +...+|+|++++.++..+.
T Consensus       243 ~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          243 TIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSCT
T ss_pred             CCCHHHHHHHHHHHhCCCc
Confidence            7789999999999998764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.75  E-value=1.7e-17  Score=147.36  Aligned_cols=204  Identities=13%  Similarity=-0.012  Sum_probs=142.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhhc--
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      ++++|||||+|+||++++++|+++|  +.         |++++|+.......   ....+.++.+|++|.+++.++++  
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~---------v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTV---------VYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAA   72 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCE---------EEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeE---------EEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH
Confidence            4789999999999999999999986  56         88888875432211   12356889999999998887764  


Q ss_pred             -----CCCEEEEcccccCCcc-c---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMG-F---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                           ++|++||+||...... .   ...+....+++|+.++.++++++    ++.+ .  ++|++||...+..      
T Consensus        73 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g--~iv~isS~~~~~~------  143 (254)
T 3kzv_A           73 VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-G--NVVFVSSDACNMY------  143 (254)
T ss_dssp             HHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C--EEEEECCSCCCCS------
T ss_pred             HHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C--eEEEEcCchhccC------
Confidence                 7999999999753211 1   12233456889999999999888    4445 5  8999999755432      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCCcHH------------------HHHHHHHhCCCCeE
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-EIECRLVGEKAPA------------------AFSRKAVTSTDNFE  223 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~~~~------------------~~~~~~~~~~~~~~  223 (366)
                               ..+...|+.+|...+.+.+.++.++ ++++..+.++.+.                  .....+..      
T Consensus       144 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------  208 (254)
T 3kzv_A          144 ---------FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG------  208 (254)
T ss_dssp             ---------SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH------
T ss_pred             ---------CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH------
Confidence                     2345689999999999999998886 7888777554321                  11111111      


Q ss_pred             EecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCcEEecCCCc
Q 044498          224 MWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREPLNIGSDEM  263 (366)
Q Consensus       224 i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i~~~~~  263 (366)
                          ......+...+|+|++++.++...     .++.+++.+++.
T Consensus       209 ----~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          209 ----LKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             ----HHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             ----HHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence                011234678999999999998654     478888876653

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.75  E-value=8.4e-17  Score=140.41  Aligned_cols=205  Identities=12%  Similarity=0.022  Sum_probs=148.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc---CCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS---GVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~---~~d   98 (366)
                      .++++|||||++-||+++++.|.++|.+         |++.+|+...........+..+.+|++|+++++++++   ++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~---------Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD   80 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAE---------VVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLD   80 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCC
Confidence            6789999999999999999999999999         9999998765554445567899999999998888764   799


Q ss_pred             EEEEcccccCCcc-ccccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           99 NMSNLAADMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        99 ~vi~~a~~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                      ++||+||...+.. ....+.+..+++|+.++..+.+++.+.   +-.  ++|++||..-.-.               ...
T Consensus        81 iLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G--~IVnisS~~~~~~---------------~~~  143 (242)
T 4b79_A           81 VLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGG--SILNIASMYSTFG---------------SAD  143 (242)
T ss_dssp             EEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCE--EEEEECCGGGTSC---------------CSS
T ss_pred             EEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEEEeeccccCC---------------CCC
Confidence            9999999764321 111233455889999988877776542   123  8999999653221               122


Q ss_pred             CCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          175 QDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                      ...|+.+|.....+.+.++.++   |+++..+-|+.+           ......+.. ..+         ...+...+|+
T Consensus       144 ~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~-~~P---------lgR~g~peei  213 (242)
T 4b79_A          144 RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQ-RTP---------LARWGEAPEV  213 (242)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHH-TCT---------TCSCBCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHh-cCC---------CCCCcCHHHH
Confidence            4579999999999999988876   677766633322           122222222 111         1235668999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCC
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |.++++|+...    .++++.+.+|.
T Consensus       214 A~~v~fLaSd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          214 ASAAAFLCGPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCceEEECccH
Confidence            99999998542    58889988774

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.74  E-value=4.9e-17  Score=147.39  Aligned_cols=207  Identities=14%  Similarity=0.070  Sum_probs=146.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe-CCCccccc-------cccccceEEEccCCChh-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD-WNKNEHMM-------EDMFCHEFHLVDLRVMD-----   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~-r~~~~~~~-------~~~~~v~~~~~D~~~~~-----   88 (366)
                      +++++|||||+|+||++++++|+++|++         |++++ |+......       .....+.++.+|+++.+     
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~   78 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYA---------VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS   78 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe---------EEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccc
Confidence            5678999999999999999999999999         99999 76542111       11234688999999988     


Q ss_pred             ------------HHHhhhc-------CCCEEEEcccccCCcccc-----------------ccCcchhhhhhHHHHHHHH
Q 044498           89 ------------NCLRMTS-------GVDNMSNLAADMGGMGFI-----------------QSNHSVIMYKNTTISFDML  132 (366)
Q Consensus        89 ------------~l~~~~~-------~~d~vi~~a~~~~~~~~~-----------------~~~~~~~~~~nv~~~~~ll  132 (366)
                                  ++.++++       ++|++||+||........                 ..+....+.+|+.++.+++
T Consensus        79 ~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  158 (291)
T 1e7w_A           79 GADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  158 (291)
T ss_dssp             ----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHH
Confidence                        7777654       799999999975422111                 1223456889999999998


Q ss_pred             HHHHH----cC------CCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCc
Q 044498          133 EAARM----NG------VMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIE  199 (366)
Q Consensus       133 ~a~~~----~~------~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~  199 (366)
                      +++..    .+      ..  +||++||...+..               ..+...|+.+|...+.+.+.++.++   +++
T Consensus       159 ~~~~~~m~~~~~~~~~~~g--~Iv~isS~~~~~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  221 (291)
T 1e7w_A          159 KAFAHRVAGTPAKHRGTNY--SIINMVDAMTNQP---------------LLGYTIYTMAKGALEGLTRSAALELAPLQIR  221 (291)
T ss_dssp             HHHHHHHHTSCGGGSCSCE--EEEEECCTTTTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHhcCCCCCCCCc--EEEEEechhhcCC---------------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeE
Confidence            88764    23      34  8999999765432               2235679999999999999988775   688


Q ss_pred             EEEeCCCcHH-------HHHHHHHhCCCCeEEecCCccee-eeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          200 CRLVGEKAPA-------AFSRKAVTSTDNFEMWGDGKQTR-SLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       200 ~~i~r~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~-~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      +..+.++.+.       .+...+.. ..         ... .+...+|+|++++.++...    .++.+++.+|..+
T Consensus       222 vn~v~PG~v~T~~~~~~~~~~~~~~-~~---------p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          222 VNGVGPGLSVLVDDMPPAVWEGHRS-KV---------PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             EEEEEESSBCCGGGSCHHHHHHHHT-TC---------TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEEEeeCCccCCccCCHHHHHHHHh-hC---------CCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            8777654331       11111111 11         111 3567999999999998642    5788998887543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.74  E-value=3.1e-17  Score=145.01  Aligned_cols=201  Identities=16%  Similarity=0.136  Sum_probs=141.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccC--CChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDL--RVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~--~~~~~l~~   92 (366)
                      ++++++||||+|+||++++++|+++|++         |++++|+.......       ....+.++.+|+  ++.+++.+
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~   83 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGAS---------VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRE   83 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE---------EEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHH
Confidence            6789999999999999999999999999         99999886532111       113456777777  88877776


Q ss_pred             hhc-------CCCEEEEcccccCCccc----cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGF----IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~  157 (366)
                      +++       ++|++||+||.......    ...+....+++|+.++.++++++.    +.+..  ++|++||...+.. 
T Consensus        84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~iv~isS~~~~~~-  160 (247)
T 3i1j_A           84 LAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDA--SIAFTSSSVGRKG-  160 (247)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSE--EEEEECCGGGTSC-
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC--eEEEEcchhhcCC-
Confidence            553       79999999997532211    122334568899999999999884    34445  8999999754422 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCccee
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                                    ..+...|+.+|.+.+.+.+.++.++    ++++..+.++.+ ..+...... ..         ...
T Consensus       161 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~-~~---------~~~  216 (247)
T 3i1j_A          161 --------------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP-DE---------NPL  216 (247)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST-TS---------CGG
T ss_pred             --------------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc-cc---------Ccc
Confidence                          2335689999999999999988875    566766766544 334333322 11         112


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEe
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNI  258 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i  258 (366)
                      .+...+|+|++++.++...    .++.+++
T Consensus       217 ~~~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          217 NNPAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             GSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             CCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence            3467899999999998643    4555553

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.74  E-value=6.9e-17  Score=149.68  Aligned_cols=195  Identities=14%  Similarity=0.077  Sum_probs=142.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------cccccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------~~~~~v~~~~~D~~~~~   88 (366)
                      ++++||||||+|.||.+++++|+++|++         |++++|+......             .....+.++.+|++|.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~---------Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~  114 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGAN---------IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQ  114 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCE---------EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCE---------EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHH
Confidence            5578999999999999999999999999         9999988764211             11234678999999999


Q ss_pred             HHHhhhc-------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEeccccc
Q 044498           89 NCLRMTS-------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIY  154 (366)
Q Consensus        89 ~l~~~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vy  154 (366)
                      ++.++++       ++|++||+||..........   +.+..+++|+.++.++++++..    .+..  +||++||...+
T Consensus       115 ~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g--~IV~iSS~~~~  192 (346)
T 3kvo_A          115 QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVA--HILNISPPLNL  192 (346)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSC--EEEEECCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCC--EEEEECCHHHc
Confidence            8887764       79999999997643222222   2345689999999999998854    3455  89999997544


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCc-H-HHHHHHHHhCCCCeEEecCCcc
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKA-P-AAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~-~-~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      ...             +..+...|+.+|+..+.+.+.++.++  ++++..+.++. + ..+... +....         .
T Consensus       193 ~~~-------------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~-~~~~~---------~  249 (346)
T 3kvo_A          193 NPV-------------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDM-LGGPG---------I  249 (346)
T ss_dssp             CGG-------------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHH-HCC-----------C
T ss_pred             CCC-------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHh-hcccc---------c
Confidence            321             12345689999999999999998886  67777776662 3 333332 22111         1


Q ss_pred             eeeeeeHHHHHHHHHHHHhc
Q 044498          231 TRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~  250 (366)
                      ...+...+|+|++++.++..
T Consensus       250 ~~r~~~pedvA~~v~~L~s~  269 (346)
T 3kvo_A          250 ESQCRKVDIIADAAYSIFQK  269 (346)
T ss_dssp             GGGCBCTHHHHHHHHHHHTS
T ss_pred             cccCCCHHHHHHHHHHHHhc
Confidence            22356799999999999976

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.74  E-value=9.6e-17  Score=144.19  Aligned_cols=196  Identities=11%  Similarity=0.008  Sum_probs=139.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------cccccceEEEccCCCh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------EDMFCHEFHLVDLRVM   87 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------~~~~~v~~~~~D~~~~   87 (366)
                      .+++++|||||+|.||++++++|.++|++         |++++|+......             .....+.++.+|+++.
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   74 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGAN---------VAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREE   74 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            36789999999999999999999999999         9999988653211             0123467899999999


Q ss_pred             hHHHhhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccc
Q 044498           88 DNCLRMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACI  153 (366)
Q Consensus        88 ~~l~~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~v  153 (366)
                      +++.++++       ++|++||+||..........+   ....+++|+.++.++++++..    .+..  ++|++||...
T Consensus        75 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~  152 (274)
T 3e03_A           75 DQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP--HILTLAPPPS  152 (274)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC--EEEECCCCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc--eEEEECChHh
Confidence            98877654       799999999976432222222   244578999999999988765    3445  8999999654


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCC-cH-HHHHHHHHhCCCCeEEecCC
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEK-AP-AAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~-~~-~~~~~~~~~~~~~~~i~~~~  228 (366)
                      +...             +..+...|+.+|...+.+.+.++.++   ++++..+.++ .+ ..+. .... .         
T Consensus       153 ~~~~-------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-~~~~-~---------  208 (274)
T 3e03_A          153 LNPA-------------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-NMLP-G---------  208 (274)
T ss_dssp             CCHH-------------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------C---------
T ss_pred             cCCC-------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-hhcc-c---------
Confidence            3210             01235579999999999999988875   7888888776 33 2222 1111 1         


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      .....+...+|+|++++.++...
T Consensus       209 ~~~~~~~~pedvA~~v~~l~s~~  231 (274)
T 3e03_A          209 VDAAACRRPEIMADAAHAVLTRE  231 (274)
T ss_dssp             CCGGGSBCTHHHHHHHHHHHTSC
T ss_pred             ccccccCCHHHHHHHHHHHhCcc
Confidence            11123678999999999999764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.74  E-value=9.1e-17  Score=141.06  Aligned_cols=204  Identities=11%  Similarity=0.043  Sum_probs=144.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCChhHHHhhhc-----
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      +++||||||++.||+++++.|.++|++         |.+.+|+......  ....++.++.+|++|++++.++++     
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~---------V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   72 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDK---------VCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK   72 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999         9999987653221  223346789999999988777653     


Q ss_pred             --CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 --GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                        ++|++||+||..........+   .+..+++|+.++..+.+++.+.   +-.  ++|++||...+...          
T Consensus        73 ~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G--~IInisS~~~~~~~----------  140 (247)
T 3ged_A           73 LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG--RIINIASTRAFQSE----------  140 (247)
T ss_dssp             HSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--EEEEECCGGGTSCC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC--cEEEEeecccccCC----------
Confidence              799999999976543333333   3445889999988887766542   223  89999997543211          


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc--CCcEEEeCCCcH-----HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF--EIECRLVGEKAP-----AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~--~~~~~i~r~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                           .....|+.+|.....+.+.++.++  ++++..+.|+.+     ..+...... ..+         ...+...+|+
T Consensus       141 -----~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~~~~-~~P---------l~R~g~pedi  205 (247)
T 3ged_A          141 -----PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQEDCA-AIP---------AGKVGTPKDI  205 (247)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHHHHH-TST---------TSSCBCHHHH
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHHHHh-cCC---------CCCCcCHHHH
Confidence                 124579999999999999998887  466655543322     112222222 111         1235678999


Q ss_pred             HHHHHHHHhcC--CCCcEEecCCC
Q 044498          241 VEGVLRLIKSD--FREPLNIGSDE  262 (366)
Q Consensus       241 a~~~~~~l~~~--~~~~~~i~~~~  262 (366)
                      |.+++.|+...  .++++.+.+|.
T Consensus       206 A~~v~fL~s~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          206 SNMVLFLCQQDFITGETIIVDGGM  229 (247)
T ss_dssp             HHHHHHHHHCSSCCSCEEEESTTG
T ss_pred             HHHHHHHHhCCCCCCCeEEECcCH
Confidence            99999999754  58889998874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.73  E-value=2.3e-17  Score=148.05  Aligned_cols=210  Identities=10%  Similarity=-0.015  Sum_probs=138.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc---
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++|||||+|+||++++++|+++|++         |++++|+.......     ....+.++.+|++|.+++.++++   
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWS---------LVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            78999999999999999999999999         99999875432111     00246889999999998888765   


Q ss_pred             ----CCCEEEEcccccCC-cccc---ccCcchhhhhhHHHHHHHHHHHH----HcC-CCceeEEEEecccccCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGG-MGFI---QSNHSVIMYKNTTISFDMLEAAR----MNG-VMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~-~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~-~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                          ++|++||+||.... ....   ..+....+++|+.++.++++++.    +.+ ..  +||++||...+..      
T Consensus        93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~--~IV~isS~~~~~~------  164 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGA--SIVNLGSVAGKWP------  164 (272)
T ss_dssp             GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTC--EEEEECCGGGTSC------
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEeCCchhccC------
Confidence                46999999997532 1111   22334568899999887777664    333 32  7999999765432      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                               ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+.......... .. ............+
T Consensus       165 ---------~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~-~~~~~~~~~~~pe  233 (272)
T 2nwq_A          165 ---------YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQA-RY-DKTYAGAHPIQPE  233 (272)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHH
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchH-HH-HHhhccCCCCCHH
Confidence                     1235679999999999999988764   788888876544 3332211110000 00 0000001246899


Q ss_pred             HHHHHHHHHHhcCC---CCcEEecCC
Q 044498          239 ECVEGVLRLIKSDF---REPLNIGSD  261 (366)
Q Consensus       239 D~a~~~~~~l~~~~---~~~~~i~~~  261 (366)
                      |+|++++.++..+.   ++.+.+.++
T Consensus       234 dvA~~v~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          234 DIAETIFWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHHHHHhCCCccCccceEEEeec
Confidence            99999999997642   344555443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.73  E-value=9.5e-17  Score=142.57  Aligned_cols=208  Identities=12%  Similarity=0.019  Sum_probs=137.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc---cccceEEEccCCChhHHHh----hhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED---MFCHEFHLVDLRVMDNCLR----MTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~---~~~v~~~~~D~~~~~~l~~----~~~   95 (366)
                      |+++|||||+|+||++++++|+++|++         |++++|+........   ..+......|..+.+.+.+    .+.
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g   71 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHT---------VACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYG   71 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCE---------EEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHS
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999         999998754321110   0011222225444433222    123


Q ss_pred             CCCEEEEccccc-CCccccc---cCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 GVDNMSNLAADM-GGMGFIQ---SNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 ~~d~vi~~a~~~-~~~~~~~---~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      ++|++||+||.. .......   .+....+++|+.++.++++++.    +.+..  ++|++||...+..           
T Consensus        72 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~-----------  138 (254)
T 1zmt_A           72 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG--HIIFITSATPFGP-----------  138 (254)
T ss_dssp             CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCSTTTSC-----------
T ss_pred             CCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEECCcccccC-----------
Confidence            799999999975 2111111   2234568899999998888774    34556  8999999765432           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH----------HHHHHH---HHhCCCCeEEecCCcce
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP----------AAFSRK---AVTSTDNFEMWGDGKQT  231 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~----------~~~~~~---~~~~~~~~~i~~~~~~~  231 (366)
                          ..+...|+.+|...+.+.+.++.++   ++++..++++.+          ..+...   ...   .  + ......
T Consensus       139 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~---~--~-~~~~p~  208 (254)
T 1zmt_A          139 ----WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVA---H--V-KKVTAL  208 (254)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHH---H--H-HHHSSS
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHH---H--H-hccCCC
Confidence                1235679999999999999988775   799988876655          222110   000   0  0 000011


Q ss_pred             eeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          232 RSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+...+|+|++++.++...    .++.+++.+|.
T Consensus       209 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          209 QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            23678999999999998653    57889998775

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.72  E-value=3e-17  Score=148.05  Aligned_cols=216  Identities=12%  Similarity=0.024  Sum_probs=145.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc--
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      .+++++|||||+|+||++++++|+++|++         |++++|+......   .....+.++.+|+++.+++.++++  
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   73 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGAR---------VAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERC   73 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCE---------EEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999         9999987643221   112356889999999988777653  


Q ss_pred             -----CCCEEEEcccccCCcccccc--------CcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQS--------NHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~--------~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~  159 (366)
                           ++|++||+||..........        +.+..+++|+.++.++++++...   ...  ++|++||...+..   
T Consensus        74 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g--~iv~isS~~~~~~---  148 (281)
T 3zv4_A           74 LAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRG--SVVFTISNAGFYP---  148 (281)
T ss_dssp             HHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEECCGGGTSS---
T ss_pred             HHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--eEEEEecchhccC---
Confidence                 68999999997532111111        12445789999999998887542   124  8999999755421   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HHHHHH--------HHhCCCCe-EEecC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AAFSRK--------AVTSTDNF-EMWGD  227 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~~~~~--------~~~~~~~~-~i~~~  227 (366)
                                  ..+...|+.+|.+.+.+.+.++.+++  +++..+.++.+ ..+...        ... ..+. .....
T Consensus       149 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~  215 (281)
T 3zv4_A          149 ------------NGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSIS-SVPLADMLKS  215 (281)
T ss_dssp             ------------SSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC---------CCHHHHHHH
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccccccccccc-chhHHHHHHh
Confidence                        22355799999999999999998865  66666644332 111000        000 0000 00001


Q ss_pred             CcceeeeeeHHHHHHHHHHHHh-cC----CCCcEEecCCCc
Q 044498          228 GKQTRSLTFIDECVEGVLRLIK-SD----FREPLNIGSDEM  263 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~-~~----~~~~~~i~~~~~  263 (366)
                      ......+...+|+|++++.++. ..    .++++++.+|..
T Consensus       216 ~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          216 VLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             TCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             cCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            1122346789999999999987 32    578999988753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.72  E-value=1.1e-17  Score=149.08  Aligned_cols=205  Identities=16%  Similarity=0.075  Sum_probs=139.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHH---cCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKS---ERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~---~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l   90 (366)
                      +++++|||||+|+||++++++|++   +|++         |++++|+.......        ....+.++.+|+++++++
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   75 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSV---------MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCE---------EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCe---------EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHH
Confidence            457899999999999999999999   8999         99999876432111        023468899999999887


Q ss_pred             Hhhhc---------CCC--EEEEcccccCCc--cc----cccCcchhhhhhHHHHHHHHHHHHHcCCC----ceeEEEEe
Q 044498           91 LRMTS---------GVD--NMSNLAADMGGM--GF----IQSNHSVIMYKNTTISFDMLEAARMNGVM----SLTFFFVS  149 (366)
Q Consensus        91 ~~~~~---------~~d--~vi~~a~~~~~~--~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~~~----~~r~I~~S  149 (366)
                      .++++         ++|  ++||+||.....  ..    ...+....+++|+.++.++++++...-.+    ..+||++|
T Consensus        76 ~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~is  155 (259)
T 1oaa_A           76 QRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNIS  155 (259)
T ss_dssp             HHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEEC
T ss_pred             HHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEc
Confidence            76542         468  999999975321  11    12234556899999999999999765222    13799999


Q ss_pred             cccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC-CcEEEeCCCcH-HHHHHHHHhCCCCe---EE
Q 044498          150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE-IECRLVGEKAP-AAFSRKAVTSTDNF---EM  224 (366)
Q Consensus       150 S~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~-~~~~i~r~~~~-~~~~~~~~~~~~~~---~i  224 (366)
                      |...+..               ..+...|+.+|...+.+.+.++.+++ +++..+.++.+ ..+...........   ..
T Consensus       156 S~~~~~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  220 (259)
T 1oaa_A          156 SLCALQP---------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             CGGGTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             CchhcCC---------------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHH
Confidence            9766532               22356799999999999999998874 56666655433 33333222100000   00


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhc
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKS  250 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~  250 (366)
                      +........+...+|+|++++.++..
T Consensus       221 ~~~~~p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          221 LQKLKSDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred             HHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence            00000123467899999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.72  E-value=1e-16  Score=141.77  Aligned_cols=194  Identities=12%  Similarity=0.006  Sum_probs=137.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|+++.+++.++++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~   76 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAA---------VAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVA   76 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         99999875432111      12346789999999988877664


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|++||+||..........   +....+++|+.++.++++++..    .+ .  +||++||...+..     
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g--~iv~isS~~~~~~-----  148 (247)
T 2jah_A           77 STVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-G--TVVQMSSIAGRVN-----  148 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C--EEEEECCGGGTCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C--EEEEEccHHhcCC-----
Confidence                   79999999997532212222   2345588999999998888754    34 5  8999999765432     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHH--------HHHHhCCCCeEEecCCc
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFS--------RKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~--------~~~~~~~~~~~i~~~~~  229 (366)
                                ..+...|+.+|...+.+.+.++.++   ++++..++++.+. .+.        ..... .    .+  + 
T Consensus       149 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~----~~--~-  210 (247)
T 2jah_A          149 ----------VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE-Q----RI--S-  210 (247)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHH-H----HT--T-
T ss_pred             ----------CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHH-h----cc--c-
Confidence                      1235679999999999998887764   7899888655331 110        00111 0    00  0 


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                       ...+...+|+|++++.++..+
T Consensus       211 -~~~~~~pedvA~~v~~l~s~~  231 (247)
T 2jah_A          211 -QIRKLQAQDIAEAVRYAVTAP  231 (247)
T ss_dssp             -TSCCBCHHHHHHHHHHHHHSC
T ss_pred             -ccCCCCHHHHHHHHHHHhCCC
Confidence             011478999999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.71  E-value=7.9e-17  Score=144.33  Aligned_cols=216  Identities=11%  Similarity=0.025  Sum_probs=147.1

Q ss_pred             CCCeEEEEcC--CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGV--GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||  +|+||++++++|+++|++         |++++|+.....    ......+.++.+|+++++++.++++
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQ---------LVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAG   76 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCE---------EEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCE---------EEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHH
Confidence            4578999999  999999999999999999         999998764321    1112246889999999998887764


Q ss_pred             ----------CCCEEEEcccccCC-----ccccc---cCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCC
Q 044498           96 ----------GVDNMSNLAADMGG-----MGFIQ---SNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        96 ----------~~d~vi~~a~~~~~-----~~~~~---~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~  157 (366)
                                ++|++||+||....     .....   .+....+++|+.++.++++++...-.++.++|++||...++  
T Consensus        77 ~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~--  154 (269)
T 2h7i_A           77 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA--  154 (269)
T ss_dssp             HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC--
T ss_pred             HHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc--
Confidence                      78999999997541     11112   22344588999999999999976421112899999864321  


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe----------E
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF----------E  223 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~----------~  223 (366)
                                    ..+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+..........-          .
T Consensus       155 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (269)
T 2h7i_A          155 --------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  220 (269)
T ss_dssp             --------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             --------------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHH
Confidence                          1235679999999999999988775   788888866543 22222221100000          0


Q ss_pred             EecCCccee-eeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          224 MWGDGKQTR-SLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       224 i~~~~~~~~-~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+....... .+...+|+|++++.++...    .++.+.+.+|.
T Consensus       221 ~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          221 GWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             hhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            000000111 3567899999999999653    46788888774

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.71  E-value=7.5e-17  Score=148.53  Aligned_cols=212  Identities=17%  Similarity=0.088  Sum_probs=139.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------------ccccceEEEccCCChhHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------------~~~~v~~~~~D~~~~~~l   90 (366)
                      +++||||||+|+||++++++|+++|++         |+++.|........            ....+.++.+|+++.+++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~---------v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   72 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQ---------SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV   72 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTC---------CEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCc---------eEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHH
Confidence            468999999999999999999999998         87776543321110            013468899999999999


Q ss_pred             Hhhhc-----CCCEEEEcccccCCcccc---ccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCC
Q 044498           91 LRMTS-----GVDNMSNLAADMGGMGFI---QSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        91 ~~~~~-----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      .++++     ++|++||+||........   ..+....+++|+.++.++++++    ++.+..  +||++||...+... 
T Consensus        73 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g--~IV~isS~~~~~~~-  149 (327)
T 1jtv_A           73 AAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG--RVLVTGSVGGLMGL-  149 (327)
T ss_dssp             HHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEEEEGGGTSCC-
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--EEEEECCcccccCC-
Confidence            88876     489999999965321111   1233456889999999999886    344556  99999997654321 


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH---cCCcEEEeCCCcH-HHHHHHHHhC------CCCeE---Ee
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD---FEIECRLVGEKAP-AAFSRKAVTS------TDNFE---MW  225 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~---~~~~~~i~r~~~~-~~~~~~~~~~------~~~~~---i~  225 (366)
                                    .....|+.+|...+.+.+.++.+   +++++.+++++.+ ..+.......      .....   ++
T Consensus       150 --------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  215 (327)
T 1jtv_A          150 --------------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRF  215 (327)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHH
T ss_pred             --------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHH
Confidence                          22457999999999999998886   5788888865543 2222211100      00000   00


Q ss_pred             cCC-----cceee-eeeHHHHHHHHHHHHhcCCCCcEEecC
Q 044498          226 GDG-----KQTRS-LTFIDECVEGVLRLIKSDFREPLNIGS  260 (366)
Q Consensus       226 ~~~-----~~~~~-~i~v~D~a~~~~~~l~~~~~~~~~i~~  260 (366)
                      ..-     ..... ....+|+|++++.++..+....-++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg  256 (327)
T 1jtv_A          216 YQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (327)
T ss_dssp             HHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            000     00011 247999999999999876444444443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.70  E-value=6.7e-16  Score=136.13  Aligned_cols=209  Identities=12%  Similarity=0.039  Sum_probs=145.6

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.+++.+|||||++.||+++++.|.++|.+         |++++|+.....      ......+.++.+|+++++++.++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~---------Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~   74 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSI---------VVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEF   74 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            347889999999999999999999999999         999998765321      11223467899999999988876


Q ss_pred             hc-------CCCEEEEcccccCCcc-cccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMG-FIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~-~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      ++       ++|++||+||...... ....   +.+..+++|+.++..+.+++.+    .+-.  ++|++||..-+-.  
T Consensus        75 ~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G--~IVnisS~~g~~~--  150 (254)
T 4fn4_A           75 VRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG--VIVNTASIAGIRG--  150 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTCS--
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEEechhhcCC--
Confidence            53       6999999999654321 2222   3345588999998877776654    3444  8999999653211  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH------------HHHHHHHHhCCCCeE
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP------------AAFSRKAVTSTDNFE  223 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~------------~~~~~~~~~~~~~~~  223 (366)
                                   ......|+.+|.....+.+.++.++   |+++..+-|+.+            ........+...+  
T Consensus       151 -------------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--  215 (254)
T 4fn4_A          151 -------------GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSL--  215 (254)
T ss_dssp             -------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTT--
T ss_pred             -------------CCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCC--
Confidence                         1224579999999999999988876   677766633322            1111111110001  


Q ss_pred             EecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          224 MWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       224 i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                             ...+...+|+|.++++|+...    .++++.+.+|.+
T Consensus       216 -------~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          216 -------SSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             -------CCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -------CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence                   112456899999999998542    588999988743

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.69  E-value=1.4e-16  Score=152.68  Aligned_cols=213  Identities=14%  Similarity=0.036  Sum_probs=146.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---ccccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---MEDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---~~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .++++|||||+|.||.+++++|.++|++         |++++|+.....   .....++.++.+|++|.+++.++++   
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~---------Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGAT---------VVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHH
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCE---------EEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHH
Confidence            5679999999999999999999999999         999988643211   1122356899999999988877653   


Q ss_pred             ----C-CCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCCCC
Q 044498           96 ----G-VDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ----~-~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                          + +|+|||+||..........+.   ...+.+|+.++.++.+++...    +..  +||++||...+..       
T Consensus       283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g--~iV~iSS~a~~~g-------  353 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG--RVIGLSSMAGIAG-------  353 (454)
T ss_dssp             HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC--EEEEECCHHHHHC-------
T ss_pred             HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC--EEEEEeChHhCCC-------
Confidence                3 999999999765322222232   345889999999999999876    555  8999999654321       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                              ......|+.+|...+.+.+.++.++   ++++..+.++.+ ..+..........  ..........+...+|
T Consensus       354 --------~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~l~r~g~ped  423 (454)
T 3u0b_A          354 --------NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATRE--VGRRLNSLFQGGQPVD  423 (454)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CH--HHHHSBTTSSCBCHHH
T ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHH--HHHhhccccCCCCHHH
Confidence                    1235679999999998888887664   788888855443 2221111100000  0000011223467899


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++++..++...    .++++++.++.
T Consensus       424 vA~~v~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          424 VAELIAYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred             HHHHHHHHhCCccCCCCCcEEEECCcc
Confidence            999999998642    57889988764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.69  E-value=8.1e-18  Score=155.01  Aligned_cols=166  Identities=10%  Similarity=0.037  Sum_probs=118.1

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCC-------CCCCCCCccEEEEEeCCCc-ccc-----ccccccceEEEccCCC
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERH-------YSTSIPNALYIIASDWNKN-EHM-----MEDMFCHEFHLVDLRV   86 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~~~~~~~~~~V~~~~r~~~-~~~-----~~~~~~v~~~~~D~~~   86 (366)
                      |.++|||+||||+||||++++..|+++|+       +         |+++++... ...     ......+.++ +|+.+
T Consensus         1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~e---------v~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~   70 (327)
T 1y7t_A            1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVI---------LQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEA   70 (327)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEE---------EEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCE---------EEEEeCCCchhhccchhhhhhccccccc-CCeEe
Confidence            34557999999999999999999999886       6         999987642 100     1111112344 67777


Q ss_pred             hhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEecccccCCCCCCCCCcc
Q 044498           87 MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        87 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                      ...+.++++++|+|||+||....   ...++..++..|+.++.++++++++++ .+ .+||++|+....    ..+  ..
T Consensus        71 ~~~~~~a~~~~D~Vih~Ag~~~~---~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~-~~vvv~snp~~~----~~~--~~  140 (327)
T 1y7t_A           71 TDDPKVAFKDADYALLVGAAPRK---AGMERRDLLQVNGKIFTEQGRALAEVAKKD-VKVLVVGNPANT----NAL--IA  140 (327)
T ss_dssp             ESCHHHHTTTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTT-CEEEECSSSHHH----HHH--HH
T ss_pred             ccChHHHhCCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEEEeCCchhh----hHH--HH
Confidence            67777888999999999997642   234667889999999999999999985 43 267777764200    000  01


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE  205 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~  205 (366)
                      +.......|.++|+.+|+..|++...+++.++++.+++|+
T Consensus       141 ~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~  180 (327)
T 1y7t_A          141 YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRR  180 (327)
T ss_dssp             HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEEC
T ss_pred             HHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheee
Confidence            1111124567889999999999999999988887766654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.68  E-value=2e-17  Score=146.06  Aligned_cols=211  Identities=10%  Similarity=0.010  Sum_probs=133.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-e--CCCcccccccc--ccceEEEccCCChhHHHh-h---
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-D--WNKNEHMMEDM--FCHEFHLVDLRVMDNCLR-M---   93 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~--r~~~~~~~~~~--~~v~~~~~D~~~~~~l~~-~---   93 (366)
                      ++++|||||+|+||++++++|+++|++         |+++ +  |+.........  .+..+.  |..+.+.+.+ +   
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYT---------VVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCE---------EEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE---------EEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHH
Confidence            468999999999999999999999999         9999 5  76543211100  111221  4333332222 2   


Q ss_pred             hcCCCEEEEcccccCC---cccc---ccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCC
Q 044498           94 TSGVDNMSNLAADMGG---MGFI---QSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~---~~~~---~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                      +.++|++||+||....   ....   ..+....+++|+.++.++++++.    +.+..  +||++||...+...      
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g--~iv~isS~~~~~~~------  141 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGA--SVIFITSSVGKKPL------  141 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCGGGTSCC------
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc--EEEEECChhhCCCC------
Confidence            2368999999997542   1111   12334568899999999888775    34555  89999997655321      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHH---HHHHhCCCCe-EEecCCcceeeee
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFS---RKAVTSTDNF-EMWGDGKQTRSLT  235 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~---~~~~~~~~~~-~i~~~~~~~~~~i  235 (366)
                               .+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+.   ..... .... .+.........+.
T Consensus       142 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~p~~r~~  211 (244)
T 1zmo_A          142 ---------AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN-NPELRERVDRDVPLGRLG  211 (244)
T ss_dssp             ---------TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH-CHHHHHHHHHHCTTCSCB
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc-hHHHHHHHhcCCCCCCCc
Confidence                     234579999999999999988775   788888765432 1111   11110 0000 0000000112357


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+|+|++++.++...    .++.+.+.+|.
T Consensus       212 ~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          212 RPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             CHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            8999999999998753    47788887663

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.68  E-value=8.2e-17  Score=142.04  Aligned_cols=214  Identities=12%  Similarity=0.012  Sum_probs=145.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++++++||||++.||+++++.|.++|.+         |++.+|+.....      ......+..+.+|++++++++++++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~---------Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~   78 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGAR---------VILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFS   78 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            6789999999999999999999999999         999998764321      1122346788999999988877653


Q ss_pred             -------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH-----cCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM-----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~-----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||..........+.   +..+++|+.++..+.+++.+     .+-.  ++|++||...+..    
T Consensus        79 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G--~IVnisS~~~~~~----  152 (255)
T 4g81_D           79 KLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGG--KIINIGSLTSQAA----  152 (255)
T ss_dssp             HHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCGGGTSB----
T ss_pred             HHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCC--EEEEEeehhhcCC----
Confidence                   6999999999875443333333   44488999998888876643     2333  8999999754321    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~i  235 (366)
                                 ......|+.+|.....+.+.++.++   |+++..+-|+.+ ..+...... .+.. ...........+.
T Consensus       153 -----------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~Pl~R~g  220 (255)
T 4g81_D          153 -----------RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-DKQFDSWVKSSTPSQRWG  220 (255)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-CHHHHHHHHHHSTTCSCB
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-CHHHHHHHHhCCCCCCCc
Confidence                       1224579999999999999988876   677766644322 111111111 0000 0000000112255


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..+|+|.+++.++...    .++++.+.+|.
T Consensus       221 ~pediA~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          221 RPEELIGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence            6899999999998542    58889988774

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.68  E-value=1e-15  Score=147.99  Aligned_cols=215  Identities=11%  Similarity=0.030  Sum_probs=148.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc---------cccccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH---------MMEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~---------~~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .+++||||||+|+||.+++++|.++|++.        |++++|+....         .......+.++.+|++|.+++.+
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~--------vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~  296 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPH--------LLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRE  296 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSE--------EEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCE--------EEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence            56789999999999999999999999841        77888875421         11122356889999999999988


Q ss_pred             hhcC------CCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc-cCCCCCCCC
Q 044498           93 MTSG------VDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI-YPEFKQLDT  162 (366)
Q Consensus        93 ~~~~------~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v-yg~~~~~~~  162 (366)
                      +++.      +|+|||+||..........+   ....+..|+.++.++++++...+.+  +||++||... +|..     
T Consensus       297 ~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~--~~V~~SS~a~~~g~~-----  369 (486)
T 2fr1_A          297 LLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLT--AFVLFSSFASAFGAP-----  369 (486)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCS--EEEEEEEHHHHTCCT-----
T ss_pred             HHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC--EEEEEcChHhcCCCC-----
Confidence            8765      49999999976432122222   3345778999999999999988888  9999999643 4422     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHH--HHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAA--FSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                                 ....|+.+|...+.+..++. ..|+++++++++.+..  +......     ....  ......++.+|+
T Consensus       370 -----------g~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~~~~-----~~~~--~~g~~~i~~e~~  430 (486)
T 2fr1_A          370 -----------GLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEGPVA-----DRFR--RHGVIEMPPETA  430 (486)
T ss_dssp             -----------TCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-----------------CT--TTTEECBCHHHH
T ss_pred             -----------CCHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccchhHH-----HHHH--hcCCCCCCHHHH
Confidence                       24569999999998877654 4589988886544311  2111110     0111  122457899999


Q ss_pred             HHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHH
Q 044498          241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIIL  274 (366)
Q Consensus       241 a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~  274 (366)
                      ++++..++..+...+. +.   .+.+..+...+.
T Consensus       431 a~~l~~~l~~~~~~~~-v~---~~d~~~~~~~~~  460 (486)
T 2fr1_A          431 CRALQNALDRAEVCPI-VI---DVRWDRFLLAYT  460 (486)
T ss_dssp             HHHHHHHHHTTCSSCE-EC---EECHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCeEE-EE---eCCHHHHhhhhc
Confidence            9999999987654433 22   256776665543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.68  E-value=4.7e-15  Score=131.62  Aligned_cols=212  Identities=14%  Similarity=0.074  Sum_probs=143.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +++++|||||++.||+++++.|.++|++         |++.+|...+....    ..++.+|+++++++.++++      
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQ---------VLTTARARPEGLPE----ELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCE---------EEEEESSCCTTSCT----TTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCE---------EEEEECCchhCCCc----EEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            6689999999999999999999999999         99999976543322    2578999999988777653      


Q ss_pred             -CCCEEEEcccccCCc--ccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 -GVDNMSNLAADMGGM--GFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~--~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                       ++|++||+||.....  .....   +....+++|+.++..+.+++..    .+-.  ++|++||..-.-..        
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G--~Iv~isS~~~~~~~--------  146 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSG--VVVHVTSIQRVLPL--------  146 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC--------
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCc--eEEEEEehhhccCC--------
Confidence             699999999965321  12222   3345588999998877776653    4444  89999996432111        


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HH----HHHHHHhC-CCCeE-------EecCCc
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AA----FSRKAVTS-TDNFE-------MWGDGK  229 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~----~~~~~~~~-~~~~~-------i~~~~~  229 (366)
                            +.....|+.+|...+.+.+.++.++   |+++..+.|+.+ ..    +.....+. +....       -.....
T Consensus       147 ------~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 4h15_A          147 ------PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI  220 (261)
T ss_dssp             ------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC
Confidence                  1124569999999999999988875   677777754432 22    21111110 00000       000111


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ....+...+|+|.++++|+...    .++++.+.+|-
T Consensus       221 PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          221 PLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            1223667999999999998542    58899998774

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.68  E-value=3.1e-16  Score=137.15  Aligned_cols=217  Identities=12%  Similarity=0.036  Sum_probs=146.9

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhhc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .-+++++|||||++.||+++++.|.++|.+         |.+.+|+..+..    ......+..+.+|++|++++.++++
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~---------Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~   76 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAE---------VVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT   76 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCE---------EEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH
Confidence            347889999999999999999999999999         999998764321    1123346789999999998888765


Q ss_pred             --CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cC-CCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 --GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NG-VMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~-~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                        ++|++||+||........+.+   .+..+++|+.++..+.+++.+    .+ -.  ++|++||..-+-..        
T Consensus        77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G--~IVnisS~~~~~g~--------  146 (247)
T 4hp8_A           77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSG--KVVNIASLLSFQGG--------  146 (247)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCGGGTSCC--------
T ss_pred             hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCc--EEEEEechhhCCCC--------
Confidence              699999999987543333333   344588999999888876543    23 23  89999996543211        


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                             .....|+.+|.....+.+.++.++   |+++..+-|+.+ ..+............-.........+-..+|+|
T Consensus       147 -------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA  219 (247)
T 4hp8_A          147 -------IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIA  219 (247)
T ss_dssp             -------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHH
T ss_pred             -------CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHH
Confidence                   124579999999999999988876   677766644322 111111111000000000111112355689999


Q ss_pred             HHHHHHHhcC----CCCcEEecCCC
Q 044498          242 EGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       242 ~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .++++|+...    .++++.+.+|.
T Consensus       220 ~~v~fLaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          220 GAAVFLSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCCcCCeEEECccc
Confidence            9999998543    58889988774

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.67  E-value=1.3e-15  Score=135.72  Aligned_cols=216  Identities=12%  Similarity=-0.008  Sum_probs=145.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++.+|||||++.||+++++.|.++|.+         |++.+|+......   .....+..+.+|++++++++++++   
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~---------V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   98 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGAR---------VFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVK   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999         9999998653221   122346789999999998877653   


Q ss_pred             ----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                          ++|++||+||..........+   .+..+++|+.++..+.+++.+.=.+..++|++||....-.            
T Consensus        99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~------------  166 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG------------  166 (273)
T ss_dssp             HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC------------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC------------
Confidence                689999999976443333333   3445889999999999988765222237999999654321            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe------EEecCCcceeeeeeHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF------EMWGDGKQTRSLTFID  238 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~------~i~~~~~~~~~~i~v~  238 (366)
                         ......|+.+|.....+.+.++.++   |+++..+.|+.+ ..++..... ..+.      ...........+...+
T Consensus       167 ---~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~~~~~~PlgR~g~pe  242 (273)
T 4fgs_A          167 ---TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG-KDPVQQQGLLNALAAQVPMGRVGRAE  242 (273)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC----------CHHHHHHHHHHHHHHSTTSSCBCHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc-cCchhhHHHHHHHHhcCCCCCCcCHH
Confidence               1224579999999999999999887   566666643322 111111110 0000      0000000112255689


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |+|.++++|+...    .++++.+.+|.
T Consensus       243 eiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          243 EVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHhCchhcCccCCeEeECcCh
Confidence            9999999998542    58889988774

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.66  E-value=2.9e-16  Score=144.04  Aligned_cols=202  Identities=17%  Similarity=0.168  Sum_probs=140.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC---------Cccccc----cccccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN---------KNEHMM----EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~---------~~~~~~----~~~~~v~~~~~D~~~~~   88 (366)
                      .++++|||||+|+||+++++.|+++|++         |++.++.         ......    ....+ ..+.+|+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~---------Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~~~~~D~~~~~   77 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGAL---------VVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-GKAVANYDSVE   77 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-CEEEEECCCGG
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEcCCcccccccCCHHHHHHHHHHHHhhC-CeEEEeCCCHH
Confidence            5689999999999999999999999999         9997653         211100    00111 23458999987


Q ss_pred             HHHhhh-------cCCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEeccc-c
Q 044498           89 NCLRMT-------SGVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSAC-I  153 (366)
Q Consensus        89 ~l~~~~-------~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~-v  153 (366)
                      ++.+++       .++|++||+||.......   ...+.+..+.+|+.++.++++++.    +.+..  +||++||.. .
T Consensus        78 ~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g--rIV~vsS~~~~  155 (319)
T 1gz6_A           78 AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG--RIIMTASASGI  155 (319)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEECChhhc
Confidence            665543       369999999997643211   122345568899999988888773    34555  999999963 4


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcc
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      ++..                +...|+.+|+..+.+.+.++.++   ++++..+.++.+..+.    . . .  .   +..
T Consensus       156 ~~~~----------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~t~~~----~-~-~--~---~~~  208 (319)
T 1gz6_A          156 YGNF----------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT----E-T-V--M---PED  208 (319)
T ss_dssp             HCCT----------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT----G-G-G--S---CHH
T ss_pred             cCCC----------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCccccc----c-c-c--C---Chh
Confidence            4421                24579999999999999988874   7888888766542211    1 0 0  0   112


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC---CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD---FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~~  262 (366)
                      ...++..+|+|.+++.++..+   .++.|++.+|.
T Consensus       209 ~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~  243 (319)
T 1gz6_A          209 LVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGW  243 (319)
T ss_dssp             HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred             hhccCCHHHHHHHHHHHhCchhhcCCCEEEECCCe
Confidence            234578999999999998653   47788887764

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.66  E-value=9.5e-16  Score=148.89  Aligned_cols=211  Identities=13%  Similarity=0.042  Sum_probs=148.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~~l~   91 (366)
                      .+++||||||+|+||.+++++|.++|+ .         |++++|+.....         ......+.++.+|++|.+++.
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~---------vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~  328 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAER---------LVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALA  328 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSE---------EEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcE---------EEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH
Confidence            567899999999999999999999998 5         778888753211         112234788999999999999


Q ss_pred             hhhcC--CCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEeccc-ccCCCCCCCCCc
Q 044498           92 RMTSG--VDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSAC-IYPEFKQLDTDV  164 (366)
Q Consensus        92 ~~~~~--~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~-vyg~~~~~~~~~  164 (366)
                      +++++  +|+|||+||..........+   ....+..|+.++.++.+++... +.+  +||++||.. ++|..       
T Consensus       329 ~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~--~~V~~SS~a~~~g~~-------  399 (511)
T 2z5l_A          329 ALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLD--AFVLFSSVTGTWGNA-------  399 (511)
T ss_dssp             HHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCC--CEEEEEEGGGTTCCT-------
T ss_pred             HHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCC--EEEEEeCHHhcCCCC-------
Confidence            98864  99999999976432222222   2345788999999999998876 677  899999964 44432       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH--HHH----HHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP--AAF----SRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~--~~~----~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                               +...|+.+|...+.+.+.+. ..++++++++++.+  ..+    ....+.           ......+..+
T Consensus       400 ---------g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~~~~~~~~-----------~~g~~~l~~e  458 (511)
T 2z5l_A          400 ---------GQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAGAGEESLS-----------RRGLRAMDPD  458 (511)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCCHHHHHHH-----------HHTBCCBCHH
T ss_pred             ---------CCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccccccHHHHH-----------hcCCCCCCHH
Confidence                     24579999999999888764 45899888854433  000    000010           0112357899


Q ss_pred             HHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHH
Q 044498          239 ECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILS  275 (366)
Q Consensus       239 D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~  275 (366)
                      |+++++..++..+...++ +.   .+.+..+...+..
T Consensus       459 ~~a~~l~~al~~~~~~v~-v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          459 AAVDALLGAMGRNDVCVT-VV---DVDWERFAPATNA  491 (511)
T ss_dssp             HHHHHHHHHHHHTCSEEE-EC---CBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCEEE-EE---eCCHHHHHhhhcc
Confidence            999999999987654332 33   2567777666544

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.65  E-value=1.1e-14  Score=129.23  Aligned_cols=207  Identities=9%  Similarity=0.003  Sum_probs=144.5

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++++++||||+|  -||.++++.|.++|++         |++.+|+......       .....+.++.+|+++++++.+
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~---------Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAK---------LVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVIN   75 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHH
Confidence            678999999987  8999999999999999         9999997643211       122356889999999988777


Q ss_pred             hhc-------CCCEEEEcccccCCcc----ccccCcc---hhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMG----FIQSNHS---VIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~----~~~~~~~---~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +++       ++|++||+||......    ..+...+   ..+++|+.+...+..++...-.++.++|++||..-.-   
T Consensus        76 ~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~---  152 (256)
T 4fs3_A           76 GFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF---  152 (256)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS---
T ss_pred             HHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc---
Confidence            653       7999999999754211    1112222   2356788888888888776543334899999964321   


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEE
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEM  224 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i  224 (366)
                                  +......|+.+|...+.+.+.++.++   |+++..+.|+.+           ..+...+.. ..++  
T Consensus       153 ------------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~-~~Pl--  217 (256)
T 4fs3_A          153 ------------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKE-RAPL--  217 (256)
T ss_dssp             ------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHH-HSTT--
T ss_pred             ------------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHh-cCCC--
Confidence                        12235679999999999999988875   677777643322           233333333 1221  


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                             ..+...+|+|.++++|+...    .++++.+.+|.
T Consensus       218 -------~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          218 -------KRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             -------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -------CCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCH
Confidence                   12456899999999998542    58889988774

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.65  E-value=7e-16  Score=140.76  Aligned_cols=211  Identities=12%  Similarity=-0.050  Sum_probs=138.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCCh-hHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVM-DNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~-~~l~~~   93 (366)
                      ++++||||||+|+||.+++++|+++|++         |++++|+......       .....+.++.+|+++. +.+.++
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~   81 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIM---------VVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL   81 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence            5678999999999999999999999999         9999998653211       1123568999999998 766655


Q ss_pred             hc-------CCCEEEEcccccCCc---------------------------------cccccCcchhhhhhHHHHHHHHH
Q 044498           94 TS-------GVDNMSNLAADMGGM---------------------------------GFIQSNHSVIMYKNTTISFDMLE  133 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~---------------------------------~~~~~~~~~~~~~nv~~~~~ll~  133 (366)
                      ++       ++|++||+||.....                                 ..........+.+|+.++.++++
T Consensus        82 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  161 (311)
T 3o26_A           82 ADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTE  161 (311)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHH
Confidence            43       799999999976321                                 00111223458999999888888


Q ss_pred             HHHH----cCCCceeEEEEecccccCCCCCCC---------CC----------------c---ccccCCCCCCCCchHHH
Q 044498          134 AARM----NGVMSLTFFFVSSACIYPEFKQLD---------TD----------------V---KESEAWPAEPQDAYGLE  181 (366)
Q Consensus       134 a~~~----~~~~~~r~I~~SS~~vyg~~~~~~---------~~----------------~---~e~~~~~~~p~~~Y~~s  181 (366)
                      ++..    .+..  +||++||...+.......         ..                +   .........+...|+.+
T Consensus       162 ~~~~~l~~~~~~--~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~S  239 (311)
T 3o26_A          162 VLIPLLQLSDSP--RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTS  239 (311)
T ss_dssp             HHHHHHTTSSSC--EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHH
T ss_pred             HhhHhhccCCCC--eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHH
Confidence            8754    3455  899999975432210000         00                0   00000112345789999


Q ss_pred             HHHHHHHHHHHHHHc-CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC---CCCcEE
Q 044498          182 KLATEGLCKHYTKDF-EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD---FREPLN  257 (366)
Q Consensus       182 K~~~E~~l~~~~~~~-~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~  257 (366)
                      |++.+.+.+.++.++ ++++..+.++.+..-   +.. .            ......++.++.++.++..+   .++.|.
T Consensus       240 K~a~~~~~~~la~e~~~i~v~~v~PG~v~T~---~~~-~------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          240 KACLNAYTRVLANKIPKFQVNCVCPGLVKTE---MNY-G------------IGNYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEEECCCSBCSG---GGT-T------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHHHHHHHHhhcCCceEEEecCCceecC---CcC-C------------CCCCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            999999999999987 577777766644110   000 0            01246889999998887654   234444


Q ss_pred             ec
Q 044498          258 IG  259 (366)
Q Consensus       258 i~  259 (366)
                      ..
T Consensus       304 ~~  305 (311)
T 3o26_A          304 DC  305 (311)
T ss_dssp             TC
T ss_pred             cc
Confidence            44

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.65  E-value=3.6e-15  Score=132.02  Aligned_cols=214  Identities=14%  Similarity=0.100  Sum_probs=144.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----ccccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----MEDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++.+|||||++.||+++++.|.++|.+         |++.+|+.....     .....++.++.+|+++++++.++++ 
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~---------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~   76 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAI---------PVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQ   76 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHH
Confidence            6789999999999999999999999999         999998865422     1123356899999999988776653 


Q ss_pred             ------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                            ++|++||+||..... ..+.+   ....+++|+.++..+.+++.++   +-.  ++|++||..-+...      
T Consensus        77 ~~~~~G~iDiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G--~IVnisS~~~~~~~------  147 (258)
T 4gkb_A           77 TIATFGRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRG--AIVNISSKTAVTGQ------  147 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEECCTHHHHCC------
T ss_pred             HHHHhCCCCEEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--eEEEEeehhhccCC------
Confidence                  699999999975432 22222   3445889999988877766532   123  89999997543211      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCC----CeEEecCCcce-eee
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTD----NFEMWGDGKQT-RSL  234 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~----~~~i~~~~~~~-~~~  234 (366)
                               .....|+.+|.....+.+.++.++   |+++..+.|+.+ ..+.........    ...-....... +.+
T Consensus       148 ---------~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~  218 (258)
T 4gkb_A          148 ---------GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRF  218 (258)
T ss_dssp             ---------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSC
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCC
Confidence                     124579999999999999988875   788877744322 111111110000    00000000011 235


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ...+|+|.++++++...    .++++.+.+|.
T Consensus       219 g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          219 TTPDEIADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence            67899999999998542    68899998875

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.64  E-value=1.4e-15  Score=135.51  Aligned_cols=203  Identities=11%  Similarity=-0.021  Sum_probs=131.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------ccccceEEEccCCChhHHHhhh-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DMFCHEFHLVDLRVMDNCLRMT-   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~~~v~~~~~D~~~~~~l~~~~-   94 (366)
                      +++++|||||+|+||++++++|+++|++         |++++|+.......      ....+.++.+|++|.+++.+++ 
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGAT---------VYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFE   74 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999         99999875432111      1224678999999998776654 


Q ss_pred             -------cCCCEEEEccc--cc-----CCcccccc---CcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccc
Q 044498           95 -------SGVDNMSNLAA--DM-----GGMGFIQS---NHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACI  153 (366)
Q Consensus        95 -------~~~d~vi~~a~--~~-----~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~v  153 (366)
                             .++|++||+||  ..     ........   +....+.+|+.++.++.+++.    +.+..  ++|++||...
T Consensus        75 ~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g--~iv~isS~~~  152 (260)
T 2qq5_A           75 QVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG--LIVVISSPGS  152 (260)
T ss_dssp             HHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCC--EEEEECCGGG
T ss_pred             HHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCc--EEEEEcChhh
Confidence                   35799999994  22     01111112   234557789888877766654    44556  8999999765


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC--eEEec-
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN--FEMWG-  226 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~--~~i~~-  226 (366)
                      +..                .+...|+.+|...+.+.+.++.++   ++++..++++.+ ..+..........  ..... 
T Consensus       153 ~~~----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (260)
T 2qq5_A          153 LQY----------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ  216 (260)
T ss_dssp             TSC----------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------
T ss_pred             cCC----------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH
Confidence            431                124579999999999999988764   899988876644 2221111110000  00000 


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                      .......+...+|+|++++.++..+
T Consensus       217 ~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          217 FKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHTCT
T ss_pred             HHhhhccCCCHHHHHHHHHHHhcCc
Confidence            0001112356899999999998653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.55  E-value=2.2e-13  Score=123.62  Aligned_cols=205  Identities=8%  Similarity=-0.031  Sum_probs=131.9

Q ss_pred             CCCeEEEEcCC--CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC-----------cc--cccccccc-----ceEEE
Q 044498           22 GKLRISSIGVG--GFIPSNIARRLKSERHYSTSIPNALYIIASDWNK-----------NE--HMMEDMFC-----HEFHL   81 (366)
Q Consensus        22 ~~~~vlItGat--G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~-----------~~--~~~~~~~~-----v~~~~   81 (366)
                      +++++|||||+  |+||++++++|+++|++         |++++|+.           ..  .......+     ...+.
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAE---------ILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYP   77 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCE---------EEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEE
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCe---------EEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccc
Confidence            56789999999  99999999999999999         99887531           10  00000000     12233


Q ss_pred             cc--------C----CC--------hhHHHhhh-------cCCCEEEEcccccC--Cccc---cccCcchhhhhhHHHHH
Q 044498           82 VD--------L----RV--------MDNCLRMT-------SGVDNMSNLAADMG--GMGF---IQSNHSVIMYKNTTISF  129 (366)
Q Consensus        82 ~D--------~----~~--------~~~l~~~~-------~~~d~vi~~a~~~~--~~~~---~~~~~~~~~~~nv~~~~  129 (366)
                      +|        +    ++        .+++.+++       .++|++||+||...  ....   ...+....+++|+.++.
T Consensus        78 ~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~  157 (297)
T 1d7o_A           78 LDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV  157 (297)
T ss_dssp             ECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             cceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHH
Confidence            32        2    22        33344333       36999999998532  1111   12233456889999999


Q ss_pred             HHHHHHHHc--CCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC-CchHHHHHHHHHHHHHHHHH----cCCcEEE
Q 044498          130 DMLEAARMN--GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ-DAYGLEKLATEGLCKHYTKD----FEIECRL  202 (366)
Q Consensus       130 ~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~-~~Y~~sK~~~E~~l~~~~~~----~~~~~~i  202 (366)
                      ++++++...  ...  ++|++||...+...               .+. ..|+.+|.+.+.+.+.++.+    +++++..
T Consensus       158 ~l~~~~~~~m~~~g--~iv~isS~~~~~~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~  220 (297)
T 1d7o_A          158 SLLSHFLPIMNPGG--ASISLTYIASERII---------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNT  220 (297)
T ss_dssp             HHHHHHGGGEEEEE--EEEEEECGGGTSCC---------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             HHHHHHHHHhccCc--eEEEEeccccccCC---------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEE
Confidence            999999765  113  89999997543211               112 47999999999999888765    4888888


Q ss_pred             eCCCcH-----------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          203 VGEKAP-----------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       203 ~r~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++++.+           ..+...+.. ..+         ...+..++|+|++++.++...    .++.+++.+|.
T Consensus       221 v~PG~v~T~~~~~~~~~~~~~~~~~~-~~p---------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          221 ISAGPLGSRAAKAIGFIDTMIEYSYN-NAP---------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             EEECCCBCCCSSCCSHHHHHHHHHHH-HSS---------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             EeccccccchhhhccccHHHHHHhhc-cCC---------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            854322           122222221 111         123567999999999998642    57889998875

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.52  E-value=1.8e-14  Score=143.35  Aligned_cols=202  Identities=12%  Similarity=0.040  Sum_probs=135.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC---------Cccccc----cccccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN---------KNEHMM----EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~---------~~~~~~----~~~~~v~~~~~D~~~~~   88 (366)
                      +++++|||||+|.||++++++|+++|++         |++++|.         ......    ....+ ..+.+|+++.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~---------Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~D~~d~~   87 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAK---------VVVNDLGGTHSGDGASQRAADIVVDEIRKAG-GEAVADYNSVI   87 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEC--------------CHHHHHHHHHHTT-CCEEECCCCGG
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCcccccccCCHHHHHHHHHHHHHhC-CeEEEEeCCHH
Confidence            6789999999999999999999999999         9998872         111110    01111 23458999988


Q ss_pred             HHHhhhc-------CCCEEEEcccccCCccc---cccCcchhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccc-
Q 044498           89 NCLRMTS-------GVDNMSNLAADMGGMGF---IQSNHSVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACI-  153 (366)
Q Consensus        89 ~l~~~~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~v-  153 (366)
                      ++.++++       ++|++||+||.......   ...+....+++|+.++.++++++    ++.+..  +||++||... 
T Consensus        88 ~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g--~IV~isS~a~~  165 (613)
T 3oml_A           88 DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG--RIIMTSSNSGI  165 (613)
T ss_dssp             GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE--EEEEECCHHHH
T ss_pred             HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEECCHHHc
Confidence            7776654       58999999997643222   22233556889999999999888    444555  8999999643 


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcc
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      ++.                .+...|+.+|++.+.+.+.++.++   ++.+..+.+.....    +.....       ...
T Consensus       166 ~~~----------------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~----~~~~~~-------~~~  218 (613)
T 3oml_A          166 YGN----------------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASR----MTEGIL-------PDI  218 (613)
T ss_dssp             HCC----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------CCCC-------CHH
T ss_pred             CCC----------------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCCh----hhhhcc-------chh
Confidence            332                234579999999999999988875   67777776654322    221100       112


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC---CCCcEEecCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD---FREPLNIGSDE  262 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~~  262 (366)
                      ....+..+|+|.+++.++...   .++++++.+|.
T Consensus       219 ~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~  253 (613)
T 3oml_A          219 LFNELKPKLIAPVVAYLCHESCEDNGSYIESAAGW  253 (613)
T ss_dssp             HHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETTE
T ss_pred             hhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCCe
Confidence            234567899999999988653   57788887764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.51  E-value=1e-13  Score=133.76  Aligned_cols=190  Identities=12%  Similarity=0.066  Sum_probs=135.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChhHHHh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++++|||||+|.||.+++++|.++|+ .         |++++|+.....         ......+.++.+|++|.+++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~---------vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~  309 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAH---------LVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAA  309 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSE---------EEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcE---------EEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            47899999999999999999999998 5         777777643211         1123357899999999999888


Q ss_pred             hhc------CCCEEEEccccc-CCccccccC---cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc-cCCCCCCC
Q 044498           93 MTS------GVDNMSNLAADM-GGMGFIQSN---HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI-YPEFKQLD  161 (366)
Q Consensus        93 ~~~------~~d~vi~~a~~~-~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v-yg~~~~~~  161 (366)
                      +++      .+|+|||+||.. ........+   ....+..|+.++.++.+++......  +||++||... +|.     
T Consensus       310 ~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~--~iV~~SS~a~~~g~-----  382 (496)
T 3mje_A          310 LLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLD--AFVLFSSGAAVWGS-----  382 (496)
T ss_dssp             HHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCS--EEEEEEEHHHHTTC-----
T ss_pred             HHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCC--EEEEEeChHhcCCC-----
Confidence            775      479999999976 221112222   3445889999999999999998888  9999999643 332     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH--------HHHHHHHhCCCCeEEecCCcceee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA--------AFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                 .....|+.+|...+.+.+++. ..|++++.+.++.+.        .....+.+         .   -..
T Consensus       383 -----------~g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~---------~---g~~  438 (496)
T 3mje_A          383 -----------GGQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPEVHDRLVR---------Q---GVL  438 (496)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC------CHHHHH---------T---TEE
T ss_pred             -----------CCcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChHHHHHHHh---------c---CCC
Confidence                       124579999999998887654 458988887544220        00111111         0   122


Q ss_pred             eeeHHHHHHHHHHHHhcCC
Q 044498          234 LTFIDECVEGVLRLIKSDF  252 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~~  252 (366)
                      .+..++.++++..++..+.
T Consensus       439 ~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          439 AMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             EECHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHcCCC
Confidence            4578899999999988754

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.48  E-value=1.4e-13  Score=126.28  Aligned_cols=218  Identities=10%  Similarity=0.017  Sum_probs=119.5

Q ss_pred             CCCeEEEEcC--CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC----------cccccc----------------c
Q 044498           22 GKLRISSIGV--GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK----------NEHMME----------------D   73 (366)
Q Consensus        22 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~----------~~~~~~----------------~   73 (366)
                      .++++|||||  +|.||++++++|+++|++         |++++|++          ......                .
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~---------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGAR---------VLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAA   78 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCE---------EEEEECHHHHHHHHC--------------------------
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---------EEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhh
Confidence            4578999999  899999999999999999         99987531          000000                0


Q ss_pred             cc-----cceEEEcc------------CCC--------hhHHHhhh-------cCCCEEEEcccccC--Ccccccc---C
Q 044498           74 MF-----CHEFHLVD------------LRV--------MDNCLRMT-------SGVDNMSNLAADMG--GMGFIQS---N  116 (366)
Q Consensus        74 ~~-----~v~~~~~D------------~~~--------~~~l~~~~-------~~~d~vi~~a~~~~--~~~~~~~---~  116 (366)
                      ..     .+.++.+|            +++        .+++.+++       .++|++||+||...  .......   +
T Consensus        79 ~~~~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~  158 (319)
T 2ptg_A           79 EKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKG  158 (319)
T ss_dssp             ------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHH
T ss_pred             hccccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHH
Confidence            00     02344433            222        22343333       37999999999642  1111222   2


Q ss_pred             cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC-CchHHHHHHHHHHHHHHHHH
Q 044498          117 HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ-DAYGLEKLATEGLCKHYTKD  195 (366)
Q Consensus       117 ~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~-~~Y~~sK~~~E~~l~~~~~~  195 (366)
                      ....+++|+.++.++++++...=.+..+||++||...+...               ... ..|+.+|...+.+.+.++.+
T Consensus       159 ~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------------~~~~~~Y~asKaal~~l~~~la~e  223 (319)
T 2ptg_A          159 YLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI---------------PGYGGGMSSAKAALESDCRTLAFE  223 (319)
T ss_dssp             HHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------THHHHHHHHHH
T ss_pred             HHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc---------------CccchhhHHHHHHHHHHHHHHHHH
Confidence            34568899999999999997651101289999997543211               112 46999999999998887765


Q ss_pred             ----cCCcEEEeCCCcH-HHHHHHHHhCCCC-e-----EEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecC
Q 044498          196 ----FEIECRLVGEKAP-AAFSRKAVTSTDN-F-----EMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGS  260 (366)
Q Consensus       196 ----~~~~~~i~r~~~~-~~~~~~~~~~~~~-~-----~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~  260 (366)
                          +++++..+.++.+ ..+.......... .     ...........+...+|+|++++.++...    .++.+.+.+
T Consensus       224 l~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  303 (319)
T 2ptg_A          224 AGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN  303 (319)
T ss_dssp             HHHHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence                4798888866543 2222211100000 0     00001111223568999999999998642    578889887


Q ss_pred             CCc
Q 044498          261 DEM  263 (366)
Q Consensus       261 ~~~  263 (366)
                      |..
T Consensus       304 G~~  306 (319)
T 2ptg_A          304 GLH  306 (319)
T ss_dssp             TCT
T ss_pred             Cce
Confidence            753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.48  E-value=3.1e-13  Score=123.68  Aligned_cols=217  Identities=10%  Similarity=-0.021  Sum_probs=133.6

Q ss_pred             CCCeEEEEcC--CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc----------ccc---ccc--cc---cceEEE
Q 044498           22 GKLRISSIGV--GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN----------EHM---MED--MF---CHEFHL   81 (366)
Q Consensus        22 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~----------~~~---~~~--~~---~v~~~~   81 (366)
                      .++++|||||  +|.||++++++|+++|++         |++++|++.          ...   ...  ..   .+.++.
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~---------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGAR---------VALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYP   78 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCE---------EEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEE
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCE---------EEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccc
Confidence            4578999999  899999999999999999         999876420          000   000  00   023444


Q ss_pred             cc------------CCC--------hhHHHhhh-------cCCCEEEEcccccC--Ccccccc---CcchhhhhhHHHHH
Q 044498           82 VD------------LRV--------MDNCLRMT-------SGVDNMSNLAADMG--GMGFIQS---NHSVIMYKNTTISF  129 (366)
Q Consensus        82 ~D------------~~~--------~~~l~~~~-------~~~d~vi~~a~~~~--~~~~~~~---~~~~~~~~nv~~~~  129 (366)
                      +|            +++        .+++.+++       .++|++||+||...  .......   +....+++|+.++.
T Consensus        79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  158 (315)
T 2o2s_A           79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV  158 (315)
T ss_dssp             CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence            43            332        33344333       36999999999642  1111222   23456889999999


Q ss_pred             HHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC-CchHHHHHHHHHHHHHHHHH----cCCcEEEeC
Q 044498          130 DMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ-DAYGLEKLATEGLCKHYTKD----FEIECRLVG  204 (366)
Q Consensus       130 ~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~-~~Y~~sK~~~E~~l~~~~~~----~~~~~~i~r  204 (366)
                      ++++++...=.+..+||++||...+...               ... ..|+.+|...+.+.+.++.+    +++++..+.
T Consensus       159 ~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~  223 (315)
T 2o2s_A          159 SLLQHFGPIMNEGGSAVTLSYLAAERVV---------------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAIS  223 (315)
T ss_dssp             HHHHHHSTTEEEEEEEEEEEEGGGTSCC---------------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             HHHHHHHHHHhcCCEEEEEecccccccC---------------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEe
Confidence            9999997641111289999997543221               112 36999999999999887765    478888886


Q ss_pred             CCcH-HHHHHHHHhCCCC-e--EE---ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          205 EKAP-AAFSRKAVTSTDN-F--EM---WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       205 ~~~~-~~~~~~~~~~~~~-~--~i---~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++.+ ..+.......... .  ..   .........+...+|+|++++.++...    .++.+.+.+|.
T Consensus       224 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          224 AGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             ECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            6544 2222221100000 0  00   000001123567999999999998642    57888888775

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.47  E-value=3.5e-13  Score=124.07  Aligned_cols=161  Identities=10%  Similarity=0.031  Sum_probs=109.4

Q ss_pred             CCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC-------------cc--ccc---cccccceEEEc
Q 044498           23 KLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNK-------------NE--HMM---EDMFCHEFHLV   82 (366)
Q Consensus        23 ~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~-------------~~--~~~---~~~~~v~~~~~   82 (366)
                      ++++|||||++  .||.+++++|.++|++         |++.++.+             ..  ...   .....+.++.+
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~---------Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVK---------IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPF   72 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE---------EEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEEC
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCE---------EEEEecCccccccccchHHHHHHHHHHHhhcccccccccccc
Confidence            56899999875  9999999999999999         98766443             00  000   01122467888


Q ss_pred             cCCCh--h------------------HHHhhh-------cCCCEEEEcccccC--Ccccccc---CcchhhhhhHHHHHH
Q 044498           83 DLRVM--D------------------NCLRMT-------SGVDNMSNLAADMG--GMGFIQS---NHSVIMYKNTTISFD  130 (366)
Q Consensus        83 D~~~~--~------------------~l~~~~-------~~~d~vi~~a~~~~--~~~~~~~---~~~~~~~~nv~~~~~  130 (366)
                      |+++.  +                  ++.+++       .++|++||+||...  .......   +....+++|+.++..
T Consensus        73 Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  152 (329)
T 3lt0_A           73 DASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLIS  152 (329)
T ss_dssp             CTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHH
Confidence            88776  5                  555543       26899999999632  1112222   234568899999999


Q ss_pred             HHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCC-chHHHHHHHHHHHHHHHHH----cCCcEEEeCC
Q 044498          131 MLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQD-AYGLEKLATEGLCKHYTKD----FEIECRLVGE  205 (366)
Q Consensus       131 ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~-~Y~~sK~~~E~~l~~~~~~----~~~~~~i~r~  205 (366)
                      +.+++...=.++.++|++||...+..               ..... .|+.+|++.+.+.+.++.+    +++++..+.+
T Consensus       153 l~~~~~p~m~~~g~Iv~isS~~~~~~---------------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~P  217 (329)
T 3lt0_A          153 LCKYFVNIMKPQSSIISLTYHASQKV---------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISA  217 (329)
T ss_dssp             HHHHHGGGEEEEEEEEEEECGGGTSC---------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHhhCCeEEEEeCccccCC---------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEec
Confidence            99998765211128999999654321               11232 7999999999988887665    4788877755


Q ss_pred             Cc
Q 044498          206 KA  207 (366)
Q Consensus       206 ~~  207 (366)
                      +.
T Consensus       218 G~  219 (329)
T 3lt0_A          218 GP  219 (329)
T ss_dssp             CC
T ss_pred             ce
Confidence            43

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.45  E-value=4.1e-13  Score=130.91  Aligned_cols=212  Identities=10%  Similarity=-0.002  Sum_probs=142.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE--eCCCcc------------c-------cccccccceEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS--DWNKNE------------H-------MMEDMFCHEFH   80 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~--~r~~~~------------~-------~~~~~~~v~~~   80 (366)
                      ..+++|||||+|.||.+++++|.++|.+         ++++  +|+...            .       .......+.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~---------~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~  320 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAG---------HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVV  320 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCC---------EEEEEECCCC---------------CHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCC---------EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEE
Confidence            5678999999999999999999999987         5544  666422            1       01122357899


Q ss_pred             EccCCChhHHHhhhc------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcC-----CCceeEE
Q 044498           81 LVDLRVMDNCLRMTS------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNG-----VMSLTFF  146 (366)
Q Consensus        81 ~~D~~~~~~l~~~~~------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~-----~~~~r~I  146 (366)
                      .+|++|.+++.++++      .+|+|||+||..........+   ....+.+|+.++.++.+++....     ..  +||
T Consensus       321 ~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~--~iV  398 (525)
T 3qp9_A          321 TCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP--VLV  398 (525)
T ss_dssp             ECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC--EEE
T ss_pred             ECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC--EEE
Confidence            999999999988875      369999999976532222222   24458899999999999998876     66  899


Q ss_pred             EEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHH-HH-----HHHHHhCCC
Q 044498          147 FVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA-AF-----SRKAVTSTD  220 (366)
Q Consensus       147 ~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~-~~-----~~~~~~~~~  220 (366)
                      ++||...+-..               .....|+.+|...+.+..++. ..|++++.+.++.+. .+     ....+.+. 
T Consensus       399 ~~SS~a~~~g~---------------~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~-  461 (525)
T 3qp9_A          399 LFSSVAAIWGG---------------AGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSRVTEGATGERLRRL-  461 (525)
T ss_dssp             EEEEGGGTTCC---------------TTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSGGGSSHHHHHHHHT-
T ss_pred             EECCHHHcCCC---------------CCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCccccccccchhhHHHHHhc-
Confidence            99996543211               225579999999888765543 348888888544331 11     01111100 


Q ss_pred             CeEEecCCcceeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHH
Q 044498          221 NFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILS  275 (366)
Q Consensus       221 ~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~  275 (366)
                             +   ...+..+++++++..++..+...+.- .   .+.+..+...+..
T Consensus       462 -------g---~~~l~pee~a~~l~~~l~~~~~~v~v-~---~~dw~~~~~~~~~  502 (525)
T 3qp9_A          462 -------G---LRPLAPATALTALDTALGHGDTAVTI-A---DVDWSSFAPGFTT  502 (525)
T ss_dssp             -------T---BCCBCHHHHHHHHHHHHHHTCSEEEE-C---CBCHHHHHHHHHS
T ss_pred             -------C---CCCCCHHHHHHHHHHHHhCCCCeEEE-E---eCCHHHHHhhccc
Confidence                   0   12467999999999999876444332 2   3566666655443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.31  E-value=1.5e-11  Score=121.82  Aligned_cols=202  Identities=15%  Similarity=0.150  Sum_probs=131.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEEccC-CChhHHH-hh--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDL-RVMDNCL-RM--   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~-~~~~~l~-~~--   93 (366)
                      +++.++||||++.||.++++.|.++|++         |++.++.......    .....+..+.+|+ .+.+.+. .+  
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~---------Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~  391 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAK---------VVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVID  391 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCE---------EEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHH
Confidence            4578999999999999999999999999         9998864322110    1112235566787 5544322 22  


Q ss_pred             -hcCCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccc-cCCCCCCCCCc
Q 044498           94 -TSGVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACI-YPEFKQLDTDV  164 (366)
Q Consensus        94 -~~~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~v-yg~~~~~~~~~  164 (366)
                       +.++|++||+||..........   +.+..+++|+.++..+.+++..    .+-.  ++|++||..- ++.        
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G--~IVnisS~ag~~~~--------  461 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG--RIINITSTSGIYGN--------  461 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCHHHHSCC--------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEECChhhccCC--------
Confidence             3479999999997643222222   3345588999998888877654    3334  8999999643 221        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                              .....|+.+|.....+.+.++.++   |+++..+.|.....+......         .  ........+|++
T Consensus       462 --------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~~T~m~~~~~~---------~--~~~~~~~pe~vA  522 (604)
T 2et6_A          462 --------FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHAETAMTLSIMR---------E--QDKNLYHADQVA  522 (604)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCCC--------------------CCSSCGGGTH
T ss_pred             --------CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCCCCccccccCc---------h--hhccCCCHHHHH
Confidence                    124579999999999999888775   677777755432211111110         0  011245789999


Q ss_pred             HHHHHHHhcC---CCCcEEecCC
Q 044498          242 EGVLRLIKSD---FREPLNIGSD  261 (366)
Q Consensus       242 ~~~~~~l~~~---~~~~~~i~~~  261 (366)
                      .++..++...   .++++.+.+|
T Consensus       523 ~~v~~L~s~~~~itG~~~~vdGG  545 (604)
T 2et6_A          523 PLLVYLGTDDVPVTGETFEIGGG  545 (604)
T ss_dssp             HHHHHTTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHhCCccCCCCcEEEECCC
Confidence            9999988542   4677777765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.29  E-value=5.3e-12  Score=97.73  Aligned_cols=95  Identities=19%  Similarity=0.175  Sum_probs=77.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      +||+|+|+|+ |++|+++++.|.+.| ++         |++++|++.+.......++.++.+|+.+.+.+.++++++|+|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~---------v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   73 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYS---------VTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAV   73 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEE---------EEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCce---------EEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence            4678999999 999999999999999 88         999999765443333446788999999999999999999999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      ||+++..                   ....+++++.+.+++  +|.+
T Consensus        74 i~~~~~~-------------------~~~~~~~~~~~~g~~--~~~~   99 (118)
T 3ic5_A           74 ISAAPFF-------------------LTPIIAKAAKAAGAH--YFDL   99 (118)
T ss_dssp             EECSCGG-------------------GHHHHHHHHHHTTCE--EECC
T ss_pred             EECCCch-------------------hhHHHHHHHHHhCCC--EEEe
Confidence            9999721                   246789999999986  4443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.29  E-value=3.9e-11  Score=118.89  Aligned_cols=218  Identities=12%  Similarity=0.050  Sum_probs=141.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC---------ccccc----cccccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK---------NEHMM----EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~---------~~~~~----~~~~~v~~~~~D~~~~~   88 (366)
                      .++.++||||++.||+++++.|.++|++         |++.++..         .....    ....+.. ..+|+.|.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~---------Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~   76 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAK---------VVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVL   76 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCE---------EEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHH
Confidence            5678999999999999999999999999         99988754         11100    0111112 235777664


Q ss_pred             HHHhh-------hcCCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccc-
Q 044498           89 NCLRM-------TSGVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACI-  153 (366)
Q Consensus        89 ~l~~~-------~~~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~v-  153 (366)
                      ++.++       +.++|++||+||..........   +.+..+++|+.++..+.+++..    .+-.  ++|++||..- 
T Consensus        77 ~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G--~IVnisS~ag~  154 (604)
T 2et6_A           77 DGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYG--RIVNTSSPAGL  154 (604)
T ss_dssp             CHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--EEEEECCHHHc
Confidence            33332       2479999999997542222222   3345688999998888777643    3434  8999999643 


Q ss_pred             cCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcc
Q 044498          154 YPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       154 yg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      ++.                .....|+.+|.....+.+.++.++   |+++..+.|.....+....    .+       ..
T Consensus       155 ~~~----------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~~T~m~~~~----~~-------~~  207 (604)
T 2et6_A          155 YGN----------------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESI----MP-------PP  207 (604)
T ss_dssp             HCC----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCHHHHTT----SC-------HH
T ss_pred             CCC----------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCCcCcccccc----CC-------hh
Confidence            332                123479999999999999988875   6777777554433332210    00       01


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC---CCCcEEecCC------------------CcccHHHHHHHHHHhcC
Q 044498          231 TRSLTFIDECVEGVLRLIKSD---FREPLNIGSD------------------EMVSINEMAEIILSFEN  278 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~------------------~~~s~~el~~~i~~~~g  278 (366)
                      .......+|++.++..++...   .++++.+.+|                  ...+..++.+.+.++..
T Consensus       208 ~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          208 MLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             HHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             hhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            112357899999999998653   4666666554                  23567888887776654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.28  E-value=4.3e-11  Score=128.84  Aligned_cols=207  Identities=10%  Similarity=-0.018  Sum_probs=133.2

Q ss_pred             CCCCeEEEEcCCCc-hhHHHHHHHHHcCCCCCCCCCccEEEEEe-CCCccccc----------cccccceEEEccCCChh
Q 044498           21 SGKLRISSIGVGGF-IPSNIARRLKSERHYSTSIPNALYIIASD-WNKNEHMM----------EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        21 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~~~~~~~~~~V~~~~-r~~~~~~~----------~~~~~v~~~~~D~~~~~   88 (366)
                      ..++++|||||+|. ||.++++.|+++|++         |++++ |+......          .....+.++.+|++|.+
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~---------Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~  743 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---------VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQ  743 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCE---------EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---------EEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHH
Confidence            35688999999999 999999999999999         99884 54432110          01234678999999998


Q ss_pred             HHHhhhc-------------CCCEEEEcccccCCc-cccccC-----cchhhhhhHHHHHHHHHHHHHcCC----CceeE
Q 044498           89 NCLRMTS-------------GVDNMSNLAADMGGM-GFIQSN-----HSVIMYKNTTISFDMLEAARMNGV----MSLTF  145 (366)
Q Consensus        89 ~l~~~~~-------------~~d~vi~~a~~~~~~-~~~~~~-----~~~~~~~nv~~~~~ll~a~~~~~~----~~~r~  145 (366)
                      ++.++++             ++|++|||||..... .....+     ....+.+|+.++..++++++....    +..+|
T Consensus       744 sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~I  823 (1887)
T 2uv8_A          744 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI  823 (1887)
T ss_dssp             HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEE
T ss_pred             HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEE
Confidence            8776642             589999999976432 122222     355688999999999998843321    01289


Q ss_pred             EEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHH-HHHHHHHcC--CcEEEeCCCcHH--HHHHHHHhCCC
Q 044498          146 FFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGL-CKHYTKDFE--IECRLVGEKAPA--AFSRKAVTSTD  220 (366)
Q Consensus       146 I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~-l~~~~~~~~--~~~~i~r~~~~~--~~~~~~~~~~~  220 (366)
                      |++||...+..                 ....|+.+|...+.+ .+.++.+++  +++..+.++.+.  .++..  . ..
T Consensus       824 VnISS~ag~~g-----------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~--~-~~  883 (1887)
T 2uv8_A          824 LPMSPNHGTFG-----------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA--N-NI  883 (1887)
T ss_dssp             EEECSCTTCSS-----------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-------C-CT
T ss_pred             EEEcChHhccC-----------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc--c-hh
Confidence            99999643211                 234699999999998 565665554  556555554432  33221  0 00


Q ss_pred             CeEEecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCcEEe
Q 044498          221 NFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREPLNI  258 (366)
Q Consensus       221 ~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i  258 (366)
                      ....... ... .+...+|+|.+++.++...     .++.+.+
T Consensus       884 ~~~~~~~-~pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          884 IAEGIEK-MGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             THHHHHT-TSC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             HHHHHHh-cCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            0000000 011 2347999999999988653     3677766

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.24  E-value=1.2e-10  Score=125.22  Aligned_cols=212  Identities=11%  Similarity=0.007  Sum_probs=135.8

Q ss_pred             CCCCeEEEEcCCCc-hhHHHHHHHHHcCCCCCCCCCccEEEEEe-CCCccccc-------c---ccccceEEEccCCChh
Q 044498           21 SGKLRISSIGVGGF-IPSNIARRLKSERHYSTSIPNALYIIASD-WNKNEHMM-------E---DMFCHEFHLVDLRVMD   88 (366)
Q Consensus        21 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~~~~~~~~~~V~~~~-r~~~~~~~-------~---~~~~v~~~~~D~~~~~   88 (366)
                      .+++++|||||+|. ||.++++.|+++|++         |++++ |.......       .   ....+.++.+|++|.+
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~---------VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~e  720 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAK---------VIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQ  720 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCE---------EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---------EEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHH
Confidence            35688999999999 999999999999999         99885 44322110       0   1234678999999999


Q ss_pred             HHHhhhc-----------CCCEEEEcccccCCc-ccccc-----CcchhhhhhHHHHHHHHHHHH--Hc----CCCceeE
Q 044498           89 NCLRMTS-----------GVDNMSNLAADMGGM-GFIQS-----NHSVIMYKNTTISFDMLEAAR--MN----GVMSLTF  145 (366)
Q Consensus        89 ~l~~~~~-----------~~d~vi~~a~~~~~~-~~~~~-----~~~~~~~~nv~~~~~ll~a~~--~~----~~~~~r~  145 (366)
                      ++.++++           .+|++||+||..... .....     +....+.+|+.++.+++++++  ..    +..  +|
T Consensus       721 sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G--~I  798 (1878)
T 2uv9_A          721 DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQ--VI  798 (1878)
T ss_dssp             HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEE--EC
T ss_pred             HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCC--EE
Confidence            8877652           489999999976432 12222     235568899999998887732  21    123  79


Q ss_pred             EEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH-cC--CcEEEeCCCcHH--H------HHHH
Q 044498          146 FFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD-FE--IECRLVGEKAPA--A------FSRK  214 (366)
Q Consensus       146 I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~-~~--~~~~i~r~~~~~--~------~~~~  214 (366)
                      |++||...+..                 ....|+.+|+..+.+...+..+ ++  +++..+.++.+.  .      ....
T Consensus       799 VnISS~ag~~g-----------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~  861 (1878)
T 2uv9_A          799 LPLSPNHGTFG-----------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAE  861 (1878)
T ss_dssp             CEECSCSSSSS-----------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHH
T ss_pred             EEEcchhhccC-----------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHH
Confidence            99999643211                 1346999999999987765443 22  555555433221  1      1111


Q ss_pred             HHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCcEEec--CCCc--ccHHHHHH
Q 044498          215 AVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREPLNIG--SDEM--VSINEMAE  271 (366)
Q Consensus       215 ~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i~--~~~~--~s~~el~~  271 (366)
                      ... ..+         . .....+|+|.+++.++...     .++.+.+.  +|..  ..+.++..
T Consensus       862 ~~~-~~p---------l-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~  916 (1878)
T 2uv9_A          862 GVE-KLG---------V-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMT  916 (1878)
T ss_dssp             HHH-TTT---------C-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHH
T ss_pred             HHH-hcC---------C-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHH
Confidence            222 111         1 1347999999999988543     36777763  4432  34444443

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.18  E-value=4.4e-11  Score=125.03  Aligned_cols=208  Identities=10%  Similarity=-0.024  Sum_probs=130.6

Q ss_pred             CCCCCCCeEEEEcCCCc-hhHHHHHHHHHcCCCCCCCCCccEEEEE-eCCCccccc----c------ccccceEEEccCC
Q 044498           18 HWPSGKLRISSIGVGGF-IPSNIARRLKSERHYSTSIPNALYIIAS-DWNKNEHMM----E------DMFCHEFHLVDLR   85 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~-iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~~~~~~~----~------~~~~v~~~~~D~~   85 (366)
                      .|..+++++|||||+|. ||.++++.|+++|++         |+++ +|.......    .      ....+.++.+|++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~---------VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVT  541 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAK---------VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQG  541 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCE---------EEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSS
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCE---------EEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCC
Confidence            33345678999999998 999999999999999         9888 454332111    0      1224678999999


Q ss_pred             ChhHHHhhhc-------------CCCEEEEcccccCCc-ccccc-----CcchhhhhhHHHHHHHHHHHHH--c----CC
Q 044498           86 VMDNCLRMTS-------------GVDNMSNLAADMGGM-GFIQS-----NHSVIMYKNTTISFDMLEAARM--N----GV  140 (366)
Q Consensus        86 ~~~~l~~~~~-------------~~d~vi~~a~~~~~~-~~~~~-----~~~~~~~~nv~~~~~ll~a~~~--~----~~  140 (366)
                      |.+++.++++             .+|++||+||..... .....     +....+.+|+.++.+++++++.  .    +.
T Consensus       542 D~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krgg  621 (1688)
T 2pff_A          542 SKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPA  621 (1688)
T ss_dssp             STTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCE
T ss_pred             CHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCC
Confidence            9988777642             489999999975432 11112     2345688999999999998733  2    11


Q ss_pred             CceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHH-HHHHHHHcC--CcEEEeCCCcHH--HHHHHH
Q 044498          141 MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGL-CKHYTKDFE--IECRLVGEKAPA--AFSRKA  215 (366)
Q Consensus       141 ~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~-l~~~~~~~~--~~~~i~r~~~~~--~~~~~~  215 (366)
                      .  +||++||...+..                 ....|+.+|+..+.+ .+..+.+++  +++..+.++.+.  .++.. 
T Consensus       622 G--rIVnISSiAG~~G-----------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~-  681 (1688)
T 2pff_A          622 Q--VILPMSPNHGTFG-----------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-  681 (1688)
T ss_dssp             E--ECCCCCSCTTTSS-----------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT-
T ss_pred             C--EEEEEEChHhccC-----------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC-
Confidence            3  7999999643211                 234699999999988 343444333  444444444331  11110 


Q ss_pred             HhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCcEEe
Q 044498          216 VTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREPLNI  258 (366)
Q Consensus       216 ~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~i  258 (366)
                         .....-....... .....+|+|++++.++...     .++.+.+
T Consensus       682 ---~e~~~~~l~~ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          682 ---NNIIAEGIEKMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             ---TTTCSTTTSSSSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             ---chHHHHHHHhCCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence               0000000000111 2347899999999998654     3666665

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.17  E-value=3e-10  Score=105.22  Aligned_cols=164  Identities=10%  Similarity=-0.096  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEEeCCCcccc------------------ccccccceEEE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIASDWNKNEHM------------------MEDMFCHEFHL   81 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~~r~~~~~~------------------~~~~~~v~~~~   81 (366)
                      ..++++|||||++.||.++++.|.+ .|.+         |+++++......                  ......+..+.
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~---------Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~  115 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGAD---------TLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSIN  115 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCE---------EEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCE---------EEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEE
Confidence            4678899999999999999999999 9999         999887654321                  01122356889


Q ss_pred             ccCCChhHHHhhhc-------CCCEEEEcccccC------------Cccc-------------------------cccCc
Q 044498           82 VDLRVMDNCLRMTS-------GVDNMSNLAADMG------------GMGF-------------------------IQSNH  117 (366)
Q Consensus        82 ~D~~~~~~l~~~~~-------~~d~vi~~a~~~~------------~~~~-------------------------~~~~~  117 (366)
                      +|+++.+++.++++       ++|++||+||...            ....                         ...+.
T Consensus       116 ~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~  195 (405)
T 3zu3_A          116 GDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEI  195 (405)
T ss_dssp             SCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHH
Confidence            99999988776653       6899999999631            0000                         11122


Q ss_pred             chhhhhhHHHHH-HHHHHHHHcCC--CceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 044498          118 SVIMYKNTTISF-DMLEAARMNGV--MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK  194 (366)
Q Consensus       118 ~~~~~~nv~~~~-~ll~a~~~~~~--~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~  194 (366)
                      +..+++|..+.. .+++++.....  +..++|.+||..-.-   ..          +......|+.+|...+.+.+.++.
T Consensus       196 ~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~---~~----------p~~~~~aY~AaKaal~~ltrsLA~  262 (405)
T 3zu3_A          196 DSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKI---TH----------DIYWNGSIGAAKKDLDQKVLAIRE  262 (405)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGG---GT----------TTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhC---cC----------CCccchHHHHHHHHHHHHHHHHHH
Confidence            334566666654 55665543221  112799999964211   01          111236899999999999999888


Q ss_pred             Hc----CCcEEEeCCC
Q 044498          195 DF----EIECRLVGEK  206 (366)
Q Consensus       195 ~~----~~~~~i~r~~  206 (366)
                      ++    |+++..+-++
T Consensus       263 Ela~~~GIRVNaVaPG  278 (405)
T 3zu3_A          263 SLAAHGGGDARVSVLK  278 (405)
T ss_dssp             HHHTTTSCEEEEEECC
T ss_pred             HhCcccCeEEEEEEeC
Confidence            75    6777666443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.11  E-value=4.6e-10  Score=114.53  Aligned_cols=156  Identities=10%  Similarity=0.038  Sum_probs=112.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHH-HcCCCCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChhHH
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLK-SERHYSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~-~~g~~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~~l   90 (366)
                      ..++.+|||||+|.||..+++.|. ++|.++        |+.++|+.....         ......+.++.+|++|.+++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~--------vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v  599 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRN--------LVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETL  599 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCE--------EEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcE--------EEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Confidence            356889999999999999999999 789741        888888743211         11233568899999999999


Q ss_pred             Hhhhc------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc-cCCCCCC
Q 044498           91 LRMTS------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI-YPEFKQL  160 (366)
Q Consensus        91 ~~~~~------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v-yg~~~~~  160 (366)
                      .++++      .+|+|||+||..........+.   ...+..|+.++.++.+++.. ..   +||++||.+- .|.    
T Consensus       600 ~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l---~iV~~SS~ag~~g~----  671 (795)
T 3slk_A          600 AKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV---ALVLFSSVSGVLGS----  671 (795)
T ss_dssp             HHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS---EEEEEEETHHHHTC----
T ss_pred             HHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC---EEEEEccHHhcCCC----
Confidence            88775      4699999999765432222333   44588999999999998832 22   7999999653 332    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE  205 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~  205 (366)
                                  .....|+.+|...+.+..+.. ..|+++..+.+
T Consensus       672 ------------~g~~~YaAaka~~~alA~~~~-~~Gi~v~sI~p  703 (795)
T 3slk_A          672 ------------GGQGNYAAANSFLDALAQQRQ-SRGLPTRSLAW  703 (795)
T ss_dssp             ------------SSCHHHHHHHHHHHHHHHHHH-HTTCCEEEEEE
T ss_pred             ------------CCCHHHHHHHHHHHHHHHHHH-HcCCeEEEEEC
Confidence                        124579999988777666654 45899887743

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.07  E-value=1.4e-10  Score=106.53  Aligned_cols=155  Identities=10%  Similarity=0.047  Sum_probs=104.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-------CCCCCCCccEEEEEeCC----Ccccc----ccccccceEEEccCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-------YSTSIPNALYIIASDWN----KNEHM----MEDMFCHEFHLVDLRV   86 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-------~~~~~~~~~~V~~~~r~----~~~~~----~~~~~~v~~~~~D~~~   86 (366)
                      ++|||+||||+||||++++..|+..|.       +         |.++++.    ..+..    ........+ ..++..
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~e---------v~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~   73 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVI---------LQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTA   73 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEE---------EEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCE---------EEEEcCCCccccccchhhHHHHhhhcccc-cCcEEE
Confidence            457999999999999999999998875       5         8888876    22111    011110122 245555


Q ss_pred             hhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC-CCceeEEEEeccc---ccCCCCCCCC
Q 044498           87 MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG-VMSLTFFFVSSAC---IYPEFKQLDT  162 (366)
Q Consensus        87 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~r~I~~SS~~---vyg~~~~~~~  162 (366)
                      ..++.++++++|+|||+||...   ....+..+++..|+.++.++++++.+++ .+ .+||++|...   +|-..     
T Consensus        74 ~~~~~~al~~aD~Vi~~ag~~~---~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~-a~ii~~SNPv~~~t~~~~-----  144 (329)
T 1b8p_A           74 HADPMTAFKDADVALLVGARPR---GPGMERKDLLEANAQIFTVQGKAIDAVASRN-IKVLVVGNPANTNAYIAM-----  144 (329)
T ss_dssp             ESSHHHHTTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTT-CEEEECSSSHHHHHHHHH-----
T ss_pred             ecCcHHHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEEccCchHHHHHHHH-----
Confidence            5667778899999999999643   2233556788999999999999999984 43 3788888621   00000     


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIE  199 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~  199 (366)
                        ....  ...+...++.+++...++...+++..+++
T Consensus       145 --~~~~--~~p~~~v~g~t~Ld~~r~~~~la~~lgv~  177 (329)
T 1b8p_A          145 --KSAP--SLPAKNFTAMLRLDHNRALSQIAAKTGKP  177 (329)
T ss_dssp             --HTCT--TSCGGGEEECCHHHHHHHHHHHHHHHTCC
T ss_pred             --HHcC--CCCHHHEEEeecHHHHHHHHHHHHHhCcC
Confidence              0000  11233468888888888888888887764

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.05  E-value=9.5e-10  Score=102.78  Aligned_cols=162  Identities=10%  Similarity=-0.064  Sum_probs=106.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEEeCCCccccc------------------cccccceEEEc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIASDWNKNEHMM------------------EDMFCHEFHLV   82 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~~r~~~~~~~------------------~~~~~v~~~~~   82 (366)
                      .++++|||||++.||.++++.|.+ .|.+         |++++|.......                  .....+..+.+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~---------Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~  130 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGAD---------TLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSING  130 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCE---------EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCE---------EEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEe
Confidence            468899999999999999999999 9999         9999887543221                  11223568899


Q ss_pred             cCCChhHHHhhh--------cCCCEEEEccccc------------CCcccc----------------------ccCc---
Q 044498           83 DLRVMDNCLRMT--------SGVDNMSNLAADM------------GGMGFI----------------------QSNH---  117 (366)
Q Consensus        83 D~~~~~~l~~~~--------~~~d~vi~~a~~~------------~~~~~~----------------------~~~~---  117 (366)
                      |+++.+++.+++        .++|++||+||..            +.....                      ..+.   
T Consensus       131 Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~  210 (422)
T 3s8m_A          131 DAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEI  210 (422)
T ss_dssp             CTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHH
Confidence            999998766553        3589999999862            000000                      0111   


Q ss_pred             chhhhhhHHHHH-HHHHHHHHcCC--CceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHH
Q 044498          118 SVIMYKNTTISF-DMLEAARMNGV--MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK  194 (366)
Q Consensus       118 ~~~~~~nv~~~~-~ll~a~~~~~~--~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~  194 (366)
                      ...+.+|..+.. .+++++.....  +..++|.+||..-.-   ..          +......|+.+|...+.+.+.++.
T Consensus       211 ~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~---~~----------p~~~~~aY~ASKaAl~~lTrsLA~  277 (422)
T 3s8m_A          211 EDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEI---TW----------PIYWHGALGKAKVDLDRTAQRLNA  277 (422)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG---GH----------HHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc---cC----------CCccchHHHHHHHHHHHHHHHHHH
Confidence            223445554443 56666554321  112799999964211   00          111135799999999999999888


Q ss_pred             Hc---CCcEEEeCC
Q 044498          195 DF---EIECRLVGE  205 (366)
Q Consensus       195 ~~---~~~~~i~r~  205 (366)
                      ++   |+++..+.+
T Consensus       278 Ela~~GIRVNaVaP  291 (422)
T 3s8m_A          278 RLAKHGGGANVAVL  291 (422)
T ss_dssp             HHHTTTCEEEEEEE
T ss_pred             HhCccCEEEEEEEc
Confidence            75   788777633

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.05  E-value=2.3e-09  Score=100.81  Aligned_cols=164  Identities=10%  Similarity=-0.017  Sum_probs=105.9

Q ss_pred             CCCCeEEEEcCCCchhHH--HHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------------------ccccccceEE
Q 044498           21 SGKLRISSIGVGGFIPSN--IARRLKSERHYSTSIPNALYIIASDWNKNEHM------------------MEDMFCHEFH   80 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~--l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------------------~~~~~~v~~~   80 (366)
                      ..++++|||||++.||.+  +++.|.++|++         |++++|......                  ......+..+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~---------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  128 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAH---------TIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNF  128 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCE---------EEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCE---------EEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEE
Confidence            467899999999999999  99999999999         999988654321                  0112245788


Q ss_pred             EccCCChhHHHhhhc-------CCCEEEEcccccC------------Ccccc----------------------ccCc--
Q 044498           81 LVDLRVMDNCLRMTS-------GVDNMSNLAADMG------------GMGFI----------------------QSNH--  117 (366)
Q Consensus        81 ~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~------------~~~~~----------------------~~~~--  117 (366)
                      .+|+++.+++.++++       ++|++||+||...            .....                      ..+.  
T Consensus       129 ~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~  208 (418)
T 4eue_A          129 IEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEE  208 (418)
T ss_dssp             ESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHH
T ss_pred             EeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHH
Confidence            999999988776653       5899999999630            00000                      0111  


Q ss_pred             -chhhhhhHHHHH-HHHHHHHHcCC--CceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHH
Q 044498          118 -SVIMYKNTTISF-DMLEAARMNGV--MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYT  193 (366)
Q Consensus       118 -~~~~~~nv~~~~-~ll~a~~~~~~--~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~  193 (366)
                       ...+.+|..+.. .+++++.....  +..++|.+||..-.-   ..          +......|+.+|.+.+.+.+.++
T Consensus       209 ~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~---~~----------p~~~~~aY~ASKaAL~~ltrsLA  275 (418)
T 4eue_A          209 IEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR---TY----------KIYREGTIGIAKKDLEDKAKLIN  275 (418)
T ss_dssp             HHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG---GT----------TTTTTSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC---CC----------CccccHHHHHHHHHHHHHHHHHH
Confidence             222444444333 55565554331  112799999853211   01          11223789999999999888887


Q ss_pred             HH----cCCcEEEeCCC
Q 044498          194 KD----FEIECRLVGEK  206 (366)
Q Consensus       194 ~~----~~~~~~i~r~~  206 (366)
                      .+    +|+++..+-++
T Consensus       276 ~ELa~~~GIrVN~V~PG  292 (418)
T 4eue_A          276 EKLNRVIGGRAFVSVNK  292 (418)
T ss_dssp             HHHHHHHSCEEEEEECC
T ss_pred             HHhCCccCeEEEEEECC
Confidence            66    46787777443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.04  E-value=7.9e-10  Score=101.20  Aligned_cols=114  Identities=11%  Similarity=-0.028  Sum_probs=82.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccc--cccccce-EEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMM--EDMFCHE-FHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~-~~~~D~~~~~~l~~~~~~   96 (366)
                      ++|||+||||+|++|+.++..|+.+|  ++         |.++++.+.....  ....... .+.+ +.+..++.+++++
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~e---------v~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~g   76 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSV---------LHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTG   76 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEE---------EEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCE---------EEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCC
Confidence            34799999999999999999999988  78         9999876541110  1110011 1222 2334567778899


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +|+|||+|+...   ........+...|+.++.++++++.+.+.+  .+|+++|
T Consensus        77 aDvVi~~ag~~~---~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~--~~viv~S  125 (326)
T 1smk_A           77 MDLIIVPAGVPR---KPGMTRDDLFKINAGIVKTLCEGIAKCCPR--AIVNLIS  125 (326)
T ss_dssp             CSEEEECCCCCC---CSSCCCSHHHHHHHHHHHHHHHHHHHHCTT--SEEEECC
T ss_pred             CCEEEEcCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCC--eEEEEEC
Confidence            999999999543   223345677899999999999999999877  7888777

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.87  E-value=1.3e-08  Score=81.14  Aligned_cols=100  Identities=10%  Similarity=0.109  Sum_probs=74.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      +|++|+|+|+ |.+|+.+++.|.+.|++         |++++++..........+..++.+|..+.+.+.++ +.++|+|
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~---------v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~v   74 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHE---------VLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYV   74 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCC---------CEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEE
Confidence            4568999998 99999999999999999         99999875543222223457788999998888776 6789999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      |++++..             ...|    ..+...++..+.+  ++|..++
T Consensus        75 i~~~~~~-------------~~~~----~~~~~~~~~~~~~--~ii~~~~  105 (144)
T 2hmt_A           75 IVAIGAN-------------IQAS----TLTTLLLKELDIP--NIWVKAQ  105 (144)
T ss_dssp             EECCCSC-------------HHHH----HHHHHHHHHTTCS--EEEEECC
T ss_pred             EECCCCc-------------hHHH----HHHHHHHHHcCCC--eEEEEeC
Confidence            9988721             0122    2466777788877  7777665

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.85  E-value=1.2e-08  Score=115.23  Aligned_cols=156  Identities=13%  Similarity=0.057  Sum_probs=106.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .+++++||||+|.||.++++.|.++|.++        |++++|+.....         ......+.++.+|+++.+++.+
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~--------vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~ 1954 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQK--------LVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARS 1954 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCE--------EEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCE--------EEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHH
Confidence            56789999999999999999999999861        566677654321         0112346788899999988877


Q ss_pred             hhc------CCCEEEEcccccCCcc---ccccCcchhhhhhHHHHHHHHHHHHHc--CCCceeEEEEecccccCCCCCCC
Q 044498           93 MTS------GVDNMSNLAADMGGMG---FIQSNHSVIMYKNTTISFDMLEAARMN--GVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        93 ~~~------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      +++      .+|++||+||......   ....+....+++|+.++.++.+++...  ...  +||++||..-.-..    
T Consensus      1955 ~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g--~iV~iSS~ag~~g~---- 2028 (2512)
T 2vz8_A         1955 LITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELD--YFVIFSSVSCGRGN---- 2028 (2512)
T ss_dssp             HHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCC--EEEEECCHHHHTTC----
T ss_pred             HHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--EEEEecchhhcCCC----
Confidence            653      5899999999653211   122334556889999999998887764  235  89999996432111    


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEe
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV  203 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~  203 (366)
                                 .....|+.+|...+.+.+....+ |++...+
T Consensus      2029 -----------~g~~~Y~aaKaal~~l~~~rr~~-Gl~~~a~ 2058 (2512)
T 2vz8_A         2029 -----------AGQANYGFANSAMERICEKRRHD-GLPGLAV 2058 (2512)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHT-TSCCCEE
T ss_pred             -----------CCcHHHHHHHHHHHHHHHHHHHC-CCcEEEE
Confidence                       12457999999999888765443 7765444

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.85  E-value=2.2e-09  Score=97.73  Aligned_cols=155  Identities=15%  Similarity=0.045  Sum_probs=97.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeC--CCccccc----cccc-cceEEEccCCCh-hHHHhh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDW--NKNEHMM----EDMF-CHEFHLVDLRVM-DNCLRM   93 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r--~~~~~~~----~~~~-~v~~~~~D~~~~-~~l~~~   93 (366)
                      |||+||||+|++|++++..|+.+|.  +         +..+++  .......    .... .+.-...++.+. +++.++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~e---------l~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~a   71 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKD---------LVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI   71 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCE---------EEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCE---------EEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHH
Confidence            5899999999999999999998874  4         677776  3211100    0000 000011233222 235567


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                      ++++|+|||+||...   ........++..|+.++.++++++++++ +  ++|+++|-=+.-...-.   ...   ....
T Consensus        72 l~gaD~Vi~~Ag~~~---~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~--~~vlv~SNPv~~~t~~~---~k~---~~~p  139 (313)
T 1hye_A           72 IDESDVVIITSGVPR---KEGMSRMDLAKTNAKIVGKYAKKIAEIC-D--TKIFVITNPVDVMTYKA---LVD---SKFE  139 (313)
T ss_dssp             GTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHC-C--CEEEECSSSHHHHHHHH---HHH---HCCC
T ss_pred             hCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhC-C--eEEEEecCcHHHHHHHH---HHh---hCcC
Confidence            899999999999643   2233456779999999999999999999 8  78887772110000000   001   0234


Q ss_pred             CCCchHH-HHHHHHHHHHHHHHHcCCc
Q 044498          174 PQDAYGL-EKLATEGLCKHYTKDFEIE  199 (366)
Q Consensus       174 p~~~Y~~-sK~~~E~~l~~~~~~~~~~  199 (366)
                      |...+|. +.+...++....++..+++
T Consensus       140 ~~rviG~gt~LD~~r~~~~la~~lgv~  166 (313)
T 1hye_A          140 RNQVFGLGTHLDSLRFKVAIAKFFGVH  166 (313)
T ss_dssp             TTSEEECTTHHHHHHHHHHHHHHHTCC
T ss_pred             hhcEEEeCccHHHHHHHHHHHHHhCcC
Confidence            5566777 7776777777777766654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.78  E-value=4e-08  Score=78.39  Aligned_cols=74  Identities=15%  Similarity=0.122  Sum_probs=61.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      +|++|+|+|+ |.+|+++++.|.+.|++         |+++++++.........++.++.+|.++++.+.++ +.++|+|
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~---------V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~v   74 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKK---------VLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAV   74 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCC---------EEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe---------EEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEE
Confidence            4678999997 99999999999999999         99999987654333334678999999999988876 4689999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |.+.+
T Consensus        75 i~~~~   79 (141)
T 3llv_A           75 LITGS   79 (141)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            97766

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.77  E-value=5.1e-09  Score=94.85  Aligned_cols=106  Identities=11%  Similarity=0.045  Sum_probs=74.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeC--CCccccc----cc-----cccceEEEccCCChhHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDW--NKNEHMM----ED-----MFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r--~~~~~~~----~~-----~~~v~~~~~D~~~~~~l   90 (366)
                      |||+||||+|++|++++..|+..|.  +         +..+++  ...+...    ..     ...+.+.. +  +    
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~e---------l~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----   64 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADE---------VVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----   64 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSE---------EEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCE---------EEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----
Confidence            5899999999999999999998875  4         777776  3321100    00     01111111 1  1    


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      .++++++|+|||+|+....   ........+..|+.++.++++++.+++.+  .+|+++|
T Consensus        65 ~~a~~~aDvVi~~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~~~p~--~~viv~S  119 (303)
T 1o6z_A           65 YEDTAGSDVVVITAGIPRQ---PGQTRIDLAGDNAPIMEDIQSSLDEHNDD--YISLTTS  119 (303)
T ss_dssp             GGGGTTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHTTCSC--CEEEECC
T ss_pred             HHHhCCCCEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCC--cEEEEeC
Confidence            3457899999999996432   22344567899999999999999999887  7888777

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.71  E-value=7.7e-08  Score=76.28  Aligned_cols=97  Identities=14%  Similarity=0.053  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      +|+|+|+|+ |++|+.+++.|.+.|++         |+++++++....... ..++.++.+|..+.+.+.+. +.++|+|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~---------v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~v   73 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHD---------IVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMY   73 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCe---------EEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEE
Confidence            478999996 99999999999999999         999998755332222 12557888999988877654 6789999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      |++.+..              ..|    ..+...++..+.+  ++|..+
T Consensus        74 i~~~~~~--------------~~~----~~~~~~~~~~~~~--~ii~~~  102 (140)
T 1lss_A           74 IAVTGKE--------------EVN----LMSSLLAKSYGIN--KTIARI  102 (140)
T ss_dssp             EECCSCH--------------HHH----HHHHHHHHHTTCC--CEEEEC
T ss_pred             EEeeCCc--------------hHH----HHHHHHHHHcCCC--EEEEEe
Confidence            9987621              112    2456667777776  777543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.61  E-value=7e-07  Score=72.38  Aligned_cols=74  Identities=18%  Similarity=0.095  Sum_probs=60.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhh-hcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRM-TSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~-~~~~d~   99 (366)
                      ..++|+|+|+ |.+|+.+++.|.+.|++         |+++++++....... ..++.++.+|..+.+.+.++ +.++|+
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~---------V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~   87 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHS---------VVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADM   87 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCe---------EEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCE
Confidence            4578999996 99999999999999999         999999876544333 34567888999888877765 678999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||.+.+
T Consensus        88 Vi~~~~   93 (155)
T 2g1u_A           88 VFAFTN   93 (155)
T ss_dssp             EEECSS
T ss_pred             EEEEeC
Confidence            998877

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.57  E-value=5.7e-08  Score=87.31  Aligned_cols=76  Identities=9%  Similarity=-0.017  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ++++++||||+|.+|+++++.|.+.|++         |++++|+..+....     ...++.++.+|+++.+++.+++++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~---------V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  188 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAE---------VVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG  188 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh
Confidence            5679999999999999999999999999         99999875432211     112457888999999999999999


Q ss_pred             CCEEEEcccc
Q 044498           97 VDNMSNLAAD  106 (366)
Q Consensus        97 ~d~vi~~a~~  106 (366)
                      +|+|||+++.
T Consensus       189 ~DvlVn~ag~  198 (287)
T 1lu9_A          189 AHFVFTAGAI  198 (287)
T ss_dssp             CSEEEECCCT
T ss_pred             CCEEEECCCc
Confidence            9999999984

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.55  E-value=1e-07  Score=89.81  Aligned_cols=90  Identities=16%  Similarity=0.176  Sum_probs=70.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC---CCCCCCCccEEEEEeCCCccccccc----c---ccceEEEccCCChhHHHh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH---YSTSIPNALYIIASDWNKNEHMMED----M---FCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~---~~~~~~~~~~V~~~~r~~~~~~~~~----~---~~v~~~~~D~~~~~~l~~   92 (366)
                      |++|+|+|| |+||+.+++.|.+.|.   +         |.+.+|+..+.....    .   .++..+.+|+++.+++.+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~---------V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~   70 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSH---------ITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVA   70 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCE---------EEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceE---------EEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHH
Confidence            579999998 9999999999999883   6         999998765432211    0   146889999999999999


Q ss_pred             hhcC--CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           93 MTSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        93 ~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ++++  +|+|||+++...                   ...++++|.+.++.
T Consensus        71 ~l~~~~~DvVin~ag~~~-------------------~~~v~~a~l~~g~~  102 (405)
T 4ina_A           71 LINEVKPQIVLNIALPYQ-------------------DLTIMEACLRTGVP  102 (405)
T ss_dssp             HHHHHCCSEEEECSCGGG-------------------HHHHHHHHHHHTCC
T ss_pred             HHHhhCCCEEEECCCccc-------------------ChHHHHHHHHhCCC
Confidence            9886  999999998321                   24678888888874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.53  E-value=1.2e-07  Score=90.51  Aligned_cols=106  Identities=10%  Similarity=0.019  Sum_probs=75.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      .+++|+|+| +|++|+++++.|.+.|++         |++.+|+..+....  ...++..+.+|+.+.+++.++++++|+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~---------V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~Dv   71 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIK---------VTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDL   71 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCE---------EEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCE---------EEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcE
Confidence            467899998 799999999999999998         99999876432221  111356888999999999998999999


Q ss_pred             EEEcccccCCccccccCcchhhh--hh-------HHHHHHHHHHHHHcCCC
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMY--KN-------TTISFDMLEAARMNGVM  141 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~--~n-------v~~~~~ll~a~~~~~~~  141 (366)
                      |||+++.....    .-....++  .|       .....+++++|++.+++
T Consensus        72 VIn~a~~~~~~----~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           72 VISLIPYTFHA----TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             EEECCC--CHH----HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             EEECCccccch----HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            99999853210    00011111  11       23578899999999873

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.51  E-value=6.3e-07  Score=101.64  Aligned_cols=217  Identities=12%  Similarity=0.004  Sum_probs=130.9

Q ss_pred             CCCeEEEEcCCCc-hhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-----cc------cccccceEEEccCCChhH
Q 044498           22 GKLRISSIGVGGF-IPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-----MM------EDMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~-iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-----~~------~~~~~v~~~~~D~~~~~~   89 (366)
                      +++++|||||++. ||.++++.|+++|.+         |++.+|+....     ..      .....+..+.+|+++.++
T Consensus      2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~---------Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~ 2205 (3089)
T 3zen_D         2135 XDEVAVVTGASKGSIAASVVGQLLDGGAT---------VIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSD 2205 (3089)
T ss_dssp             CCCEEEEESCCTTSHHHHHHHHHHHTTCE---------EEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHH
T ss_pred             CCCEEEEeCCChhHHHHHHHHHHHHCCCE---------EEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHH
Confidence            6789999999999 999999999999999         99999876541     10      112235678999999988


Q ss_pred             HHhhh----c-------CCCEEEEcccc----cCC--c--cccccCcch----hhhhhHHHHHHHHHHHHH----cCCC-
Q 044498           90 CLRMT----S-------GVDNMSNLAAD----MGG--M--GFIQSNHSV----IMYKNTTISFDMLEAARM----NGVM-  141 (366)
Q Consensus        90 l~~~~----~-------~~d~vi~~a~~----~~~--~--~~~~~~~~~----~~~~nv~~~~~ll~a~~~----~~~~-  141 (366)
                      +.+++    +       ++|++|||||.    ...  .  .....+...    .+++|+.++..++.++..    .+.. 
T Consensus      2206 v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~ 2285 (3089)
T 3zen_D         2206 IDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIAS 2285 (3089)
T ss_dssp             HHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            77653    2       48999999996    110  0  001112222    277888888877776654    2221 


Q ss_pred             ceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH--cCCc--EEEeCCCcHH--HHH---
Q 044498          142 SLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD--FEIE--CRLVGEKAPA--AFS---  212 (366)
Q Consensus       142 ~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~--~~~~--~~i~r~~~~~--~~~---  212 (366)
                      ...+|..+|. ..+.               ......|+.+|...+.+.+.++.+  ++-.  +..+.++.+.  .++   
T Consensus      2286 ~~~ii~~~ss-~~g~---------------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~ 2349 (3089)
T 3zen_D         2286 RLHVVLPGSP-NRGM---------------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN 2349 (3089)
T ss_dssp             CEEEEEEECS-STTS---------------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT
T ss_pred             eeEEEEECCc-cccc---------------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc
Confidence            0012222221 1111               012346999999999999999998  5433  3333222221  110   


Q ss_pred             ---HHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-----CCCc--EEecCCC---cccHHHHHHHHH
Q 044498          213 ---RKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-----FREP--LNIGSDE---MVSINEMAEIIL  274 (366)
Q Consensus       213 ---~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~--~~i~~~~---~~s~~el~~~i~  274 (366)
                         ......          ... .....+|+|.+++.++...     .++.  .++.+|-   ..++.+++..+.
T Consensus      2350 ~~~~~~~~~----------~~~-r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2350 DAIVSAVEE----------AGV-TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             TTTHHHHGG----------GSC-BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             hhHHHHHHh----------cCC-CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence               111110          001 1237899999999988542     1233  3444554   358888887653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.48  E-value=3.5e-07  Score=85.07  Aligned_cols=94  Identities=19%  Similarity=0.179  Sum_probs=72.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++|||+|+|| |++|+.+++.|.+ .++         |.+.+++....... ...+..+..|+.|.+++.++++++|+||
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~---------v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi   82 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFD---------VYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVI   82 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSE---------EEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCC---------eEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEE
Confidence            6689999998 9999999988754 577         98888875433222 2235788899999999999999999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ++++..                   ....++++|.+.++   ++|=+|
T Consensus        83 ~~~p~~-------------------~~~~v~~~~~~~g~---~yvD~s  108 (365)
T 3abi_A           83 GALPGF-------------------LGFKSIKAAIKSKV---DMVDVS  108 (365)
T ss_dssp             ECCCGG-------------------GHHHHHHHHHHHTC---EEEECC
T ss_pred             EecCCc-------------------ccchHHHHHHhcCc---ceEeee
Confidence            998832                   12468899999987   576544

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.46  E-value=4.1e-07  Score=82.60  Aligned_cols=110  Identities=13%  Similarity=0.059  Sum_probs=77.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCC---hhHHHhhhcC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRV---MDNCLRMTSG   96 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~---~~~l~~~~~~   96 (366)
                      |||.|+||+|++|+.++..|+..|  ++         |.++++.+.....  .....   ..+++..   ..++.+++++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~e---------v~L~Di~~~~~~a~dL~~~~---~~~~l~~~~~t~d~~~a~~~   68 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSR---------LTLYDIAHTPGVAADLSHIE---TRATVKGYLGPEQLPDCLKG   68 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSE---------EEEEESSSHHHHHHHHTTSS---SSCEEEEEESGGGHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcE---------EEEEeCCccHHHHHHHhccC---cCceEEEecCCCCHHHHhCC
Confidence            589999999999999999999887  67         9999987621110  01100   0112221   1346667899


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +|+||++++....   ......+.+..|+..+..+++.+.+++.. .++|++|
T Consensus        69 aDvVvi~ag~~~~---~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv~s  117 (314)
T 1mld_A           69 CDVVVIPAGVPRK---PGMTRDDLFNTNATIVATLTAACAQHCPD-AMICIIS  117 (314)
T ss_dssp             CSEEEECCSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHHHCTT-SEEEECS
T ss_pred             CCEEEECCCcCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEEEC
Confidence            9999999996532   23345667899999999999999988743 3677754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.44  E-value=1.5e-06  Score=70.13  Aligned_cols=73  Identities=8%  Similarity=-0.042  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc---cc-ccccccceEEEccCCChhHHHhh-hcCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE---HM-MEDMFCHEFHLVDLRVMDNCLRM-TSGV   97 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~---~~-~~~~~~v~~~~~D~~~~~~l~~~-~~~~   97 (366)
                      .++|+|+|+ |.+|+++++.|.+.|++         |++++++...   .. .....++.++.+|.++++.+.++ ++++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~---------V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a   72 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQN---------VTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRC   72 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCC---------EEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCC---------EEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhC
Confidence            467999996 99999999999999999         9999987421   11 11123578999999999988876 7899


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |.||-+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99997766

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.40  E-value=2.8e-07  Score=84.22  Aligned_cols=122  Identities=11%  Similarity=0.011  Sum_probs=78.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc-c-----cccccccceEEEccCCChhHHHhhhcC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE-H-----MMEDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-~-----~~~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      .+||+||||+|+||++++..|...|.-  .-+..+.+..++..... .     .........+. .++.......+.+++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~--~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVF--GKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKD   79 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTT--CTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCc--cccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCC
Confidence            468999999999999999999887641  00112226677765321 0     11111111111 122222345566889


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +|+||++||...   ....+..+.+..|+..+.++++++.+++.+..++|.+|-
T Consensus        80 aDvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           80 LDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             CSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999999998542   234467788999999999999999999865334666654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.35  E-value=2.2e-06  Score=71.34  Aligned_cols=74  Identities=14%  Similarity=0.056  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh--hcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM--TSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~--~~~~d   98 (366)
                      .+++|+|+| .|.+|+.+++.|.+. |++         |+++++++.........++..+.+|.++.+.+.++  ++++|
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~---------V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad  107 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKI---------SLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK  107 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSC---------EEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCe---------EEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence            456899999 599999999999999 999         99999987654333344678899999999888877  78899


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||.+.+
T Consensus       108 ~vi~~~~  114 (183)
T 3c85_A          108 LVLLAMP  114 (183)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9997766

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.32  E-value=9.7e-07  Score=84.40  Aligned_cols=76  Identities=9%  Similarity=0.013  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++++|+|+|+ |++|+.+++.|++. |++         |++.+|+..+..... ..++..+.+|+.+.+++.++++++|+
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~---------V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~Dv   91 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDIN---------VTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDV   91 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEE---------EEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCe---------EEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCE
Confidence            5678999997 99999999999998 678         999999765432211 13457788999999889888899999


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      |||+++..
T Consensus        92 VIn~tp~~   99 (467)
T 2axq_A           92 VISLIPYT   99 (467)
T ss_dssp             EEECSCGG
T ss_pred             EEECCchh
Confidence            99999853

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.32  E-value=1.5e-06  Score=74.67  Aligned_cols=74  Identities=8%  Similarity=-0.038  Sum_probs=53.6

Q ss_pred             CCCeEEEEcC----------------CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC
Q 044498           22 GKLRISSIGV----------------GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~   85 (366)
                      .+++||||||                ||.+|.++++.|+++|++         |+.++|....... ...++..+  ++.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~---------V~lv~~~~~~~~~-~~~~~~~~--~v~   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE---------VCLITTKRALKPE-PHPNLSIR--EIT   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE---------EEEEECTTSCCCC-CCTTEEEE--ECC
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE---------EEEEeCCcccccc-CCCCeEEE--EHh
Confidence            4689999999                999999999999999999         9999987542211 12233444  444


Q ss_pred             ChhH----HHhhhcCCCEEEEccccc
Q 044498           86 VMDN----CLRMTSGVDNMSNLAADM  107 (366)
Q Consensus        86 ~~~~----l~~~~~~~d~vi~~a~~~  107 (366)
                      ..++    +.+.+.++|++||+||..
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCccc
Confidence            5443    333456899999999965

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.28  E-value=6.1e-06  Score=65.52  Aligned_cols=74  Identities=7%  Similarity=-0.140  Sum_probs=61.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      .+++|+|+|+ |.+|+.+++.|.+.|++         |+++++++.........++.++.+|.++++.+.++ +.++|.|
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~---------v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~v   75 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIP---------LVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWL   75 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCC---------EEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCC---------EEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEE
Confidence            4568999996 99999999999999999         99999987654444445778999999999988775 5789999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-+.+
T Consensus        76 i~~~~   80 (140)
T 3fwz_A           76 ILTIP   80 (140)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            97766

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.24  E-value=4.3e-06  Score=71.73  Aligned_cols=72  Identities=13%  Similarity=-0.005  Sum_probs=59.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhh-hcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRM-TSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi  101 (366)
                      |+|+|+|+ |.+|+++++.|.+.|++         |+++++++...... ...++.++.+|.++.+.+.++ ++++|+||
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~---------v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   70 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYG---------VVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVV   70 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCC---------EEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCe---------EEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence            58999996 99999999999999999         99999887644332 223568999999999988886 67899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+.+
T Consensus        71 ~~~~   74 (218)
T 3l4b_C           71 ILTP   74 (218)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            6655

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.19  E-value=1.3e-05  Score=73.73  Aligned_cols=77  Identities=8%  Similarity=-0.114  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHH-HcCCCCCCCCCccEEEEEeCCCccccc------------------cccccceEEEc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLK-SERHYSTSIPNALYIIASDWNKNEHMM------------------EDMFCHEFHLV   82 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~-~~g~~~~~~~~~~~V~~~~r~~~~~~~------------------~~~~~v~~~~~   82 (366)
                      .++++|||||+..||.+.+..|. ..|..         |+++.+.......                  ........+.+
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~---------vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~  119 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAA---------TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDG  119 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCE---------EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEES
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCC---------EEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeC
Confidence            56899999999999999999887 67888         8888876543221                  11234578999


Q ss_pred             cCCChhHHHhhhc-------CCCEEEEccccc
Q 044498           83 DLRVMDNCLRMTS-------GVDNMSNLAADM  107 (366)
Q Consensus        83 D~~~~~~l~~~~~-------~~d~vi~~a~~~  107 (366)
                      |+.+.+.+.++++       ++|++||++|..
T Consensus       120 Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          120 DAFSDEIKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             CTTSHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence            9999988777653       699999999964

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.08  E-value=1.9e-05  Score=72.38  Aligned_cols=96  Identities=18%  Similarity=0.051  Sum_probs=59.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe-CCCc-cccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD-WNKN-EHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~-r~~~-~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++|||+|.||||++|+.+++.|.++++...      .+..+. +... +........+.+.  +. +++    .++++|+
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~------elv~i~s~~~~g~~~~~~g~~i~~~--~~-~~~----~~~~~Dv   71 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDFPLH------RLHLLASAESAGQRMGFAESSLRVG--DV-DSF----DFSSVGL   71 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCS------CEEEEECTTTTTCEEEETTEEEECE--EG-GGC----CGGGCSE
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCcE------EEEEEecCCCCCCccccCCcceEEe--cC-CHH----HhcCCCE
Confidence            457899999999999999999997766411      155554 3221 1111111111111  22 111    2568999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      ||.+.+                   ...+..++..+.+.|+   ++|-+|+.+
T Consensus        72 V~~a~g-------------------~~~s~~~a~~~~~aG~---kvId~Sa~~  102 (340)
T 2hjs_A           72 AFFAAA-------------------AEVSRAHAERARAAGC---SVIDLSGAL  102 (340)
T ss_dssp             EEECSC-------------------HHHHHHHHHHHHHTTC---EEEETTCTT
T ss_pred             EEEcCC-------------------cHHHHHHHHHHHHCCC---EEEEeCCCC
Confidence            999888                   2345677778888887   577777753

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.08  E-value=9.7e-06  Score=69.36  Aligned_cols=72  Identities=13%  Similarity=-0.091  Sum_probs=54.3

Q ss_pred             CCCeEEEEcC----------------CCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC
Q 044498           22 GKLRISSIGV----------------GGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~   85 (366)
                      .+++||||||                ||.+|.++++.|.++|++         |+++++......   ..++  -..|+.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~---------V~l~~~~~~l~~---~~g~--~~~dv~   72 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN---------VTLVSGPVSLPT---PPFV--KRVDVM   72 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE---------EEEEECSCCCCC---CTTE--EEEECC
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE---------EEEEECCccccc---CCCC--eEEccC
Confidence            5789999999                799999999999999999         999887642111   1122  346777


Q ss_pred             ChhHHHhh----hcCCCEEEEccccc
Q 044498           86 VMDNCLRM----TSGVDNMSNLAADM  107 (366)
Q Consensus        86 ~~~~l~~~----~~~~d~vi~~a~~~  107 (366)
                      +.+++.+.    +.++|++||+||..
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCccc
Confidence            76654443    35799999999965

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.03  E-value=4.3e-06  Score=76.49  Aligned_cols=106  Identities=11%  Similarity=0.034  Sum_probs=71.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccc----cccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++||.|+|++|++|+.++..|+.+|  .+         |.+++....+...    ....  .+-..++.-..+..+.++
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~e---------vvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~al~   75 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPN---------LCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEALT   75 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSC---------EEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCE---------EEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHHhC
Confidence            56899999999999999999999988  47         9999976432111    1110  000011111123556678


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ++|+||.+||...   ....+..+.+..|+...+.+.+.+.+++.+
T Consensus        76 dADvVvitaG~p~---kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~  118 (343)
T 3fi9_A           76 DAKYIVSSGGAPR---KEGMTREDLLKGNAEIAAQLGKDIKSYCPD  118 (343)
T ss_dssp             TEEEEEECCC----------CHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999999999532   223355677899999999999999998765

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.03  E-value=3.1e-06  Score=71.36  Aligned_cols=74  Identities=20%  Similarity=0.092  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH---hhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL---RMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~---~~~--~~   96 (366)
                      .+++|||+||+|.||..+++.+...|.+         |++++++..........+... ..|..+.+...   +..  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---------V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~  107 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGAR---------IYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYG  107 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCE---------EEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999         999998754332222223332 24665544333   322  25


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|++|+++|
T Consensus       108 ~D~vi~~~g  116 (198)
T 1pqw_A          108 VDVVLNSLA  116 (198)
T ss_dssp             EEEEEECCC
T ss_pred             CeEEEECCc
Confidence            999999987

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.90  E-value=2.9e-05  Score=71.23  Aligned_cols=97  Identities=9%  Similarity=-0.019  Sum_probs=58.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccc--cccceE-EEccCCChhHHHhhhcC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMED--MFCHEF-HLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~--~~~v~~-~~~D~~~~~~l~~~~~~   96 (366)
                      ++|+||.|.||||++|+.+++.|.+... +         ++++.+.........  ...+.- ....+.+.+   . +.+
T Consensus         2 ~~~~kV~IiGAtG~iG~~llr~L~~~p~~e---------lv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~   68 (345)
T 2ozp_A            2 TGKKTLSIVGASGYAGGEFLRLALSHPYLE---------VKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEP   68 (345)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHTCTTEE---------EEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHcCCCcE---------EEEEECchhhCchhHHhCchhcCcccccccchh---H-hcC
Confidence            3568999999999999999999987643 5         777665332211110  000000 111222322   2 478


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      +|+||.+++.                   ..+..+...+.+.|+   ++|-.|+..
T Consensus        69 vDvV~~a~g~-------------------~~s~~~a~~~~~aG~---~VId~Sa~~  102 (345)
T 2ozp_A           69 ADILVLALPH-------------------GVFAREFDRYSALAP---VLVDLSADF  102 (345)
T ss_dssp             CSEEEECCCT-------------------THHHHTHHHHHTTCS---EEEECSSTT
T ss_pred             CCEEEEcCCc-------------------HHHHHHHHHHHHCCC---EEEEcCccc
Confidence            9999999883                   224556666667776   688888853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.84  E-value=6.1e-05  Score=70.84  Aligned_cols=74  Identities=16%  Similarity=0.101  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      ..++|+|+|. |.+|+.+++.|.+.|+.         |+++++++.........++.++.+|.++++.+.++ +.++++|
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~---------vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~v   72 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVK---------MVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVL   72 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCC---------EEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCC---------EEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEE
Confidence            3468999996 99999999999999999         99999987754444455778999999999999887 6789999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-+..
T Consensus        73 iv~~~   77 (413)
T 3l9w_A           73 INAID   77 (413)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            96665

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.82  E-value=2.7e-05  Score=70.72  Aligned_cols=109  Identities=17%  Similarity=0.090  Sum_probs=75.3

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----ccc------ccceEEEccCCCh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDM------FCHEFHLVDLRVM   87 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~------~~v~~~~~D~~~~   87 (366)
                      +..++||.|+|+ |.+|+.++..|...|.  +         |.++++...+...    ...      ..+.+...|   .
T Consensus         2 ~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~---------l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~   68 (326)
T 3pqe_A            2 NKHVNKVALIGA-GFVGSSYAFALINQGITDE---------LVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y   68 (326)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCce---------EEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H
Confidence            345689999996 9999999999999886  7         9999986542111    100      122333222   2


Q ss_pred             hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           88 DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        88 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                          +.++++|+||.+||...   ....+..+.+..|+.....+.+.+.+++.+ ..++.+|
T Consensus        69 ----~a~~~aDvVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~-a~vlvvt  122 (326)
T 3pqe_A           69 ----EDCKDADIVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMASGFD-GIFLVAT  122 (326)
T ss_dssp             ----GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTTCC-SEEEECS
T ss_pred             ----HHhCCCCEEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhcCC-eEEEEcC
Confidence                35789999999998532   223345667899999999999999998755 2455444

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.78  E-value=1.2e-05  Score=73.91  Aligned_cols=93  Identities=12%  Similarity=0.019  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-----C-CCCCCCCccEEEEEeCCC-c-ccccccc------ccceEEEccCCCh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-----H-YSTSIPNALYIIASDWNK-N-EHMMEDM------FCHEFHLVDLRVM   87 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-----~-~~~~~~~~~~V~~~~r~~-~-~~~~~~~------~~v~~~~~D~~~~   87 (366)
                      +||||+|+||||++|+.|++.|++.+     + +         |+.+.+.. . +......      ..+.+.  ++ +.
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~e---------i~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~~   75 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLR---------IGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-EA   75 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEE---------EEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-CH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEE---------EEEEECCCcCCCchhhhcccccccceeeec--cC-CH
Confidence            46799999999999999999999876     3 5         66665322 1 2111100      111221  22 22


Q ss_pred             hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498           88 DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        88 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      +    .+.++|+||.+.+...                   +..++..+ +.|+   ++|-+|+..-
T Consensus        76 ~----~~~~~DvVf~alg~~~-------------------s~~~~~~~-~~G~---~vIDlSa~~R  114 (352)
T 2nqt_A           76 A----VLGGHDAVFLALPHGH-------------------SAVLAQQL-SPET---LIIDCGADFR  114 (352)
T ss_dssp             H----HHTTCSEEEECCTTSC-------------------CHHHHHHS-CTTS---EEEECSSTTT
T ss_pred             H----HhcCCCEEEECCCCcc-------------------hHHHHHHH-hCCC---EEEEECCCcc
Confidence            2    2458999999988421                   34566667 6665   7898888643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.78  E-value=3.9e-05  Score=68.57  Aligned_cols=71  Identities=14%  Similarity=0.108  Sum_probs=50.1

Q ss_pred             CCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCC
Q 044498           18 HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      .|..+||+|.|+|+||.+|+.+++.|.+.|++         |++++|++.........++.     ..+   ..+.++++
T Consensus         6 ~~~~mmm~I~iIG~tG~mG~~la~~l~~~g~~---------V~~~~r~~~~~~~~~~~g~~-----~~~---~~~~~~~a   68 (286)
T 3c24_A            6 KNDVGPKTVAILGAGGKMGARITRKIHDSAHH---------LAAIEIAPEGRDRLQGMGIP-----LTD---GDGWIDEA   68 (286)
T ss_dssp             CCSCCCCEEEEETTTSHHHHHHHHHHHHSSSE---------EEEECCSHHHHHHHHHTTCC-----CCC---SSGGGGTC
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHhCCCE---------EEEEECCHHHHHHHHhcCCC-----cCC---HHHHhcCC
Confidence            34445689999999999999999999999999         99999875432222112222     122   23456789


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||-+..
T Consensus        69 DvVi~av~   76 (286)
T 3c24_A           69 DVVVLALP   76 (286)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEcCC
Confidence            99997766

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.74  E-value=2.6e-05  Score=69.15  Aligned_cols=90  Identities=12%  Similarity=0.152  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEE-EEeCCCcccccc---ccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYII-ASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~-~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ++|||+|+|++|.+|+.+++.+.+ .|++         +. ++++........   ...++.  ..++...+++..++.+
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~e---------lva~~d~~~~~~~g~d~~~~~g~~--~~~v~~~~dl~~~l~~   72 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQ---------LGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDD   72 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEE---------CCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTS
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCE---------EEEEEecCchhhhhhhHHHHcCCC--cCCceecCCHHHHhcC
Confidence            457999999999999999999885 4677         66 445543221000   000000  0111112223345568


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +|+||+++.                   ...+..++++|.++|+.
T Consensus        73 ~DvVIDft~-------------------p~~~~~~~~~a~~~G~~   98 (273)
T 1dih_A           73 FDVFIDFTR-------------------PEGTLNHLAFCRQHGKG   98 (273)
T ss_dssp             CSEEEECSC-------------------HHHHHHHHHHHHHTTCE
T ss_pred             CCEEEEcCC-------------------hHHHHHHHHHHHhCCCC
Confidence            999998886                   23456677777777763

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.73  E-value=5.6e-05  Score=66.79  Aligned_cols=89  Identities=12%  Similarity=0.201  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEE-EeCCCcccccc---ccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIA-SDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~-~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      .|+||.|+|++|.+|+.+++.+.+. +++         +.+ +++........   ...+...   ++.-.+++.+++.+
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~e---------Lv~~~d~~~~~~~G~d~gel~g~~~---gv~v~~dl~~ll~~   73 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDAT---------LVGALDRTGSPQLGQDAGAFLGKQT---GVALTDDIERVCAE   73 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEE---------EEEEBCCTTCTTTTSBTTTTTTCCC---SCBCBCCHHHHHHH
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCE---------EEEEEEecCcccccccHHHHhCCCC---CceecCCHHHHhcC
Confidence            4689999999999999999999875 566         665 56653321100   0001111   22222345556668


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +|+||+++.                   ...+...++.|.+++++
T Consensus        74 ~DVVIDfT~-------------------p~a~~~~~~~al~~G~~   99 (272)
T 4f3y_A           74 ADYLIDFTL-------------------PEGTLVHLDAALRHDVK   99 (272)
T ss_dssp             CSEEEECSC-------------------HHHHHHHHHHHHHHTCE
T ss_pred             CCEEEEcCC-------------------HHHHHHHHHHHHHcCCC
Confidence            999999875                   34556778888888884

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.67  E-value=1.7e-05  Score=67.55  Aligned_cols=72  Identities=13%  Similarity=0.098  Sum_probs=48.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |+|+|+||+|++|+++++.|.+.|++         |++++|+......... .+..+...|+. ..++.++++++|+||+
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~   70 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHE---------IVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVL   70 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCE---------EEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEE
Confidence            58999999999999999999999999         9999987543221111 01000001222 2345556678999999


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        71 ~~~   73 (212)
T 1jay_A           71 TIP   73 (212)
T ss_dssp             CSC
T ss_pred             eCC
Confidence            877

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.65  E-value=2.5e-05  Score=71.87  Aligned_cols=74  Identities=12%  Similarity=0.129  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh----c-C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT----S-G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~----~-~   96 (366)
                      ..++|||+||+|.||..+++.+...|.+         |++++++..+.......+...+ .|+.+.+++.+.+    . +
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~---------V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~  238 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYR---------VLGIDGGEGKEELFRSIGGEVF-IDFTKEKDIVGAVLKATDGG  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECSTTHHHHHHHTTCCEE-EETTTCSCHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCc---------EEEEcCCHHHHHHHHHcCCceE-EecCccHhHHHHHHHHhCCC
Confidence            4578999999999999999999999999         9999987654332222333332 3666433333322    2 6


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||++++
T Consensus       239 ~D~vi~~~g  247 (347)
T 2hcy_A          239 AHGVINVSV  247 (347)
T ss_dssp             EEEEEECSS
T ss_pred             CCEEEECCC
Confidence            999999988

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.63  E-value=0.00019  Score=65.58  Aligned_cols=96  Identities=11%  Similarity=-0.006  Sum_probs=59.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC-Cc-cccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN-KN-EHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~-~~-~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      +|+||+|.||||++|+.+++.|.++++.      .+.++++... .. +........+.+.  ++. +    ..++++|+
T Consensus         2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p------~~elv~i~s~~~~G~~~~~~~~~i~~~--~~~-~----~~~~~vDv   68 (336)
T 2r00_A            2 QQFNVAIFGATGAVGETMLEVLQEREFP------VDELFLLASERSEGKTYRFNGKTVRVQ--NVE-E----FDWSQVHI   68 (336)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTCC------EEEEEEEECTTTTTCEEEETTEEEEEE--EGG-G----CCGGGCSE
T ss_pred             CccEEEEECCCCHHHHHHHHHHhcCCCC------CEEEEEEECCCCCCCceeecCceeEEe--cCC-h----HHhcCCCE
Confidence            4689999999999999999999887422      0116666522 11 1111111111221  211 1    13468999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      ||.|.+                   ...+......+.+.|+   ++|-.|+.+
T Consensus        69 Vf~a~g-------------------~~~s~~~a~~~~~~G~---~vId~s~~~   99 (336)
T 2r00_A           69 ALFSAG-------------------GELSAKWAPIAAEAGV---VVIDNTSHF   99 (336)
T ss_dssp             EEECSC-------------------HHHHHHHHHHHHHTTC---EEEECSSTT
T ss_pred             EEECCC-------------------chHHHHHHHHHHHcCC---EEEEcCCcc
Confidence            998888                   2345567777777887   588888763

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.59  E-value=3.1e-05  Score=70.79  Aligned_cols=74  Identities=8%  Similarity=0.100  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH----hhh-cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL----RMT-SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~----~~~-~~   96 (366)
                      .+++|||+||+|.||..+++.+...|.+         |++++++..+.......+.. ...|+.+.+++.    +.. .+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---------V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCK---------VVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCC
Confidence            5678999999999999999999999999         99999875433222222333 234666522222    222 26


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|++|+++|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999999998

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.58  E-value=0.00016  Score=62.44  Aligned_cols=72  Identities=8%  Similarity=-0.009  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~v  100 (366)
                      ..++|+|+|+ |.+|+.+++.|.+.|+          |+++++++....... .++.++.+|.++++.+.++ ++++|.|
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~----------v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~v   75 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV----------FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAV   75 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE----------EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe----------EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEE
Confidence            4568999997 9999999999987763          667777655432222 5678999999999998877 7899999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |.+.+
T Consensus        76 i~~~~   80 (234)
T 2aef_A           76 IVDLE   80 (234)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            97655

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.58  E-value=0.0005  Score=63.23  Aligned_cols=95  Identities=14%  Similarity=0.051  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc--cccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN--EHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~--~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++||.|+||||++|+.|++.|.+.++.      ...+..+.....  +.......  ....-++. .+    .++++|+|
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p------~~el~~~as~~saG~~~~~~~~--~~~~~~~~-~~----~~~~~Dvv   68 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLP------IDKIRYLASARSAGKSLKFKDQ--DITIEETT-ET----AFEGVDIA   68 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCC------EEEEEEEECTTTTTCEEEETTE--EEEEEECC-TT----TTTTCSEE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCC------cEEEEEEEccccCCCcceecCC--CceEeeCC-HH----HhcCCCEE
Confidence            579999999999999999988887653      011344432211  11111111  11111221 11    25789999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      |.|++                   -..+......+.+.|+   ++|=.|+..
T Consensus        69 f~a~~-------------------~~~s~~~a~~~~~~G~---~vIDlSa~~   98 (366)
T 3pwk_A           69 LFSAG-------------------SSTSAKYAPYAVKAGV---VVVDNTSYF   98 (366)
T ss_dssp             EECSC-------------------HHHHHHHHHHHHHTTC---EEEECSSTT
T ss_pred             EECCC-------------------hHhHHHHHHHHHHCCC---EEEEcCCcc
Confidence            99888                   3335566667777787   588888864

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.57  E-value=0.00012  Score=66.94  Aligned_cols=160  Identities=9%  Similarity=-0.001  Sum_probs=90.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc------cccccc----cceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH------MMEDMF----CHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~------~~~~~~----~v~~~~~D~~~~~~l~   91 (366)
                      +..||.|+||+|.||+.|+..|.....-  .-+....+..++..+...      ......    ....+..     ....
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~--~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~-----~~~~   95 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALL--GPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT-----ADPR   95 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTT--CTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE-----SCHH
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhcccc--CCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc-----CChH
Confidence            4469999999999999999877765320  000011177777654311      011110    0111111     1234


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc---ccCCCCCCCCCccccc
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC---IYPEFKQLDTDVKESE  168 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~---vyg~~~~~~~~~~e~~  168 (366)
                      ..++++|+||-+||..-   .......+.+..|....+.+.++..++..++.+++.+|-..   +|-.        .+..
T Consensus        96 ~a~~~advVvi~aG~pr---kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~--------~~~~  164 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPR---KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALIL--------LKSA  164 (345)
T ss_dssp             HHTTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH--------HHHT
T ss_pred             HHhCCCCEEEECCCCCC---CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHH--------HHHc
Confidence            56899999999999643   34456788899999999999999988653323455555311   0100        0000


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHcCCc
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDFEIE  199 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~  199 (366)
                      ...+.+...-+.+.+..-++-...++..+++
T Consensus       165 ~g~~~~r~i~~~t~LDs~R~~~~la~~~~v~  195 (345)
T 4h7p_A          165 QGKLNPRHVTAMTRLDHNRALSLLARKAGVP  195 (345)
T ss_dssp             TTCSCGGGEEECCHHHHHHHHHHHHHHHTSC
T ss_pred             cCCCCcceeeeccchhHHHHHHHHHHHHCcC
Confidence            0012334444556666666666666666654

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.56  E-value=0.00011  Score=66.30  Aligned_cols=107  Identities=16%  Similarity=0.072  Sum_probs=69.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----c------cccceEEEccCCChhHHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----D------MFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----~------~~~v~~~~~D~~~~~~l~   91 (366)
                      +|||.|+|| |.+|..++..|...|+ +         |..++.+.......    .      .....+...  .|   . 
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~---------v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-   65 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGD---------IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-   65 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCe---------EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-
Confidence            479999998 9999999999999997 7         99999875422110    0      001111110  22   2 


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +.++++|+||.+++...   ............|+.....+.+.+.+.+.+  .+|.+.|
T Consensus        66 ~a~~~aD~Vi~a~g~p~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~--a~vi~~t  119 (309)
T 1ur5_A           66 ADTANSDVIVVTSGAPR---KPGMSREDLIKVNADITRACISQAAPLSPN--AVIIMVN  119 (309)
T ss_dssp             GGGTTCSEEEECCCC-----------CHHHHHHHHHHHHHHHHHGGGCTT--CEEEECC
T ss_pred             HHHCCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCC--eEEEEcC
Confidence            34789999999998543   112234556788999999999999988755  4554444

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.56  E-value=2.7e-05  Score=71.06  Aligned_cols=74  Identities=9%  Similarity=-0.097  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~--~~   96 (366)
                      .+++|||+||+|.||..+++.+...|.+         |++++++..+.......+...+ .|..+.+.   +.+..  .+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---------V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~  209 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAK---------LIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKK  209 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCE---------EEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHcCCCEE-EECCCccHHHHHHHHhCCCC
Confidence            4678999999999999999999999999         9999987544322222333322 35555433   33332  25


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|++|+++|
T Consensus       210 ~D~vi~~~g  218 (327)
T 1qor_A          210 VRVVYDSVG  218 (327)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCc
Confidence            899999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.54  E-value=6.5e-05  Score=69.25  Aligned_cols=74  Identities=9%  Similarity=0.057  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhhc--C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMTS--G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~~--~   96 (366)
                      .+.+|||+||+|.||..+++.+...|.+         |+++++++.+.......+... ..|..+.+.   +.+...  +
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLK---------ILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCE---------EEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCC
Confidence            4678999999999999999999999999         999998765433222233332 245555433   333332  6


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||+++|
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            999999998

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.51  E-value=0.00028  Score=63.78  Aligned_cols=111  Identities=13%  Similarity=0.037  Sum_probs=75.7

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCC-cccccc-----cc------ccceEEEccCC
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNK-NEHMME-----DM------FCHEFHLVDLR   85 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~-~~~~~~-----~~------~~v~~~~~D~~   85 (366)
                      |+++++||.|+|+ |.+|..++..|...|+ +         |..+++.+ ......     ..      ....+...  .
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~---------v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~   71 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELAD---------VVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--S   71 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCE---------EEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--S
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCe---------EEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--C
Confidence            5456679999996 9999999999999998 8         99999873 111100     00      01111111  1


Q ss_pred             ChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           86 VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        86 ~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +.    +.++++|+||-++|...   ....+..+.+..|+...+.+.+.+.+++.+ ..++.+|
T Consensus        72 d~----~a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~vlvvs  127 (315)
T 3tl2_A           72 DY----ADTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKHSPN-AIIVVLT  127 (315)
T ss_dssp             CG----GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEECC
T ss_pred             CH----HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEECC
Confidence            22    35789999999998542   223456778899999999999999988754 2455544

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.50  E-value=6.8e-05  Score=69.62  Aligned_cols=74  Identities=14%  Similarity=0.038  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ..++|+|+|+ |.||+.+++.|...|++         |++++++..+...... .+.. +.+|..+.+.+.+.+.++|+|
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~---------V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvV  233 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQ---------VTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLL  233 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEE
Confidence            5689999999 99999999999999999         9999987654322111 2222 456777788888888899999


Q ss_pred             EEcccc
Q 044498          101 SNLAAD  106 (366)
Q Consensus       101 i~~a~~  106 (366)
                      |++++.
T Consensus       234 i~~~g~  239 (369)
T 2eez_A          234 IGAVLV  239 (369)
T ss_dssp             EECCC-
T ss_pred             EECCCC
Confidence            999984

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.50  E-value=8e-05  Score=68.66  Aligned_cols=97  Identities=13%  Similarity=0.121  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccccc--cccce-EEEccCCChhHHHhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMED--MFCHE-FHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~--~~~v~-~~~~D~~~~~~l~~~~~~~   97 (366)
                      +++||+|.||+|++|+.+++.|.+.. .+         ++++...........  ...+. .+..|+.-.+  .+.++++
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~e---------lvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~--~~~~~~v   83 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQ---------VTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK--DADFSTV   83 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEE---------EEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG--GCCGGGC
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcE---------EEEEeCchhcCCCHHHhCchhcCcccccceecc--hhHhcCC
Confidence            34689999999999999999998765 35         777754332211110  00000 0012332222  3455789


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      |+||.|++..                   .+......+ +.|+   ++|-.|+..
T Consensus        84 DvVf~atp~~-------------------~s~~~a~~~-~aG~---~VId~sa~~  115 (359)
T 1xyg_A           84 DAVFCCLPHG-------------------TTQEIIKEL-PTAL---KIVDLSADF  115 (359)
T ss_dssp             SEEEECCCTT-------------------THHHHHHTS-CTTC---EEEECSSTT
T ss_pred             CEEEEcCCch-------------------hHHHHHHHH-hCCC---EEEECCccc
Confidence            9999998732                   134455555 5565   688888753

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.47  E-value=0.0003  Score=64.16  Aligned_cols=110  Identities=13%  Similarity=-0.001  Sum_probs=70.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccc--c--ccc-cceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMM--E--DMF-CHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~--~--~~~-~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|||.|+|| |.+|..++..|...|+ +         |..+++++.....  .  ... ........+.-..++.+.++
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~---------V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~   77 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELAD---------VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT   77 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCE---------EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCe---------EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhC
Confidence            4479999998 9999999999999998 8         9999988643221  0  000 00000111111123444678


Q ss_pred             CCCEEEEcccccCCccc--cccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           96 GVDNMSNLAADMGGMGF--IQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ++|+||-+++....+..  +..........|+.....+.+.+.+...+
T Consensus        78 ~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~  125 (331)
T 1pzg_A           78 GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK  125 (331)
T ss_dssp             TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999974321111  00034556778899999999999888644

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.47  E-value=0.00049  Score=62.36  Aligned_cols=107  Identities=13%  Similarity=0.025  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccc----cccc-----ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHM----MEDM-----FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~----~~~~-----~~v~~~~~D~~~~~~l   90 (366)
                      .++||.|+|+ |.+|+.++..|+..|.  +         |.++++......    ....     ..+.+...|       
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~e---------l~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------   70 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQE---------IGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------   70 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCe---------EEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------
Confidence            4579999996 9999999999999886  6         899988643211    0000     122333222       


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      .+.++++|+||.+||...   ....+..+.+..|+.....+.+.+.+++.+ ..++.+|
T Consensus        71 ~~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~-a~ilvvt  125 (326)
T 3vku_A           71 YSDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFN-GIFLVAA  125 (326)
T ss_dssp             GGGGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTCC-SEEEECS
T ss_pred             HHHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEcc
Confidence            234789999999999532   223456677889999999999999988755 2455443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.44  E-value=0.00043  Score=62.43  Aligned_cols=111  Identities=12%  Similarity=0.012  Sum_probs=72.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-C--CCCCCCCCccEEEEEeCCCc-c--ccccccccce-EEEccCCChhHHHhhhcC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-R--HYSTSIPNALYIIASDWNKN-E--HMMEDMFCHE-FHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g--~~~~~~~~~~~V~~~~r~~~-~--~~~~~~~~v~-~~~~D~~~~~~l~~~~~~   96 (366)
                      |||.|+||+|.+|+.++..|..+ +  .+         +..++..+. .  .......... -+.+-..  ......+++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~e---------l~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~--~~~~~~~~~   69 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSE---------LSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG--EDATPALEG   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEE---------EEEECSSTTHHHHHHHHHTSCSSEEEEEECS--SCCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCce---------EEEEecCCCchhHHHHhhCCCCCceEEEecC--CCcHHHhCC
Confidence            68999999999999999988875 5  46         888887651 1  1111111000 1111000  112345789


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +|+||.+||...   ....+..+.+..|+.....+.+++.+++.+ ..++.+|
T Consensus        70 aDivii~ag~~r---kpG~~R~dll~~N~~I~~~i~~~i~~~~p~-a~vlvvt  118 (312)
T 3hhp_A           70 ADVVLISAGVAR---KPGMDRSDLFNVNAGIVKNLVQQVAKTCPK-ACIGIIT  118 (312)
T ss_dssp             CSEEEECCSCSC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-SEEEECS
T ss_pred             CCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-cEEEEec
Confidence            999999998532   233467788999999999999999988754 2455444

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.43  E-value=0.00091  Score=61.71  Aligned_cols=90  Identities=11%  Similarity=0.069  Sum_probs=52.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |+||.|.||||++|+.|++.|++ .++..      +.+..+...........-.+......+..+++.    ++++|+||
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~------v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~----~~~~DvVf   70 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDA------IRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA----LKALDIIV   70 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGG------SEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH----HHTCSEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCe------EEEEEEEeCCCCCCccccCCCceEEEecCChHH----hcCCCEEE
Confidence            57999999999999999995555 44320      114444433211111000011222233334433    36899999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      .|.+                   ...+......+.+.|.+
T Consensus        71 ~a~g-------------------~~~s~~~a~~~~~~G~k   91 (367)
T 1t4b_A           71 TCQG-------------------GDYTNEIYPKLRESGWQ   91 (367)
T ss_dssp             ECSC-------------------HHHHHHHHHHHHHTTCC
T ss_pred             ECCC-------------------chhHHHHHHHHHHCCCC
Confidence            9988                   34556677777788875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.42  E-value=7.4e-05  Score=69.00  Aligned_cols=72  Identities=8%  Similarity=-0.006  Sum_probs=50.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhH---HHhhhc-CC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDN---CLRMTS-GV   97 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~---l~~~~~-~~   97 (366)
                      .+|||+||+|.||..+++.+...|. +         |++++++..+...... .+... ..|..+.+.   +.+... ++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~---------Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~  231 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSR---------VVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGV  231 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSE---------EEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCe---------EEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCC
Confidence            7899999999999999999999998 8         9999987543222211 33332 245555332   322222 69


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |++|+++|
T Consensus       232 d~vi~~~G  239 (357)
T 2zb4_A          232 DVYFDNVG  239 (357)
T ss_dssp             EEEEESCC
T ss_pred             CEEEECCC
Confidence            99999998

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.41  E-value=0.00034  Score=64.31  Aligned_cols=96  Identities=13%  Similarity=0.160  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEe--CCCc-ccccc-cc---------ccceEEEccCCC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASD--WNKN-EHMME-DM---------FCHEFHLVDLRV   86 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~--r~~~-~~~~~-~~---------~~v~~~~~D~~~   86 (366)
                      ++|+||.|.||||++|+.+++.|.+.. .+         |.++.  +... ..... ..         .+......++ +
T Consensus         2 ~~~~kV~IiGAtG~iG~~llr~L~~~p~~e---------lvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d   71 (350)
T 2ep5_A            2 ADKIKVSLLGSTGMVGQKMVKMLAKHPYLE---------LVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-N   71 (350)
T ss_dssp             CCCEEEEEESCSSHHHHHHHHHHTTCSSEE---------EEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-S
T ss_pred             CCCcEEEEECcCCHHHHHHHHHHHhCCCcE---------EEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-C
Confidence            356899999999999999999887653 35         77764  2111 11100 00         0011111222 2


Q ss_pred             hhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           87 MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        87 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      ++.    ++++|+||.|.+                   ...+..+...+.+.|+   ++|-.|+..
T Consensus        72 ~~~----~~~vDvVf~atp-------------------~~~s~~~a~~~~~aG~---~VId~s~~~  111 (350)
T 2ep5_A           72 YED----HKDVDVVLSALP-------------------NELAESIELELVKNGK---IVVSNASPF  111 (350)
T ss_dssp             GGG----GTTCSEEEECCC-------------------HHHHHHHHHHHHHTTC---EEEECSSTT
T ss_pred             HHH----hcCCCEEEECCC-------------------hHHHHHHHHHHHHCCC---EEEECCccc
Confidence            222    368999998877                   3345667778888887   588777753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.41  E-value=7.1e-05  Score=69.05  Aligned_cols=74  Identities=8%  Similarity=-0.011  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhhc--C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMTS--G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~~--~   96 (366)
                      .+.+|||+||+|.||..+++.+...|.+         |++++++..+.......+... ..|..+.+.   +.+...  +
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAI---------PLVTAGSQKKLQMAEKLGAAA-GFNYKKEDFSEATLKFTKGAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHcCCcE-EEecCChHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999         999998765433222233332 245554433   333332  6


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|++|+++|
T Consensus       232 ~d~vi~~~G  240 (354)
T 2j8z_A          232 VNLILDCIG  240 (354)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.41  E-value=7.7e-05  Score=68.22  Aligned_cols=74  Identities=11%  Similarity=0.089  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHH---hhh-cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCL---RMT-SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~---~~~-~~   96 (366)
                      .+.+|||+||+|-||..+++.+...|.+         |+++++++.+.... ...+...+ .|..+.+...   +.. .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~  218 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCR---------VVGIAGGAEKCRFLVEELGFDGA-IDYKNEDLAAGLKRECPKG  218 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCCSEE-EETTTSCHHHHHHHHCTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHcCCCEE-EECCCHHHHHHHHHhcCCC
Confidence            5678999999999999999999999999         99999876544333 33333322 3554433222   222 36


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||+++|
T Consensus       219 ~d~vi~~~g  227 (336)
T 4b7c_A          219 IDVFFDNVG  227 (336)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.40  E-value=0.00028  Score=63.94  Aligned_cols=105  Identities=11%  Similarity=0.025  Sum_probs=67.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----ccc-----ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDM-----FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~-----~~v~~~~~D~~~~~~l   90 (366)
                      +++||.|+|+ |++|..++..|...|.  +         |.+++....+...    ...     ..+.+. .  .+    
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~e---------v~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----   68 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANE---------LVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----   68 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSE---------EEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----
Confidence            4579999998 9999999999999886  6         9999987543211    000     011111 1  12    


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      .+.++++|+||.+++...   .......+.+..|+.....+.+.+.+++.. ..+|.
T Consensus        69 ~~a~~~aDvVii~~g~p~---k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv  121 (318)
T 1y6j_A           69 YSDVKDCDVIVVTAGANR---KPGETRLDLAKKNVMIAKEVTQNIMKYYNH-GVILV  121 (318)
T ss_dssp             GGGGTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCS-CEEEE
T ss_pred             HHHhCCCCEEEEcCCCCC---CCCcCHHHHHHhhHHHHHHHHHHHHHhCCC-cEEEE
Confidence            334789999999998532   112244567889999999999999987644 24444

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.38  E-value=0.00019  Score=65.29  Aligned_cols=95  Identities=16%  Similarity=0.172  Sum_probs=58.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCC---c--cccc-----cccc-cceEEEccCCChhH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNK---N--EHMM-----EDMF-CHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~---~--~~~~-----~~~~-~v~~~~~D~~~~~~   89 (366)
                      .|+||.|+||||++|+.|++.|.+. .++         +..+....   .  +...     .... ...+...  .+.  
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~e---------l~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~--   69 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMN---------ITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDI--   69 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEE---------EEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSG--
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCc---------EEEEEecCchhhcCCchHHhCccccCccceeEecc--CCH--
Confidence            3579999999999999999988874 456         66664332   1  1111     0000 1112111  012  


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                       .++++++|+||.|.+                   -..+..+...+.+.|+   ++|=.|+..
T Consensus        70 -~~~~~~~Dvvf~a~p-------------------~~~s~~~~~~~~~~g~---~vIDlSa~f  109 (337)
T 3dr3_A           70 -SEFSPGVDVVFLATA-------------------HEVSHDLAPQFLEAGC---VVFDLSGAF  109 (337)
T ss_dssp             -GGTCTTCSEEEECSC-------------------HHHHHHHHHHHHHTTC---EEEECSSTT
T ss_pred             -HHHhcCCCEEEECCC-------------------hHHHHHHHHHHHHCCC---EEEEcCCcc
Confidence             223378999998877                   2334566666777787   588888853

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.38  E-value=6.2e-05  Score=69.11  Aligned_cols=74  Identities=12%  Similarity=0.084  Sum_probs=51.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCCh----hHHHhhh-c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVM----DNCLRMT-S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~----~~l~~~~-~   95 (366)
                      .+++|||+||+|.||..+++.+...|.+         |++++++..+..... ..+...+ .|+.+.    +.+.+.. .
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~---------V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCY---------VVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAALKRCFPN  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHHHHHHCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999         999998765432222 2333332 355543    2233322 3


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||+++|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            6999999998

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.35  E-value=0.00026  Score=60.40  Aligned_cols=66  Identities=11%  Similarity=0.038  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++|+|.|+| +|.+|+.+++.|.+.|++         |++++|+..........++...        .+.++++++|+||
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~---------V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi   88 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFK---------VVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIF   88 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCC---------EEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEE
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEE
Confidence            457899999 799999999999999999         9999987654322222233321        2445678899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      .+..
T Consensus        89 ~av~   92 (215)
T 2vns_A           89 VAVF   92 (215)
T ss_dssp             ECSC
T ss_pred             ECCC
Confidence            8776

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.33  E-value=0.00039  Score=62.63  Aligned_cols=74  Identities=12%  Similarity=0.031  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEE--------ccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHL--------VDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~--------~D~~~~~~l~~~   93 (366)
                      +||+|+|+|+ |.+|+.++..|.+.|++         |++++|++.........++....        .+..+.+++...
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~---------V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   71 (316)
T 2ew2_A            2 NAMKIAIAGA-GAMGSRLGIMLHQGGND---------VTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQ   71 (316)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTT
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhCCCc---------EEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhccc
Confidence            4579999995 99999999999999999         99999876432221111222211        122233333333


Q ss_pred             hcCCCEEEEccc
Q 044498           94 TSGVDNMSNLAA  105 (366)
Q Consensus        94 ~~~~d~vi~~a~  105 (366)
                      ++++|+||-+..
T Consensus        72 ~~~~d~vi~~v~   83 (316)
T 2ew2_A           72 NEQVDLIIALTK   83 (316)
T ss_dssp             SCCCSEEEECSC
T ss_pred             CCCCCEEEEEec
Confidence            458999997765

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.33  E-value=0.0012  Score=59.22  Aligned_cols=37  Identities=22%  Similarity=0.115  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ++++|.|+||.|.+|..++..|.+.|++         |++++|++.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~---------V~~~~~~~~   56 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYP---------ISILDREDW   56 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCC---------EEEECTTCG
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCe---------EEEEECCcc
Confidence            4568999999999999999999999999         999987654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.30  E-value=9.8e-05  Score=67.78  Aligned_cols=74  Identities=14%  Similarity=0.106  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~--~~   96 (366)
                      ..++|||+||+|.+|..+++.+...|.+         |+++++++.+.......+...+ .|..+.+   .+.+..  .+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~---------Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGAR---------VIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVRRLTGGKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHHHHTTTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHhCCCC
Confidence            4578999999999999999999999999         9999987654332222333332 4555543   333333  26


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||+++|
T Consensus       236 ~d~vi~~~g  244 (343)
T 2eih_A          236 ADKVVDHTG  244 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.30  E-value=0.0003  Score=62.94  Aligned_cols=106  Identities=13%  Similarity=-0.008  Sum_probs=73.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccc----cccc------ccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHM----MEDM------FCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~----~~~~------~~v~~~~~D~~~~~~l~   91 (366)
                      |||.|+|+ |.+|..++..|...|+  +         |..+++.+....    ...+      ....+...  +|    .
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~---------v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~   64 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDE---------IALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----Y   64 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSE---------EEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCe---------EEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----H
Confidence            68999998 9999999999999887  7         999998764321    0000      11122211  12    3


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ++++++|+||.++|...   ....+..+.+..|+.....+.+.+.+++.+ ..+|.+|
T Consensus        65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~iivvs  118 (294)
T 1oju_A           65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILVVT  118 (294)
T ss_dssp             GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEECS
T ss_pred             HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEEeC
Confidence            45789999999998542   223355677899999999999999998754 3455544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.29  E-value=0.0011  Score=57.78  Aligned_cols=101  Identities=10%  Similarity=0.008  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCc-------------------cccc------c--c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKN-------------------EHMM------E--D   73 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~-------------------~~~~------~--~   73 (366)
                      ..++|+|+|+ |-+|+++++.|...|. +         |+++++..-                   +...      .  .
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~---------i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np   99 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGN---------LTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP   99 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSE---------EEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCe---------EEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC
Confidence            3478999995 8999999999999996 5         888887651                   1100      0  0


Q ss_pred             cccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498           74 MFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        74 ~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      ...++.+..+++ .+.+.+.++++|+||.+..                  |...-..+.+++++.+++   +|+.+....
T Consensus       100 ~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d------------------~~~~~~~l~~~~~~~~~p---~i~~~~~g~  157 (249)
T 1jw9_B          100 HIAITPVNALLD-DAELAALIAEHDLVLDCTD------------------NVAVRNQLNAGCFAAKVP---LVSGAAIRM  157 (249)
T ss_dssp             TSEEEEECSCCC-HHHHHHHHHTSSEEEECCS------------------SHHHHHHHHHHHHHHTCC---EEEEEEEBT
T ss_pred             CcEEEEEeccCC-HhHHHHHHhCCCEEEEeCC------------------CHHHHHHHHHHHHHcCCC---EEEeeeccc
Confidence            112334444454 3456677889999998765                  233345577778888875   777665443


Q ss_pred             c
Q 044498          154 Y  154 (366)
Q Consensus       154 y  154 (366)
                      +
T Consensus       158 ~  158 (249)
T 1jw9_B          158 E  158 (249)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.29  E-value=0.00043  Score=62.77  Aligned_cols=108  Identities=12%  Similarity=0.034  Sum_probs=73.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccc----cccc------ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHM----MEDM------FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~----~~~~------~~v~~~~~D~~~~~~l   90 (366)
                      +++||.|+|+ |.+|..++..|...|+ +         |..+++.+....    ....      ....+...  .|.   
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~---------v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~---   70 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGD---------VVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY---   70 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCE---------EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG---
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCe---------EEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH---
Confidence            5679999998 9999999999999988 8         999998775421    0100      01122211  122   


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       +.++++|+||.++|...   .......+.+..|+.....+.+.+.+++.. ..+|.+|
T Consensus        71 -~a~~~aDiVIiaag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~iivvt  124 (324)
T 3gvi_A           71 -AAIEGADVVIVTAGVPR---KPGMSRDDLLGINLKVMEQVGAGIKKYAPE-AFVICIT  124 (324)
T ss_dssp             -GGGTTCSEEEECCSCCC---C-----CHHHHHHHHHHHHHHHHHHHHCTT-CEEEECC
T ss_pred             -HHHCCCCEEEEccCcCC---CCCCCHHHHHHhhHHHHHHHHHHHHHHCCC-eEEEecC
Confidence             45789999999998542   222345667889999999999999988744 2455544

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.27  E-value=0.00069  Score=60.05  Aligned_cols=91  Identities=11%  Similarity=0.209  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEE-eCCCcccccc---ccccceEEEccCCChhHHHhhhc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIAS-DWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~-~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .+|+||.|.|++|.+|+.+++.+.+. +.+         +.+. ++........   ...++.  ..++.-..++.+++.
T Consensus        19 ~~~irV~V~Ga~GrMGr~i~~~v~~~~~~e---------Lvg~vd~~~~~~~G~d~gel~G~~--~~gv~v~~dl~~ll~   87 (288)
T 3ijp_A           19 PGSMRLTVVGANGRMGRELITAIQRRKDVE---------LCAVLVRKGSSFVDKDASILIGSD--FLGVRITDDPESAFS   87 (288)
T ss_dssp             --CEEEEESSTTSHHHHHHHHHHHTCSSEE---------EEEEBCCTTCTTTTSBGGGGTTCS--CCSCBCBSCHHHHTT
T ss_pred             cCCeEEEEECCCCHHHHHHHHHHHhCCCCE---------EEEEEecCCccccccchHHhhccC--cCCceeeCCHHHHhc
Confidence            36689999999999999999998865 566         5544 5543221100   001111  112222234666677


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ++|+||.++.                   ...+...++.|.++++.
T Consensus        88 ~aDVvIDFT~-------------------p~a~~~~~~~~l~~Gv~  114 (288)
T 3ijp_A           88 NTEGILDFSQ-------------------PQASVLYANYAAQKSLI  114 (288)
T ss_dssp             SCSEEEECSC-------------------HHHHHHHHHHHHHHTCE
T ss_pred             CCCEEEEcCC-------------------HHHHHHHHHHHHHcCCC
Confidence            9999998875                   34556677888888885

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.27  E-value=0.00038  Score=66.41  Aligned_cols=74  Identities=15%  Similarity=0.123  Sum_probs=60.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhh-hcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRM-TSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~-~~~~d~   99 (366)
                      ..|||+|.|+ |-+|++|++.|.++||+         |+++++++...... ...++..+.||-++++.|.++ ++++|.
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~---------v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~   71 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENND---------ITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADM   71 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEE---------EEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCC---------EEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCE
Confidence            3579999996 99999999999999999         99999887654332 234678999999999999887 578999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      +|-+.+
T Consensus        72 ~ia~t~   77 (461)
T 4g65_A           72 LVAVTN   77 (461)
T ss_dssp             EEECCS
T ss_pred             EEEEcC
Confidence            985444

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.25  E-value=0.0011  Score=60.94  Aligned_cols=93  Identities=12%  Similarity=0.060  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCc---ccccc-cc-----------ccceEEEccCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKN---EHMME-DM-----------FCHEFHLVDLRV   86 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~---~~~~~-~~-----------~~v~~~~~D~~~   86 (366)
                      |+||.|.||||++|+.+++.|.+.. .+         |.++.++..   +.... ..           ..+.+...   +
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~e---------v~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~   75 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFE---------LTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---D   75 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEE---------EEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---C
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCE---------EEEEEcccccccccHHHhcccccccccccCceeeEEEeC---C
Confidence            4799999999999999999888654 45         777754221   11100 00           00111111   2


Q ss_pred             hhHHHhhhc-CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498           87 MDNCLRMTS-GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus        87 ~~~l~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      ++   +.++ ++|+||.+.+                   ......+...+.+.|+   ++|-.|+..
T Consensus        76 ~~---~~~~~~~DvV~~atp-------------------~~~~~~~a~~~~~aG~---~VId~s~~~  117 (354)
T 1ys4_A           76 PK---HEEFEDVDIVFSALP-------------------SDLAKKFEPEFAKEGK---LIFSNASAY  117 (354)
T ss_dssp             TT---SGGGTTCCEEEECCC-------------------HHHHHHHHHHHHHTTC---EEEECCSTT
T ss_pred             HH---HHhcCCCCEEEECCC-------------------chHHHHHHHHHHHCCC---EEEECCchh
Confidence            22   2335 8999998887                   2334556666677776   578777653

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.23  E-value=0.00024  Score=64.74  Aligned_cols=93  Identities=15%  Similarity=0.010  Sum_probs=56.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEE-eCC-CccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIAS-DWN-KNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~-~r~-~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |||.|.||+|++|+.+++.|.++++....      +..+ ++. ...........+.+...|   ++   . + ++|+||
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~------l~~~~s~~~~g~~l~~~g~~i~v~~~~---~~---~-~-~~DvV~   66 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSE------LRLYASPRSAGVRLAFRGEEIPVEPLP---EG---P-L-PVDLVL   66 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSC------CEEEECGGGSSCEEEETTEEEEEEECC---SS---C-C-CCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEE------EEEeeccccCCCEEEEcCceEEEEeCC---hh---h-c-CCCEEE
Confidence            58999999999999999999987776211      2222 211 111111111112222222   22   2 4 899999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      .|.+                   ...+........+.|+   ++|-.|+.+
T Consensus        67 ~a~g-------------------~~~s~~~a~~~~~~G~---~vId~s~~~   95 (331)
T 2yv3_A           67 ASAG-------------------GGISRAKALVWAEGGA---LVVDNSSAW   95 (331)
T ss_dssp             ECSH-------------------HHHHHHHHHHHHHTTC---EEEECSSSS
T ss_pred             ECCC-------------------ccchHHHHHHHHHCCC---EEEECCCcc
Confidence            9988                   3344556666667776   588888863

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.23  E-value=0.0002  Score=65.34  Aligned_cols=74  Identities=9%  Similarity=0.025  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~--~~   96 (366)
                      .+.+|||+||+|.||..+++.+...|.+         |++++++..+.......+...+ .|..+.+.   +.+..  .+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---------Vi~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~i~~~~~~~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGAT---------VIGTVSTEEKAETARKLGCHHT-INYSTQDFAEVVREITGGKG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCCEE-EECCCHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999         9999987643322222233322 35555432   33332  26


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|++|+++|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1wly_A          215 VDVVYDSIG  223 (333)
T ss_dssp             EEEEEECSC
T ss_pred             CeEEEECCc
Confidence            999999998

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.22  E-value=0.0015  Score=58.23  Aligned_cols=106  Identities=13%  Similarity=0.007  Sum_probs=72.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccc----cccc----c--cceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHM----MEDM----F--CHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~----~~~~----~--~v~~~~~D~~~~~~l~   91 (366)
                      |||.|+|| |.||+.++..|..++.  +         +..++.......    ...+    .  ...+...  .|++   
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~e---------l~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~---   65 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDE---------IALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS---   65 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSE---------EEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCE---------EEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH---
Confidence            68999995 9999999999988763  5         888887653211    0110    0  1112211  1232   


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       .++++|+||-.||...   ....+..+.+..|....+.+.+++.+++.+ ..++.+|
T Consensus        66 -~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~-aivlvvs  118 (294)
T 2x0j_A           66 -LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILVVT  118 (294)
T ss_dssp             -GGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEECS
T ss_pred             -HhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEec
Confidence             4689999999999643   344577888999999999999999998866 1344444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.22  E-value=0.0034  Score=56.76  Aligned_cols=108  Identities=10%  Similarity=-0.029  Sum_probs=74.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccc----cccc------ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHM----MEDM------FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~----~~~~------~~v~~~~~D~~~~~~l   90 (366)
                      +++||.|+|+ |.+|..++..|...|. +         |..+++.+....    ....      ....+...  .+.   
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~---------v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~---   68 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGD---------VVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY---   68 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCE---------EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCce---------EEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH---
Confidence            4679999995 9999999999998887 7         999998765421    0110      11222211  122   


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       +.++++|+||.+++...   .......+.+..|+.....+.+.+.+++.+ ..+|.+|
T Consensus        69 -~a~~~aDvVIi~ag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~vivvt  122 (321)
T 3p7m_A           69 -KDLENSDVVIVTAGVPR---KPGMSRDDLLGINIKVMQTVGEGIKHNCPN-AFVICIT  122 (321)
T ss_dssp             -GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEECC
T ss_pred             -HHHCCCCEEEEcCCcCC---CCCCCHHHHHHHhHHHHHHHHHHHHHHCCC-cEEEEec
Confidence             35789999999998542   222345667889999999999999998744 2455543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.20  E-value=0.00023  Score=65.83  Aligned_cols=74  Identities=8%  Similarity=0.015  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh-cCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT-SGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~-~~~   97 (366)
                      ...+|||+||+|.||..+++.+...|.+         |++++++..+.......+...+ .|..+.+   .+.+.. .++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~---------Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCH---------VIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLKQEYPEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHCTTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCE---------EEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHHHhcCCCC
Confidence            4578999999999999999999889999         9999987554332222333432 2333322   222222 368


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||+++|
T Consensus       233 D~vid~~g  240 (362)
T 2c0c_A          233 DVVYESVG  240 (362)
T ss_dssp             EEEEECSC
T ss_pred             CEEEECCC
Confidence            99999988

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.20  E-value=0.0013  Score=58.87  Aligned_cols=68  Identities=13%  Similarity=0.094  Sum_probs=48.1

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      |.++|+|.|+| .|.+|..+++.|.+.|++         |++++|++.........++..       ..++.++++ +|+
T Consensus        12 M~~~~~I~vIG-~G~mG~~~A~~l~~~G~~---------V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~-aDv   73 (296)
T 3qha_A           12 TTEQLKLGYIG-LGNMGAPMATRMTEWPGG---------VTVYDIRIEAMTPLAEAGATL-------ADSVADVAA-ADL   73 (296)
T ss_dssp             ---CCCEEEEC-CSTTHHHHHHHHTTSTTC---------EEEECSSTTTSHHHHHTTCEE-------CSSHHHHTT-SSE
T ss_pred             ccCCCeEEEEC-cCHHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHCCCEE-------cCCHHHHHh-CCE
Confidence            33457899999 699999999999999999         999999876544332222221       123455566 999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||-+..
T Consensus        74 vi~~vp   79 (296)
T 3qha_A           74 IHITVL   79 (296)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            997765

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.19  E-value=0.00095  Score=63.05  Aligned_cols=89  Identities=10%  Similarity=0.092  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-C---CCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh---hHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-H---YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM---DNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-~---~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~---~~l~~~~~   95 (366)
                      ++||+|+| .|-||+.+++.|.+.. .   +         |++.+............++.+...+++..   +.+.++++
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~---------I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~   82 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQ---------VTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLE   82 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGG---------EEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeE---------EEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhc
Confidence            46899999 6999999999998864 3   5         88887655443222233556777666544   33556777


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV  140 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~  140 (366)
                      +.|+|||++-..                   ....++++|.+.|+
T Consensus        83 ~~DvVIN~s~~~-------------------~~l~Im~acleaGv  108 (480)
T 2ph5_A           83 ENDFLIDVSIGI-------------------SSLALIILCNQKGA  108 (480)
T ss_dssp             TTCEEEECCSSS-------------------CHHHHHHHHHHHTC
T ss_pred             CCCEEEECCccc-------------------cCHHHHHHHHHcCC
Confidence            779999866532                   23569999999986

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.18  E-value=0.00071  Score=62.12  Aligned_cols=72  Identities=7%  Similarity=-0.075  Sum_probs=51.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh--cCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT--SGVD   98 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~--~~~d   98 (366)
                      .+|+|+||+|-||...++.+...|.+         |++++++..+.......+...+ .|..+.+   .+.+..  .++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~---------Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFR---------PIVTVRRDEQIALLKDIGAAHV-LNEKAPDFEATLREVMKAEQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCE---------EEEEESCGGGHHHHHHHTCSEE-EETTSTTHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCCEE-EECCcHHHHHHHHHHhcCCCCc
Confidence            68999999999999999988889999         9999987665433333343332 2444332   233333  3799


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||+++|
T Consensus       236 ~vid~~g  242 (349)
T 3pi7_A          236 IFLDAVT  242 (349)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.17  E-value=0.00016  Score=66.57  Aligned_cols=74  Identities=12%  Similarity=0.015  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhh-cCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMT-SGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~-~~~   97 (366)
                      ...+|||+||+|-||..+++.+...|.+         |+++++++.+.......+...+ .|..+.+.   +.+.. .++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~~~~~~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAE---------VYATAGSTGKCEACERLGAKRG-INYRSEDFAAVIKAETGQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHHSSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHhcCCCEE-EeCCchHHHHHHHHHhCCCc
Confidence            5678999999999999999999999999         9999987654433333333332 34444332   22222 369


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||+++|
T Consensus       237 Dvvid~~g  244 (353)
T 4dup_A          237 DIILDMIG  244 (353)
T ss_dssp             EEEEESCC
T ss_pred             eEEEECCC
Confidence            99999998

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.17  E-value=0.00032  Score=64.26  Aligned_cols=74  Identities=14%  Similarity=0.075  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhhc--C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMTS--G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~~--~   96 (366)
                      .+.+|||+||+|-||...++.+...|.+         |++++++..+.......+...+ .|..+.+   .+.+...  +
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~~~~~~~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFR---------LIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVMELTNGIG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE---------EEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHHHHhCCCC
Confidence            5679999999999999999988889999         9999987765433333344432 2444433   2333332  6


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||+++|
T Consensus       214 ~Dvvid~~g  222 (340)
T 3gms_A          214 ADAAIDSIG  222 (340)
T ss_dssp             EEEEEESSC
T ss_pred             CcEEEECCC
Confidence            999999998

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.16  E-value=0.00085  Score=60.79  Aligned_cols=110  Identities=16%  Similarity=0.088  Sum_probs=71.8

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----cc------ccceEEEccCCChh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----DM------FCHEFHLVDLRVMD   88 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----~~------~~v~~~~~D~~~~~   88 (366)
                      |.++|||.|+|+ |.+|..++..|...|+ +         |.++++++......    ..      ....+...  ++  
T Consensus         1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~---------V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d--   66 (317)
T 2ewd_A            1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLAD---------VVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD--   66 (317)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCE---------EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC--
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCce---------EEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC--
Confidence            345679999997 9999999999999998 8         99999876432211    00      00111110  12  


Q ss_pred             HHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       + +.++++|+||-+++....   ......+.+..|......+++.+.+.... ..+|.+|
T Consensus        67 -~-~a~~~aDiVi~avg~p~~---~g~~r~d~~~~~~~i~~~i~~~i~~~~~~-~iii~~s  121 (317)
T 2ewd_A           67 -Y-ADISGSDVVIITASIPGR---PKDDRSELLFGNARILDSVAEGVKKYCPN-AFVICIT  121 (317)
T ss_dssp             -G-GGGTTCSEEEECCCCSSC---CSSCGGGGHHHHHHHHHHHHHHHHHHCTT-SEEEECC
T ss_pred             -H-HHhCCCCEEEEeCCCCCC---CCCcHHHHHHhhHHHHHHHHHHHHHHCCC-cEEEEeC
Confidence             2 346899999999985432   22234455677888888888888877543 2344444

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.14  E-value=0.00049  Score=63.66  Aligned_cols=102  Identities=11%  Similarity=-0.001  Sum_probs=56.5

Q ss_pred             cccCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEe--CCCc-ccccc--cc----------cc
Q 044498           13 LERESHWPSGKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASD--WNKN-EHMME--DM----------FC   76 (366)
Q Consensus        13 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~--r~~~-~~~~~--~~----------~~   76 (366)
                      +.+-+.|  +|+||.|+||||++|+.|++.|.+.. .+         +..+.  +... +....  ..          ..
T Consensus        11 ~~~~~~M--~~~kVaIvGAtG~vG~ell~lL~~hp~~e---------l~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~   79 (381)
T 3hsk_A           11 VPRGSHM--SVKKAGVLGATGSVGQRFILLLSKHPEFE---------IHALGASSRSAGKKYKDAASWKQTETLPETEQD   79 (381)
T ss_dssp             ---------CCEEEEEETTTSHHHHHHHHHHTTCSSEE---------EEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHT
T ss_pred             ccccccC--CccEEEEECCCChHHHHHHHHHHcCCCce---------EEEeeccccccCCCHHHhccccccccccccccc
Confidence            3344454  56789999999999999999776643 24         65442  3221 11110  00          01


Q ss_pred             ceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc
Q 044498           77 HEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI  153 (366)
Q Consensus        77 v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v  153 (366)
                      ..+...|  ..+    .++++|+||.|.+                   -..+..+...+.+.|+   ++|=.|+..-
T Consensus        80 ~~v~~~~--~~~----~~~~~Dvvf~alp-------------------~~~s~~~~~~~~~~G~---~VIDlSa~fR  128 (381)
T 3hsk_A           80 IVVQECK--PEG----NFLECDVVFSGLD-------------------ADVAGDIEKSFVEAGL---AVVSNAKNYR  128 (381)
T ss_dssp             CBCEESS--SCT----TGGGCSEEEECCC-------------------HHHHHHHHHHHHHTTC---EEEECCSTTT
T ss_pred             ceEEeCc--hhh----hcccCCEEEECCC-------------------hhHHHHHHHHHHhCCC---EEEEcCCccc
Confidence            1122221  110    2468999998887                   2334566677777787   5888888643

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.14  E-value=0.001  Score=61.19  Aligned_cols=133  Identities=15%  Similarity=0.087  Sum_probs=72.0

Q ss_pred             ccccccccCCC-CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEE--EeCCCcc------ccccccccce
Q 044498            8 CTYDKLERESH-WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA--SDWNKNE------HMMEDMFCHE   78 (366)
Q Consensus         8 ~~~~~~~~~~~-~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~--~~r~~~~------~~~~~~~~v~   78 (366)
                      .+|+..+..+. -|.+++||.|+||+|.||++++..|...+.-  .-+..  |..  ++.....      .....+....
T Consensus        16 ~~~~~~~e~~~~~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~--~e~~~--l~L~d~d~~~~~~~~~G~amDL~h~~~p   91 (375)
T 7mdh_A           16 TTYDLKAEDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVF--GQDQP--IALKLLGSERSFQALEGVAMELEDSLYP   91 (375)
T ss_dssp             C------------CCCCEEEEEETTTSHHHHHHHHHHHHTTTT--CTTCC--EEEEEECCGGGHHHHHHHHHHHHTTTCT
T ss_pred             EEeechhhhhHhhCCCCCEEEEECCCChHHHHHHHHHHcCCcC--CCCce--eEEEecCccchhhhhHHHHHhHHhhhhh
Confidence            33555544332 2235678999999999999999999887531  00001  333  3332210      0111111000


Q ss_pred             E-EEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEec
Q 044498           79 F-HLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSS  150 (366)
Q Consensus        79 ~-~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS  150 (366)
                      + ....+..  .....++++|+||-.||..-   ....+..+.+..|+...+.+.+++.++ +.. ..+|.+|-
T Consensus        92 ~~~~v~i~~--~~y~~~~daDvVVitag~pr---kpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~-~ivlVvsN  159 (375)
T 7mdh_A           92 LLREVSIGI--DPYEVFEDVDWALLIGAKPR---GPGMERAALLDINGQIFADQGKALNAVASKN-VKVLVVGN  159 (375)
T ss_dssp             TEEEEEEES--CHHHHTTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTT-CEEEECSS
T ss_pred             hcCCcEEec--CCHHHhCCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEEecC
Confidence            0 0111111  12345789999999988532   334567788999999999999999885 433 25666554

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.14  E-value=0.0017  Score=56.23  Aligned_cols=72  Identities=13%  Similarity=0.152  Sum_probs=45.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-----cCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-----SGV   97 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-----~~~   97 (366)
                      |||+|+|++|.+|+.+++.+.+. +++         +.+................. +..|++.++.....+     .+.
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~e---------lva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~   70 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLT---------LSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGI   70 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCE---------EEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCE---------EEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCC
Confidence            58999999999999999998875 788         77554332211111111223 556777776554432     267


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      ++|+-..|
T Consensus        71 ~~VigTTG   78 (245)
T 1p9l_A           71 HAVVGTTG   78 (245)
T ss_dssp             EEEECCCC
T ss_pred             CEEEcCCC
Confidence            77775554

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.13  E-value=0.001  Score=60.36  Aligned_cols=107  Identities=15%  Similarity=0.056  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----cc------ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----DM------FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----~~------~~v~~~~~D~~~~~~l   90 (366)
                      .+|||.|+|| |.+|..++..|...|+ +         |.+++++.......    ..      ....+...  +|   .
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~---------v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~   67 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGD---------VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y   67 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCE---------EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCe---------EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H
Confidence            4679999998 9999999999999998 7         99999876432110    00      01111110  12   2


Q ss_pred             HhhhcCCCEEEEcccccCCccccccC-----cchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSN-----HSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~-----~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                       +.++++|+||-+++....+   ...     ..+....|+.....+.+.+.+...+ ..+|.+
T Consensus        68 -~al~~aD~Vi~a~g~p~k~---g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~  125 (322)
T 1t2d_A           68 -DDLAGADVVIVTAGFTKAP---GKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN-AFIIVV  125 (322)
T ss_dssp             -GGGTTCSEEEECCSCSSCT---TCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTT-SEEEEC
T ss_pred             -HHhCCCCEEEEeCCCCCCC---CCCcccccHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEe
Confidence             3578999999999753211   112     3456778888889999988887643 244444

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.12  E-value=0.00016  Score=65.86  Aligned_cols=74  Identities=12%  Similarity=-0.025  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhhc--C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMTS--G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~~--~   96 (366)
                      .+.+|||+||+|-||...++.+...|.+         |+++++++.+.......+...+ .|..+.+   .+.+...  +
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAK---------LIGTVSSPEKAAHAKALGAWET-IDYSHEDVAKRVLELTDGKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE---------EEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHhCCCC
Confidence            5678999999999999999999989999         9999987654333333333322 3444433   3333332  6


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||+++|
T Consensus       210 ~Dvvid~~g  218 (325)
T 3jyn_A          210 CPVVYDGVG  218 (325)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.12  E-value=0.00071  Score=62.20  Aligned_cols=27  Identities=19%  Similarity=0.336  Sum_probs=21.6

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSE   46 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~   46 (366)
                      |.+++||.|+||||++|+.|++.|.+.
T Consensus         4 M~~~~kVaIvGATGyvG~eLlrlL~~h   30 (359)
T 4dpl_A            4 MRRTLKAAILGATGLVGIEYVRMLSNH   30 (359)
T ss_dssp             --CCEEEEETTTTSTTHHHHHHHHTTC
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhC
Confidence            345679999999999999999966553

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.12  E-value=0.00071  Score=62.20  Aligned_cols=27  Identities=19%  Similarity=0.336  Sum_probs=21.6

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSE   46 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~   46 (366)
                      |.+++||.|+||||++|+.|++.|.+.
T Consensus         4 M~~~~kVaIvGATGyvG~eLlrlL~~h   30 (359)
T 4dpk_A            4 MRRTLKAAILGATGLVGIEYVRMLSNH   30 (359)
T ss_dssp             --CCEEEEETTTTSTTHHHHHHHHTTC
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhC
Confidence            345679999999999999999966553

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.12  E-value=0.0029  Score=56.99  Aligned_cols=106  Identities=15%  Similarity=0.046  Sum_probs=70.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----ccc------ccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDM------FCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~------~~v~~~~~D~~~~~~l~   91 (366)
                      |||.|+|+ |.+|+.++..|+..|.  +         |..+++.+.....    ...      ....+...  .+    .
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~e---------l~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~--~~----~   64 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKE---------VVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT--ND----Y   64 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSE---------EEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE--SS----S
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCchHHHHHHHHHHhccccccCCCcEEEEC--CC----H
Confidence            68999996 9999999999998886  7         9999987753210    010      01122211  12    2


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +.++++|+||.+||...   ....+..+.+..|+.....+.+.+.+++.+ ..++.+|
T Consensus        65 ~a~~~aDvVii~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~vivvt  118 (314)
T 3nep_X           65 GPTEDSDVCIITAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEGSPD-STIIVVA  118 (314)
T ss_dssp             GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTTCTT-CEEEECC
T ss_pred             HHhCCCCEEEECCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHhCCC-cEEEecC
Confidence            35789999999998542   223456778899999999999999988754 2455444

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.11  E-value=0.0019  Score=58.62  Aligned_cols=108  Identities=11%  Similarity=-0.003  Sum_probs=74.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----cccc-----cceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDMF-----CHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~~-----~v~~~~~D~~~~~~l   90 (366)
                      .++||.|+|+ |.+|+.++..|+..|.  +         |..++........    ..+.     ...++..  .|++  
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~e---------l~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~--   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADE---------LALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS--   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCce---------EEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH--
Confidence            5689999997 9999999999999886  6         8999876432111    1100     0112211  1232  


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                        .++++|+||.+||...   ....+..+.+..|+.....+.+.+.+++.. ..++.+|
T Consensus        84 --~~~~aDiVvi~aG~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~-a~vlvvt  136 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQ---QEGESRLNLVQRNVNIFKFIIPNVVKYSPQ-CKLLIVS  136 (331)
T ss_dssp             --GGTTEEEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred             --HhCCCCEEEEccCCCC---CCCccHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEec
Confidence              3789999999998542   234567788999999999999999998644 2455544

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.10  E-value=0.00025  Score=64.70  Aligned_cols=74  Identities=16%  Similarity=0.157  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~--~~   96 (366)
                      .+.+|||+||+|-||...++.+...|.+         |++++++..+.......+...+ .|..+.+   .+.+..  .+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~~~~g  217 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAH---------TIAVASTDEKLKIAKEYGAEYL-INASKEDILRQVLKFTNGKG  217 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCcEE-EeCCCchHHHHHHHHhCCCC
Confidence            5678999999999999999999889999         9999987654333333333322 3444333   333333  26


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||+++|
T Consensus       218 ~D~vid~~g  226 (334)
T 3qwb_A          218 VDASFDSVG  226 (334)
T ss_dssp             EEEEEECCG
T ss_pred             ceEEEECCC
Confidence            999999998

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.08  E-value=0.0039  Score=56.38  Aligned_cols=106  Identities=13%  Similarity=0.050  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----c-cc----ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----E-DM----FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~-~~----~~v~~~~~D~~~~~~l   90 (366)
                      +.+||.|+|| |.+|..++..|+..+.  +         |..++....+...    . ..    ..+.+. .|  +    
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~e---------l~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~----   66 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEE---------FVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E----   66 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCE---------EEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C----
Confidence            4479999998 9999999999998875  6         8889885432110    0 00    112222 21  2    


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      .+.++++|+||..++....   ......+.+..|+.....+.+.+.+++.. ..+|.+
T Consensus        67 ~~a~~~aDvVii~ag~~~~---~g~~R~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~  120 (318)
T 1ez4_A           67 YSDCKDADLVVITAGAPQK---PGESRLDLVNKNLNILSSIVKPVVDSGFD-GIFLVA  120 (318)
T ss_dssp             GGGGTTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHTTCC-SEEEEC
T ss_pred             HHHhCCCCEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence            3347899999999985432   22344567889999999999999998754 245554

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.07  E-value=0.0051  Score=55.61  Aligned_cols=105  Identities=12%  Similarity=0.005  Sum_probs=70.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----ccc------ccceEEEccCCChhH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDM------FCHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~------~~v~~~~~D~~~~~~   89 (366)
                      ++|||.|+|| |.+|..++..|...|.  +         |..++....+...    ...      ..+.+. .  .+   
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~e---------i~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~--~~---   68 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDE---------LVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-A--GE---   68 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSE---------EEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-E--CC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-e--CC---
Confidence            4579999998 9999999999998874  6         8888876432110    000      111222 2  12   


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                       .++++++|+||.+++...   .........+..|+.....+.+.+.+++.. ..+|.
T Consensus        69 -~~a~~~aDvVvi~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv  121 (317)
T 3d0o_A           69 -YSDCHDADLVVICAGAAQ---KPGETRLDLVSKNLKIFKSIVGEVMASKFD-GIFLV  121 (317)
T ss_dssp             -GGGGTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTTCC-SEEEE
T ss_pred             -HHHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhCCC-cEEEE
Confidence             344789999999998542   222344566788999999999999998654 24444

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.06  E-value=0.0015  Score=60.09  Aligned_cols=73  Identities=16%  Similarity=0.119  Sum_probs=47.7

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCC
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      .|.++|+|.|+| .|.+|..+++.|.+.|++         |++++|++.........++.    ...+.+++.+..+.+|
T Consensus        18 ~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~---------V~v~dr~~~~~~~l~~~g~~----~~~s~~e~~~~a~~~D   83 (358)
T 4e21_A           18 LYFQSMQIGMIG-LGRMGADMVRRLRKGGHE---------CVVYDLNVNAVQALEREGIA----GARSIEEFCAKLVKPR   83 (358)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHTTTCB----CCSSHHHHHHHSCSSC
T ss_pred             hhhcCCEEEEEC-chHHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHCCCE----EeCCHHHHHhcCCCCC
Confidence            344668999999 699999999999999999         99999886543322222222    1233343333334459


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||-+..
T Consensus        84 vVi~~vp   90 (358)
T 4e21_A           84 VVWLMVP   90 (358)
T ss_dssp             EEEECSC
T ss_pred             EEEEeCC
Confidence            9997765

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.06  E-value=0.00037  Score=64.35  Aligned_cols=75  Identities=8%  Similarity=-0.054  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      +.++|+|+|+ |-+|+.+++.|...|.+         |++++|+..+.......+...+.....+.+.+.+.+.++|+||
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~---------V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI  235 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQ---------VQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLI  235 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEE
Confidence            4579999998 99999999999999998         9999998654322211111111112234456667778999999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      ++++.
T Consensus       236 ~~~~~  240 (361)
T 1pjc_A          236 GAVLV  240 (361)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99985

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.05  E-value=0.00059  Score=64.90  Aligned_cols=73  Identities=14%  Similarity=0.029  Sum_probs=47.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEE-------------EccCCChhH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFH-------------LVDLRVMDN   89 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~-------------~~D~~~~~~   89 (366)
                      +|+|.|+| +|++|..++..|.+.|++         |+++++++.+..........+.             .+.+.-..+
T Consensus         2 ~mkI~VIG-~G~vG~~lA~~La~~G~~---------V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d   71 (450)
T 3gg2_A            2 SLDIAVVG-IGYVGLVSATCFAELGAN---------VRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTE   71 (450)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESC
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhcCCE---------EEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECC
Confidence            37999999 599999999999999999         9999988653221111000000             011111123


Q ss_pred             HHhhhcCCCEEEEccc
Q 044498           90 CLRMTSGVDNMSNLAA  105 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~  105 (366)
                      +.++++++|+||-+.+
T Consensus        72 ~~ea~~~aDvViiaVp   87 (450)
T 3gg2_A           72 IEQAVPEADIIFIAVG   87 (450)
T ss_dssp             HHHHGGGCSEEEECCC
T ss_pred             HHHHHhcCCEEEEEcC
Confidence            4556778999998876

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.04  E-value=0.0035  Score=57.69  Aligned_cols=96  Identities=11%  Similarity=0.023  Sum_probs=52.4

Q ss_pred             CeEEEEcCCCchhHHHHH-HHHHcCCCCCCCCCccEEEEEeCCCc-cccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIAR-RLKSERHYSTSIPNALYIIASDWNKN-EHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~-~L~~~g~~~~~~~~~~~V~~~~r~~~-~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |+|.|+||||++|+.|++ -|.+..+-      .+.+..++.... +..... .+.....-+..+.+.    ++++|+||
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~------~~~l~~~ss~~aG~~~~~~-~~~~~~~~~~~~~~~----~~~~Dvvf   69 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFD------LIEPVFFSTSQIGVPAPNF-GKDAGMLHDAFDIES----LKQLDAVI   69 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGG------GSEEEEEESSSTTSBCCCS-SSCCCBCEETTCHHH----HTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCC------ceEEEEEeccccCcCHHHh-CCCceEEEecCChhH----hccCCEEE
Confidence            589999999999999999 44444421      011555543222 111100 011111112223222    47899999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      .|.+                   ...+......+.+.|.+ .++|=.|+
T Consensus        70 ~a~~-------------------~~~s~~~~~~~~~~G~k-~~VID~ss   98 (370)
T 3pzr_A           70 TCQG-------------------GSYTEKVYPALRQAGWK-GYWIDAAS   98 (370)
T ss_dssp             ECSC-------------------HHHHHHHHHHHHHTTCC-CEEEECSS
T ss_pred             ECCC-------------------hHHHHHHHHHHHHCCCC-EEEEeCCc
Confidence            9988                   23345666666777863 04554554

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.04  E-value=0.00085  Score=60.47  Aligned_cols=77  Identities=9%  Similarity=-0.037  Sum_probs=56.5

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCC---cccccc-----ccccceEEEccCCChhHHH
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNK---NEHMME-----DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~---~~~~~~-----~~~~v~~~~~D~~~~~~l~   91 (366)
                      ...++++|+|+ |-+|+.++..|.+.|. +         |++++|..   .+....     ...+..+...++.+.+++.
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~---------V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~  221 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKE---------ISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLR  221 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCE---------EEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHH
Confidence            36789999997 8999999999999998 7         99999983   222111     0112234455677777788


Q ss_pred             hhhcCCCEEEEccccc
Q 044498           92 RMTSGVDNMSNLAADM  107 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~  107 (366)
                      +.+.++|+||++....
T Consensus       222 ~~l~~aDiIINaTp~G  237 (315)
T 3tnl_A          222 KEIAESVIFTNATGVG  237 (315)
T ss_dssp             HHHHTCSEEEECSSTT
T ss_pred             hhhcCCCEEEECccCC
Confidence            8888999999998743

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.03  E-value=0.0047  Score=56.28  Aligned_cols=94  Identities=20%  Similarity=0.099  Sum_probs=56.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC-Cc-cccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN-KN-EHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~-~~-~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      +||.|.||||++|..|++.|.+..+.      .+.+..++.. .. +.....  +.+...-++..     ..++++|+||
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp------~~el~~~~s~~~aG~~~~~~--~~~~~~~~~~~-----~~~~~~Dvvf   68 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFP------ASAVRFFASARSQGRKLAFR--GQEIEVEDAET-----ADPSGLDIAL   68 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCC------EEEEEEEECTTTSSCEEEET--TEEEEEEETTT-----SCCTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC------ceEEEEEECcccCCCceeec--CCceEEEeCCH-----HHhccCCEEE
Confidence            68999999999999999988876543      0014444322 21 111111  11221112221     2347899999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      .|++                   -..+......+.+.|+   ++|=.|+..
T Consensus        69 ~a~~-------------------~~~s~~~a~~~~~~G~---~vID~Sa~~   97 (344)
T 3tz6_A           69 FSAG-------------------SAMSKVQAPRFAAAGV---TVIDNSSAW   97 (344)
T ss_dssp             ECSC-------------------HHHHHHHHHHHHHTTC---EEEECSSTT
T ss_pred             ECCC-------------------hHHHHHHHHHHHhCCC---EEEECCCcc
Confidence            9988                   3345566666777777   588888754

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.01  E-value=0.0014  Score=56.77  Aligned_cols=61  Identities=16%  Similarity=0.237  Sum_probs=40.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEE-EeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA-SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~-~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      +||||.|+|+ |.+|+.+++.+.+.+++         +.+ +++.....     .++..       .+++.+++ ++|+|
T Consensus         2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~e---------Lva~~d~~~~~~-----~gv~v-------~~dl~~l~-~~DVv   58 (243)
T 3qy9_A            2 ASMKILLIGY-GAMNQRVARLAEEKGHE---------IVGVIENTPKAT-----TPYQQ-------YQHIADVK-GADVA   58 (243)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEECSSCC-------CCSCB-------CSCTTTCT-TCSEE
T ss_pred             CceEEEEECc-CHHHHHHHHHHHhCCCE---------EEEEEecCcccc-----CCCce-------eCCHHHHh-CCCEE
Confidence            4789999999 99999999999988667         665 56654321     11111       11223334 78999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |+++.
T Consensus        59 IDft~   63 (243)
T 3qy9_A           59 IDFSN   63 (243)
T ss_dssp             EECSC
T ss_pred             EEeCC
Confidence            98876

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.98  E-value=0.0006  Score=62.35  Aligned_cols=73  Identities=14%  Similarity=0.075  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~~~~d   98 (366)
                      .+.+|||+|+ |-||..+++.+...|.+         |+++++++.+.......++..+ .|..+.+   .+.+...++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~~~~~~d  232 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLN---------VVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKVGGVH  232 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHHSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHHHhCCCC
Confidence            4578999999 66999999999889999         9999987654333333344433 4555432   2333335799


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||+++|
T Consensus       233 ~vid~~g  239 (339)
T 1rjw_A          233 AAVVTAV  239 (339)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999988

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.97  E-value=0.0006  Score=62.57  Aligned_cols=73  Identities=14%  Similarity=0.126  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~~--   95 (366)
                      ...+|||+|+ |.+|..+++.+...|. +         |+++++++.+.......++..+ .|..+.+   .+.++..  
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~---------Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYP---------VIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDITDGN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCS---------EEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCE---------EEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCCC
Confidence            4578999999 9999999998888998 8         9999987654333333343432 3444432   2333322  


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||++++
T Consensus       236 g~D~vid~~g  245 (348)
T 2d8a_A          236 GVDVFLEFSG  245 (348)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999988

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.97  E-value=0.007  Score=54.65  Aligned_cols=100  Identities=17%  Similarity=0.140  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----cc------ccceEEEccCCChhH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----DM------FCHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----~~------~~v~~~~~D~~~~~~   89 (366)
                      +++||.|+|+ |.+|..++..|...|.  +         |.+++++.......    ..      ..+.+..   .+   
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~e---------v~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~---~~---   68 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADE---------IVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH---GD---   68 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE---CC---
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCE---------EEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc---Cc---
Confidence            4579999998 9999999999988774  6         99999875421110    00      0112221   12   


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                       .+.++++|+||-+++....+   .......+..|......+.+.+.++..+
T Consensus        69 -~~al~~aDvViia~~~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~p~  116 (316)
T 1ldn_A           69 -YDDCRDADLVVICAGANQKP---GETRLDLVDKNIAIFRSIVESVMASGFQ  116 (316)
T ss_dssp             -GGGTTTCSEEEECCSCCCCT---TTCSGGGHHHHHHHHHHHHHHHHHHTCC
T ss_pred             -HHHhCCCCEEEEcCCCCCCC---CCCHHHHHHcChHHHHHHHHHHHHHCCC
Confidence             23578999999999865422   2244566788899999999999888644

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.97  E-value=0.006  Score=47.88  Aligned_cols=86  Identities=15%  Similarity=0.193  Sum_probs=58.2

Q ss_pred             CCCeEEEEcCC---CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVG---GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGat---G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      +.++|.|+|+|   |.+|..+++.|++.|++         |+.++.....-     .+       +.-..++.++.+.+|
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~---------V~~vnp~~~~i-----~G-------~~~~~s~~el~~~vD   71 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFE---------VLPVNPNYDEI-----EG-------LKCYRSVRELPKDVD   71 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCE---------EEEECTTCSEE-----TT-------EECBSSGGGSCTTCC
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCE---------EEEeCCCCCeE-----CC-------eeecCCHHHhCCCCC
Confidence            56789999997   99999999999999999         99987653211     11       112223444455799


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +++-+..                   ......+++.+.+.+++  .++..+
T Consensus        72 lvii~vp-------------------~~~v~~v~~~~~~~g~~--~i~~~~  101 (138)
T 1y81_A           72 VIVFVVP-------------------PKVGLQVAKEAVEAGFK--KLWFQP  101 (138)
T ss_dssp             EEEECSC-------------------HHHHHHHHHHHHHTTCC--EEEECT
T ss_pred             EEEEEeC-------------------HHHHHHHHHHHHHcCCC--EEEEcC
Confidence            9986655                   23445566667778887  666544

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.96  E-value=0.0045  Score=57.07  Aligned_cols=97  Identities=13%  Similarity=0.114  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHH-HHcCCCCCCCCCccEEEEEeCCCc-cccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRL-KSERHYSTSIPNALYIIASDWNKN-EHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L-~~~g~~~~~~~~~~~V~~~~r~~~-~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      +++|.|+||||++|+.|+++| .+..+.      .+.+..++.... +...... +.....-+..+.+.    ++++|+|
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~------~~~l~~~ss~~aG~~~~~~~-~~~~~v~~~~~~~~----~~~vDvv   72 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFD------LIEPVFFSTSNAGGKAPSFA-KNETTLKDATSIDD----LKKCDVI   72 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGG------GSEEEEEESSCTTSBCCTTC-CSCCBCEETTCHHH----HHTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCC------ceEEEEEechhcCCCHHHcC-CCceEEEeCCChhH----hcCCCEE
Confidence            479999999999999999944 444421      011555543221 1111000 11111112223322    4689999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      |.|++                   -..+..+...+.+.|++ .++|=.|+
T Consensus        73 f~a~~-------------------~~~s~~~~~~~~~~G~k-~~VID~ss  102 (377)
T 3uw3_A           73 ITCQG-------------------GDYTNDVFPKLRAAGWN-GYWIDAAS  102 (377)
T ss_dssp             EECSC-------------------HHHHHHHHHHHHHTTCC-SEEEECSS
T ss_pred             EECCC-------------------hHHHHHHHHHHHHCCCC-EEEEeCCc
Confidence            99988                   33355666667777863 04554554

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.94  E-value=0.00048  Score=63.11  Aligned_cols=74  Identities=14%  Similarity=0.069  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceE-EEccCCCh-hHHHhhhc--CC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEF-HLVDLRVM-DNCLRMTS--GV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~-~~~D~~~~-~~l~~~~~--~~   97 (366)
                      ...+|||+||+|-||...++.+...|.+         |++++++..+.......+... +..+ .+. +.+.+...  ++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~  228 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAK---------VIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGV  228 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCc
Confidence            5678999999999999999999999999         999998766543333333333 3333 222 23333333  69


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||+++|
T Consensus       229 Dvvid~~g  236 (342)
T 4eye_A          229 DMVVDPIG  236 (342)
T ss_dssp             EEEEESCC
T ss_pred             eEEEECCc
Confidence            99999998

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.94  E-value=0.00082  Score=60.33  Aligned_cols=73  Identities=7%  Similarity=0.018  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+.+|||+||+|.+|..+++.+...|.+         |++++++..+.......+...+ .|..+.+++.+.+.++|+||
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~---------Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~vi  194 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLR---------VLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVL  194 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE---------EEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHhcCCCEE-EECCcchhHHHHhcCceEEE
Confidence            5678999999999999999988889999         9999987655433333343433 35444123444447899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      + +|
T Consensus       195 d-~g  197 (302)
T 1iz0_A          195 E-VR  197 (302)
T ss_dssp             E-CS
T ss_pred             E-CC
Confidence            9 87

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.93  E-value=0.0057  Score=53.31  Aligned_cols=103  Identities=11%  Similarity=-0.027  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------------------------c--cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------------------------E--DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------------------------~--~~   74 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        +++++...-....                         .  ..
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~--------i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~   97 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGT--------LVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD   97 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSE--------EEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCe--------EEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence            4578999997 669999999999999641        7777654311000                         0  01


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+..+++ .+.+.++++++|+||.+..                  |...-..+-+++.+.+++   +|+.+....+
T Consensus        98 ~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d------------------~~~~r~~l~~~~~~~~~p---~i~~~~~g~~  155 (251)
T 1zud_1           98 IQLTALQQRLT-GEALKDAVARADVVLDCTD------------------NMATRQEINAACVALNTP---LITASAVGFG  155 (251)
T ss_dssp             SEEEEECSCCC-HHHHHHHHHHCSEEEECCS------------------SHHHHHHHHHHHHHTTCC---EEEEEEEBTE
T ss_pred             CEEEEEeccCC-HHHHHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHhCCC---EEEEeccccc
Confidence            11233333333 3556777888999997755                  133344567788888775   8887765444


Q ss_pred             C
Q 044498          155 P  155 (366)
Q Consensus       155 g  155 (366)
                      |
T Consensus       156 G  156 (251)
T 1zud_1          156 G  156 (251)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.93  E-value=0.0078  Score=54.42  Aligned_cols=108  Identities=7%  Similarity=-0.083  Sum_probs=73.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----ccc-----ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDM-----FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~-----~~v~~~~~D~~~~~~l   90 (366)
                      .++||.|+|+ |.+|+.++..|...|.  +         |..++........    ...     ....++..  .|++  
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~e---------v~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t--~d~~--   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADE---------VALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG--KDYS--   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSE---------EEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE--SSSC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCe---------EEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc--CCHH--
Confidence            4579999998 9999999999999886  7         9999876532110    000     01112211  1222  


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       . ++++|+||-+||...   ....+..+.+..|+.....+.+.+.+++.. ..++.+|
T Consensus        86 -~-~~daDiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~~P~-a~ilvvt  138 (330)
T 3ldh_A           86 -V-SAGSKLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKHSPD-CLKELHP  138 (330)
T ss_dssp             -S-CSSCSEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred             -H-hCCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCCC-ceEEeCC
Confidence             2 689999999998543   334456778999999999999999988654 2455444

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.92  E-value=0.003  Score=58.60  Aligned_cols=69  Identities=14%  Similarity=0.062  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|+|+|+ |.+|+.+++.+.+.|++         |++++..+.......  .-.++..|+.|.+.+.++.+.+|+|.
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~~---------viv~d~~~~~p~~~~--ad~~~~~~~~d~~~l~~~~~~~dvi~   78 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGYK---------VVVLDPSEDCPCRYV--AHEFIQAKYDDEKALNQLGQKCDVIT   78 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCTTCTTGGG--SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEECCCCChhhhh--CCEEEECCCCCHHHHHHHHHhCCcce
Confidence            5679999995 89999999999999999         999987654322111  12677899999999999888899875


Q ss_pred             E
Q 044498          102 N  102 (366)
Q Consensus       102 ~  102 (366)
                      .
T Consensus        79 ~   79 (377)
T 3orq_A           79 Y   79 (377)
T ss_dssp             E
T ss_pred             e
Confidence            3

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.90  E-value=0.0016  Score=59.39  Aligned_cols=71  Identities=8%  Similarity=-0.033  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi  101 (366)
                      .++|+|+|+ |.+|+.+++.|.++|+          |+++++++.... ....++.++.+|.++++.+.++ ++++|.||
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~----------v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi  182 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV----------FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVI  182 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE----------EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc----------EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEE
Confidence            468999996 9999999999988763          677777765544 4445679999999999999887 78899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+.+
T Consensus       183 ~~~~  186 (336)
T 1lnq_A          183 VDLE  186 (336)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            6654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.88  E-value=0.00042  Score=61.31  Aligned_cols=71  Identities=20%  Similarity=0.150  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccc--eEEEccCCChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCH--EFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v--~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      .+++++|+|+ |.+|+.++..|.+.|.+         |++++|+..+..... ..+.  ..   +..+.+++.+  .++|
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~---------V~v~~R~~~~~~~la~~~~~~~~~---~~~~~~~~~~--~~~D  182 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCA---------VTITNRTVSRAEELAKLFAHTGSI---QALSMDELEG--HEFD  182 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSHHHHHHHHHHTGGGSSE---EECCSGGGTT--CCCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCE---------EEEEECCHHHHHHHHHHhhccCCe---eEecHHHhcc--CCCC
Confidence            5679999998 78999999999999988         999998865322111 0000  11   1222232222  5899


Q ss_pred             EEEEccccc
Q 044498           99 NMSNLAADM  107 (366)
Q Consensus        99 ~vi~~a~~~  107 (366)
                      +||++++..
T Consensus       183 ivVn~t~~~  191 (271)
T 1nyt_A          183 LIINATSSG  191 (271)
T ss_dssp             EEEECCSCG
T ss_pred             EEEECCCCC
Confidence            999999954

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.87  E-value=0.0046  Score=56.05  Aligned_cols=106  Identities=13%  Similarity=0.013  Sum_probs=70.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----c-cc----ccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----E-DM----FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~-~~----~~v~~~~~D~~~~~~l   90 (366)
                      +++||.|+|| |.+|..++..|+..+.  +         |..++....+...    . ..    ..+.+. .|  +    
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~e---------l~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~----   70 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQE---------IGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--E----   70 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCE---------EEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--C----
Confidence            4579999998 9999999999988775  5         8888885432111    0 00    112222 21  2    


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      .+.++++|+||..++...   .........+..|+.....+.+.+.+++.. .++|.+
T Consensus        71 ~~a~~~aDvVii~ag~~~---k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~  124 (326)
T 2zqz_A           71 YSDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFN-GIFLVA  124 (326)
T ss_dssp             GGGGGGCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHHTCC-SEEEEC
T ss_pred             HHHhCCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEe
Confidence            334789999999998542   222344567888999999999999988744 245554

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.86  E-value=0.0029  Score=59.23  Aligned_cols=70  Identities=7%  Similarity=0.047  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++++|+|+|+ |.+|+.+++.+.+.|++         |++++ ...............+.+++.|.+.+.++.+.+|+|+
T Consensus        23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~---------v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~   91 (403)
T 3k5i_A           23 NSRKVGVLGG-GQLGRMLVESANRLNIQ---------VNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVT   91 (403)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCE---------EEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEE
Confidence            4679999996 89999999999999999         99998 5432221111112567899999999999999999887


Q ss_pred             E
Q 044498          102 N  102 (366)
Q Consensus       102 ~  102 (366)
                      .
T Consensus        92 ~   92 (403)
T 3k5i_A           92 A   92 (403)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.84  E-value=0.0022  Score=57.40  Aligned_cols=37  Identities=11%  Similarity=-0.019  Sum_probs=31.3

Q ss_pred             CCCe-EEEE-cCC-----------------CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLR-ISSI-GVG-----------------GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~-vlIt-Gat-----------------G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .+++ |||| |+|                 |..|.++++.++++|++         |+.+.+...
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~---------V~lv~g~~s   90 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYG---------VLFLYRARS   90 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCE---------EEEEEETTS
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCE---------EEEEecCCC
Confidence            4566 9999 667                 99999999999999999         999887543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.81  E-value=0.0058  Score=55.17  Aligned_cols=100  Identities=11%  Similarity=-0.022  Sum_probs=66.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccc----c-cccc----cceEEEccCCChhHHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHM----M-EDMF----CHEFHLVDLRVMDNCL   91 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~----~-~~~~----~v~~~~~D~~~~~~l~   91 (366)
                      +|||.|+|+ |.+|..++..|...|+  +         |.+++++.....    . ....    ...+...  .+.    
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~---------V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----   70 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIARE---------IVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----   70 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----
Confidence            479999997 9999999999999998  8         999998753221    0 0100    1111111  122    


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ..++++|+||-+++...   ....+....+..|+.....+++.+.+.+.+
T Consensus        71 ~~~~~aD~Vii~v~~~~---~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~  117 (319)
T 1lld_A           71 EICRDADMVVITAGPRQ---KPGQSRLELVGATVNILKAIMPNLVKVAPN  117 (319)
T ss_dssp             GGGTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHhCCCCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            24678999999987432   112344566778888888888888876543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.81  E-value=0.0077  Score=54.04  Aligned_cols=104  Identities=12%  Similarity=0.079  Sum_probs=64.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc--c--cc-----ccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM--E--DM-----FCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~--~--~~-----~~v~~~~~D~~~~~~l~~   92 (366)
                      |||.|+|| |.+|..++..|...|+  +         |..++++......  .  ..     ..+.+..   .+.    +
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~e---------V~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~   63 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSE---------LVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----S   63 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----H
Confidence            58999998 9999999999999998  8         9999987542110  0  00     0112221   222    3


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      .++++|+||.+++...   .......+.+..|+.....+++.+.+.+.. ..+|.+
T Consensus        64 a~~~aDvVIi~~~~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-~~vi~~  115 (304)
T 2v6b_A           64 ELADAQVVILTAGANQ---KPGESRLDLLEKNADIFRELVPQITRAAPD-AVLLVT  115 (304)
T ss_dssp             GGTTCSEEEECC---------------CHHHHHHHHHHHHHHHHHHCSS-SEEEEC
T ss_pred             HhCCCCEEEEcCCCCC---CCCCcHHHHHHhHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence            4789999999997432   112334556788999999999999887543 244443

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.79  E-value=0.00012  Score=58.09  Aligned_cols=70  Identities=13%  Similarity=0.165  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .++|+|+|+ |.+|+.+++.|.+.|++         |++++|+..+.... ...++...     ..+++.+.+.++|+||
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~---------v~v~~r~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~Divi   85 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYK---------VTVAGRNIDHVRAFAEKYEYEYV-----LINDIDSLIKNNDVII   85 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCE---------EEEEESCHHHHHHHHHHHTCEEE-----ECSCHHHHHHTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEcCCHHHHHHHHHHhCCceE-----eecCHHHHhcCCCEEE
Confidence            579999995 99999999999999998         99999986543221 11122222     2233555677899999


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      .+.+..
T Consensus        86 ~at~~~   91 (144)
T 3oj0_A           86 TATSSK   91 (144)
T ss_dssp             ECSCCS
T ss_pred             EeCCCC
Confidence            988743

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.78  E-value=0.006  Score=54.88  Aligned_cols=102  Identities=10%  Similarity=0.039  Sum_probs=65.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccccc---c-------ccceEEEccCCChhHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMMED---M-------FCHEFHLVDLRVMDNC   90 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~~---~-------~~v~~~~~D~~~~~~l   90 (366)
                      ||||.|+| +|.+|..++..|.+.|  ++         |.+++++........   .       ..+....   .+.   
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~---------V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~---   64 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADD---------YVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW---   64 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG---
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCE---------EEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCH---
Confidence            47999999 6999999999999998  78         999998754321110   0       0112211   222   


Q ss_pred             HhhhcCCCEEEEcccccCCcc-ccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           91 LRMTSGVDNMSNLAADMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                       +.++++|+||-+++...... ............|+.....+++.+.+...+
T Consensus        65 -~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~  115 (309)
T 1hyh_A           65 -AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH  115 (309)
T ss_dssp             -GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred             -HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence             34678999998888432100 011234456778888889999988887543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.74  E-value=0.0016  Score=58.74  Aligned_cols=67  Identities=4%  Similarity=-0.007  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      +||+|.|+| .|.+|..+++.|.+.|++         |++++|++.........++..       ..++.++++++|+||
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~---------V~~~dr~~~~~~~l~~~g~~~-------~~~~~~~~~~aDvvi   82 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFK---------VTVWNRTLSKCDELVEHGASV-------CESPAEVIKKCKYTI   82 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEE
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHCCCeE-------cCCHHHHHHhCCEEE
Confidence            678999998 699999999999999999         999999876543332222221       123444556788888


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus        83 ~~vp   86 (310)
T 3doj_A           83 AMLS   86 (310)
T ss_dssp             ECCS
T ss_pred             EEcC
Confidence            7654

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.72  E-value=0.0029  Score=57.45  Aligned_cols=107  Identities=16%  Similarity=0.004  Sum_probs=70.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----cc------ccceEEEccCCChhHHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----DM------FCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----~~------~~v~~~~~D~~~~~~l~   91 (366)
                      ++||.|+|| |.+|..++..|...|+ +         |..++++.......    ..      ....+...  +|   + 
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~---------V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-   77 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGD---------VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE--NN---Y-   77 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCE---------EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCe---------EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC--CC---H-
Confidence            468999998 9999999999999998 8         99999876532210    00      00111110  12   2 


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      +.++++|+||-+++....+   .....+....|+.....+.+.+.+...+ ..+|.+|
T Consensus        78 ~al~~aD~VI~avg~p~k~---g~tr~dl~~~n~~i~~~i~~~i~~~~p~-a~viv~t  131 (328)
T 2hjr_A           78 EYLQNSDVVIITAGVPRKP---NMTRSDLLTVNAKIVGSVAENVGKYCPN-AFVICIT  131 (328)
T ss_dssp             GGGTTCSEEEECCSCCCCT---TCCSGGGHHHHHHHHHHHHHHHHHHCTT-CEEEECC
T ss_pred             HHHCCCCEEEEcCCCCCCC---CCchhhHHhhhHHHHHHHHHHHHHHCCC-eEEEEec
Confidence            3578999999998743211   1233456778888899999988887643 2444443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.71  E-value=0.0014  Score=60.14  Aligned_cols=74  Identities=19%  Similarity=0.234  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhh--c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMT--S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~--~   95 (366)
                      ...+|||+||+|-||..+++.+... |.+         |+++++++.+.......+...+ .|..+.+.   +.++.  .
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~---------Vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGAT---------IIGVDVREEAVEAAKRAGADYV-INASMQDPLAEIRRITESK  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCE---------EEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTS
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCe---------EEEEcCCHHHHHHHHHhCCCEE-ecCCCccHHHHHHHHhcCC
Confidence            4578999999999999999999998 999         9999987654332222233322 34544332   44444  3


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||+++|
T Consensus       240 ~~d~vi~~~g  249 (347)
T 1jvb_A          240 GVDAVIDLNN  249 (347)
T ss_dssp             CEEEEEESCC
T ss_pred             CceEEEECCC
Confidence            6999999998

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.70  E-value=0.0024  Score=58.97  Aligned_cols=74  Identities=9%  Similarity=0.029  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ...+|||+|+ |-||..+++.+...|.+         |+++++++.+..... ..+...+ .|..+.+.+.++..++|+|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~---------Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~D~v  255 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSK---------VTVISTSPSKKEEALKNFGADSF-LVSRDQEQMQAAAGTLDGI  255 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCGGGHHHHHHTSCCSEE-EETTCHHHHHHTTTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHhcCCceE-EeccCHHHHHHhhCCCCEE
Confidence            4578999996 99999999998889999         999998765533222 3343432 4566666677666789999


Q ss_pred             EEcccc
Q 044498          101 SNLAAD  106 (366)
Q Consensus       101 i~~a~~  106 (366)
                      |+++|.
T Consensus       256 id~~g~  261 (366)
T 1yqd_A          256 IDTVSA  261 (366)
T ss_dssp             EECCSS
T ss_pred             EECCCc
Confidence            999983

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.70  E-value=0.0016  Score=57.93  Aligned_cols=37  Identities=24%  Similarity=0.331  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      .+++|.|+|+ |.+|+.++..|.+.|++         |+++++++..
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~---------V~l~d~~~~~   39 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFA---------VTAYDINTDA   39 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCe---------EEEEeCCHHH
Confidence            4679999985 99999999999999999         9999987653

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.70  E-value=0.0012  Score=60.71  Aligned_cols=75  Identities=9%  Similarity=-0.064  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccc-cceEEEc------cC-CChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMF-CHEFHLV------DL-RVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~-~v~~~~~------D~-~~~~~l~~~   93 (366)
                      ++|+|+|+|+ |.+|..++..|.+.|++         |++++|++......... ++.+...      .+ ....++.++
T Consensus         3 ~~mki~iiG~-G~~G~~~a~~L~~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (359)
T 1bg6_A            3 ESKTYAVLGL-GNGGHAFAAYLALKGQS---------VLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA   72 (359)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH
Confidence            4579999995 99999999999999999         99999875432211111 1111100      01 011234455


Q ss_pred             hcCCCEEEEcccc
Q 044498           94 TSGVDNMSNLAAD  106 (366)
Q Consensus        94 ~~~~d~vi~~a~~  106 (366)
                      +.++|+||-+...
T Consensus        73 ~~~~D~vi~~v~~   85 (359)
T 1bg6_A           73 VKDADVILIVVPA   85 (359)
T ss_dssp             HTTCSEEEECSCG
T ss_pred             HhcCCEEEEeCCc
Confidence            6789999988763

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.70  E-value=0.0013  Score=62.34  Aligned_cols=72  Identities=17%  Similarity=0.083  Sum_probs=46.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEE-------------ccCCChhHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHL-------------VDLRVMDNC   90 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~-------------~D~~~~~~l   90 (366)
                      |+|.|+| +|++|..++..|.+.|++         |+++++++.+.......+..+..             +.+.-..++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~---------V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~   70 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHE---------VIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDF   70 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCH
Confidence            5899999 699999999999999999         99999876532221110001100             111111223


Q ss_pred             HhhhcCCCEEEEccc
Q 044498           91 LRMTSGVDNMSNLAA  105 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~  105 (366)
                      .++++++|+||-+..
T Consensus        71 ~~~~~~aDvviiaVp   85 (436)
T 1mv8_A           71 KKAVLDSDVSFICVG   85 (436)
T ss_dssp             HHHHHTCSEEEECCC
T ss_pred             HHHhccCCEEEEEcC
Confidence            445678999998876

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.67  E-value=0.00096  Score=59.82  Aligned_cols=74  Identities=15%  Similarity=-0.083  Sum_probs=51.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ..++|+|+|+ |.+|+.++..|.+.|. +         |++++|...+..... ..+...  .+..+.+++.+.+.++|+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~---------V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAER---------IDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDI  207 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSE---------EEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCE---------EEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCE
Confidence            5679999997 8899999999999997 7         999998765432211 001000  022233456677789999


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      ||++++..
T Consensus       208 vIn~t~~~  215 (297)
T 2egg_A          208 IINTTSVG  215 (297)
T ss_dssp             EEECSCTT
T ss_pred             EEECCCCC
Confidence            99999854

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.67  E-value=0.0051  Score=57.02  Aligned_cols=69  Identities=16%  Similarity=0.101  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |++|+|+|+ |.+|+.+++.|.+.|++         |++++..+.......  .-.++..|+.|.+.+.++..++|.|+.
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~---------v~~~~~~~~~~~~~~--~~~~~~~~~~d~~~l~~~~~~~d~v~~   68 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFY---------VIVLDPTPRSPAGQV--ADEQIVAGFFDSERIEDLVKGSDVTTY   68 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSTTCTTGGG--SSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeCCCCCchhhh--CceEEECCCCCHHHHHHHHhcCCEEEe
Confidence            578999996 89999999999999999         999886543321111  114677899999998888889999885


Q ss_pred             c
Q 044498          103 L  103 (366)
Q Consensus       103 ~  103 (366)
                      .
T Consensus        69 ~   69 (380)
T 3ax6_A           69 D   69 (380)
T ss_dssp             S
T ss_pred             c
Confidence            3

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.66  E-value=0.0027  Score=59.75  Aligned_cols=69  Identities=7%  Similarity=-0.066  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|+|+|+ |.+|+.+++.+.+.|++         |++++..+........  -.++..|+.|.+.+.++.+++|+|+
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~~---------v~v~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~a~~~D~V~  101 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGYR---------VAVLDPDPASPAGAVA--DRHLRAAYDDEAALAELAGLCEAVS  101 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCTTCHHHHHS--SEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEECCCCcCchhhhC--CEEEECCcCCHHHHHHHHhcCCEEE
Confidence            5578999995 89999999999999999         9999865443221111  1567789999999999888999998


Q ss_pred             E
Q 044498          102 N  102 (366)
Q Consensus       102 ~  102 (366)
                      .
T Consensus       102 ~  102 (419)
T 4e4t_A          102 T  102 (419)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.64  E-value=0.0015  Score=59.83  Aligned_cols=73  Identities=12%  Similarity=-0.022  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh-hHHHhhh--cCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM-DNCLRMT--SGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~-~~l~~~~--~~~d   98 (366)
                      ...+|||+||+|-||...++.+...|.+         |+++ ++..+.......+...+. +-.+. +.+.+..  .++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~---------Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGAR---------VFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE---------EEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCce
Confidence            4678999999999999999999989999         9988 544433223334455533 22222 2233333  2699


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||+++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999988

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.63  E-value=0.0068  Score=56.29  Aligned_cols=73  Identities=16%  Similarity=0.160  Sum_probs=54.7

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--C
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--G   96 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~   96 (366)
                      |..++|+|||+|+ |.+|..+++.+.+.|++         |++++..+.......  .-.++..+..|.+.+.++++  +
T Consensus         7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~---------v~~~~~~~~~~~~~~--~d~~~~~~~~d~~~l~~~~~~~~   74 (391)
T 1kjq_A            7 LRPAATRVMLLGS-GELGKEVAIECQRLGVE---------VIAVDRYADAPAMHV--AHRSHVINMLDGDALRRVVELEK   74 (391)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCE---------EEEEESSTTCGGGGG--SSEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCE---------EEEEECCCCCchhhh--ccceEECCCCCHHHHHHHHHHcC
Confidence            4446789999986 79999999999999999         999987654321111  11566788888888887764  7


Q ss_pred             CCEEEEc
Q 044498           97 VDNMSNL  103 (366)
Q Consensus        97 ~d~vi~~  103 (366)
                      +|.|+..
T Consensus        75 ~d~v~~~   81 (391)
T 1kjq_A           75 PHYIVPE   81 (391)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            9999853

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.63  E-value=0.012  Score=52.16  Aligned_cols=99  Identities=17%  Similarity=0.156  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------------------------c--cccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------------------------M--EDMF   75 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------------------------~--~~~~   75 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        ++++|...-...                        .  ....
T Consensus        35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~--------i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v  105 (292)
T 3h8v_A           35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGK--------LLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDV  105 (292)
T ss_dssp             GGCEEEEECC-SHHHHHHHHHHHHHTCSE--------EEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTS
T ss_pred             hCCeEEEECc-CHHHHHHHHHHHHcCCCE--------EEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCc
Confidence            4578999995 999999999999998631        777765431100                        0  0122


Q ss_pred             cceEEEccCCChhHHHhhh-----------cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCcee
Q 044498           76 CHEFHLVDLRVMDNCLRMT-----------SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLT  144 (366)
Q Consensus        76 ~v~~~~~D~~~~~~l~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r  144 (366)
                      .++.+..++++.+.+..++           +++|+||.+.-                  |...-..+-++|.+.+++   
T Consensus       106 ~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D------------------n~~~R~~in~~c~~~~~P---  164 (292)
T 3h8v_A          106 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD------------------NFEARMTINTACNELGQT---  164 (292)
T ss_dssp             EEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS------------------SHHHHHHHHHHHHHHTCC---
T ss_pred             EEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc------------------chhhhhHHHHHHHHhCCC---
Confidence            3455556666655555543           57999997655                  344445677888888886   


Q ss_pred             EEEEec
Q 044498          145 FFFVSS  150 (366)
Q Consensus       145 ~I~~SS  150 (366)
                      +|+.+.
T Consensus       165 li~~gv  170 (292)
T 3h8v_A          165 WMESGV  170 (292)
T ss_dssp             EEEEEE
T ss_pred             EEEeee
Confidence            776554

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.62  E-value=0.00092  Score=57.13  Aligned_cols=71  Identities=14%  Similarity=0.079  Sum_probs=47.8

Q ss_pred             CCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEE-EeCCCccccccc-cccceEEEccCCChhHHHhhhc
Q 044498           18 HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA-SDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~-~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .+.++||+|.|+| +|.+|..+++.|.+.|++         |++ .+|++....... ..++....   .+.    +.++
T Consensus        18 ~~~m~mmkI~IIG-~G~mG~~la~~l~~~g~~---------V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~   80 (220)
T 4huj_A           18 LYFQSMTTYAIIG-AGAIGSALAERFTAAQIP---------AIIANSRGPASLSSVTDRFGASVKA---VEL----KDAL   80 (220)
T ss_dssp             TTGGGSCCEEEEE-CHHHHHHHHHHHHHTTCC---------EEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHT
T ss_pred             hhhhcCCEEEEEC-CCHHHHHHHHHHHhCCCE---------EEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHh
Confidence            3334678999999 799999999999999999         998 777765433221 11222221   112    2357


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||-+..
T Consensus        81 ~aDvVilavp   90 (220)
T 4huj_A           81 QADVVILAVP   90 (220)
T ss_dssp             TSSEEEEESC
T ss_pred             cCCEEEEeCC
Confidence            8999997654

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.61  E-value=0.0074  Score=56.12  Aligned_cols=69  Identities=16%  Similarity=0.016  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|+|+|+ |.+|+.+++.+.+.|++         |++++..+........  -..+..++.|.+.+.++++.+|+|.
T Consensus        13 ~~k~IlIlG~-G~~g~~la~aa~~~G~~---------vi~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           13 PGKTIGIIGG-GQLGRMMALAAKEMGYK---------IAVLDPTKNSPCAQVA--DIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSTTCTTTTTC--SEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE---------EEEEeCCCCCchHHhC--CceEecCcCCHHHHHHHHHhCCEee
Confidence            5679999995 88999999999999999         9999866543221111  1466789999999999988999885


Q ss_pred             E
Q 044498          102 N  102 (366)
Q Consensus       102 ~  102 (366)
                      .
T Consensus        81 ~   81 (389)
T 3q2o_A           81 Y   81 (389)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.61  E-value=0.004  Score=56.21  Aligned_cols=68  Identities=13%  Similarity=0.034  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccccccccce-EEEccCCChhHHHh-hhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVDLRVMDNCLR-MTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~-~~~~D~~~~~~l~~-~~~~~   97 (366)
                      ++|+|.|+| .|.+|..+++.|.+.|+  +         |++++|++.........++. ....   +   +.+ +++++
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~---------V~~~dr~~~~~~~a~~~G~~~~~~~---~---~~~~~~~~a   95 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGK---------IYGYDINPESISKAVDLGIIDEGTT---S---IAKVEDFSP   95 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSE---------EEEECSCHHHHHHHHHTTSCSEEES---C---TTGGGGGCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCE---------EEEEECCHHHHHHHHHCCCcchhcC---C---HHHHhhccC
Confidence            347999999 79999999999999998  8         99999886543222222221 1111   2   234 56789


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||-+..
T Consensus        96 DvVilavp  103 (314)
T 3ggo_A           96 DFVMLSSP  103 (314)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEeCC
Confidence            99997765

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.59  E-value=0.0012  Score=61.23  Aligned_cols=74  Identities=16%  Similarity=0.086  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      .+++|+|+|+ |-||+.+++.+...|.+         |++++++..+...... .+..+ ..+..+...+.+.+.++|+|
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~---------V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~~aDvV  235 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGAT---------VTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVKRADLV  235 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHcCCCEE
Confidence            5689999998 99999999999999999         9999987654221111 12221 22334456677778899999


Q ss_pred             EEcccc
Q 044498          101 SNLAAD  106 (366)
Q Consensus       101 i~~a~~  106 (366)
                      |.+++.
T Consensus       236 i~~~~~  241 (377)
T 2vhw_A          236 IGAVLV  241 (377)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998874

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.59  E-value=0.0033  Score=56.68  Aligned_cols=105  Identities=15%  Similarity=0.061  Sum_probs=68.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCcccccc----cc------ccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNEHMME----DM------FCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~~~~~----~~------~~v~~~~~D~~~~~~l~   91 (366)
                      |||.|+|+ |.+|..++..|...  |++         |.++++++......    ..      ....+..  .++.   .
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~---------V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~---~   65 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARE---------LVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SNDY---A   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESCG---G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCCH---H
Confidence            58999998 99999999999885  788         99999876532211    00      0001111  0222   2


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      . ++++|+||-+++...   .......+.+..|+.....+.+.+.+++.+ .++|.+
T Consensus        66 ~-l~~aDvViiav~~p~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~-~~viv~  117 (310)
T 1guz_A           66 D-TANSDIVIITAGLPR---KPGMTREDLLMKNAGIVKEVTDNIMKHSKN-PIIIVV  117 (310)
T ss_dssp             G-GTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCSS-CEEEEC
T ss_pred             H-HCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence            3 689999999987421   112234566778899999999998887533 245544

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.57  E-value=0.0028  Score=60.56  Aligned_cols=39  Identities=15%  Similarity=0.214  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCcc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      |.+||+|.|+| +|++|..++..|.+.  |++         |+++++++.+
T Consensus         2 M~~~mkI~VIG-~G~mG~~lA~~La~~g~G~~---------V~~~d~~~~~   42 (467)
T 2q3e_A            2 MFEIKKICCIG-AGYVGGPTCSVIAHMCPEIR---------VTVVDVNESR   42 (467)
T ss_dssp             CCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSE---------EEEECSCHHH
T ss_pred             CCCccEEEEEC-CCHHHHHHHHHHHhcCCCCE---------EEEEECCHHH
Confidence            33568999999 699999999999998  799         9999987653

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.57  E-value=0.0088  Score=54.08  Aligned_cols=104  Identities=13%  Similarity=0.037  Sum_probs=68.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccccc-----cc----cceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMMED-----MF----CHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~~-----~~----~v~~~~~D~~~~~~l~~   92 (366)
                      |||.|+|+ |.+|..++..|...|+  +         |.++++++.......     ..    ...+. .  ++.    +
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~---------V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~----~   63 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFARE---------MVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDY----A   63 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCG----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCe---------EEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCH----H
Confidence            58999998 9999999999999998  8         999998754221110     00    11121 1  232    2


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      .++++|+||-+++...   .......+....|+.....+++.+.+.... ..+|.+
T Consensus        64 ~~~~aDvViiav~~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~-~~ii~~  115 (319)
T 1a5z_A           64 DLKGSDVVIVAAGVPQ---KPGETRLQLLGRNARVMKEIARNVSKYAPD-SIVIVV  115 (319)
T ss_dssp             GGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEC
T ss_pred             HhCCCCEEEEccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEEe
Confidence            4678999999888432   111234456778888889999988877533 244443

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.57  E-value=0.014  Score=46.17  Aligned_cols=84  Identities=11%  Similarity=0.171  Sum_probs=57.5

Q ss_pred             CCeEEEEcCC---CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           23 KLRISSIGVG---GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        23 ~~~vlItGat---G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ..+|.|+|++   |.+|..+++.|.+.|++         |+.++.....   .         ..+.-..++.++...+|.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~---------v~~Vnp~~~~---i---------~G~~~y~sl~~l~~~vDl   80 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYD---------VYPVNPKYEE---V---------LGRKCYPSVLDIPDKIEV   80 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCE---------EEEECTTCSE---E---------TTEECBSSGGGCSSCCSE
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCE---------EEEECCCCCe---E---------CCeeccCCHHHcCCCCCE
Confidence            5789999998   89999999999999998         8888643211   0         111112233444457898


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      ++-+..                   ......+++.+.+.+++  .+++.
T Consensus        81 vvi~vp-------------------~~~~~~vv~~~~~~gi~--~i~~~  108 (144)
T 2d59_A           81 VDLFVK-------------------PKLTMEYVEQAIKKGAK--VVWFQ  108 (144)
T ss_dssp             EEECSC-------------------HHHHHHHHHHHHHHTCS--EEEEC
T ss_pred             EEEEeC-------------------HHHHHHHHHHHHHcCCC--EEEEC
Confidence            886654                   34556677888888987  66543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.57  E-value=0.0021  Score=61.06  Aligned_cols=75  Identities=8%  Similarity=-0.065  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEE-Ec---cCCC-----------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFH-LV---DLRV-----------   86 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~-~~---D~~~-----------   86 (366)
                      .+.+|||+||+|-||...++.+...|.+         |++++++..+.......+...+ ..   |+.+           
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~---------vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~  290 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGI---------PVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVE  290 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccch
Confidence            5678999999999999999998889999         9988876554332223333322 11   1110           


Q ss_pred             -----hhHHHhhh-cCCCEEEEccc
Q 044498           87 -----MDNCLRMT-SGVDNMSNLAA  105 (366)
Q Consensus        87 -----~~~l~~~~-~~~d~vi~~a~  105 (366)
                           .+.+.+.. .++|+||+++|
T Consensus       291 ~~~~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          291 TGRKLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHHHHHSSCCSEEEECSC
T ss_pred             hhhHHHHHHHHHhCCCceEEEECCC
Confidence                 12233333 36999999998

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.56  E-value=0.0041  Score=55.28  Aligned_cols=65  Identities=12%  Similarity=0.052  Sum_probs=47.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |+|.|+| .|.+|..+++.|.+.|++         |++++|++.........++..       ..++.++++++|+||-+
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~---------V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~~aDvvi~~   64 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCS---------VTIWNRSPEKAEELAALGAER-------AATPCEVVESCPVTFAM   64 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCe---------EEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEE
Confidence            6899999 599999999999999999         999999876543332222221       12344556678999876


Q ss_pred             cc
Q 044498          104 AA  105 (366)
Q Consensus       104 a~  105 (366)
                      ..
T Consensus        65 vp   66 (287)
T 3pef_A           65 LA   66 (287)
T ss_dssp             CS
T ss_pred             cC
Confidence            55

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.54  E-value=0.0028  Score=58.02  Aligned_cols=74  Identities=11%  Similarity=-0.014  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC--hhHHHhhh-cCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV--MDNCLRMT-SGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~--~~~l~~~~-~~~d   98 (366)
                      ...+|||+||+|-||...++.+...|.+         |+++++++.+.......+...+. |..+  .+.+.+.- .++|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~---------Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~g~D  219 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLR---------VITTASRNETIEWTKKMGADIVL-NHKESLLNQFKTQGIELVD  219 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEECCSHHHHHHHHHHTCSEEE-CTTSCHHHHHHHHTCCCEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHhcCCcEEE-ECCccHHHHHHHhCCCCcc
Confidence            4578999999999999999988889999         99999866543333333444332 3222  12233331 2699


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||++++
T Consensus       220 vv~d~~g  226 (346)
T 3fbg_A          220 YVFCTFN  226 (346)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999988

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.54  E-value=0.0029  Score=55.89  Aligned_cols=69  Identities=12%  Similarity=0.020  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ..++++|+|+ |-+|+.++..|.+.|. +         |++++|...+...... .+..     ...+++.+.+.++|+|
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~---------v~v~~R~~~~a~~la~-~~~~-----~~~~~~~~~~~~aDiV  179 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPT---------LTVANRTMSRFNNWSL-NINK-----INLSHAESHLDEFDII  179 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSC---------CEEECSCGGGGTTCCS-CCEE-----ECHHHHHHTGGGCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCE---------EEEEeCCHHHHHHHHH-hccc-----ccHhhHHHHhcCCCEE
Confidence            5678999996 8999999999999998 7         9999988765433221 1111     1345566677899999


Q ss_pred             EEcccc
Q 044498          101 SNLAAD  106 (366)
Q Consensus       101 i~~a~~  106 (366)
                      |++...
T Consensus       180 InaTp~  185 (277)
T 3don_A          180 INTTPA  185 (277)
T ss_dssp             EECCC-
T ss_pred             EECccC
Confidence            999764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.54  E-value=0.0018  Score=61.71  Aligned_cols=74  Identities=11%  Similarity=-0.020  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC-------------h-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV-------------M-   87 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~-------------~-   87 (366)
                      .+.+|||+||+|-||...++.+...|.+         |+++++++.+.......++..+. |..+             . 
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~---------vi~~~~~~~~~~~~~~lGa~~vi-~~~~~d~~~~~~~~~~~~~  297 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGAN---------PICVVSSPQKAEICRAMGAEAII-DRNAEGYRFWKDENTQDPK  297 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHTCCEEE-ETTTTTCCSEEETTEECHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCe---------EEEEECCHHHHHHHHhhCCcEEE-ecCcCcccccccccccchH
Confidence            5678999999999999999988889999         99888765543333333444321 2222             1 


Q ss_pred             ------hHHHhhh--cCCCEEEEccc
Q 044498           88 ------DNCLRMT--SGVDNMSNLAA  105 (366)
Q Consensus        88 ------~~l~~~~--~~~d~vi~~a~  105 (366)
                            +.+.++.  .++|+||.++|
T Consensus       298 ~~~~~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          298 EWKRFGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEcCC
Confidence                  3344433  37999999988

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=96.54  E-value=0.0049  Score=54.66  Aligned_cols=64  Identities=11%  Similarity=-0.007  Sum_probs=45.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ||+|.|+| .|.+|..++..|.+ |++         |++++|++.........++...  +      +.+++.++|+||-
T Consensus         1 M~~i~iiG-~G~~G~~~a~~l~~-g~~---------V~~~~~~~~~~~~~~~~g~~~~--~------~~~~~~~~D~vi~   61 (289)
T 2cvz_A            1 MEKVAFIG-LGAMGYPMAGHLAR-RFP---------TLVWNRTFEKALRHQEEFGSEA--V------PLERVAEARVIFT   61 (289)
T ss_dssp             -CCEEEEC-CSTTHHHHHHHHHT-TSC---------EEEECSSTHHHHHHHHHHCCEE--C------CGGGGGGCSEEEE
T ss_pred             CCeEEEEc-ccHHHHHHHHHHhC-CCe---------EEEEeCCHHHHHHHHHCCCccc--C------HHHHHhCCCEEEE
Confidence            46899998 59999999999999 999         9999987654332222222321  1      2234568999997


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        62 ~v~   64 (289)
T 2cvz_A           62 CLP   64 (289)
T ss_dssp             CCS
T ss_pred             eCC
Confidence            766

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.52  E-value=0.0021  Score=58.19  Aligned_cols=35  Identities=26%  Similarity=0.134  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~   66 (366)
                      ++|+|.|+| .|.+|..++..|.+.| ++         |++++|++
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~---------V~~~dr~~   58 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAAR---------LAAYDLRF   58 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSE---------EEEECGGG
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCe---------EEEEeCCC
Confidence            568999999 6999999999999999 99         99999876

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.50  E-value=0.0027  Score=58.51  Aligned_cols=75  Identities=9%  Similarity=-0.057  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccC-----------------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL-----------------   84 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~-----------------   84 (366)
                      ...+|+|+|+ |-+|...++.+...|.+         |++++++..+.......+..++..++                 
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~---------V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~  252 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAK---------TTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAER  252 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCE---------EEEECSSGGGHHHHHHTTCEECCCC-------------CHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHH
Confidence            4579999997 99999999999999999         99999987654433334445554321                 


Q ss_pred             -CChhHHHhhhcCCCEEEEcccc
Q 044498           85 -RVMDNCLRMTSGVDNMSNLAAD  106 (366)
Q Consensus        85 -~~~~~l~~~~~~~d~vi~~a~~  106 (366)
                       .+.+.+.+.++++|+||.++..
T Consensus       253 ~~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          253 AQQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHHTTCSEEEECCCC
T ss_pred             hhhHHHHHHHHhcCCEEEECCCC
Confidence             1234577778899999988753

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.49  E-value=0.0025  Score=56.68  Aligned_cols=66  Identities=11%  Similarity=0.016  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ||+|.|+| .|.+|..++..|.+.|++         |++++|++.........++..       ..++.++++++|+||-
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~---------V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~~advvi~   63 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFD---------VTVWNRNPAKCAPLVALGARQ-------ASSPAEVCAACDITIA   63 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCC---------EEEECSSGGGGHHHHHHTCEE-------CSCHHHHHHHCSEEEE
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCe---------EEEEcCCHHHHHHHHHCCCee-------cCCHHHHHHcCCEEEE
Confidence            57899998 699999999999999999         999999876543332222221       1224445567898887


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        64 ~v~   66 (287)
T 3pdu_A           64 MLA   66 (287)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            765

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.48  E-value=0.0034  Score=57.34  Aligned_cols=72  Identities=21%  Similarity=0.166  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh-cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT-SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~-~~   96 (366)
                      ...+|||+|| |-+|..+++.+...|. +         |+++++++.+....... ...+ .|..+.+   .+.++. .+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~---------Vi~~~~~~~~~~~~~~l-a~~v-~~~~~~~~~~~~~~~~~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGP---------ILVSDPNPYRLAFARPY-ADRL-VNPLEEDLLEVVRRVTGSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCS---------EEEECSCHHHHGGGTTT-CSEE-ECTTTSCHHHHHHHHHSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCE---------EEEECCCHHHHHHHHHh-HHhc-cCcCccCHHHHHHHhcCCC
Confidence            4578999999 9999999998888998 8         99999876543222222 2222 3444322   222221 36


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||+++|
T Consensus       232 ~D~vid~~g  240 (343)
T 2dq4_A          232 VEVLLEFSG  240 (343)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999988

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.46  E-value=0.0073  Score=53.39  Aligned_cols=68  Identities=13%  Similarity=0.049  Sum_probs=46.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc-CCCE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-GVDN   99 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-~~d~   99 (366)
                      ||+|.|+| .|.+|..++..|.+.|+  +         |++++|++.........++....  ..+   +.+.++ ++|+
T Consensus         1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~---------V~~~d~~~~~~~~~~~~g~~~~~--~~~---~~~~~~~~aDv   65 (281)
T 2g5c_A            1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGK---------IYGYDINPESISKAVDLGIIDEG--TTS---IAKVEDFSPDF   65 (281)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSE---------EEEECSCHHHHHHHHHTTSCSEE--ESC---GGGGGGTCCSE
T ss_pred             CcEEEEEe-cCHHHHHHHHHHHhcCCCcE---------EEEEeCCHHHHHHHHHCCCcccc--cCC---HHHHhcCCCCE
Confidence            47899999 69999999999999998  7         99998876433222112221000  112   334567 8999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||-+..
T Consensus        66 Vilavp   71 (281)
T 2g5c_A           66 VMLSSP   71 (281)
T ss_dssp             EEECSC
T ss_pred             EEEcCC
Confidence            997766

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.45  E-value=0.0042  Score=56.02  Aligned_cols=67  Identities=16%  Similarity=0.128  Sum_probs=44.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCC--ccccccccccceEEEccCCChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNK--NEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~--~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      .||+|.|+| .|.+|..++..|.+.|+ +         |++++|++  .........++..       ..++.++++++|
T Consensus        23 ~~~~I~iIG-~G~mG~~~A~~L~~~G~~~---------V~~~dr~~~~~~~~~~~~~g~~~-------~~~~~e~~~~aD   85 (312)
T 3qsg_A           23 NAMKLGFIG-FGEAASAIASGLRQAGAID---------MAAYDAASAESWRPRAEELGVSC-------KASVAEVAGECD   85 (312)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHHSCCE---------EEEECSSCHHHHHHHHHHTTCEE-------CSCHHHHHHHCS
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCCe---------EEEEcCCCCHHHHHHHHHCCCEE-------eCCHHHHHhcCC
Confidence            568999999 59999999999999999 8         99999973  2211111122221       122344556789


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||-+..
T Consensus        86 vVi~~vp   92 (312)
T 3qsg_A           86 VIFSLVT   92 (312)
T ss_dssp             EEEECSC
T ss_pred             EEEEecC
Confidence            9987765

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.45  E-value=0.02  Score=56.00  Aligned_cols=68  Identities=16%  Similarity=0.019  Sum_probs=58.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi~  102 (366)
                      ++|+|+|+ |-+|+++++.|.+.|++         |++++.++.......    .++.+|-++.+.+.++ ++++|.+|-
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~---------v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~  414 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVP---------FILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIV  414 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCC---------EEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEE
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCC---------EEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEE
Confidence            78999996 99999999999999999         999998876544332    8999999999998886 578999996


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +.+
T Consensus       415 ~~~  417 (565)
T 4gx0_A          415 TTN  417 (565)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            555

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.43  E-value=0.013  Score=52.36  Aligned_cols=95  Identities=14%  Similarity=0.034  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-------------cccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-------------MFCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-------------~~~v~~~~~D~~~~~   88 (366)
                      .|+||.++| .|..|..+++.|++.||+         |++++|++.+.....             ....+++..-+.+.+
T Consensus         2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~---------v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~   71 (300)
T 3obb_A            2 HMKQIAFIG-LGHMGAPMATNLLKAGYL---------LNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQ   71 (300)
T ss_dssp             -CCEEEEEC-CSTTHHHHHHHHHHTTCE---------EEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHH
T ss_pred             CcCEEEEee-ehHHHHHHHHHHHhCCCe---------EEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchH
Confidence            467999999 799999999999999999         999999865432211             112356666666666


Q ss_pred             HHHhhhcC----------CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEE
Q 044498           89 NCLRMTSG----------VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFF  146 (366)
Q Consensus        89 ~l~~~~~~----------~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I  146 (366)
                      .++.++.+          -.+||.+...                 ....+..+.+.+.+.++   +||
T Consensus        72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~-----------------~p~~~~~~a~~~~~~G~---~~l  119 (300)
T 3obb_A           72 HVEGLYLDDDGLLAHIAPGTLVLECSTI-----------------APTSARKIHAAARERGL---AML  119 (300)
T ss_dssp             HHHHHHHSSSSSTTSCCC-CEEEECSCC-----------------CHHHHHHHHHHHHTTTC---EEE
T ss_pred             HHHHHHhchhhhhhcCCCCCEEEECCCC-----------------CHHHHHHHHHHHHHcCC---EEE
Confidence            66655422          2455555442                 25567778888888877   466

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.42  E-value=0.0039  Score=56.23  Aligned_cols=71  Identities=14%  Similarity=0.045  Sum_probs=48.5

Q ss_pred             CCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCC
Q 044498           18 HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      .++..+|+|.|+| .|.+|+.++..|.+.|++         |++++|++.........++..    ..+   ..++++++
T Consensus        25 ~~~~~~~~I~iIG-~G~mG~~~a~~l~~~g~~---------V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~   87 (316)
T 2uyy_A           25 SITPTDKKIGFLG-LGLMGSGIVSNLLKMGHT---------VTVWNRTAEKCDLFIQEGARL----GRT---PAEVVSTC   87 (316)
T ss_dssp             CCCCCSSCEEEEC-CSHHHHHHHHHHHHTTCC---------EEEECSSGGGGHHHHHTTCEE----CSC---HHHHHHHC
T ss_pred             CCCCCCCeEEEEc-ccHHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHcCCEE----cCC---HHHHHhcC
Confidence            3333457899999 599999999999999999         999998765433222222221    112   33445678


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||-+..
T Consensus        88 DvVi~av~   95 (316)
T 2uyy_A           88 DITFACVS   95 (316)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeCC
Confidence            99987765

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.41  E-value=0.0022  Score=57.38  Aligned_cols=68  Identities=15%  Similarity=0.047  Sum_probs=46.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ..+|+|.|+| .|.+|..++..|.+.|++         |++++|++.........++..    ..+   ..++++++|+|
T Consensus         2 ~~~~~i~iiG-~G~~G~~~a~~l~~~g~~---------V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~v   64 (301)
T 3cky_A            2 EKSIKIGFIG-LGAMGKPMAINLLKEGVT---------VYAFDLMEANVAAVVAQGAQA----CEN---NQKVAAASDII   64 (301)
T ss_dssp             --CCEEEEEC-CCTTHHHHHHHHHHTTCE---------EEEECSSHHHHHHHHTTTCEE----CSS---HHHHHHHCSEE
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEE
Confidence            3567999999 699999999999999999         999988765332222112221    122   33445678999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-+..
T Consensus        65 i~~vp   69 (301)
T 3cky_A           65 FTSLP   69 (301)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            97764

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.39  E-value=0.0057  Score=54.96  Aligned_cols=77  Identities=12%  Similarity=0.000  Sum_probs=53.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCc---ccccc-----ccccceEEEccCCChhHHH
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKN---EHMME-----DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~---~~~~~-----~~~~v~~~~~D~~~~~~l~   91 (366)
                      ...++++|+|+ |-+|+.++..|.+.|. +         |++++|...   +....     ...+..+...++.+.+.+.
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~---------v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~  215 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKE---------IKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFT  215 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCE---------EEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhH
Confidence            36789999997 8999999999999997 6         999998833   22111     0112233444555544445


Q ss_pred             hhhcCCCEEEEccccc
Q 044498           92 RMTSGVDNMSNLAADM  107 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~  107 (366)
                      +.+.++|+||++....
T Consensus       216 ~~l~~~DiIINaTp~G  231 (312)
T 3t4e_A          216 EALASADILTNGTKVG  231 (312)
T ss_dssp             HHHHHCSEEEECSSTT
T ss_pred             hhccCceEEEECCcCC
Confidence            6677899999997743

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.38  E-value=0.0039  Score=57.31  Aligned_cols=79  Identities=13%  Similarity=0.048  Sum_probs=48.2

Q ss_pred             CCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc--c------ccceEEEccCCCh
Q 044498           16 ESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED--M------FCHEFHLVDLRVM   87 (366)
Q Consensus        16 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~--~------~~v~~~~~D~~~~   87 (366)
                      ...|.+++|+|.|+|+ |.+|..++..|.+.|++         |++++|++.......  .      .++.+ ...+.-.
T Consensus        22 ~~~m~~~~mkI~VIGa-G~mG~alA~~La~~G~~---------V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t   90 (356)
T 3k96_A           22 SNAMEPFKHPIAILGA-GSWGTALALVLARKGQK---------VRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAY   90 (356)
T ss_dssp             -----CCCSCEEEECC-SHHHHHHHHHHHTTTCC---------EEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEE
T ss_pred             hhcccccCCeEEEECc-cHHHHHHHHHHHHCCCe---------EEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEE
Confidence            3344445689999995 99999999999999999         999999754321110  0      11110 0011111


Q ss_pred             hHHHhhhcCCCEEEEccc
Q 044498           88 DNCLRMTSGVDNMSNLAA  105 (366)
Q Consensus        88 ~~l~~~~~~~d~vi~~a~  105 (366)
                      .++.++++++|+||-+..
T Consensus        91 ~d~~ea~~~aDvVilaVp  108 (356)
T 3k96_A           91 CDLKASLEGVTDILIVVP  108 (356)
T ss_dssp             SCHHHHHTTCCEEEECCC
T ss_pred             CCHHHHHhcCCEEEECCC
Confidence            235556788999996654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.38  E-value=0.0057  Score=56.78  Aligned_cols=76  Identities=12%  Similarity=-0.015  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccC----------------C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL----------------R   85 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~----------------~   85 (366)
                      ...+|+|+|+ |-+|...++.+...|.+         |+++++...+.......+..++..++                +
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~---------V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s  258 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAV---------VSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMS  258 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSTTHHHHHHHTTCEECCCCC-----------------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcc
Confidence            4579999997 99999999999999999         99999987654333323444443321                2


Q ss_pred             C------hhHHHhhhcCCCEEEEccccc
Q 044498           86 V------MDNCLRMTSGVDNMSNLAADM  107 (366)
Q Consensus        86 ~------~~~l~~~~~~~d~vi~~a~~~  107 (366)
                      +      .+.+.++++++|+||.++...
T Consensus       259 ~~~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          259 GEYQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             CHHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence            2      246777888999999987643

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.38  E-value=0.0042  Score=55.70  Aligned_cols=70  Identities=11%  Similarity=0.033  Sum_probs=51.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|+|+|+ |.||+.+++.|...|.+         |++++|...+.......++..+.     ...+.++++++|+||
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~---------V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~l~~aDvVi  220 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGAN---------VKVGARSSAHLARITEMGLVPFH-----TDELKEHVKDIDICI  220 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCEEEE-----GGGHHHHSTTCSEEE
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHCCCeEEc-----hhhHHHHhhCCCEEE
Confidence            6789999995 99999999999999999         99999876432211112333221     245677788999999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+...
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            88773

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.37  E-value=0.0096  Score=53.83  Aligned_cols=67  Identities=12%  Similarity=0.079  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+|+|.|+| .|.+|..+++.|.+.|++         |++++|++.........++..       ..++.++++++|+||
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~---------V~~~dr~~~~~~~l~~~g~~~-------~~~~~e~~~~aDvVi   92 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYA---------LQVWNRTPARAASLAALGATI-------HEQARAAARDADIVV   92 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHTTTCEE-------ESSHHHHHTTCSEEE
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCe---------EEEEcCCHHHHHHHHHCCCEe-------eCCHHHHHhcCCEEE
Confidence            567999998 599999999999999999         999998866433322222222       123555677899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus        93 ~~vp   96 (320)
T 4dll_A           93 SMLE   96 (320)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            7765

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.37  E-value=0.007  Score=55.47  Aligned_cols=73  Identities=7%  Similarity=-0.007  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC----hhHHHhhh---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV----MDNCLRMT---   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~----~~~l~~~~---   94 (366)
                      ...+|||+|+ |-+|...++.+...|.+         |+++++++.+.......++..+ .|..+    .+.+.+..   
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~---------Vi~~~~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAF---------VVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE---------EEEEcCCHHHHHHHHHhCCCEE-EcCcccccHHHHHHHHhccc
Confidence            4578999997 99999999988888999         9999887654333333344422 23332    23444443   


Q ss_pred             --cCCCEEEEccc
Q 044498           95 --SGVDNMSNLAA  105 (366)
Q Consensus        95 --~~~d~vi~~a~  105 (366)
                        .++|+||++++
T Consensus       237 ~g~g~D~vid~~g  249 (352)
T 1e3j_A          237 IGDLPNVTIDCSG  249 (352)
T ss_dssp             SSSCCSEEEECSC
T ss_pred             cCCCCCEEEECCC
Confidence              36999999988

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.34  E-value=0.0035  Score=57.74  Aligned_cols=74  Identities=11%  Similarity=-0.061  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh-hHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM-DNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~-~~l~~~~~~~d~v  100 (366)
                      ...+|||+|+ |-+|...++.+...|.+         |+++++++.+.......+...+ .|..+. +....+..++|+|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~---------Vi~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~~D~v  247 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAE---------TYVISRSSRKREDAMKMGADHY-IATLEEGDWGEKYFDTFDLI  247 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE---------EEEEESSSTTHHHHHHHTCSEE-EEGGGTSCHHHHSCSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEcCCHHHHHHHHHcCCCEE-EcCcCchHHHHHhhcCCCEE
Confidence            4578999999 99999999988888999         9999987665433333344433 344433 3333333589999


Q ss_pred             EEcccc
Q 044498          101 SNLAAD  106 (366)
Q Consensus       101 i~~a~~  106 (366)
                      |.+++.
T Consensus       248 id~~g~  253 (360)
T 1piw_A          248 VVCASS  253 (360)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.33  E-value=0.002  Score=59.48  Aligned_cols=71  Identities=8%  Similarity=0.063  Sum_probs=50.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC---ccccccccccceEEEccCCC--hhHHHhhhcCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK---NEHMMEDMFCHEFHLVDLRV--MDNCLRMTSGV   97 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~---~~~~~~~~~~v~~~~~D~~~--~~~l~~~~~~~   97 (366)
                      +.+|||+|| |.||..+++.+...|.+         |++++++.   .+.......++..+  | .+  .+.+.+.-.++
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~---------Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~  247 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLE---------VWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKF  247 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCE---------EEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCC
Confidence            679999999 99999999999889999         99999886   44322233445555  4 43  12233211479


Q ss_pred             CEEEEcccc
Q 044498           98 DNMSNLAAD  106 (366)
Q Consensus        98 d~vi~~a~~  106 (366)
                      |+||+++|.
T Consensus       248 d~vid~~g~  256 (366)
T 2cdc_A          248 DVIIDATGA  256 (366)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.31  E-value=0.01  Score=54.12  Aligned_cols=70  Identities=10%  Similarity=0.075  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh-HHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD-NCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~-~l~~~~~~~d~v  100 (366)
                      .+++|.|+| .|.+|..+++.|.+.|++         |++++|++.........++..    ..+.+ .+..+..++|+|
T Consensus         7 ~~~kIgIIG-~G~mG~slA~~L~~~G~~---------V~~~dr~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlV   72 (341)
T 3ktd_A            7 ISRPVCILG-LGLIGGSLLRDLHAANHS---------VFGYNRSRSGAKSAVDEGFDV----SADLEATLQRAAAEDALI   72 (341)
T ss_dssp             CSSCEEEEC-CSHHHHHHHHHHHHTTCC---------EEEECSCHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEE
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEE
Confidence            346899999 699999999999999999         999998865433222233321    12332 333345578999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-+..
T Consensus        73 ilavP   77 (341)
T 3ktd_A           73 VLAVP   77 (341)
T ss_dssp             EECSC
T ss_pred             EEeCC
Confidence            97765

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.30  E-value=0.015  Score=48.96  Aligned_cols=49  Identities=12%  Similarity=0.099  Sum_probs=40.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++|+|.|+| .|.+|+.++..|.+.|++         |++++|++.                         .++++|+||
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~---------V~~~~~~~~-------------------------~~~~aD~vi   62 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAGHE---------VTYYGSKDQ-------------------------ATTLGEIVI   62 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECTTCC-------------------------CSSCCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCE---------EEEEcCCHH-------------------------HhccCCEEE
Confidence            568999999 699999999999999999         999987643                         456899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus        63 ~av~   66 (209)
T 2raf_A           63 MAVP   66 (209)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            7665

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.30  E-value=0.0026  Score=56.83  Aligned_cols=66  Identities=14%  Similarity=0.140  Sum_probs=46.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      +|+|.|+| .|.+|..++..|.+.|++         |.+++|++.........++..    ..+   +.++++++|+||.
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~---------V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~   67 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGYS---------LVVSDRNPEAIADVIAAGAET----AST---AKAIAEQCDVIIT   67 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTCEE----CSS---HHHHHHHCSEEEE
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEE
Confidence            36999999 699999999999999999         999998765432222112221    122   3345567999997


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        68 ~v~   70 (299)
T 1vpd_A           68 MLP   70 (299)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            766

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.28  E-value=0.013  Score=51.85  Aligned_cols=67  Identities=13%  Similarity=0.027  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC---CCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH---YSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~---~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      ++|+|.|+|+ |.+|..++..|.+.|+   +         |++++|++........ .++...       .+..++++++
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~---------V~v~dr~~~~~~~l~~~~gi~~~-------~~~~~~~~~a   64 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNR---------ICVTNRSLDKLDFFKEKCGVHTT-------QDNRQGALNA   64 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGG---------EEEECSSSHHHHHHHHTTCCEEE-------SCHHHHHSSC
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCe---------EEEEeCCHHHHHHHHHHcCCEEe-------CChHHHHhcC
Confidence            4578999996 9999999999999998   7         9999988764332221 133221       1234456789


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||-+.-
T Consensus        65 DvVilav~   72 (280)
T 3tri_A           65 DVVVLAVK   72 (280)
T ss_dssp             SEEEECSC
T ss_pred             CeEEEEeC
Confidence            99997653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.28  E-value=0.026  Score=51.67  Aligned_cols=98  Identities=10%  Similarity=0.007  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------------------------ccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------------------------EDM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------------------------~~~   74 (366)
                      +..+|+|+|+ |-+|+++++.|...|...        ++++++..-....                           .+.
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~aGvg~--------i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~  187 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATSGIGE--------IILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE  187 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSE--------EEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhCCCCe--------EEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC
Confidence            3578999996 889999999999999641        8888765321100                           012


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHH-HHHHHHHHHHHcCCCceeEEEEec
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTT-ISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~-~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ..++.+..++++..++.. ++++|+||.+...                  .. ....+-++|.+.+++   +|+.+.
T Consensus       188 v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn------------------~~~~r~~ln~~c~~~~~p---~i~~~~  242 (353)
T 3h5n_A          188 ISVSEIALNINDYTDLHK-VPEADIWVVSADH------------------PFNLINWVNKYCVRANQP---YINAGY  242 (353)
T ss_dssp             SEEEEEECCCCSGGGGGG-SCCCSEEEECCCC------------------STTHHHHHHHHHHHTTCC---EEEEEE
T ss_pred             CeEEEeecccCchhhhhH-hccCCEEEEecCC------------------hHHHHHHHHHHHHHhCCC---EEEEEE
Confidence            234566667776655666 8899999986541                  12 223456788888886   777654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.28  E-value=0.0066  Score=56.41  Aligned_cols=74  Identities=18%  Similarity=0.120  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC----------------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR----------------   85 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~----------------   85 (366)
                      ..++|+|+|+ |-+|..+++.+...|.+         |++++++..+.......+..++..|..                
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~---------V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s  240 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAV---------VMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMG  240 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCSTTHHHHHHTTCEECCC-------------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcC
Confidence            5679999995 99999999999999999         999998876433222233343311221                


Q ss_pred             ------ChhHHHhhhcCCCEEEEccc
Q 044498           86 ------VMDNCLRMTSGVDNMSNLAA  105 (366)
Q Consensus        86 ------~~~~l~~~~~~~d~vi~~a~  105 (366)
                            ..+.+.+.+.++|+||+++.
T Consensus       241 ~~~~~~~~~~l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          241 EEFRKKQAEAVLKELVKTDIAITTAL  266 (384)
T ss_dssp             ----CCHHHHHHHHHTTCSEEEECCC
T ss_pred             HHHHhhhHHHHHHHhCCCCEEEECCc
Confidence                  12336677789999999884

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.27  E-value=0.0053  Score=56.74  Aligned_cols=74  Identities=12%  Similarity=0.070  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ...+|||+|+ |-+|...++.+...|.+         |+++++++.+.......+...+ .|..+.+.+.++..++|+||
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~---------Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~g~Dvvi  262 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAH---------VVAFTTSEAKREAAKALGADEV-VNSRNADEMAAHLKSFDFIL  262 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHTCSEE-EETTCHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHcCCcEE-eccccHHHHHHhhcCCCEEE
Confidence            4578999998 78999999988888999         9999987665433333444432 35555554555556899999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .++|.
T Consensus       263 d~~g~  267 (369)
T 1uuf_A          263 NTVAA  267 (369)
T ss_dssp             ECCSS
T ss_pred             ECCCC
Confidence            99883

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.25  E-value=0.0072  Score=54.18  Aligned_cols=107  Identities=8%  Similarity=0.046  Sum_probs=68.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----ccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----DMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .++||.|+|| |.+|..++..|+..|.  +         |..++.... ....    ......-+.+. .|   + +.++
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~e---------v~L~Di~~~-~~g~a~dl~~~~~~~i~~t-~d---~-~~l~   76 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADR---------LVLLDLSEG-TKGATMDLEIFNLPNVEIS-KD---L-SASA   76 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECCC------CHHHHHHHTCTTEEEE-SC---G-GGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEcCCcc-hHHHHHHHhhhcCCCeEEe-CC---H-HHHC
Confidence            4579999996 9999999999999987  7         999998764 1111    00000011110 22   2 3478


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ++|+||-.++.. .   ......+.+..|+...+.+++.+.+.... ..+|.+|
T Consensus        77 ~aD~Vi~aag~~-~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~s  125 (303)
T 2i6t_A           77 HSKVVIFTVNSL-G---SSQSYLDVVQSNVDMFRALVPALGHYSQH-SVLLVAS  125 (303)
T ss_dssp             TCSEEEECCCC--------CCHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEECS
T ss_pred             CCCEEEEcCCCC-C---CCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEcC
Confidence            999999999863 1   22345667888999999999999887644 2444444

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.25  E-value=0.0071  Score=55.96  Aligned_cols=73  Identities=10%  Similarity=0.022  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh--cCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT--SGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~--~~~d~   99 (366)
                      .+.+|||+||+|-||...++.+...|.+         |+++++. .+.......+...+ .|..+.+....+.  .++|+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~---------Vi~~~~~-~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~g~D~  251 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAH---------VTAVCSQ-DASELVRKLGADDV-IDYKSGSVEEQLKSLKPFDF  251 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECG-GGHHHHHHTTCSEE-EETTSSCHHHHHHTSCCBSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE---------EEEEeCh-HHHHHHHHcCCCEE-EECCchHHHHHHhhcCCCCE
Confidence            4678999999999999999988888998         9888743 32222223343432 2444433222222  47999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||+++|
T Consensus       252 vid~~g  257 (375)
T 2vn8_A          252 ILDNVG  257 (375)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.24  E-value=0.0058  Score=54.56  Aligned_cols=69  Identities=12%  Similarity=0.057  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|+|+| .|.||+.+++.|...|.+         |++++|...+.......++..+     +.+.+.++++++|+|+
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~---------V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi  218 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGAK---------VKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCI  218 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEE
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCE---------EEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEE
Confidence            578999999 599999999999999999         9999987653221112233332     1345667788999999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      .+..
T Consensus       219 ~~~p  222 (293)
T 3d4o_A          219 NTIP  222 (293)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8876

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.23  E-value=0.025  Score=50.82  Aligned_cols=104  Identities=9%  Similarity=0.014  Sum_probs=70.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCccccc----ccc-----ccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMM----EDM-----FCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~----~~~-----~~v~~~~~D~~~~~~l~~   92 (366)
                      |||.|+|| |.+|..++..|+..+  .+         |..++....+...    ...     ..+.+.. +  +    .+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~e---------l~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~   63 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVARE---------VVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YG   63 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCE---------EEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HH
Confidence            58999998 999999999998876  46         8899886532110    000     1122222 1  2    23


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                      .++++|+||..++...   .........+..|+.....+.+.+.+++.+ ..+|.+
T Consensus        64 a~~~aD~Vii~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~  115 (310)
T 2xxj_A           64 DLEGARAVVLAAGVAQ---RPGETRLQLLDRNAQVFAQVVPRVLEAAPE-AVLLVA  115 (310)
T ss_dssp             GGTTEEEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEC
T ss_pred             HhCCCCEEEECCCCCC---CCCcCHHHHHHhhHHHHHHHHHHHHHHCCC-cEEEEe
Confidence            4789999999998543   222344567888999999999999988654 245544

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.21  E-value=0.023  Score=55.90  Aligned_cols=102  Identities=12%  Similarity=-0.059  Sum_probs=65.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------------------------cccc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------------------------EDMF   75 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------------------------~~~~   75 (366)
                      ..+|+|+|+ |.+|+++++.|...|...        +++++...-....                           ....
T Consensus        17 ~s~VlVVGa-GGLGsevak~La~aGVG~--------ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v   87 (640)
T 1y8q_B           17 GGRVLVVGA-GGIGCELLKNLVLTGFSH--------IDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKA   87 (640)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCCE--------EEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTC
T ss_pred             cCeEEEECc-CHHHHHHHHHHHHcCCCe--------EEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCC
Confidence            468999996 889999999999999641        8887754311000                           0112


Q ss_pred             cceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           76 CHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        76 ~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      .+..+..++++.......++++|+||.+..                  |...-..+-++|..++++   +|+.++.+.+
T Consensus        88 ~V~a~~~~i~~~~~~~~~~~~~DlVvda~D------------------n~~aR~~ln~~c~~~~iP---lI~~g~~G~~  145 (640)
T 1y8q_B           88 NIVAYHDSIMNPDYNVEFFRQFILVMNALD------------------NRAARNHVNRMCLAADVP---LIESGTAGYL  145 (640)
T ss_dssp             EEEEEESCTTSTTSCHHHHTTCSEEEECCS------------------CHHHHHHHHHHHHHHTCC---EEEEEEETTE
T ss_pred             eEEEEecccchhhhhHhhhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEEEeccc
Confidence            344555666543322345678888887644                  355556677888888885   7877664433

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=96.21  E-value=0.013  Score=46.41  Aligned_cols=35  Identities=11%  Similarity=0.069  Sum_probs=31.2

Q ss_pred             CCeEEEEcCC---CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           23 KLRISSIGVG---GFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        23 ~~~vlItGat---G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      .++|.|+|++   |.+|..+++.|++.|++         |+.++...
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~---------v~~vnp~~   50 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYH---------VIPVSPKV   50 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCC---------EEEECSSS
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCE---------EEEeCCcc
Confidence            5679999998   89999999999999999         99987654

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.20  E-value=0.0062  Score=58.37  Aligned_cols=37  Identities=11%  Similarity=0.276  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      +||+|.|+| .|++|..++..|.+.  |++         |+++++++.+
T Consensus         8 ~~mkI~VIG-~G~vG~~~A~~La~~g~g~~---------V~~~D~~~~~   46 (481)
T 2o3j_A            8 KVSKVVCVG-AGYVGGPTCAMIAHKCPHIT---------VTVVDMNTAK   46 (481)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHHCTTSE---------EEEECSCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCCE---------EEEEECCHHH
Confidence            467999999 599999999999998  789         9999987654

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.19  E-value=0.016  Score=53.30  Aligned_cols=71  Identities=17%  Similarity=0.096  Sum_probs=51.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC-ChhHHHhhhcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR-VMDNCLRMTSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~-~~~~l~~~~~~~d~vi  101 (366)
                      |++|+|+|| |..|..+++.+.+.|++         |++++.++.........  +++..|.. +.+.+....+++|.|+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~---------vv~vd~~~~~~~~~~aD--~~~~~~~~~d~~~~~~~~~~~D~v~   68 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMK---------VVLVDKNPQALIRNYAD--EFYCFDVIKEPEKLLELSKRVDAVL   68 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCTTCTTTTTSS--EEEECCTTTCHHHHHHHHTSSSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeCCCCChhHhhCC--EEEECCCCcCHHHHHHHhcCCCEEE
Confidence            789999995 89999999999999999         99998765432221111  45566654 5666666667899988


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -..+
T Consensus        69 ~~~~   72 (363)
T 4ffl_A           69 PVNE   72 (363)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            5433

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=96.18  E-value=0.013  Score=55.23  Aligned_cols=72  Identities=17%  Similarity=0.106  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~   99 (366)
                      ++|+|||+|+ |.+|..+++.+.+.|++         |++++..+.......  .-..+..|+.|.+.+.++++  ++|.
T Consensus        18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~---------v~~v~~~~~~~~~~~--ad~~~~~~~~d~~~l~~~~~~~~~d~   85 (433)
T 2dwc_A           18 SAQKILLLGS-GELGKEIAIEAQRLGVE---------VVAVDRYANAPAMQV--AHRSYVGNMMDKDFLWSVVEREKPDA   85 (433)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHHTTCE---------EEEEESSTTCHHHHH--SSEEEESCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEECCCCChhhhh--cceEEECCCCCHHHHHHHHHHcCCCE
Confidence            5679999996 89999999999999999         999886654311111  11567788889888888764  8999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      |+....
T Consensus        86 V~~~~e   91 (433)
T 2dwc_A           86 IIPEIE   91 (433)
T ss_dssp             EEECSS
T ss_pred             EEECcc
Confidence            986443

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.17  E-value=0.02  Score=52.36  Aligned_cols=103  Identities=12%  Similarity=0.067  Sum_probs=66.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-------------------------ccc--cc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-------------------------MME--DM   74 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-------------------------~~~--~~   74 (366)
                      ...+|+|+|+ |-+|+++++.|...|...        ++++|...-..                         ...  +.
T Consensus        35 ~~~~VlivG~-GGlG~~ia~~La~~Gvg~--------itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~  105 (346)
T 1y8q_A           35 RASRVLLVGL-KGLGAEIAKNLILAGVKG--------LTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPM  105 (346)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSE--------EEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTT
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCE--------EEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCC
Confidence            3568999995 889999999999999741        77876432100                         000  11


Q ss_pred             ccceEEEccCCChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           75 FCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        75 ~~v~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      ..++.+..++.+  .....++++|+||.+..                  |......+-++|.+.++   .+|..++.+.+
T Consensus       106 v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d------------------~~~~r~~ln~~~~~~~i---p~i~~~~~G~~  162 (346)
T 1y8q_A          106 VDVKVDTEDIEK--KPESFFTQFDAVCLTCC------------------SRDVIVKVDQICHKNSI---KFFTGDVFGYH  162 (346)
T ss_dssp             SEEEEECSCGGG--CCHHHHTTCSEEEEESC------------------CHHHHHHHHHHHHHTTC---EEEEEEEEBTE
T ss_pred             eEEEEEecccCc--chHHHhcCCCEEEEcCC------------------CHHHHHHHHHHHHHcCC---CEEEEeecccE
Confidence            123444444433  23455678999996643                  24455567888888887   48888776666


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       163 G~  164 (346)
T 1y8q_A          163 GY  164 (346)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=96.17  E-value=0.0099  Score=53.79  Aligned_cols=67  Identities=13%  Similarity=0.103  Sum_probs=45.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC----CCCCCCCCccEEEEEeCCCc--cccccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER----HYSTSIPNALYIIASDWNKN--EHMMEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g----~~~~~~~~~~~V~~~~r~~~--~~~~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|+|.|+|+ |.+|..++..|.+.|    ++         |++++|++.  ........++.+.    .+   ..++++
T Consensus        21 ~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~---------V~v~~r~~~~~~~~~l~~~G~~~~----~~---~~e~~~   83 (322)
T 2izz_A           21 QSMSVGFIGA-GQLAFALAKGFTAAGVLAAHK---------IMASSPDMDLATVSALRKMGVKLT----PH---NKETVQ   83 (322)
T ss_dssp             -CCCEEEESC-SHHHHHHHHHHHHTTSSCGGG---------EEEECSCTTSHHHHHHHHHTCEEE----SC---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCCcce---------EEEECCCccHHHHHHHHHcCCEEe----CC---hHHHhc
Confidence            5578999995 999999999999999    78         999998864  2222222233321    12   233456


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||-+..
T Consensus        84 ~aDvVilav~   93 (322)
T 2izz_A           84 HSDVLFLAVK   93 (322)
T ss_dssp             HCSEEEECSC
T ss_pred             cCCEEEEEeC
Confidence            7888886654

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=96.16  E-value=0.035  Score=49.23  Aligned_cols=89  Identities=12%  Similarity=0.099  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEE-EEeCCCccccccccccceEEEccCCChhHHHhhhc--CCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYII-ASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~-~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d   98 (366)
                      +.++|+|.|+||..|+.+++.|.+.|++         ++ .++...... .  ..++..       ...+.++.+  .+|
T Consensus         6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~---------~v~~VnP~~~g~-~--i~G~~v-------y~sl~el~~~~~~D   66 (288)
T 1oi7_A            6 RETRVLVQGITGREGQFHTKQMLTYGTK---------IVAGVTPGKGGM-E--VLGVPV-------YDTVKEAVAHHEVD   66 (288)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCE---------EEEEECTTCTTC-E--ETTEEE-------ESSHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHcCCe---------EEEEECCCCCCc-e--ECCEEe-------eCCHHHHhhcCCCC
Confidence            5578999999999999999999998887         55 555432111 0  111121       222444444  789


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ++|-+..                   ......+++.|.+.+++  .+|.+++
T Consensus        67 v~Ii~vp-------------------~~~~~~~~~ea~~~Gi~--~vVi~t~   97 (288)
T 1oi7_A           67 ASIIFVP-------------------APAAADAALEAAHAGIP--LIVLITE   97 (288)
T ss_dssp             EEEECCC-------------------HHHHHHHHHHHHHTTCS--EEEECCS
T ss_pred             EEEEecC-------------------HHHHHHHHHHHHHCCCC--EEEEECC
Confidence            9987765                   34566778888888887  5666554

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.14  E-value=0.0019  Score=58.44  Aligned_cols=71  Identities=10%  Similarity=-0.011  Sum_probs=48.5

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-cCCCEEEEc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-SGVDNMSNL  103 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-~~~d~vi~~  103 (366)
                      +|||+||+|-+|...++.+...|.+         |+++++++.+.......+...+. |..+.+.+.++. .++|++|.+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~---------Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~d~v~d~  218 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQ---------VAAVSGRESTHGYLKSLGANRIL-SRDEFAESRPLEKQLWAGAIDT  218 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCC---------EEEEESCGGGHHHHHHHTCSEEE-EGGGSSCCCSSCCCCEEEEEES
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHhcCCCEEE-ecCCHHHHHhhcCCCccEEEEC
Confidence            4999999999999999988889999         99999876654433333434332 333322222221 268999998


Q ss_pred             cc
Q 044498          104 AA  105 (366)
Q Consensus       104 a~  105 (366)
                      +|
T Consensus       219 ~g  220 (324)
T 3nx4_A          219 VG  220 (324)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.13  E-value=0.0039  Score=56.06  Aligned_cols=67  Identities=10%  Similarity=0.003  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++|+|.|+| .|.+|..+++.|.+.|++         |++++|++.........++..       ..++.++++++|+||
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~---------V~~~dr~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVi   70 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKR---------VAIWNRSPGKAAALVAAGAHL-------CESVKAALSASPATI   70 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCC---------EEEECSSHHHHHHHHHHTCEE-------CSSHHHHHHHSSEEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEE
Confidence            467899998 699999999999999999         999998865433222222221       123445566789999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus        71 ~~vp   74 (306)
T 3l6d_A           71 FVLL   74 (306)
T ss_dssp             ECCS
T ss_pred             EEeC
Confidence            7765

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.13  E-value=0.0071  Score=54.20  Aligned_cols=68  Identities=13%  Similarity=-0.006  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ++|+|.|+| .|.+|..++..|.+.|++         |++++|++.........+...+..|      +.++++++|+||
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~---------V~~~dr~~~~~~~~~~~g~~~~~~~------~~e~~~~aDvvi   69 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLS---------TWGADLNPQACANLLAEGACGAAAS------AREFAGVVDALV   69 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTCSEEESS------STTTTTTCSEEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCe---------EEEEECCHHHHHHHHHcCCccccCC------HHHHHhcCCEEE
Confidence            457999998 699999999999999999         9999988654332222222221222      233456788888


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      -+..
T Consensus        70 ~~vp   73 (303)
T 3g0o_A           70 ILVV   73 (303)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            6655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	366
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	9e-72
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-40
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-33
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-29
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-25
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	7e-24
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-23
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-22
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-20
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-20
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-18
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-17
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-17
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-16
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-15
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	5e-15
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-08
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-07
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	3e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	6e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	7e-04
d1h6da1	221	c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxid	0.003

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  225 bits (575), Expect = 9e-72
 Identities = 264/368 (71%), Positives = 297/368 (80%), Gaps = 29/368 (7%)

Query: 9   TYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE 68
           TY +LERE +WPS  L+IS  G GGFI S+IARRLK E HY         +IASDW KNE
Sbjct: 1   TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIASDWKKNE 51

Query: 69  HMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTIS 128
           HM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIMY NT IS
Sbjct: 52  HMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS 111

Query: 129 FDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD---VKESEAWPAEPQDAYGLEKLAT 185
           F+M+EAAR+NG+    FF+ SSACIYPEFKQL+T    +KES+AWPAEPQDA+GLEKLAT
Sbjct: 112 FNMIEAARINGIKR--FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLAT 169

Query: 186 EGLCKHYTKDFEIECRLV---------------GEKAPAAFSRKAVTSTDNFEMWGDGKQ 230
           E LCKHY KDF IECR+                 EKAPAAF RKA TSTD FEMWGDG Q
Sbjct: 170 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ 229

Query: 231 TRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE 290
           TRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPIH IPGPE
Sbjct: 230 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE 289

Query: 291 GVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVAT 350
           GVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YGSS VV T
Sbjct: 290 GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGT 349

Query: 351 QAPVQLGS 358
           QAPVQLGS
Sbjct: 350 QAPVQLGS 357

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 1e-40
 Identities = 63/323 (19%), Positives = 126/323 (39%), Gaps = 29/323 (8%)

Query: 23  KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLV 82
           + RI   G  GF+ S++  +L  + H  T + N  +      N    +            
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDN--FFTGRKRNVEHWI-------GHENF 51

Query: 83  DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS 142
           +L   D    +   VD + +LA+      ++ +    +   NT  + +ML  A+  G   
Sbjct: 52  ELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTL-KTNTIGTLNMLGLAKRVGA-- 108

Query: 143 LTFFFVSSACIYPEFKQLDTDVKE-SEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
                 S++ +Y + +             P  P+  Y   K   E +C  Y K   +E R
Sbjct: 109 -RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 167

Query: 202 LV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
           +                +  + F  +A+   +   ++G G QTR+  ++ + V G++ L+
Sbjct: 168 VARIFNTFGPRMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 226

Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
            S+   P+N+G+ E  +I E A++I +       I  +    +  + R  D       LG
Sbjct: 227 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 286

Query: 308 WAPTMKQKDELRITYFWIKEQVE 330
           W P +  ++ L     + ++++E
Sbjct: 287 WEPVVPLEEGLNKAIHYFRKELE 309

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  123 bits (310), Expect = 4e-33
 Identities = 60/315 (19%), Positives = 105/315 (33%), Gaps = 25/315 (7%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCH---EFHLVDLRV 86
           G  GFI S+  R+L +  +        + + +  +  N   +  +       F   D+R 
Sbjct: 7   GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66

Query: 87  MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFF 146
                R   GVD +    A    +    +  SV    N   +  +L+ A   GV      
Sbjct: 67  AGLLARELRGVDAI-VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG--RVV 123

Query: 147 FVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV--- 203
            VS+  +Y             E+ P EP   Y   K  ++ + + Y + + ++ R+    
Sbjct: 124 HVSTNQVYGSIDSGSWT----ESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCC 179

Query: 204 --------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR-E 254
                    EK    F    +       ++GDG   R     D+   G+  ++      E
Sbjct: 180 NNYGPYQHPEKLIPLFVTNLLDG-GTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGE 238

Query: 255 PLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG--PEGVRGRNSDDTLINEELGWAPTM 312
             +IG    ++  E+  I+L                       + D   I  ELG+ P +
Sbjct: 239 IYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQV 298

Query: 313 KQKDELRITYFWIKE 327
              D L  T  W +E
Sbjct: 299 SFADGLARTVRWYRE 313

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  112 bits (281), Expect = 9e-29
 Identities = 55/334 (16%), Positives = 109/334 (32%), Gaps = 40/334 (11%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GFI S + R +      +    + L    +  + ++    + +   F   D+     
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRY--NFEHADICDSAE 64

Query: 90  CLRMTSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM------ 141
             R+      D + +LAA+   +    +  +  +  N   ++ +LE AR           
Sbjct: 65  ITRIFEQYQPDAVMHLAAE-SHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKK 123

Query: 142 -SLTFFFVSSACIY------PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK 194
            +  F  +S+  +Y       E +   T    +E     P   Y   K +++ L + + +
Sbjct: 124 NNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRR 183

Query: 195 DFEIECRLV-----------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG 243
            + +   +             EK        A+       ++G G Q R   ++++    
Sbjct: 184 TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG-KPLPIYGKGDQIRDWLYVEDHARA 242

Query: 244 VLRLIKSDFR-EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG---------PEGVR 293
           +  ++      E  NIG        ++   I    +E +P               P   R
Sbjct: 243 LHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDR 302

Query: 294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
               D   I+ ELGW P    +  +R T  W   
Sbjct: 303 RYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  102 bits (255), Expect = 2e-25
 Identities = 65/336 (19%), Positives = 118/336 (35%), Gaps = 55/336 (16%)

Query: 23  KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLV 82
           K R+   G  G + S I R+L+        +                        E +L+
Sbjct: 2   KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR--------------------DELNLL 41

Query: 83  DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS 142
           D R + +    +  +D +   AA +GG+    +  +  +Y+N  I  +++ AA  N V  
Sbjct: 42  DSRAVHDFFA-SERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN- 99

Query: 143 LTFFFVSSACIYPEFKQLDTDVKESEAWPAE-PQDAYGLEKLATEGLCKHYTKDFEIECR 201
               F+ S+CIYP+  +      E      E   + Y + K+A   LC+ Y + +  + R
Sbjct: 100 -KLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYR 158

Query: 202 LV-------------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE 242
            V                          F         +  +WG G   R    +D+   
Sbjct: 159 SVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 218

Query: 243 GVLRLIKSDFR----------EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-PEG 291
             + +++                +N+G+    +I E+A+ I      K  +      P+G
Sbjct: 219 ASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDG 278

Query: 292 VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
              +  D T +  +LGW   +  +  L  TY W  E
Sbjct: 279 TPRKLLDVTRL-HQLGWYHEISLEAGLASTYQWFLE 313

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 98.7 bits (245), Expect = 7e-24
 Identities = 58/356 (16%), Positives = 109/356 (30%), Gaps = 60/356 (16%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCH----EFHLVDLR 85
           GV G   S +A  L  + +    I       + +  + +H+ +D          H  DL 
Sbjct: 8   GVTGQDGSYLAEFLLEKGYEVHGIKRRAS--SFNTERVDHIYQDPHTCNPKFHLHYGDLS 65

Query: 86  VMDNCLRMTSG--VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
              N  R+      D + NL A M  +     +       +   +  +LEA R  G+   
Sbjct: 66  DTSNLTRILREVQPDEVYNLGA-MSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 124

Query: 144 T-FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC-- 200
           T F+  S++ +Y   +++       E  P  P+  Y + KL    +  +Y + + +    
Sbjct: 125 TRFYQASTSELYGLVQEIPQK----ETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 180

Query: 201 ---------RLVGEKAPAAFSRKAVTSTDNFEM---WGDGKQTRSLTFIDECVEGVLRLI 248
                    R          +R         E     G+    R      + V+    ++
Sbjct: 181 GILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240

Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-------------------- 288
           + +  E   I +    S+ +  E+  +    KL                           
Sbjct: 241 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 300

Query: 289 ------------PEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKE 332
                       P  V     D T  +E+LGW P +  ++ +        E  +K 
Sbjct: 301 DVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKH 356

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 97.8 bits (242), Expect = 2e-23
 Identities = 54/338 (15%), Positives = 100/338 (29%), Gaps = 45/338 (13%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  G+I S+    L    +      N          + E + +      F+ VDL     
Sbjct: 8   GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI--PFYEVDLCDRKG 65

Query: 90  CLRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
             ++     +D++ + A  +  +G          + N   +  +LE  +   V    F F
Sbjct: 66  LEKVFKEYKIDSVIHFAG-LKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS--KFVF 122

Query: 148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG--- 204
            SSA +Y +  +    +   E  P  P + YG  K A E +        +   +      
Sbjct: 123 SSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 205 --------------------EKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV 244
                                      ++ AV   +   ++GD   +R  T I + +  V
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV 242

Query: 245 LRLIKSDFREP--------------LNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE 290
                                     N+GS +  ++ E+           LP        
Sbjct: 243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRA 302

Query: 291 G-VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
           G V    +       EL W   ++ +D  +  + W  E
Sbjct: 303 GDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 340

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 93.5 bits (231), Expect = 5e-22
 Identities = 56/324 (17%), Positives = 106/324 (32%), Gaps = 34/324 (10%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPN--ALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM 87
           GV GFI SN+   L         + N    +    D  ++    +     +F   D+R +
Sbjct: 23  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82

Query: 88  DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
           D+C    +GVD + + A  +G +    ++       N     +ML AAR   V   +F +
Sbjct: 83  DDCNNACAGVDYVLHQA-ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQ--SFTY 139

Query: 148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC------- 200
            +S+  Y +   L       E    +P   Y + K   E     +++ +           
Sbjct: 140 AASSSTYGDHPGLPKV----EDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFN 195

Query: 201 --------RLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG---VLRLIK 249
                             ++   +   D   + GDG+ +R   +I+  V+          
Sbjct: 196 VFGRRQDPNGAYAAVIPKWTSSMIQGDD-VYINGDGETSRDFCYIENTVQANLLAATAGL 254

Query: 250 SDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG------PEGVRGRNSDDTLIN 303
               +  NI      S+N++   +     E    +             VR   +D +   
Sbjct: 255 DARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAA 314

Query: 304 EELGWAPTMKQKDELRITYFWIKE 327
           + LG+AP       + +   W   
Sbjct: 315 KLLGYAPKYDVSAGVALAMPWYIM 338

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 87.8 bits (216), Expect = 4e-20
 Identities = 43/323 (13%), Positives = 89/323 (27%), Gaps = 28/323 (8%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G+ G   + +A+ L  + +    +            +   +  D+   ++   D+    +
Sbjct: 7   GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDI---QYEDGDMADACS 63

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYK-NTTISFDMLEAARMNGVMSLTFFFV 148
             R                       N  V     +      +LEA R     +  +   
Sbjct: 64  VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS 123

Query: 149 SSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV----- 203
           +S        +        E  P  P+  YG+ KL    +  +Y + F +          
Sbjct: 124 TSEMFGLIQAERQD-----ENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178

Query: 204 -GEKAPAAFSRKAVTST--------DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFRE 254
                   F  + VT                G+    R   F  + VE +  +++ D  +
Sbjct: 179 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKAD 238

Query: 255 PLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-----VRGRNSDDTLINEELGWA 309
              + +    ++ +M +I                P       V     +       LGW 
Sbjct: 239 DYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWK 298

Query: 310 PTMKQKDELRITYFWIKEQVEKE 332
           P     + +R+       +V +E
Sbjct: 299 PRTSLDELIRMMVEADLRRVSRE 321

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (215), Expect = 6e-20
 Identities = 50/347 (14%), Positives = 111/347 (31%), Gaps = 52/347 (14%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCH-----EFHLVDL 84
           G+ G   S +A  L  + +    I       + +  + EH+ ++   H     + H  DL
Sbjct: 8   GITGQDGSYLAEFLLEKGYEVHGIVRRSS--SFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 85  RVMDNCLRMTSGVDNMSNLAAD-MGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
                 +++ + V             +             +   +  +L+A +  G+++ 
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 144 T-FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRL 202
             F+  S++ +Y + +++       E  P  P+  YG  KL    +  ++ + + +    
Sbjct: 126 VKFYQASTSELYGKVQEIPQK----ETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 181

Query: 203 V--------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
                            +  +    K           G+    R      + VE +  ++
Sbjct: 182 GILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLML 241

Query: 249 KSDFREPLNIGSDEMVSINEMA-------------------EIILSFENEKLPIHPIPG- 288
           ++D  E   I + E+ S+ E                     E+    E  K+ +      
Sbjct: 242 QNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKY 301

Query: 289 --PEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEK 333
             P  V     D T   ++L W P +   + +R     +   VE  +
Sbjct: 302 YRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREM---VHADVELMR 345

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 81.9 bits (201), Expect = 4e-18
 Identities = 56/333 (16%), Positives = 104/333 (31%), Gaps = 43/333 (12%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  G+I S+   +L    H    + N      S     E +        F   D+R    
Sbjct: 7   GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHP--TFVEGDIRNEAL 64

Query: 90  C--LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF 147
              +     +D + + A  +  +G            N   +  ++ A R   V +  F F
Sbjct: 65  MTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN--FIF 121

Query: 148 VSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTK------------- 194
            SSA +Y +  +              PQ  YG  KL  E +     K             
Sbjct: 122 SSSATVYGDQPK---IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYF 178

Query: 195 ---------DFEIECRLVGEKAPAAFSRKAVTSTDNFEMWG------DGKQTRSLTFIDE 239
                    D   + + +        ++ AV   D+  ++G      DG   R    + +
Sbjct: 179 NPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238

Query: 240 CVEGVLRLIKSDFR----EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-VRG 294
             +G +  ++           N+G+    S+ ++         + +  H  P  EG +  
Sbjct: 239 LADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPA 298

Query: 295 RNSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
             +D +  + EL W  T    +  + T+ W   
Sbjct: 299 YWADASKADRELNWRVTRTLDEMAQDTWHWQSR 331

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 80.8 bits (198), Expect = 1e-17
 Identities = 58/325 (17%), Positives = 111/325 (34%), Gaps = 22/325 (6%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GFI SN    + +               A +    E ++ D    E  + D+   + 
Sbjct: 9   GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRV--ELVVGDIADAEL 66

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS 149
             ++ +  D + + AA+      +  + S  ++ N   ++ +LEAAR   +         
Sbjct: 67  VDKLAAKADAIVHYAAESHNDNSLN-DPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDE 125

Query: 150 SACIYP-----EFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG 204
                P              K +      P   Y   K A++ + K + + F ++  +  
Sbjct: 126 VYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISN 185

Query: 205 ----------EKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL-IKSDFR 253
                      +         + +    +++G+GK  R     ++   GV  +  K    
Sbjct: 186 CSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMG 245

Query: 254 EPLNIGSDEMVSINEMAEIILSFENE-KLPIHPIPGPEG-VRGRNSDDTLINEELGWAPT 311
           E   IG+D   +  E+ E+IL    + K     +    G       D + + +ELGW P 
Sbjct: 246 ETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQ 305

Query: 312 MKQKDE-LRITYFWIKEQVEKEKAQ 335
                E L  T  W  +  +  KA+
Sbjct: 306 FTDFSEGLEETIQWYTDNQDWWKAE 330

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 79.8 bits (195), Expect = 2e-17
 Identities = 53/339 (15%), Positives = 107/339 (31%), Gaps = 41/339 (12%)

Query: 25  RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL 84
           ++   G  GF+ SN+A    S+        N   +       N H +  +   EF   D+
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDN---LSRKGATDNLHWLSSLGNFEFVHGDI 58

Query: 85  RVMDNCLRMTSGVD-NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
           R  ++  R+ +    +     A    M     N  +    N   + ++LEA R       
Sbjct: 59  RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC- 117

Query: 144 TFFFVSSACIY------------PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKH 191
              + S+  +Y              +  +D      E+   +    YG  K A +     
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 192 YTKDFEIECRLVGEKAPAAFS------------------RKAVTSTDNFEMWGDGKQTRS 233
           Y + F +   +    +                                F + G+GKQ R 
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 234 LTFIDECVEGVLRLIKSD-----FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG 288
           +   ++ +      + +          +       +S+ E+ +++  + N  +    +P 
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV 297

Query: 289 PEG-VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK 326
            E   R   +D   I   + W+P +  KD ++  Y W  
Sbjct: 298 RESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTS 336

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 76.8 bits (187), Expect = 3e-16
 Identities = 44/365 (12%), Positives = 89/365 (24%), Gaps = 70/365 (19%)

Query: 30  GVGGFIPSNIARRLKSER------------------HYSTSIPNALYIIASDWNKNEHMM 71
           G  G+I S+  R L  +                   H  T    A  +  SD  K     
Sbjct: 9   GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWAD 68

Query: 72  EDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDM 131
                    + +   ++        +D + ++ A +     ++            I   +
Sbjct: 69  RYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLL 128

Query: 132 LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKH 191
                      +     +                        P+  YG  KL  E + + 
Sbjct: 129 QAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRD 188

Query: 192 YTKDFEIEC---------------------------------RLVGEKAP--------AA 210
             + + I+                                  R++ + AP         A
Sbjct: 189 CAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDA 248

Query: 211 FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR----------EPLNIGS 260
            + K +          DG   R    + +     +  +    +             N+G+
Sbjct: 249 STDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT 308

Query: 261 DEMVSINEMAEIILSFENEKLPIHPIPGPEG-VRGRNSDDTLINEELGWAPTMKQKDELR 319
               S+ E+ E+        +P+      EG      +      E LGW P     + + 
Sbjct: 309 SRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIM 368

Query: 320 ITYFW 324
            T + 
Sbjct: 369 ETSWK 373

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (183), Expect = 1e-15
 Identities = 51/332 (15%), Positives = 106/332 (31%), Gaps = 35/332 (10%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--MEDMFCHEFHLVDLRVM 87
           G  G+I S+    L    +    I N         +  E +  ++++        ++ ++
Sbjct: 9   GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68

Query: 88  DNCLRMTSGVDNMSN---LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLT 144
           D                   A +  +G            N T +  +LE  + +GV +L 
Sbjct: 69  DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128

Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG 204
           F   ++    P++  LD             +  + +E++  + LC+       +  R   
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRD-LCQADKTWNAVLLRYFN 187

Query: 205 EKAP------------------------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC 240
                                       A   R+A+    N     DG   R    + + 
Sbjct: 188 PTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL 247

Query: 241 VEGVLRLIKSDFR----EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEG-VRGR 295
            +G +  ++           N+G+    S+ +M + +     +K+P   +   EG V   
Sbjct: 248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAAC 307

Query: 296 NSDDTLINEELGWAPTMKQKDELRITYFWIKE 327
            ++ +L  EELGW   +         + W K+
Sbjct: 308 YANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 72.8 bits (177), Expect = 5e-15
 Identities = 44/327 (13%), Positives = 98/327 (29%), Gaps = 25/327 (7%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCH---EFHLVDLRV 86
           G+ G   S +   L  + +    +        +    + ++          + H  DL  
Sbjct: 8   GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67

Query: 87  MDNCLR-MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTF 145
             +  R +     +     A    +               T +  +LEA R + + S   
Sbjct: 68  ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127

Query: 146 FFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLV-- 203
                A     F        E+   P  P+  Y   K A      +Y + + +       
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSET--TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGIL 185

Query: 204 ----GEKAPAAFSRKAVTSTDNFEM--------WGDGKQTRSLTFIDECVEGVLRLIKSD 251
                 +    F  + +T                G+ + +R   F  + VE +  +++ +
Sbjct: 186 FNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE 245

Query: 252 FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-----PEGVRGRNSDDTLINEEL 306
             +   + ++E  ++ E  ++   +       +         P  V     D +   E L
Sbjct: 246 KPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVL 305

Query: 307 GWAPTMKQKDELRITYFWIKEQVEKEK 333
           GW P +  +  +++      E  ++EK
Sbjct: 306 GWKPQVGFEKLVKMMVDEDLELAKREK 332

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 52.3 bits (123), Expect = 4e-08
 Identities = 44/340 (12%), Positives = 96/340 (28%), Gaps = 46/340 (13%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           GV GFI +++  RL  E HY     +      S +  + H         F   D+ +   
Sbjct: 7   GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF-------HFVEGDISIHSE 59

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS 149
            +       ++      +        N   +   +   +  ++          +      
Sbjct: 60  WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSE 119

Query: 150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHY----------------- 192
              +  +    +           +P+  Y + K   + +   Y                 
Sbjct: 120 VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWM 179

Query: 193 -TKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
             +   +    +G           +      ++   GKQ R  T I + +E + R+I++ 
Sbjct: 180 GPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239

Query: 252 FREPLN-----IGSDEMVSINEMAEIILSFENEKLPIHPIP----------------GPE 290
                         +   SI E+ E++L+   +    H  P                G +
Sbjct: 240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQ 299

Query: 291 GVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVE 330
            V  R       +  L W P +  ++ +  T  +    V+
Sbjct: 300 DVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 49.4 bits (116), Expect = 3e-07
 Identities = 36/275 (13%), Positives = 74/275 (26%), Gaps = 32/275 (11%)

Query: 23  KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLV 82
           K R+  +G  G+I   I     S  H +  +     +   D  +     + +   +    
Sbjct: 3   KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEA 61

Query: 83  DLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS 142
            L      +     VD + +  A       I                 ++EA +  G + 
Sbjct: 62  SLDDHQRLVDALKQVDVVISALAGGVLSHHILEQL------------KLVEAIKEAGNI- 108

Query: 143 LTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC-- 200
              F  S   + P+                +P     ++K       +  +  +      
Sbjct: 109 -KRFLPSEFGMDPD----------IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSN 157

Query: 201 RLVGEKAP--AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDF---REP 255
              G  A   A      +   D   ++GDG         D+     ++ I       +  
Sbjct: 158 MFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTM 217

Query: 256 LNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE 290
                  ++S  E+ +I      + L    I   +
Sbjct: 218 YIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 252

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 49.3 bits (115), Expect = 3e-07
 Identities = 42/306 (13%), Positives = 89/306 (29%), Gaps = 15/306 (4%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GFI SNI + L  +      + + L     D  K  ++++          D  +   
Sbjct: 6   GGAGFIGSNIVKALNDKGITDILVVDNL----KDGTKFVNLVDLNIADYMDKEDFLIQIM 61

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS 149
                  V+ + +  A      +         Y+ +           +  + + +     
Sbjct: 62  AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG 121

Query: 150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPA 209
                    +          +     D Y  + L          + F +     G K   
Sbjct: 122 GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSM 181

Query: 210 AFSRKAVTSTDNFEMW-----GDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMV 264
           A     + +  N         G     R   ++ +  +  L  +++      N+G+    
Sbjct: 182 ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAE 241

Query: 265 SINEMAEIILSFENEKLPIHPIPGPEGVRGR-----NSDDTLINEELGWAPTMKQKDELR 319
           S   +A+  L++   K  I  IP P+ ++GR      +D T +       P     + + 
Sbjct: 242 SFQAVADATLAYHK-KGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT 300

Query: 320 ITYFWI 325
               W+
Sbjct: 301 EYMAWL 306

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 37/355 (10%), Positives = 83/355 (23%), Gaps = 61/355 (17%)

Query: 20  PSGKLRISSIGVGGFIPSNIARRLKSERH-------------------YSTSIPNALYII 60
           P G   +   G  GF+ S++  +L    +                    +         +
Sbjct: 9   PEGS-LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV 67

Query: 61  ASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVI 120
             D  K     E +           V+    +    V        +         +    
Sbjct: 68  VEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRF 127

Query: 121 MYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGL 180
           +  ++T+S  + +       +    + + S        + D         P +    Y  
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD---------PQKSLWVYAA 178

Query: 181 EKLATEGLCKHYTKDFEIECR------------LVGEKAPAAFSRKAVTSTDNFEMW--G 226
            K   E     +  + +                +   +  +  +   + S  N E+    
Sbjct: 179 SKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL 238

Query: 227 DGKQTRSLTFIDECVEGVLRLI-KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP 285
                +      +     L  +           G+      N +         +  P   
Sbjct: 239 ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATF----RKLYPSKT 294

Query: 286 IPGPEGVRGR------NSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKA 334
            P     +G+       +    I + LG       ++        IK+ V  E A
Sbjct: 295 FPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEE-------SIKDLVGSETA 342

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 6e-04
 Identities = 33/340 (9%), Positives = 70/340 (20%), Gaps = 36/340 (10%)

Query: 30  GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN 89
           G  GF    ++  L++          +L             + D    +  + D+R  + 
Sbjct: 15  GHTGFKGGWLSLWLQTMGATVKGY--SLTAPTVPSLFETARVADGM--QSEIGDIRDQNK 70

Query: 90  CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS 149
            L                  +  +  +  V  Y    +    L  A  +         ++
Sbjct: 71  LLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130

Query: 150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKA-- 207
           S   Y   + +    +       +P   Y   K   E +   Y   F             
Sbjct: 131 SDKCYDNKEWIWGYRENEAMGGYDP---YSNSKGCAELVTSSYRNSFFNPANYGQHGTAV 187

Query: 208 ----------PAAFSRKAVTS-----------------TDNFEMWGDGKQTRSLTFIDEC 240
                        ++   +                             +       + + 
Sbjct: 188 ATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK 247

Query: 241 VEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDT 300
           +          +    N      V       +    E     +     P        D +
Sbjct: 248 LYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCS 307

Query: 301 LINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLS 340
               +LGW P       L     W K  +         ++
Sbjct: 308 KAKMQLGWHPRWNLNTTLEYIVGWHKNWLSGTDMHEYSIT 347

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 7e-04
 Identities = 20/227 (8%), Positives = 61/227 (26%), Gaps = 39/227 (17%)

Query: 25  RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL 84
           +I+  G  G        +     +          +     + +    E        + D+
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGY---------EVTVLVRDSSRLPSEGPRPAHVVVGDV 55

Query: 85  RVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLT 144
               +  +  +G D +  L      +              +  + +++ A + +GV    
Sbjct: 56  LQAADVDKTVAGQDAVIVLLGTRNDLSP--------TTVMSEGARNIVAAMKAHGVD--K 105

Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG 204
               +SA +  +  ++   ++                 +    + +     +        
Sbjct: 106 VVACTSAFLLWDPTKVPPRLQAVTDDH-----------IRMHKVLRESGLKYVAVM---- 150

Query: 205 EKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
              P     +    T  + +  DG+    +    +    +LR + +D
Sbjct: 151 ---PPHIGDQP--LTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTD 192

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} Length = 221

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 14/143 (9%), Positives = 38/143 (26%), Gaps = 2/143 (1%)

Query: 20  PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEF 79
              +   + +G+G +  + I       +H       +     +     E+ ++    +++
Sbjct: 30  EDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDY 89

Query: 80  HLVDLRVMDNCLRMTSGVDNMSNLAADM--GGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
              D    D  +     +   S  A                  M  +      M++AA+ 
Sbjct: 90  SNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKA 149

Query: 138 NGVMSLTFFFVSSACIYPEFKQL 160
                +  +         +   L
Sbjct: 150 ANKKLMIGYRCHYNQFSAQLDHL 172

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	366
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.98
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.93
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.92
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.87
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.86
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.85
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.78
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.76
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.76
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.75
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.75
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.74
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.74
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.73
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.73
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.73
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.73
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.73
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.72
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.71
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.7
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.7
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.7
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.7
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.69
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.69
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.69
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.69
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.68
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.68
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.68
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.68
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.68
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.67
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.67
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.67
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.67
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.67
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.66
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.66
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.66
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.64
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.64
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.63
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.63
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.62
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.61
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.61
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.61
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.61
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.61
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.6
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.59
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.58
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.57
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.56
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.55
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.55
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.5
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.49
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.47
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.47
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.46
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.42
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.42
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.39
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.37
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.29
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.19
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.19
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.18
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.08
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.95
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.52
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.42
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.37
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.3
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.26
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.11
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.1
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.1
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.1
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.08
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.95
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.92
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.84
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.83
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.83
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.82
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.82
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.8
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.77
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.73
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.68
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.67
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.66
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.64
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.62
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.58
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.57
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.54
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.54
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.49
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.47
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.46
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.42
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.41
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.4
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.39
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.32
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.26
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.25
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.22
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.19
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.18
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.11
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.11
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.11
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.11
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.1
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.09
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.07
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.06
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.03
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.0
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.99
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.99
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.97
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.94
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.9
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.9
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.8
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.79
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.76
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.7
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.59
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.57
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.56
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.51
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.49
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.49
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.45
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.38
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.3
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.26
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.26
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.23
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.21
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.16
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.99
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.93
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.78
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.75
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.74
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.72
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.63
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.61
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.59
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.58
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.51
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.47
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.46
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.42
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.39
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.35
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.31
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.3
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	95.3
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.29
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.26
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.26
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.24
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.24
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.23
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.11
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.07
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.04
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.0
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.97
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	94.96
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	94.94
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.92
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.87
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.86
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.69
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.69
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.66
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.61
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.51
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.45
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.36
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.35
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.32
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.29
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.23
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.21
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.17
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.07
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.07
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	94.04
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	93.84
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.76
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.7
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.48
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.46
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.45
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.38
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.19
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.14
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.14
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.12
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.07
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.98
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.95
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.91
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.9
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.8
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.78
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.7
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.35
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.32
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.23
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.17
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.14
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	91.99
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.89
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.77
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.43
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	91.4
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.2
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.06
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	90.67
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.61
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.26
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.13
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.72
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.64
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.57
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	89.2
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.16
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	89.04
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.96
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	88.67
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	88.61
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	88.54
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	88.45
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	88.35
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	88.3
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	88.18
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	88.16
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.05
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.99
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.95
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.94
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.91
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	86.95
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.73
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	86.13
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	85.85
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.75
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	85.62
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.4
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.07
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	84.43
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.25
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.87
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.9
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	82.4
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	81.72
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	81.17
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.62
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.5
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	80.46

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.8e-51  Score=379.34  Aligned_cols=343  Identities=77%  Similarity=1.246  Sum_probs=296.5

Q ss_pred             cccccccCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh
Q 044498            9 TYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD   88 (366)
Q Consensus         9 ~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~   88 (366)
                      +|..+.+++-||.+.|||||||||||||++|+++|+++|++         |+++++.............++..+|+.+.+
T Consensus         1 ~~~~~~~~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~---------V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~   71 (363)
T d2c5aa1           1 TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIASDWKKNEHMTEDMFCDEFHLVDLRVME   71 (363)
T ss_dssp             CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCCSSSCGGGTCSEEEECCTTSHH
T ss_pred             ChhhccccCcCCCCCCEEEEECCCCHHHHHHHHHHHHCcCE---------EEEEeCCCccchhhhcccCcEEEeechhHH
Confidence            35677888999999999999999999999999999999999         999998776655554455689999999999


Q ss_pred             HHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCC---cc
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD---VK  165 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~---~~  165 (366)
                      .+.++++++|+|||+|+..........++...+..|+.++.++++++++++++  ||||+||..+|+.....+..   ..
T Consensus        72 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk--~~i~~SS~~~~~~~~~~~~~~~~~~  149 (363)
T d2c5aa1          72 NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIK--RFFYASSACIYPEFKQLETTNVSLK  149 (363)
T ss_dssp             HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             HHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCcc--ccccccccccccccccccccccccc
Confidence            99999999999999998776544445667778999999999999999999999  99999999999977655431   12


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC---------------cHHHHHHHHHhCCCCeEEecCCcc
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK---------------APAAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~---------------~~~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      +.+..+..|.++|+.+|+++|++++.+.+.++++++++|+.               ..............+...++++.+
T Consensus       150 ~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  229 (363)
T d2c5aa1         150 ESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  229 (363)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             cccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCe
Confidence            23445778999999999999999999999999999999631               112222222333667778899999


Q ss_pred             eeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCCCCcccccChHHHHHHcCCCC
Q 044498          231 TRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAP  310 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p  310 (366)
                      .++|+|++|+++++..+++.+.+++||+++++.+|+.|+++.+.+..|.+.++...+.+.+.....+|++|+++.|||.|
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p  309 (363)
T d2c5aa1         230 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAP  309 (363)
T ss_dssp             EECCEEHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCC
T ss_pred             EEEEeehhHHHHHHHHHHhCCCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCCCccccccCHHHHHHHhCCCC
Confidence            99999999999999999998889999999999999999999999999999888888888888888899999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhhcCCceeeecccccccccCccccCCCCcc
Q 044498          311 TMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVVATQAPVQLGSPCAE  362 (366)
Q Consensus       311 ~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (366)
                      +++++++|+++++||+++..+.+..+.....|..++.+..+.|+++|+-=|-
T Consensus       310 ~~sleegi~~ti~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (363)
T d2c5aa1         310 NMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAA  361 (363)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccCceecC
Confidence            9999999999999999999988888999999999999999999999986544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-47  Score=346.40  Aligned_cols=293  Identities=22%  Similarity=0.324  Sum_probs=243.6

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ++||||||||||||++|+++|+++|++         |+++++.................+|+.+.+.+..++.++|+|||
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~---------V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vih   71 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHE---------VTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYH   71 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCE---------EEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEE
Confidence            478999999999999999999999999         99998754332222111123334455555555556678999999


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc---CCCCCCCCchH
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE---AWPAEPQDAYG  179 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~---~~~~~p~~~Y~  179 (366)
                      +|+.++. ..+..++...+++|+.++.+|++++++.++   ||||+||++|||.....|.  .|+.   ..+..|.+.|+
T Consensus        72 lAa~~~~-~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~---k~I~~SS~~vy~~~~~~~~--~e~~~~~~~~~~p~~~Y~  145 (312)
T d2b69a1          72 LASPASP-PNYMYNPIKTLKTNTIGTLNMLGLAKRVGA---RLLLASTSEVYGDPEVHPQ--SEDYWGHVNPIGPRACYD  145 (312)
T ss_dssp             CCSCCSH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHTC---EEEEEEEGGGGBSCSSSSB--CTTCCCBCCSSSTTHHHH
T ss_pred             CcccCCc-hhHHhCHHHHHHHHHHHHHHHHHHHHHcCC---cEEEEEChheecCCCCCCC--CccccCCCCCCCCccHHH
Confidence            9997653 234567788899999999999999999886   7999999999998766554  4443   23667899999


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeCC-------------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHH
Q 044498          180 LEKLATEGLCKHYTKDFEIECRLVGE-------------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLR  246 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~~~i~r~-------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  246 (366)
                      .+|.++|.+++.+++.++++++++|+             ..++.++.+++. ++++.+++++.+.++|+|++|+++++..
T Consensus       146 ~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~-g~~i~i~~~g~~~r~~i~v~D~~~~~~~  224 (312)
T d2b69a1         146 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYVSDLVNGLVA  224 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHH-TCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHc-CCCeEEeCCCCeeEccEEHHHHHHHHHH
Confidence            99999999999999999999999852             245678888887 7889999999999999999999999999


Q ss_pred             HHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 044498          247 LIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDDTLINEELGWAPTMKQKDELRITYFWI  325 (366)
Q Consensus       247 ~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~  325 (366)
                      +++...+++||+++++.+++.++++.+.+.+|.+.++.+.+.+. +.....+|++|++++|||+|+++++++|+++++||
T Consensus       225 ~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~  304 (312)
T d2b69a1         225 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF  304 (312)
T ss_dssp             HHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             HHhhccCCceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence            99988899999999999999999999999999988887776554 45567789999999999999999999999999999


Q ss_pred             HHHHHH
Q 044498          326 KEQVEK  331 (366)
Q Consensus       326 ~~~~~~  331 (366)
                      +++.+.
T Consensus       305 ~~~~~~  310 (312)
T d2b69a1         305 RKELEY  310 (312)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            998764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=5.6e-45  Score=334.66  Aligned_cols=299  Identities=21%  Similarity=0.254  Sum_probs=249.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc------ccccccccceEEEccCCChhHHHhhhcCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE------HMMEDMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~------~~~~~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      |||||||||||||++|+++|+++|+++.-.+.   |+++++....      .......+++++.+|+.+...+......+
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~---i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   77 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADE---VIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGV   77 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSE---EEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCce---EEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccccc
Confidence            68999999999999999999999987332222   5666543221      11123346789999999999888888899


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA  177 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~  177 (366)
                      |+|+|+|+.... .....++...+.+|+.++.+++++|.+.+++  +|||+||.++||.....+.  +|+.  +..|.+.
T Consensus        78 d~vi~~a~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~--~~I~~Ss~~~yg~~~~~~~--~E~~--~~~p~~~  150 (322)
T d1r6da_          78 DAIVHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVDAGVG--RVVHVSTNQVYGSIDSGSW--TESS--PLEPNSP  150 (322)
T ss_dssp             CEEEECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCC--EEEEEEEGGGGCCCSSSCB--CTTS--CCCCCSH
T ss_pred             ceEEeecccccc-cccccchHHHhhhhHHHHHHHHHHHHHcCCc--eEEEeecceeecCCCCCCC--CCCC--CCCCCCH
Confidence            999999986542 2445567788999999999999999999999  9999999999998877654  5655  8889999


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEeCC-----------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHH
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLVGE-----------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLR  246 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  246 (366)
                      |+.+|.++|.+++.++++++++++++|+           ..++.++.++.. ++++.+++++.+.++|+|++|+|+++..
T Consensus       151 Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~-~~~i~v~~~g~~~r~~i~v~D~a~ai~~  229 (322)
T d1r6da_         151 YAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLD-GGTLPLYGDGANVREWVHTDDHCRGIAL  229 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHT-TCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHc-CCCcEEecCCCeEEccEEHHHHHHHHHH
Confidence            9999999999999999999999999952           245777777776 6789999999999999999999999999


Q ss_pred             HHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCc--CCCCCCCcccccChHHHHHHcCCCCCCCHHHHHHHHHH
Q 044498          247 LIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLPIHP--IPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYF  323 (366)
Q Consensus       247 ~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~--~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~  323 (366)
                      +++++ .+++||+++++++++.|+++.+.+.+|.+.+...  .+.+.......+|++|+++.|||+|+++++|+|+++++
T Consensus       230 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~  309 (322)
T d1r6da_         230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVR  309 (322)
T ss_dssp             HHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHH
T ss_pred             HHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHH
Confidence            99886 5789999999999999999999999998755322  23344556678999999999999999999999999999


Q ss_pred             HHHHHHHHhh
Q 044498          324 WIKEQVEKEK  333 (366)
Q Consensus       324 ~~~~~~~~~~  333 (366)
                      ||++|.....
T Consensus       310 w~~~n~~~~~  319 (322)
T d1r6da_         310 WYRENRGWWE  319 (322)
T ss_dssp             HHHHCHHHHG
T ss_pred             HHHHhHHhHh
Confidence            9999876544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.2e-45  Score=340.22  Aligned_cols=292  Identities=17%  Similarity=0.139  Sum_probs=232.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-----------cccccccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-----------MMEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-----------~~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++|||||||||||++|+++|+++|++         |++++|.....           ......+++++.+|++|.+++.+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   72 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYE---------VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTR   72 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECC---------------------CCEEECCCCSSCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCE---------EEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHH
Confidence            67999999999999999999999999         99999854311           11223467899999999999999


Q ss_pred             hhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCc-eeEEEEecccccCCCCCCCCCcccccC
Q 044498           93 MTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMS-LTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        93 ~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      +++  ++|+|||+|+..+.. .+..++..++++|+.++.+|+++|++.+++. .||||+||++|||.....|.  +|+. 
T Consensus        73 ~~~~~~~d~v~h~aa~~~~~-~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~--~E~~-  148 (357)
T d1db3a_          73 ILREVQPDEVYNLGAMSHVA-VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQ--KETT-  148 (357)
T ss_dssp             HHHHHCCSEEEECCCCCTTT-TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSB--CTTS-
T ss_pred             HHhccCCCEEEEeecccccc-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCc--CCCC-
Confidence            987  579999999987632 4456778889999999999999999976431 16999999999997665543  6654 


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC--------------cHHHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK--------------APAAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~--------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                       +..|.++|+.+|+++|.+++.+++.++++++++|+.              .+..++.....++....+++++.+.++|+
T Consensus       149 -~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~  227 (357)
T d1db3a_         149 -PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (357)
T ss_dssp             -CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             -CCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence             788999999999999999999999999999999731              12333444444445556678999999999


Q ss_pred             eHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC----------------------------
Q 044498          236 FIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP----------------------------  287 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~----------------------------  287 (366)
                      |++|+++++..+++.+.++.||+++|+.+|+.|+++.+.+.+|....+...+                            
T Consensus       228 ~v~D~~~a~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (357)
T d1db3a_         228 HAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVD  307 (357)
T ss_dssp             EHHHHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEEC
T ss_pred             eechHHHHHHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeec
Confidence            9999999999999988899999999999999999999999998542211100                            


Q ss_pred             ----CCCCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          288 ----GPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       288 ----~~~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                          .|.+.....+|++|++++|||.|+++++|+|+++++++.+..
T Consensus       308 ~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~~~  353 (357)
T d1db3a_         308 PRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA  353 (357)
T ss_dssp             GGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHH
Confidence                011233346799999999999999999999999998877754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.2e-44  Score=334.66  Aligned_cols=299  Identities=18%  Similarity=0.272  Sum_probs=239.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc------cccccccceEEEccCCChhHHHhhhc--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH------MMEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~------~~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      |||||||||||||++|+++|++.|+++        |+++++.....      ......+++++.+|++|...+.++++  
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~v--------v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   72 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDT--------VVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY   72 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCE--------EEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCE--------EEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC
Confidence            689999999999999999999999971        44555432211      11223467999999999999998876  


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcC---------CCceeEEEEecccccCCCCCCCCC---
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNG---------VMSLTFFFVSSACIYPEFKQLDTD---  163 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---------~~~~r~I~~SS~~vyg~~~~~~~~---  163 (366)
                      ++|+|||||+..+ +..+..++...+++|+.++.+++++|++.+         ++  +|||+||..+||.....+..   
T Consensus        73 ~~d~VihlAa~~~-~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~--~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          73 QPDAVMHLAAESH-VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNF--RFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CCSEEEECCSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHC--EEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCCEEEECccccc-hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCce--EEEEeccceeeCCCccCCccccc
Confidence            6999999999765 334556788899999999999999998753         45  89999999999976543320   


Q ss_pred             --c-ccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC-----------CcHHHHHHHHHhCCCCeEEecCCc
Q 044498          164 --V-KESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE-----------KAPAAFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       164 --~-~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-----------~~~~~~~~~~~~~~~~~~i~~~~~  229 (366)
                        . ...+..+..|.+.||.+|+++|.++..+.+.++++++++|+           ..++.++.+++. ++++.++++++
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~-g~~~~v~g~g~  228 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE-GKPLPIYGKGD  228 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHH-TCCEEEETTSC
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHc-CCCcEEeCCCC
Confidence              0 01123467899999999999999999999999999999953           245778888887 78899999999


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC--------CCcCCC-CCCCcccccCh
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP--------IHPIPG-PEGVRGRNSDD  299 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--------~~~~~~-~~~~~~~~~~~  299 (366)
                      +.|+|+|++|+|+++..++++. .+++||+++++..++.|+++.+.+.++...+        +...+. +.......+|+
T Consensus       229 ~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (361)
T d1kewa_         229 QIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDA  308 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCC
T ss_pred             eEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCH
Confidence            9999999999999999999876 5789999999999999999999876653322        222222 23455668899


Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhhh
Q 044498          300 TLINEELGWAPTMKQKDELRITYFWIKEQVEKEKA  334 (366)
Q Consensus       300 ~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~  334 (366)
                      +|++++|||+|+++++++|+++++||+++..+...
T Consensus       309 ~k~~~~lgw~P~~~l~e~i~~ti~w~~~n~~~~~~  343 (361)
T d1kewa_         309 GKISRELGWKPLETFESGIRKTVEWYLANTQWVNN  343 (361)
T ss_dssp             HHHHHHHCCCCSCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHhHHHHHH
Confidence            99999999999999999999999999999765543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-43  Score=327.97  Aligned_cols=292  Identities=19%  Similarity=0.224  Sum_probs=239.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      |||||||||||||++|++.|+++|++         |++++|......       .....+++++++|++|.+.+.++++ 
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~---------V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   71 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHD---------VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD   71 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCE---------EEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc
Confidence            68999999999999999999999999         999987433211       1123367999999999999999987 


Q ss_pred             -CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                       ++|+|||+|+..+ ...+..++...+.+|+.++.+++++|++.+++  +||++||.++|+.....+.  . ++.....|
T Consensus        72 ~~~d~ViHlAa~~~-~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~--~~i~~Ss~~vy~~~~~~~~--~-e~~~~~~p  145 (338)
T d1udca_          72 HAIDTVIHFAGLKA-VGESVQKPLEYYDNNVNGTLRLISAMRAANVK--NFIFSSSATVYGDQPKIPY--V-ESFPTGTP  145 (338)
T ss_dssp             TTCSEEEECCSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEGGGGCSCCSSSB--C-TTSCCCCC
T ss_pred             cCCCEEEECCCccc-hhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCC--EEEecCcceEEcccccccc--c-cccccCCC
Confidence             7999999999754 22445577889999999999999999999999  9999999999987766542  2 23345679


Q ss_pred             CCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCC---------------------cHHHHHHHHHhCCCCeEEecC-----
Q 044498          175 QDAYGLEKLATEGLCKHYTKDF-EIECRLVGEK---------------------APAAFSRKAVTSTDNFEMWGD-----  227 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~---------------------~~~~~~~~~~~~~~~~~i~~~-----  227 (366)
                      .+.|+.+|..+|.++..+.... +++++++|..                     .+..++..+..++.++.++|+     
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~  225 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSST
T ss_pred             cchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccC
Confidence            9999999999999999776654 7888887421                     223444445555567777764     


Q ss_pred             -CcceeeeeeHHHHHHHHHHHHhc----CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccChHH
Q 044498          228 -GKQTRSLTFIDECVEGVLRLIKS----DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDDTL  301 (366)
Q Consensus       228 -~~~~~~~i~v~D~a~~~~~~l~~----~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~k  301 (366)
                       +.+.++|+|++|++.++..+...    ..+++||+++++++|+.|+++.|.+.+|.+.++...+.+. +.....+|++|
T Consensus       226 ~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k  305 (338)
T d1udca_         226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASK  305 (338)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHH
T ss_pred             CCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCCCEeeECHHH
Confidence             67789999999999988877654    2457899999999999999999999999988887777654 45667889999


Q ss_pred             HHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Q 044498          302 INEELGWAPTMKQKDELRITYFWIKEQVE  330 (366)
Q Consensus       302 ~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  330 (366)
                      ++++|||+|+++++++|+++++|++++.+
T Consensus       306 ~~~~lgwkp~~~l~egi~~ti~w~~~~~~  334 (338)
T d1udca_         306 ADRELNWRVTRTLDEMAQDTWHWQSRHPQ  334 (338)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHCCCcCCCHHHHHHHHHHHHHhchh
Confidence            99999999999999999999999999864

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.3e-42  Score=322.05  Aligned_cols=301  Identities=19%  Similarity=0.226  Sum_probs=240.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-----cccccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-----MMEDMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-----~~~~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      |||+|||||||||||++|+++|+++|++       ++|+++++.....     ......+++++.+|+.|.+.+..++.+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~-------v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~   73 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPD-------VHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK   73 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTT-------CEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCC-------eEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhh
Confidence            6899999999999999999999999987       1134444322111     112334679999999999999999999


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC--------CCCccccc
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL--------DTDVKESE  168 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~--------~~~~~e~~  168 (366)
                      ++.|+|+|+.... ..+..++...++.|+.++.++++++...+.   ++|++||..+||.....        .......+
T Consensus        74 ~~~v~~~a~~~~~-~~~~~~~~~~~~~N~~g~~nll~~~~~~~~---k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e  149 (346)
T d1oc2a_          74 ADAIVHYAAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARKYDI---RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA  149 (346)
T ss_dssp             CSEEEECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHHTC---EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred             hhhhhhhhhcccc-cchhhCcccceeeehHhHHhhhhhhccccc---cccccccceEecccCccccccccccCccccccc
Confidence            9999999997653 244567888899999999999999999986   79999999999853110        00012233


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC-----------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE-----------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFI  237 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v  237 (366)
                      ..+..|.+.||.+|+++|.+++.+++.++++++++|+           ..+..++..... +.++.+++++.+.++|+|+
T Consensus       150 ~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~-~~~~~i~~~g~~~r~~i~v  228 (346)
T d1oc2a_         150 ETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILA-GIKPKLYGEGKNVRDWIHT  228 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHH-TCCCEEETTSCCEEECEEH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHc-CCceeEeCCCCccccccch
Confidence            3477899999999999999999999999999999963           233555666666 6778889999999999999


Q ss_pred             HHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCCCCC-CCcCCC-CCCCcccccChHHHHHHcCCCCCC-C
Q 044498          238 DECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENEKLP-IHPIPG-PEGVRGRNSDDTLINEELGWAPTM-K  313 (366)
Q Consensus       238 ~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~-~~~~~~~~~~~~k~~~~lG~~p~~-~  313 (366)
                      +|+|++++.+++++ .++.|++++++..++.++++.|.+.++.+.. +...+. +.......+|++|++++|||.|++ +
T Consensus       229 ~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~  308 (346)
T d1oc2a_         229 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTD  308 (346)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCC
T ss_pred             hhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCC
Confidence            99999999988776 6789999999999999999999999987543 333333 344556778999999999999987 6


Q ss_pred             HHHHHHHHHHHHHHHHHHhhh
Q 044498          314 QKDELRITYFWIKEQVEKEKA  334 (366)
Q Consensus       314 ~~e~l~~~~~~~~~~~~~~~~  334 (366)
                      |+++|+++++||++|.....+
T Consensus       309 l~e~i~~ti~w~~~n~~~~~~  329 (346)
T d1oc2a_         309 FSEGLEETIQWYTDNQDWWKA  329 (346)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998765544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.1e-42  Score=321.84  Aligned_cols=291  Identities=20%  Similarity=0.199  Sum_probs=243.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----------ccccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----------MEDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----------~~~~~~v~~~~~D~~~~~~l   90 (366)
                      ++++|||||||||||++|+++|+++|++         |++++|......           ......++++.+|+.|...+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~---------V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~   85 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQK---------VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC   85 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCE---------EEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccc
Confidence            6689999999999999999999999999         999987443211           11223568999999999998


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      .....+++.|+|+++.... ..+..++...++.|+.++.+|+++|++.+++  +|||+||.++||.....|.  .|+.  
T Consensus        86 ~~~~~~~~~v~~~~a~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~i~~SS~~vyg~~~~~~~--~E~~--  158 (341)
T d1sb8a_          86 NNACAGVDYVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARDAKVQ--SFTYAASSSTYGDHPGLPK--VEDT--  158 (341)
T ss_dssp             HHHHTTCSEEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS--EEEEEEEGGGGTTCCCSSB--CTTC--
T ss_pred             ccccccccccccccccccc-cccccCccchhheeehhHHHHHHHHHhcCCc--eEEEcccceeeCCCCCCCc--cCCC--
Confidence            8888899999999986542 2456677888999999999999999999999  9999999999998776653  5554  


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCC---------------CcHHHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGE---------------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~---------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                      +..|.+.|+.+|.++|+++..+++.++++++++|+               ..+..++..++. ++++.+++++.+.++|+
T Consensus       159 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~-g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         159 IGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GDDVYINGDGETSRDFC  237 (341)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCE
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHc-CCceEEcCCCCEEEEEE
Confidence            88999999999999999999999999999999963               234566777777 78899999999999999


Q ss_pred             eHHHHHHHHHHHHhcC---CCCcEEecCCCcccHHHHHHHHHHhcCCCCCC-----CcCCCC-CCCcccccChHHHHHHc
Q 044498          236 FIDECVEGVLRLIKSD---FREPLNIGSDEMVSINEMAEIILSFENEKLPI-----HPIPGP-EGVRGRNSDDTLINEEL  306 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-----~~~~~~-~~~~~~~~~~~k~~~~l  306 (366)
                      |++|++.++..++..+   .+++||+++++.+|+.|+++.|.+.++.+...     .+.+.+ ........|++|+++.|
T Consensus       238 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~L  317 (341)
T d1sb8a_         238 YIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLL  317 (341)
T ss_dssp             EHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHT
T ss_pred             EEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHH
Confidence            9999999999988764   47799999999999999999999988854221     111222 23445678999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHH
Q 044498          307 GWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       307 G~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ||+|+++++++|+++++||++..
T Consensus       318 Gw~p~~sl~~gi~~ti~wy~~~~  340 (341)
T d1sb8a_         318 GYAPKYDVSAGVALAMPWYIMFL  340 (341)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHT
T ss_pred             CCCcCCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999999853

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-42  Score=320.31  Aligned_cols=290  Identities=19%  Similarity=0.240  Sum_probs=235.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccc-ccccccceEEEccCCChhHHHh-hhcCCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHM-MEDMFCHEFHLVDLRVMDNCLR-MTSGVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~-~~~~~~v~~~~~D~~~~~~l~~-~~~~~d~v  100 (366)
                      |||||||||||||++|+++|+++|+ +         |+++++...... .....+++++.+|+++.+++.+ +++++|+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~---------V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~V   71 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYE---------VYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVV   71 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCE---------EEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCE---------EEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcc
Confidence            6899999999999999999999995 7         999987654322 2234568999999998766555 66789999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc-----cCCCCCCC
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES-----EAWPAEPQ  175 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~-----~~~~~~p~  175 (366)
                      ||+|+..... ....++...+..|+.++.++++++.+.++   +++|+||..+|+.......  .|.     +.....|.
T Consensus        72 ih~a~~~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~---~~~~~ss~~~~~~~~~~~~--~~~~~~~~~~~~~~p~  145 (342)
T d2blla1          72 LPLVAIATPI-EYTRNPLRVFELDFEENLRIIRYCVKYRK---RIIFPSTSEVYGMCSDKYF--DEDHSNLIVGPVNKPR  145 (342)
T ss_dssp             EECBCCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTC---EEEEECCGGGGBTCCCSSB--CTTTCCCBCCCTTCGG
T ss_pred             cccccccccc-ccccCCccccccccccccccccccccccc---ccccccccccccccccccc--ccccccccccccCCCc
Confidence            9999976532 34456677899999999999999999987   5789999999997765443  221     12244678


Q ss_pred             CchHHHHHHHHHHHHHHHHHcCCcEEEeCC-------------------CcHHHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          176 DAYGLEKLATEGLCKHYTKDFEIECRLVGE-------------------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~-------------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                      +.|+.+|.++|+++..+++.++++++++|.                   ..+..++.+++. ++++.+++++.+.++|+|
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~g~~~r~~i~  224 (342)
T d2blla1         146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTD  224 (342)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH-TCCEEEGGGSCCEEECEE
T ss_pred             chhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHh-CCCccccCCCCeeeeecc
Confidence            899999999999999999999999998831                   134677777887 788999999999999999


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC-cccHHHHHHHHHHhcCCCCCCCcCCCCC----------------CCccc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE-MVSINEMAEIILSFENEKLPIHPIPGPE----------------GVRGR  295 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~----------------~~~~~  295 (366)
                      ++|+|+++..+++++    .+++||+++++ .+|+.|+++.|.+.+|........|...                .....
T Consensus       225 v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (342)
T d2blla1         225 IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHR  304 (342)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCC
T ss_pred             cccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccccccccccccc
Confidence            999999999999763    46799998775 5899999999999999876655544322                12344


Q ss_pred             ccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          296 NSDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       296 ~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      .+|++|++++|||+|+++++|+|+++++||+++.
T Consensus       305 ~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~  338 (342)
T d2blla1         305 KPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (342)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             ccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCc
Confidence            6799999999999999999999999999999975

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.6e-41  Score=311.08  Aligned_cols=293  Identities=15%  Similarity=0.105  Sum_probs=237.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhhc--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      ++|||||||||||++|+++|+++|++         |++++|.......      ....+++++.+|++|.+.+.+.+.  
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~---------V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYR---------VHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCE---------EEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc
Confidence            58999999999999999999999999         9999987643221      123467899999999999988775  


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQ  175 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~  175 (366)
                      .+++++|+|+... ......++..++..|+.++.++++++++.+++ .+|+++||..+||.....+.  .|  +.+..|.
T Consensus        72 ~~~~~~~~a~~~~-~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~--~E--~~~~~p~  145 (321)
T d1rpna_          72 QPQEVYNLAAQSF-VGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE-TRFYQASTSEMFGLIQAERQ--DE--NTPFYPR  145 (321)
T ss_dssp             CCSEEEECCSCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT-SEEEEEEEGGGGCSCSSSSB--CT--TSCCCCC
T ss_pred             ccccccccccccc-ccccccchHHHHhhhhhchHHHHHHHHHhCCC-cccccccchhhcCcccCCCC--CC--CCCcccc
Confidence            5789999988654 23444566778999999999999999998854 16888888889987766543  44  4588999


Q ss_pred             CchHHHHHHHHHHHHHHHHHcCCcEEEeCCC----------c----HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          176 DAYGLEKLATEGLCKHYTKDFEIECRLVGEK----------A----PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       176 ~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~----------~----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                      +.|+.+|+++|+++..++..++++++++|..          .    +..++.+...++.+...++++++.++|+|++|+|
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~  225 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYV  225 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHH
Confidence            9999999999999999999999999888631          1    2333444444455556679999999999999999


Q ss_pred             HHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCc--CC--C-CCCCcccccChHHHHHHcCCCCCCCHHH
Q 044498          242 EGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP--IP--G-PEGVRGRNSDDTLINEELGWAPTMKQKD  316 (366)
Q Consensus       242 ~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~--~~--~-~~~~~~~~~~~~k~~~~lG~~p~~~~~e  316 (366)
                      +++..+++++.++.||+++++..|+.++++.+.+..|.+.+...  .+  . |.+......|++|++++|||.|+++++|
T Consensus       226 ~~~~~~~~~~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e  305 (321)
T d1rpna_         226 EAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDE  305 (321)
T ss_dssp             HHHHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHH
T ss_pred             HHHHHHHhcCCcCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHH
Confidence            99999999998999999999999999999999999997643222  21  1 2334556789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 044498          317 ELRITYFWIKEQVEK  331 (366)
Q Consensus       317 ~l~~~~~~~~~~~~~  331 (366)
                      +|++|++|+.++..+
T Consensus       306 ~i~~tv~~~l~~~~~  320 (321)
T d1rpna_         306 LIRMMVEADLRRVSR  320 (321)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999987654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=315.34  Aligned_cols=295  Identities=18%  Similarity=0.210  Sum_probs=238.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------------ccccccceEEEccCCChhH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------------MEDMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------------~~~~~~v~~~~~D~~~~~~   89 (366)
                      .+||||||||||||++|+++|+++|++         |+++++......             .....++.++.+|++|.+.
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~---------V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   72 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYL---------PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGA   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCC---------EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCE---------EEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccc
Confidence            368999999999999999999999999         999976332110             1123457899999999999


Q ss_pred             HHhhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           90 CLRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        90 l~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      +.+++.  ++++++|+|+..+ ...+..++...++.|+.++.++++++++.+++  +|||+||..+||......   .+.
T Consensus        73 l~~~~~~~~~~~i~h~Aa~~~-~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~--~~i~~ss~~~~~~~~~~~---~~~  146 (346)
T d1ek6a_          73 LQRLFKKYSFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK--NLVFSSSATVYGNPQYLP---LDE  146 (346)
T ss_dssp             HHHHHHHCCEEEEEECCSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGGCSCSSSS---BCT
T ss_pred             ccccccccccccccccccccC-cHhhHhCHHHHHHhhhcccccccchhhhcCcc--cccccccceeeecccccc---ccc
Confidence            999775  5678999999765 33455677888999999999999999999999  999999999999876654   333


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHH-cCCcEEEeCC---------------------CcHHHHHHHHHhCCCCeEEe
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKD-FEIECRLVGE---------------------KAPAAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~-~~~~~~i~r~---------------------~~~~~~~~~~~~~~~~~~i~  225 (366)
                      +.....|.++|+.+|..+|+.+..+.+. .+++.+++|.                     ..+..++..+..++.++.++
T Consensus       147 ~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~  226 (346)
T d1ek6a_         147 AHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (346)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             cccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEc
Confidence            3334568899999999999999998776 4788887742                     12334455555556777776


Q ss_pred             c------CCcceeeeeeHHHHHHHHHHHHhc----CCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcc
Q 044498          226 G------DGKQTRSLTFIDECVEGVLRLIKS----DFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRG  294 (366)
Q Consensus       226 ~------~~~~~~~~i~v~D~a~~~~~~l~~----~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~  294 (366)
                      +      ++.+.|+|+|++|+|.++..++..    ..+++||+++++.+++.|+++.|.+.+|.+.++.+.|.+. +...
T Consensus       227 g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~  306 (346)
T d1ek6a_         227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAA  306 (346)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSE
T ss_pred             CCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCCCCE
Confidence            5      356789999999999999887644    2457899999999999999999999999988877777654 4566


Q ss_pred             cccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 044498          295 RNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKE  332 (366)
Q Consensus       295 ~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~  332 (366)
                      ..+|++|++++|||+|+++++|+|+++++||++|+.+.
T Consensus       307 ~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~~~~  344 (346)
T d1ek6a_         307 CYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF  344 (346)
T ss_dssp             ECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTTCS
T ss_pred             eeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCHhhc
Confidence            67899999999999999999999999999999998654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.9e-42  Score=316.12  Aligned_cols=294  Identities=17%  Similarity=0.202  Sum_probs=230.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhhc-
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      |.|||||||||||++|+++|+++|++         |+++++......       .....+++++.+|++|.+.+.+++. 
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~---------V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~   72 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYD---------CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCe---------EEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc
Confidence            35999999999999999999999999         999986544321       1123467999999999999999876 


Q ss_pred             -CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                       ++|+|||+|+..+ +.....++..+..+|+.++.+|+++|++.+++  ||||+||..+||.....+...+.+++.+..|
T Consensus        73 ~~~d~VihlAa~~~-~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~--~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p  149 (347)
T d1z45a2          73 YKIDSVIHFAGLKA-VGESTQIPLRYYHNNILGTVVLLELMQQYNVS--KFVFSSSATVYGDATRFPNMIPIPEECPLGP  149 (347)
T ss_dssp             SCCCEEEECCSCCC-HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC
T ss_pred             cCCCEEEEcccccc-ccccccCcccccccchhhhHHHHHHHHhcccc--eEEeecceeeecCcccCCCCCccccccCCCC
Confidence             8999999999764 23445577788999999999999999999999  9999999999998766543223344458889


Q ss_pred             CCchHHHHHHHHHHHHHHHHH--cCCcEEEeCCC---------------------cHHHHHHHHHhCCCCeEEecCC---
Q 044498          175 QDAYGLEKLATEGLCKHYTKD--FEIECRLVGEK---------------------APAAFSRKAVTSTDNFEMWGDG---  228 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~--~~~~~~i~r~~---------------------~~~~~~~~~~~~~~~~~i~~~~---  228 (366)
                      .++|+.+|.++|+++..+.+.  .+++++++|+.                     .+..+...+..++.++.+++++   
T Consensus       150 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~  229 (347)
T d1z45a2         150 TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS  229 (347)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------
T ss_pred             CChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccc
Confidence            999999999999999998765  46778777521                     2233344444445667676654   


Q ss_pred             ---cceeeeeeHHHHHHHHHHHHhcC--------CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccc
Q 044498          229 ---KQTRSLTFIDECVEGVLRLIKSD--------FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRN  296 (366)
Q Consensus       229 ---~~~~~~i~v~D~a~~~~~~l~~~--------~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~  296 (366)
                         ...+|++++.|++.++..+++..        .+++||+++++++|+.|+++.+.+.+|.+.++...+.+. +.....
T Consensus       230 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  309 (347)
T d1z45a2         230 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLT  309 (347)
T ss_dssp             CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCC
T ss_pred             cCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEee
Confidence               45678888999999988887641        357899999999999999999999999998877766543 455667


Q ss_pred             cChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          297 SDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       297 ~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      +|++|++++|||+|+++++|+|+++++|+++|+
T Consensus       310 ~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~np  342 (347)
T d1z45a2         310 AKPDRAKRELKWQTELQVEDSCKDLWKWTTENP  342 (347)
T ss_dssp             BCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             ECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhCh
Confidence            899999999999999999999999999999985

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=306.24  Aligned_cols=291  Identities=16%  Similarity=0.154  Sum_probs=231.0

Q ss_pred             CeE-EEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc------------cccccccceEEEccCCChhHH
Q 044498           24 LRI-SSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH------------MMEDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        24 ~~v-lItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~------------~~~~~~~v~~~~~D~~~~~~l   90 (366)
                      +|| ||||||||||++|+++|+++|++         |++++|.....            ......+++++.+|++|.+.+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~---------V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   71 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYE---------VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCL   71 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCE---------EEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhh
Confidence            478 99999999999999999999999         99999865321            011123568999999999999


Q ss_pred             Hhhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC-ceeEEEEecccccCCCCCCCCCcccc
Q 044498           91 LRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM-SLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        91 ~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                      .+++.  ++++++|+++..+ ......++..++++|+.++.+++++++++++. ..+|||+||++|||.....|.  .|+
T Consensus        72 ~~~~~~~~~~~v~~~~a~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~--~E~  148 (347)
T d1t2aa_          72 VKIINEVKPTEIYNLGAQSH-VKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQ--KET  148 (347)
T ss_dssp             HHHHHHHCCSEEEECCSCCC-HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSB--CTT
T ss_pred             HHHHhhcccceeeeeeeccc-cchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCC--CCC
Confidence            99875  6889999999654 22334566777899999999999999998642 117999999999997665553  665


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC----------cH-----HHHHHHHHhCCCCeEEecCCccee
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK----------AP-----AAFSRKAVTSTDNFEMWGDGKQTR  232 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~----------~~-----~~~~~~~~~~~~~~~i~~~~~~~~  232 (366)
                      .  +..|.++||.+|+++|+++..+.+.++++++++|+.          ..     ..+..... +..+..+++++.+.+
T Consensus       149 ~--~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~-~~~~~~~~g~g~~~r  225 (347)
T d1t2aa_         149 T--PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYL-GQLECFSLGNLDAKR  225 (347)
T ss_dssp             S--CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHH-TSCSCEEESCTTCEE
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhc-CCcceeecCCCccee
Confidence            5  888999999999999999999999999999998631          11     12222333 366778889999999


Q ss_pred             eeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCC----------------------CC
Q 044498          233 SLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG----------------------PE  290 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----------------------~~  290 (366)
                      +|+|++|+++++..++++...+.|++..+...++.+....+...++........+.                      |.
T Consensus       226 ~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~  305 (347)
T d1t2aa_         226 DWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPT  305 (347)
T ss_dssp             CCEEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSS
T ss_pred             eeeEecHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCC
Confidence            99999999999999999988889999999999999999999998887633211110                      11


Q ss_pred             CCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Q 044498          291 GVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQV  329 (366)
Q Consensus       291 ~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  329 (366)
                      ......+|++|++++|||+|+++++|+|+++++|..+..
T Consensus       306 ~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~~~~  344 (347)
T d1t2aa_         306 EVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELM  344 (347)
T ss_dssp             CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHH
Confidence            223446799999999999999999999999998776654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.2e-39  Score=297.03  Aligned_cols=294  Identities=15%  Similarity=0.130  Sum_probs=233.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc------------cccccccceEEEccCCChhHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH------------MMEDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~------------~~~~~~~v~~~~~D~~~~~~l   90 (366)
                      ++++||||||||||+||+++|+++||+         |++++|.....            .......++++.+|+++.+.+
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~   71 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYE---------VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSL   71 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCE---------EEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHH
Confidence            478999999999999999999999999         99999864310            011233467999999999999


Q ss_pred             Hhhhc--CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-----CCCceeEEEEecccccCCCCCCCCC
Q 044498           91 LRMTS--GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-----GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        91 ~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                      .+.++  ++|+|||+|+..+. .....++...+..|+.++.+++++++..     ...  ++++.||..+|+.....   
T Consensus        72 ~~~~~~~~~D~Vih~Aa~~~~-~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~--~~~~~ss~~~~~~~~~~---  145 (339)
T d1n7ha_          72 RRWIDVIKPDEVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTV--KYYQAGSSEMFGSTPPP---  145 (339)
T ss_dssp             HHHHHHHCCSEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCC--EEEEEEEGGGGTTSCSS---
T ss_pred             HHHHhhhccchhhhccccccc-cccccCccccccccccccchhhhhhhhcccccccce--eeeecccceecccCCCC---
Confidence            98875  78999999997542 2334577788999999999999999764     233  68888988888776532   


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC----------cH----HHHHHHHHhCCCCeEEecCCc
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK----------AP----AAFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~----------~~----~~~~~~~~~~~~~~~i~~~~~  229 (366)
                      ++|+.  +..|.+.|+.+|+.+|.++..+.+.++++++++|+.          ..    ...+........+..+.+++.
T Consensus       146 ~~E~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~  223 (339)
T d1n7ha_         146 QSETT--PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQ  223 (339)
T ss_dssp             BCTTS--CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCC--CCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCC
Confidence            25544  889999999999999999999999999999999742          11    222223333345556678999


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCc--C--C-CCCCCcccccChHHHHH
Q 044498          230 QTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP--I--P-GPEGVRGRNSDDTLINE  304 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~--~--~-~~~~~~~~~~~~~k~~~  304 (366)
                      +.++++|++|+++++..+++++..+.+++..+...+..++++.+.+.+|...+...  .  . .+.....+.+|++|+++
T Consensus       224 ~~rd~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~  303 (339)
T d1n7ha_         224 ASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKE  303 (339)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHH
T ss_pred             ccccceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHH
Confidence            99999999999999999999998888899999999999999999999997643221  1  1 12334556789999999


Q ss_pred             HcCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 044498          305 ELGWAPTMKQKDELRITYFWIKEQVEKEK  333 (366)
Q Consensus       305 ~lG~~p~~~~~e~l~~~~~~~~~~~~~~~  333 (366)
                      +|||+|+++++++|++|++||++...+++
T Consensus       304 ~LGw~P~~~le~gi~~ti~~~~~~~~~~~  332 (339)
T d1n7ha_         304 VLGWKPQVGFEKLVKMMVDEDLELAKREK  332 (339)
T ss_dssp             HHCCCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCCcCCCHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999876655

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-39  Score=296.82  Aligned_cols=278  Identities=22%  Similarity=0.376  Sum_probs=227.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~v  100 (366)
                      ++||||||||||||++|+++|+++|+.         |+++++..              ..|+.+.+.+..+++  .+|.|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~---------vi~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~v   58 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDV---------ELVLRTRD--------------ELNLLDSRAVHDFFASERIDQV   58 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE---------EEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCE---------EEEecCch--------------hccccCHHHHHHHHhhcCCCEE
Confidence            568999999999999999999999998         87775432              258888888888775  69999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC---CCCCCCc
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW---PAEPQDA  177 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~---~~~p~~~  177 (366)
                      +|+|+..+.......++..++..|+.++.+|+++|++++++  ||||+||.++||.....+.  .|+...   +..|.++
T Consensus        59 ~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~--~~i~~SS~~vyg~~~~~~~--~E~~~~~~~~~~~~~~  134 (315)
T d1e6ua_          59 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN--KLLFLGSSCIYPKLAKQPM--AESELLQGTLEPTNEP  134 (315)
T ss_dssp             EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEECCGGGSCTTCCSSB--CGGGTTSSCCCGGGHH
T ss_pred             EEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEECCceEcCCCCCCCc--cCCccccCCCCCCCCH
Confidence            99998776444445566777899999999999999999999  9999999999998766554  665432   2234568


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEeCCCc---------------HHHH----HHHHHhCCCCeEEecCCcceeeeeeHH
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLVGEKA---------------PAAF----SRKAVTSTDNFEMWGDGKQTRSLTFID  238 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~---------------~~~~----~~~~~~~~~~~~i~~~~~~~~~~i~v~  238 (366)
                      |+.+|+++|+++..+.++++++++++|+..               ...+    ......++..+.+++++.+.++++|++
T Consensus       135 Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~  214 (315)
T d1e6ua_         135 YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD  214 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEee
Confidence            999999999999999999999999997321               1111    112222467788889999999999999


Q ss_pred             HHHHHHHHHHhcC----------CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCC-CCCcccccChHHHHHHcC
Q 044498          239 ECVEGVLRLIKSD----------FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGP-EGVRGRNSDDTLINEELG  307 (366)
Q Consensus       239 D~a~~~~~~l~~~----------~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~k~~~~lG  307 (366)
                      |+++++..++...          ....++++.+...++.++++.+.+..|.+..+.+.+.+ .+......|++|++ +||
T Consensus       215 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k-~Lg  293 (315)
T d1e6ua_         215 DMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLH-QLG  293 (315)
T ss_dssp             HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHH-HTT
T ss_pred             hhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHH-HcC
Confidence            9999999988552          45789999999999999999999999998777666543 44555678999996 699


Q ss_pred             CCCCCCHHHHHHHHHHHHHHH
Q 044498          308 WAPTMKQKDELRITYFWIKEQ  328 (366)
Q Consensus       308 ~~p~~~~~e~l~~~~~~~~~~  328 (366)
                      |.|+++++|+|+++++||++|
T Consensus       294 ~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         294 WYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHHc
Confidence            999999999999999999986

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=7e-39  Score=300.75  Aligned_cols=295  Identities=17%  Similarity=0.211  Sum_probs=230.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEEeCCCccc-----------------------cccccccce
Q 044498           23 KLRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIASDWNKNEH-----------------------MMEDMFCHE   78 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~~r~~~~~-----------------------~~~~~~~v~   78 (366)
                      .|||||||||||||++|+++|++ .|++         |+++++.....                       .......+.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~---------V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHS---------VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAA   72 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCE---------EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCE---------EEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceE
Confidence            36999999999999999999997 5899         99997522110                       011123468


Q ss_pred             EEEccCCChhHHHhhhc---CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           79 FHLVDLRVMDNCLRMTS---GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        79 ~~~~D~~~~~~l~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      ++.+|++|.+.+.++++   ++|+|||+|+.... .....++...+..|+.++.++++++++.+++  +++++||..+|+
T Consensus        73 ~~~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~--~~~~~~s~~~~~  149 (383)
T d1gy8a_          73 LEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLLHKCD--KIIFSSSAAIFG  149 (383)
T ss_dssp             EEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC--EEEEEEEGGGTB
T ss_pred             EEECcccCHHHhhhhhhccceeehhhcccccccc-cccccccccccccccccccccchhhhccCCc--cccccccccccc
Confidence            99999999999988875   67999999997653 2344566777899999999999999999999  999999999998


Q ss_pred             CCCCCCCCc---ccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC--------------------cHHHHH
Q 044498          156 EFKQLDTDV---KESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK--------------------APAAFS  212 (366)
Q Consensus       156 ~~~~~~~~~---~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~--------------------~~~~~~  212 (366)
                      .........   +..++.+..|.++|+.+|+.+|+++..+.+.++++++++|..                    .++.++
T Consensus       150 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii  229 (383)
T d1gy8a_         150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIIL  229 (383)
T ss_dssp             SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHH
T ss_pred             ccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHH
Confidence            765543211   112234778999999999999999999999999999998632                    122333


Q ss_pred             HHHHh---------------CCCCeEEec------CCcceeeeeeHHHHHHHHHHHHhcC----------CCCcEEecCC
Q 044498          213 RKAVT---------------STDNFEMWG------DGKQTRSLTFIDECVEGVLRLIKSD----------FREPLNIGSD  261 (366)
Q Consensus       213 ~~~~~---------------~~~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~----------~~~~~~i~~~  261 (366)
                      .+++.               .+.++.+++      ++.+.|+|+|++|+++++..+++..          .+++||++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~  309 (383)
T d1gy8a_         230 GRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS  309 (383)
T ss_dssp             HHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS
T ss_pred             HHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC
Confidence            33221               245556654      4678899999999999999988641          3578999999


Q ss_pred             CcccHHHHHHHHHHhcCCCCCCCcCCCCCC-CcccccChHHHHHHcCCCCCCCHHHHHHHH-HHHHHHHH
Q 044498          262 EMVSINEMAEIILSFENEKLPIHPIPGPEG-VRGRNSDDTLINEELGWAPTMKQKDELRIT-YFWIKEQV  329 (366)
Q Consensus       262 ~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~-~~~~~~~~  329 (366)
                      +++++.|+++.+.+..|.+.++...+.+.+ ......|++|++++|||+|+++++|+|+++ +.|++++.
T Consensus       310 ~~~s~~el~~~i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~  379 (383)
T d1gy8a_         310 RGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHP  379 (383)
T ss_dssp             CCEEHHHHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCT
T ss_pred             CceeHHHHHHHHHHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCc
Confidence            999999999999999999888777665544 455678999999999999999999999887 58888864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.2e-38  Score=293.39  Aligned_cols=291  Identities=21%  Similarity=0.263  Sum_probs=230.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc--C
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS--G   96 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~--~   96 (366)
                      ||||||||||||++|+++|+++|++         |+++++......      .....+++++.+|+++.+.+.++++  +
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~---------V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~   72 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGID---------LIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYM   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCE---------EEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcC
Confidence            7999999999999999999999999         999986433221      1123467999999999999999886  4


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccc-cCCCCCCCCC------------
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACI-YPEFKQLDTD------------  163 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~v-yg~~~~~~~~------------  163 (366)
                      +|+|||+|+.+.. .....++...+++|+.++.+|++++.+.+++  ++|++||... |+.....+..            
T Consensus        73 ~d~Vih~aa~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (338)
T d1orra_          73 PDSCFHLAGQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN--CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP  149 (338)
T ss_dssp             CSEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT--CEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred             CceEEeecccccc-cccccChHHHHHHHHHHHHHHHHhhhccccc--ccccccccccccccccccccccccccccccccc
Confidence            7999999997653 2334467888999999999999999999987  7766666544 4443332210            


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeC--------------CCcHHHHHHHHHh----CCCCeEEe
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG--------------EKAPAAFSRKAVT----STDNFEMW  225 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r--------------~~~~~~~~~~~~~----~~~~~~i~  225 (366)
                      ....+..+..|.+.|+.+|...|.++..+.+.+++...+++              ...+..++..++.    .++++.++
T Consensus       150 ~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (338)
T d1orra_         150 NGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTIS  229 (338)
T ss_dssp             TCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             cCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEe
Confidence            01122335678899999999999999999999888776663              1233556555543    36788999


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC---CCCcEEecC--CCcccHHHHHHHHHHhcCCCCCCCcCCCCC-CCcccccCh
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD---FREPLNIGS--DEMVSINEMAEIILSFENEKLPIHPIPGPE-GVRGRNSDD  299 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~  299 (366)
                      +++.+.++|+|++|+++++..++++.   .+++|++..  ++.+++.|+++.+.+..|.+.++...+.+. .......|+
T Consensus       230 g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~  309 (338)
T d1orra_         230 GNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADI  309 (338)
T ss_dssp             SSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCC
T ss_pred             CCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECH
Confidence            99999999999999999999998763   578999854  567899999999999999988777766543 345567799


Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHH
Q 044498          300 TLINEELGWAPTMKQKDELRITYFWIKE  327 (366)
Q Consensus       300 ~k~~~~lG~~p~~~~~e~l~~~~~~~~~  327 (366)
                      +|++++|||+|+++++++|+++++||++
T Consensus       310 ~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         310 KKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            9999999999999999999999999985

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-38  Score=300.13  Aligned_cols=310  Identities=15%  Similarity=0.126  Sum_probs=231.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc---------------cc--------ccccccceE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE---------------HM--------MEDMFCHEF   79 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~---------------~~--------~~~~~~v~~   79 (366)
                      +|||||||||||||++|+++|+++||+         |+++|+....               ..        .....++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~---------V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   71 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYE---------VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIEL   71 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCE---------EEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEE
Confidence            479999999999999999999999999         9999732110               00        011245799


Q ss_pred             EEccCCChhHHHhhhc--CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           80 HLVDLRVMDNCLRMTS--GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        80 ~~~D~~~~~~l~~~~~--~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      +.+|++|.+.+.++++  ++|+|||+|+..... .+..+   +..++..|+.++.+++++|++.+++ .+|+++||..+|
T Consensus        72 ~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~~i~~ss~~~~  149 (393)
T d1i24a_          72 YVGDICDFEFLAESFKSFEPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE-CHLVKLGTMGEY  149 (393)
T ss_dssp             EESCTTSHHHHHHHHHHHCCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEECCGGGG
T ss_pred             EEccCCCHHHHHHHHHhhcchheeccccccccc-cccccccccccccccccccccHHHHHHHHhccc-cceeeccccccc
Confidence            9999999999999987  589999999976422 22222   3456889999999999999998865 257888888888


Q ss_pred             CCCCCCCC----C-----cccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCC-------------------
Q 044498          155 PEFKQLDT----D-----VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEK-------------------  206 (366)
Q Consensus       155 g~~~~~~~----~-----~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~-------------------  206 (366)
                      +.......    +     ..+++..+..|.+.|+.+|+++|.++..+++.++++++++|+.                   
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~  229 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNR  229 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCC
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccc
Confidence            76543210    0     0112234678899999999999999999999999999998521                   


Q ss_pred             ---------cHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEe--cCCCcccHHHHHHHHH
Q 044498          207 ---------APAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-FREPLNI--GSDEMVSINEMAEIIL  274 (366)
Q Consensus       207 ---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i--~~~~~~s~~el~~~i~  274 (366)
                               .+..++.+... ++++.+++++.+.|+|+|++|+++++..++++. ..+.+++  .+++.+|+.|+++.|.
T Consensus       230 ~~~~~~~~~~i~~~~~~~~~-~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~  308 (393)
T d1i24a_         230 LDYDAVFGTALNRFCVQAAV-GHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVT  308 (393)
T ss_dssp             CCCSTTTCCHHHHHHHHHHH-TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHH
T ss_pred             cccccccccchhhhhHHhhc-CCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHH
Confidence                     24566777776 789999999999999999999999999999875 4455444  4567899999999988


Q ss_pred             Hhc---CCCCCCCcCCCC---CCCcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhhhc-CCceeeeccc
Q 044498          275 SFE---NEKLPIHPIPGP---EGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQ-GIDLSIYGSS  345 (366)
Q Consensus       275 ~~~---g~~~~~~~~~~~---~~~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~  345 (366)
                      +..   +...+....+.+   ........|++|++ +|||+|+++++++++++++|++++..+.... ..+...|.+.
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~LGw~P~~~~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~  385 (393)
T d1i24a_         309 KAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKI  385 (393)
T ss_dssp             HHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGGCCGGGSSCCCCTTTC
T ss_pred             HHHHhhCCCcceeeccCCCCCCCccEecCCHHHHH-HcCCccccCHHHHHHHHHHHHHHHHHhhhHhhcCCCCCCccc
Confidence            764   444444333322   22334567889986 5999999999999999999999976554442 3333345443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=1.2e-35  Score=275.55  Aligned_cols=294  Identities=16%  Similarity=0.092  Sum_probs=221.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      ++|||||||||||||++|++.|+++|++         |++++|........     ...+++++.+|++|++.+.++++ 
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~   77 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGAT---------VKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE   77 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhh
Confidence            6799999999999999999999999999         99999976643321     22368999999999999998876 


Q ss_pred             -CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCC
Q 044498           96 -GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP  174 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p  174 (366)
                       .+|+|+|+|+..+. ..+..++...+.+|+.++.++++++++.+.. ..++++||..+|+.... ..  ..+++.+..|
T Consensus        78 ~~~~~v~~~aa~~~~-~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~-~~~~~~s~~~~~~~~~~-~~--~~~~~~~~~p  152 (356)
T d1rkxa_          78 FQPEIVFHMAAQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRHVGGV-KAVVNITSDKCYDNKEW-IW--GYRENEAMGG  152 (356)
T ss_dssp             HCCSEEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC-CEEEEECCGGGBCCCCS-SS--CBCTTSCBCC
T ss_pred             chhhhhhhhhccccc-cccccCCccccccccccchhhhhhhhccccc-ccccccccccccccccc-cc--ccccccccCC
Confidence             68999999997642 2345677888999999999999999998755 14555555544444333 22  3334447889


Q ss_pred             CCchHHHHHHHHHHHHHHHHHc---------CCcEEEeCCC------------cHHHHHHHHHhCCCCeEEecCCcceee
Q 044498          175 QDAYGLEKLATEGLCKHYTKDF---------EIECRLVGEK------------APAAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       175 ~~~Y~~sK~~~E~~l~~~~~~~---------~~~~~i~r~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                      .++|+.+|...|..+..++..+         ++.++++|+.            .+..++.. .. +....+++.+.+.++
T Consensus       153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~-~~-~~~~~~~~~~~~~~~  230 (356)
T d1rkxa_         153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRA-FE-QSQPVIIRNPHAIRP  230 (356)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHH-HH-TTCCEECSCTTCEEC
T ss_pred             CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHH-Hh-CCCceEEeecccccc
Confidence            9999999999999998877643         5567676431            22334444 34 334456788899999


Q ss_pred             eeeHHHHHHHHHHHHhcC--C----CCcEEe--cCCCcccHHHHHHHHHHhcCCCCCCCcCCC--CCCCcccccChHHHH
Q 044498          234 LTFIDECVEGVLRLIKSD--F----REPLNI--GSDEMVSINEMAEIILSFENEKLPIHPIPG--PEGVRGRNSDDTLIN  303 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~--~----~~~~~i--~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~k~~  303 (366)
                      ++|++|++.++..++...  .    +...+.  ..+...++.++++.+.+..|....+.....  +.......+|++|++
T Consensus       231 ~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak  310 (356)
T d1rkxa_         231 WQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAK  310 (356)
T ss_dssp             CEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHH
T ss_pred             ccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHH
Confidence            999999999999888653  1    233333  345678999999999999998766544332  234555678999999


Q ss_pred             HHcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 044498          304 EELGWAPTMKQKDELRITYFWIKEQVEK  331 (366)
Q Consensus       304 ~~lG~~p~~~~~e~l~~~~~~~~~~~~~  331 (366)
                      ++|||+|+++++++|+++++||++....
T Consensus       311 ~~LGw~P~~~l~egi~~ti~wyk~~~~~  338 (356)
T d1rkxa_         311 MQLGWHPRWNLNTTLEYIVGWHKNWLSG  338 (356)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999986543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=6.4e-34  Score=254.99  Aligned_cols=263  Identities=16%  Similarity=0.166  Sum_probs=216.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      |||||||||||||++|+++|.++|++         |++++|..               +|+.|.+++.++++  ++|+||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~---------Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVE---------VIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEE---------EEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE---------EEEeechh---------------ccCCCHHHHHHHHHHcCCCEEE
Confidence            68999999999999999999999999         99998753               58999999999886  689999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |+|+.... ..+...+......|+....++.+.+.....   +++++||..+|+.....+.  .|.+  +..|.+.|+.+
T Consensus        58 h~a~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~~ss~~v~~~~~~~~~--~e~~--~~~~~~~~~~~  129 (281)
T d1vl0a_          58 NCAAHTAV-DKCEEQYDLAYKINAIGPKNLAAAAYSVGA---EIVQISTDYVFDGEAKEPI--TEFD--EVNPQSAYGKT  129 (281)
T ss_dssp             ECCCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC---EEEEEEEGGGSCSCCSSCB--CTTS--CCCCCSHHHHH
T ss_pred             eecccccc-ccccccchhhcccccccccccccccccccc---cccccccceeeeccccccc--cccc--cccchhhhhhh
Confidence            99997642 234455667788899999999999988776   6899999999988776653  5554  77899999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCC--------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCCC
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGE--------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR  253 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  253 (366)
                      |...|..++++    +.+++++|+        .....++..+.. +..+.+.+  ++.++++|++|+++++..++++...
T Consensus       130 k~~~e~~~~~~----~~~~~i~R~~~vyG~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~  202 (281)
T d1vl0a_         130 KLEGENFVKAL----NPKYYIVRTAWLYGDGNNFVKTMINLGKT-HDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY  202 (281)
T ss_dssp             HHHHHHHHHHH----CSSEEEEEECSEESSSSCHHHHHHHHHHH-CSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC
T ss_pred             hhHHHHHHHHh----CCCccccceeEEeCCCcccccchhhhhcc-CCceeecC--Cceeccchhhhhhhhhhhhhhhccc
Confidence            99999877654    788888864        334556666665 56666655  4789999999999999999999888


Q ss_pred             CcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC---C---CcccccChHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 044498          254 EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE---G---VRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK  326 (366)
Q Consensus       254 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---~---~~~~~~~~~k~~~~lG~~p~~~~~e~l~~~~~~~~  326 (366)
                      ++||+++++.+|+.|+++.+.+.+|.+.++..++...   .   +....+|++|+++++||.|+ +++++|+++++|+|
T Consensus       203 g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         203 GTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             EEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             CceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence            8999999999999999999999999987765543221   1   12235799999999999988 99999999999985

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-33  Score=253.55  Aligned_cols=278  Identities=17%  Similarity=0.191  Sum_probs=192.8

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHh------hhcCCC
Q 044498           26 ISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLR------MTSGVD   98 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~------~~~~~d   98 (366)
                      |||||||||||++|+++|+++|+ +         |+++++...........  +....|+.+.+.+..      .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~---------V~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITD---------ILVVDNLKDGTKFVNLV--DLNIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCC---------EEEEECCSSGGGGHHHH--TSCCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCe---------EEEEECCCCcchhhccc--ccchhhhccchHHHHHHhhhhcccchh
Confidence            89999999999999999999995 7         99987554432221111  222233333332222      224689


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCch
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAY  178 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y  178 (366)
                      +|+|+|+...   ....+.......|+.++.+++++++..+++   +|++||..+|+.....+.  .+++  +..|.+.|
T Consensus        71 ~i~~~aa~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~---~v~~ss~~~~~~~~~~~~--~~~~--~~~~~~~Y  140 (307)
T d1eq2a_          71 AIFHEGACSS---TTEWDGKYMMDNNYQYSKELLHYCLEREIP---FLYASSAATYGGRTSDFI--ESRE--YEKPLNVY  140 (307)
T ss_dssp             EEEECCSCCC---TTCCCHHHHHHHTHHHHHHHHHHHHHHTCC---EEEEEEGGGGTTCCSCBC--SSGG--GCCCSSHH
T ss_pred             hhhhhccccc---cccccccccccccccccccccccccccccc---cccccccccccccccccc--cccc--cccccccc
Confidence            9999998654   334566677888999999999999999985   777777777766554432  3433  56788999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEeCC---------------CcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHH
Q 044498          179 GLEKLATEGLCKHYTKDFEIECRLVGE---------------KAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       179 ~~sK~~~E~~l~~~~~~~~~~~~i~r~---------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  243 (366)
                      +.+|+.+|.++..++..++++++++|+               ..+..+...+..+.......+++...++|+|++|++++
T Consensus       141 ~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~  220 (307)
T d1eq2a_         141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (307)
T ss_dssp             HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             ccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHH
Confidence            999999999999999999999988852               12344445555433333445778888999999999999


Q ss_pred             HHHHHhcCCCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCCCCC-----CCcccccChHHHHHHcCCCCCCCHHHHH
Q 044498          244 VLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPE-----GVRGRNSDDTLINEELGWAPTMKQKDEL  318 (366)
Q Consensus       244 ~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~~~~~~~~~~k~~~~lG~~p~~~~~e~l  318 (366)
                      +..+++....+.||+++++.+|+.|+++.+.+..+. ..+...|.+.     .......|++|+++.+||+|+++++|+|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi  299 (307)
T d1eq2a_         221 NLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKK-GQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGV  299 (307)
T ss_dssp             HHHHHHHCCCEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHH
T ss_pred             HHHHhhhccccccccccccchhHHHHHHHHHHhcCC-CCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHH
Confidence            999999988899999999999999999999877653 3333333322     1233456999999999999999999999


Q ss_pred             HHHHHHH
Q 044498          319 RITYFWI  325 (366)
Q Consensus       319 ~~~~~~~  325 (366)
                      +++++|+
T Consensus       300 ~~~i~w~  306 (307)
T d1eq2a_         300 TEYMAWL  306 (307)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhC
Confidence            9999996

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=6.4e-33  Score=255.94  Aligned_cols=287  Identities=10%  Similarity=0.022  Sum_probs=205.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ..+++|||||||||||++|+++|+++|++         |+++.|+..+...        .......++.+|+.+.+.+..
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~---------V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   79 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYK---------VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE   79 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCE---------EEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhh
Confidence            35789999999999999999999999999         9999886532211        111122457799999999999


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCC-CCCCC-CCccc---
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPE-FKQLD-TDVKE---  166 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~-~~~~~-~~~~e---  166 (366)
                      ++.++|+|+|+++...    ...++...+..|+.++.+++++|.+. +++  +|||+||+.+++. ..... ....|   
T Consensus        80 ~~~~~~~v~~~a~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~--~~i~~SS~~~~~~~~~~~~~~~~~e~~~  153 (342)
T d1y1pa1          80 VIKGAAGVAHIASVVS----FSNKYDEVVTPAIGGTLNALRAAAATPSVK--RFVLTSSTVSALIPKPNVEGIYLDEKSW  153 (342)
T ss_dssp             TTTTCSEEEECCCCCS----CCSCHHHHHHHHHHHHHHHHHHHHTCTTCC--EEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred             hcccchhhhhhccccc----ccccccccccchhhhHHHHHHhhhcccccc--cccccccceeeccCCCCCCCcccccccc
Confidence            9999999999999754    23456677889999999999999987 588  9999999765432 22111 11111   


Q ss_pred             -----------ccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeC--------------CCcHHHHHHHHHhCC
Q 044498          167 -----------SEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVG--------------EKAPAAFSRKAVTST  219 (366)
Q Consensus       167 -----------~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r--------------~~~~~~~~~~~~~~~  219 (366)
                                 .+..+..|.++|+.+|..+|+++..+++.++  +++++++              ...+..++..++. +
T Consensus       154 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~-g  232 (342)
T d1y1pa1         154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFN-G  232 (342)
T ss_dssp             CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHT-T
T ss_pred             ccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHc-C
Confidence                       1223556778899999999999999988765  4444432              1234666777766 4


Q ss_pred             CCeEEecCCcceeeeeeHHHHHHHHHHHHhcC-CCCcEEecCCCcccHHHHHHHHHHhcCC-CCCCCcCCCCCCCc-ccc
Q 044498          220 DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD-FREPLNIGSDEMVSINEMAEIILSFENE-KLPIHPIPGPEGVR-GRN  296 (366)
Q Consensus       220 ~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~-~~~  296 (366)
                      ..... ..+.+.++|+|++|+|++++.+++++ .++.|++++++.+++.|++++|.+.++. ..+........... ...
T Consensus       233 ~~~~~-~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~  311 (342)
T d1y1pa1         233 EVSPA-LALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDT  311 (342)
T ss_dssp             CCCHH-HHTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECC
T ss_pred             CcCcc-cCCccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccc
Confidence            43333 23456689999999999999998875 5677888999999999999999998743 22221111111111 112


Q ss_pred             cChHHHHHHcCCCCCCCHHHHHHHHHHH
Q 044498          297 SDDTLINEELGWAPTMKQKDELRITYFW  324 (366)
Q Consensus       297 ~~~~k~~~~lG~~p~~~~~e~l~~~~~~  324 (366)
                      ....+..+.|||.|.++++++|+++++.
T Consensus       312 ~~s~~~~k~lg~~~~~~lee~i~d~I~s  339 (342)
T d1y1pa1         312 APSLEILKSLGRPGWRSIEESIKDLVGS  339 (342)
T ss_dssp             HHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred             hHHHHHHHHcCCCCCcCHHHHHHHHHHh
Confidence            2234445669999999999999999864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.98  E-value=8.5e-32  Score=242.75  Aligned_cols=269  Identities=13%  Similarity=0.124  Sum_probs=200.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d~vi  101 (366)
                      |||||||||||||++|++.|.++|+.         | ++++...           .+.+|++|.+.+.++++  ++|+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~---------v-~~~~~~~-----------~~~~Dl~~~~~~~~~i~~~~~D~Vi   59 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNL---------I-ALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIV   59 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEE---------E-EECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE---------E-EEECCCc-----------cccCcCCCHHHHHHHHHHcCCCEEE
Confidence            68999999999999999999998864         4 4444332           13479999999999886  689999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      ||||..+ +..+..++...+..|+.++.+|++++++.++   +++++||..+|+.....|.  .|+.  +..|.+.|+.+
T Consensus        60 h~Aa~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~ss~~~~~~~~~~~~--~E~~--~~~p~~~y~~~  131 (298)
T d1n2sa_          60 NAAAHTA-VDKAESEPELAQLLNATSVEAIAKAANETGA---WVVHYSTDYVFPGTGDIPW--QETD--ATSPLNVYGKT  131 (298)
T ss_dssp             ECCCCCC-HHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC---EEEEEEEGGGSCCCTTCCB--CTTS--CCCCSSHHHHH
T ss_pred             Eeccccc-ccccccCccccccccccccccchhhhhcccc---ccccccccccccCCCCCCC--cccc--ccCCCchHhhh
Confidence            9999764 3355667788899999999999999998886   6999999999987766553  5554  78899999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeC--------CCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhc---
Q 044498          182 KLATEGLCKHYTKDFEIECRLVG--------EKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS---  250 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~---  250 (366)
                      |..+|..+..+...    ..+++        .......+.+.+.....+.+.+  ...++++|++|+++++..+++.   
T Consensus       132 k~~~e~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~  205 (298)
T d1n2sa_         132 KLAGEKALQDNCPK----HLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALN  205 (298)
T ss_dssp             HHHHHHHHHHHCSS----EEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHhhhcc----cccccccceeeccCCccchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhc
Confidence            99999988765332    22221        1222333334444355555543  4678899999999999888753   


Q ss_pred             --CCCCcEEecCCCcccHHHHHHHHHHhcCC---CCCCCc---CCCCC------CCcccccChHHHHHHcCCCCCCCHHH
Q 044498          251 --DFREPLNIGSDEMVSINEMAEIILSFENE---KLPIHP---IPGPE------GVRGRNSDDTLINEELGWAPTMKQKD  316 (366)
Q Consensus       251 --~~~~~~~i~~~~~~s~~el~~~i~~~~g~---~~~~~~---~~~~~------~~~~~~~~~~k~~~~lG~~p~~~~~e  316 (366)
                        ...++||+++++.++..++++.+.+..+.   ......   .+...      .+....+|++|+++.|||+|+ ++++
T Consensus       206 ~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~  284 (298)
T d1n2sa_         206 KPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWEL  284 (298)
T ss_dssp             CGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHH
T ss_pred             cccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCC-cHHH
Confidence              25789999999999999999988765532   222111   11100      012336799999999999998 9999


Q ss_pred             HHHHHHHHHHHH
Q 044498          317 ELRITYFWIKEQ  328 (366)
Q Consensus       317 ~l~~~~~~~~~~  328 (366)
                      +|+++++++.++
T Consensus       285 gl~~~i~~~~~~  296 (298)
T d1n2sa_         285 GVKRMLTEMFTT  296 (298)
T ss_dssp             HHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhh
Confidence            999999998753

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.4e-27  Score=200.73  Aligned_cols=199  Identities=11%  Similarity=0.014  Sum_probs=158.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .|+||+||||||+||++++++|+++|++         |+++.|++.+.......+++++.+|++|.+++.++++++|+||
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~---------V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi   72 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYE---------VTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVI   72 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCE---------EEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEE
Confidence            6789999999999999999999999999         9999998877655555678999999999999999999999999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      |++|...        .......+..++.++++++++++++  |||++||..+|++....+           .....|...
T Consensus        73 ~~~g~~~--------~~~~~~~~~~~~~~l~~aa~~~~v~--r~i~~ss~~~~~~~~~~~-----------~~~~~~~~~  131 (205)
T d1hdoa_          73 VLLGTRN--------DLSPTTVMSEGARNIVAAMKAHGVD--KVVACTSAFLLWDPTKVP-----------PRLQAVTDD  131 (205)
T ss_dssp             ECCCCTT--------CCSCCCHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSCTTCSC-----------GGGHHHHHH
T ss_pred             EEeccCC--------chhhhhhhHHHHHHHHHHHHhcCCC--eEEEEeeeeccCCCcccc-----------ccccccchH
Confidence            9998532        2223356788999999999999999  999999998887654432           123457888


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC--CCCcEEec
Q 044498          182 KLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIG  259 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~  259 (366)
                      |..+|+++++    .+++++++|+..+..   .  .......+..++.....+++++|+|++++.+++++  .++.+.++
T Consensus       132 ~~~~e~~l~~----~~~~~tiirp~~~~~---~--~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         132 HIRMHKVLRE----SGLKYVAVMPPHIGD---Q--PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             HHHHHHHHHH----TCSEEEEECCSEEEC---C--CCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             HHHHHHHHHh----cCCceEEEecceecC---C--CCcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence            8888887653    599999999875521   1  11233455556666778999999999999999876  46666654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=1.6e-26  Score=209.03  Aligned_cols=229  Identities=15%  Similarity=0.117  Sum_probs=174.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++||||||||||||++|+++|+++||+         |++++|+......        ....+++++.+|+.+.+.+.+.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~---------V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~   72 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHP---------TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA   72 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCC---------EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE---------EEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhh
Confidence            5788999999999999999999999999         9999997653221        1234689999999999999999


Q ss_pred             hcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498           94 TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus        94 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                      +.+++.++++++...            ...|..++.++++++.+.+..  +++++||.++++.....          +..
T Consensus        73 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~a~~~~~~--~~v~~Ss~g~~~~~~~~----------~~~  128 (312)
T d1qyda_          73 LKQVDVVISALAGGV------------LSHHILEQLKLVEAIKEAGNI--KRFLPSEFGMDPDIMEH----------ALQ  128 (312)
T ss_dssp             HTTCSEEEECCCCSS------------SSTTTTTHHHHHHHHHHSCCC--SEEECSCCSSCTTSCCC----------CCS
T ss_pred             ccCcchhhhhhhhcc------------cccchhhhhHHHHHHHHhcCC--cEEEEeeccccCCCccc----------ccc
Confidence            999999999988432            234667778899999999877  88998886554433221          344


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHH--------HhCCCCeEEecCCcceeeeeeHHHHHHHHH
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKA--------VTSTDNFEMWGDGKQTRSLTFIDECVEGVL  245 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~--------~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~  245 (366)
                      |...|...+...+.    +....+++++++|+..+.......        ......+.+++++++.++|+|++|+|++++
T Consensus       129 ~~~~~~~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  204 (312)
T d1qyda_         129 PGSITFIDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  204 (312)
T ss_dssp             STTHHHHHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHH----hhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHH
Confidence            55666666665554    455668999999877654433221        112455667788999999999999999999


Q ss_pred             HHHhcC--CCCc-EEecCCCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          246 RLIKSD--FREP-LNIGSDEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       246 ~~l~~~--~~~~-~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      .++.++  .++. |++++++.+|+.|+++.+.+++|++.++...|
T Consensus       205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~  249 (312)
T d1qyda_         205 KSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS  249 (312)
T ss_dssp             HHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred             HHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECC
Confidence            999775  3555 56666778999999999999999987665554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-25  Score=193.67  Aligned_cols=196  Identities=12%  Similarity=0.018  Sum_probs=149.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++++|||||||||||++|+++|+++|.  +         |++++|++..........++...+|+.+.+.+.++++++|+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~---------v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~   83 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSK---------VTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDV   83 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSE---------EEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCE---------EEEEecChhhhcccccceeeeeeeccccccccccccccccc
Confidence            557899999999999999999999984  7         99999987655444455678899999999999999999999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchH
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYG  179 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~  179 (366)
                      +||+++..    ....+...+..+|+.++.+++++|.+.+++  +|||+||..+++.                 +.+.|+
T Consensus        84 vi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~--~fi~~Ss~~~~~~-----------------~~~~Y~  140 (232)
T d2bkaa1          84 GFCCLGTT----RGKAGAEGFVRVDRDYVLKSAELAKAGGCK--HFNLLSSKGADKS-----------------SNFLYL  140 (232)
T ss_dssp             EEECCCCC----HHHHHHHHHHHHHTHHHHHHHHHHHHTTCC--EEEEECCTTCCTT-----------------CSSHHH
T ss_pred             cccccccc----ccccchhhhhhhcccccceeeecccccCcc--ccccCCccccccC-----------------ccchhH
Confidence            99999854    233455677889999999999999999999  9999999766432                 346799


Q ss_pred             HHHHHHHHHHHHHHHHcCCc-EEEeCCCcH----------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHH
Q 044498          180 LEKLATEGLCKHYTKDFEIE-CRLVGEKAP----------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI  248 (366)
Q Consensus       180 ~sK~~~E~~l~~~~~~~~~~-~~i~r~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l  248 (366)
                      .+|..+|..+.++    +++ ++|+|+..+          ..++...+.      ...........++++|+|++++.++
T Consensus       141 ~~K~~~E~~l~~~----~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~~I~~~dvA~a~i~~~  210 (232)
T d2bkaa1         141 QVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFG------SLPDSWASGHSVPVVTVVRAMLNNV  210 (232)
T ss_dssp             HHHHHHHHHHHTT----CCSEEEEEECCEEECTTGGGSHHHHHHHHHHC------SCCTTGGGGTEEEHHHHHHHHHHHH
T ss_pred             HHHHHhhhccccc----cccceEEecCceeecCCCcCcHHHHHHHHHhh------ccCCcccCCCeEEHHHHHHHHHHHH
Confidence            9999999877654    664 888886532          112222222      1122333345699999999999888


Q ss_pred             hcC-CCCcEEec
Q 044498          249 KSD-FREPLNIG  259 (366)
Q Consensus       249 ~~~-~~~~~~i~  259 (366)
                      ..+ .++.+.+.
T Consensus       211 ~~~~~~~~~i~~  222 (232)
T d2bkaa1         211 VRPRDKQMELLE  222 (232)
T ss_dssp             TSCCCSSEEEEE
T ss_pred             hcCccCCeEEEc
Confidence            776 45555554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.92  E-value=1.8e-24  Score=194.49  Aligned_cols=224  Identities=13%  Similarity=0.119  Sum_probs=167.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------ccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .++||||||||||||++++++|+++|++         |++++|........         ...+++++.+|+.+...+.+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~---------V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   72 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHP---------TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVE   72 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCC---------EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCe---------EEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhh
Confidence            4678999999999999999999999999         99999976543211         23467899999999999999


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCC
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA  172 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~  172 (366)
                      .+++++.++|+++..                +..++.++++++...+++  ++++.||...+.....           ..
T Consensus        73 ~~~~~~~vi~~~~~~----------------~~~~~~~~~~a~~~~~~~--~~~~~s~~~~~~~~~~-----------~~  123 (307)
T d1qyca_          73 AVKNVDVVISTVGSL----------------QIESQVNIIKAIKEVGTV--KRFFPSEFGNDVDNVH-----------AV  123 (307)
T ss_dssp             HHHTCSEEEECCCGG----------------GSGGGHHHHHHHHHHCCC--SEEECSCCSSCTTSCC-----------CC
T ss_pred             hhhhceeeeeccccc----------------ccchhhHHHHHHHHhccc--cceeeecccccccccc-----------cc
Confidence            999999999998843                345667888999999988  8898887543322111           22


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHH-------hCCCCeEEecCCcceeeeeeHHHHHHHHH
Q 044498          173 EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAV-------TSTDNFEMWGDGKQTRSLTFIDECVEGVL  245 (366)
Q Consensus       173 ~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~i~v~D~a~~~~  245 (366)
                      .+...+...+...+.    +....+++++++|+..+.......+       .++....+++.+++.++|+|++|+|++++
T Consensus       124 ~~~~~~~~~~~~~~~----~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  199 (307)
T d1qyca_         124 EPAKSVFEVKAKVRR----AIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI  199 (307)
T ss_dssp             TTHHHHHHHHHHHHH----HHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             ccccccccccccccc----hhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHH
Confidence            223334444444444    4455699999998776543322111       12445667788999999999999999999


Q ss_pred             HHHhcC--CCC-cEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          246 RLIKSD--FRE-PLNIGSDEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       246 ~~l~~~--~~~-~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      .+++++  .++ .|++++++.+|+.|+++.+.+++|.+.++...|
T Consensus       200 ~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~  244 (307)
T d1qyca_         200 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP  244 (307)
T ss_dssp             TTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred             HHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECC
Confidence            999875  344 456677889999999999999999987665544

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=5.2e-23  Score=178.91  Aligned_cols=229  Identities=11%  Similarity=0.043  Sum_probs=156.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .|++|||||||||||++++++|+++|++       +.|+.+.|++.... ....+++++.+|+++.+.+.++++++|.||
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~-------v~v~~~~R~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   73 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDK-------FVAKGLVRSAQGKE-KIGGEADVFIGDITDADSINPAFQGIDALV   73 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTT-------CEEEEEESCHHHHH-HTTCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCc-------EEEEEEcCCHHHHH-hccCCcEEEEeeeccccccccccccceeeE
Confidence            4789999999999999999999999986       11445566554322 223467999999999999999999999999


Q ss_pred             EcccccCCcc------------ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccC
Q 044498          102 NLAADMGGMG------------FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus       102 ~~a~~~~~~~------------~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      |+|+......            ...........+|+.++.+++..+.....+  ++.+.|+...+......         
T Consensus        74 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~---------  142 (252)
T d2q46a1          74 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK--HIVVVGSMGGTNPDHPL---------  142 (252)
T ss_dssp             ECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS--EEEEEEETTTTCTTCGG---------
T ss_pred             EEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccccc--ccccccccccCCCCccc---------
Confidence            9998654211            111223445778899999999999999988  89998886554432211         


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHHHHHHhCCCCeEEec---CCcceeeeeeHHHHHHHHHH
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSRKAVTSTDNFEMWG---DGKQTRSLTFIDECVEGVLR  246 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~i~v~D~a~~~~~  246 (366)
                       ...+...|...+...+    .+....+++++++|+..+..-.    ..........   -.....+++|++|+|++++.
T Consensus       143 -~~~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~  213 (252)
T d2q46a1         143 -NKLGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKE----GGVRELLVGKDDELLQTDTKTVPRADVAEVCIQ  213 (252)
T ss_dssp             -GGGGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSC----TTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHH
T ss_pred             -ccccccchhhhhhhhh----hhhhcccccceeecceEEECCC----cchhhhhhccCcccccCCCCeEEHHHHHHHHHH
Confidence             1122334555544433    4456679999999865331100    0011111111   11233579999999999999


Q ss_pred             HHhcC--CCCcEEecCC---CcccHHHHHHHHHHhcC
Q 044498          247 LIKSD--FREPLNIGSD---EMVSINEMAEIILSFEN  278 (366)
Q Consensus       247 ~l~~~--~~~~~~i~~~---~~~s~~el~~~i~~~~g  278 (366)
                      +++++  .+++||++++   ...++.++.+++.++.+
T Consensus       214 ~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         214 ALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             HTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             HhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            99875  5789999863   35677788877766554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.86  E-value=2.1e-21  Score=178.69  Aligned_cols=224  Identities=12%  Similarity=0.045  Sum_probs=162.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhH-HHhhhcCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDN-CLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~-l~~~~~~~   97 (366)
                      ++++|||||||||||++|+++|+++|++         |+++.|+......   ....+++++.+|+.|..+ +..++.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~---------V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~   72 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH---------VRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA   72 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC---------EEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe---------EEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCC
Confidence            5688999999999999999999999999         9999997654321   123468999999998654 66778899


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA  177 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~  177 (366)
                      +++++.....             ...++..+.++++++.+.+++  +++++||.......             ...+...
T Consensus        73 ~~~~~~~~~~-------------~~~~~~~~~~~~~aa~~agv~--~~v~~Ss~~~~~~~-------------~~~~~~~  124 (350)
T d1xgka_          73 HLAFINTTSQ-------------AGDEIAIGKDLADAAKRAGTI--QHYIYSSMPDHSLY-------------GPWPAVP  124 (350)
T ss_dssp             SEEEECCCST-------------TSCHHHHHHHHHHHHHHHSCC--SEEEEEECCCGGGT-------------SSCCCCT
T ss_pred             ceEEeecccc-------------cchhhhhhhHHHHHHHHhCCC--ceEEEeeccccccC-------------Ccccchh
Confidence            9988775522             123677889999999999988  89999986433221             2233455


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEeCCCcHHHHH-H--------HHHhCC-CCeEEecCCcceeeeeeH-HHHHHHHHH
Q 044498          178 YGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFS-R--------KAVTST-DNFEMWGDGKQTRSLTFI-DECVEGVLR  246 (366)
Q Consensus       178 Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~~~~~-~--------~~~~~~-~~~~i~~~~~~~~~~i~v-~D~a~~~~~  246 (366)
                      |..+|...+..+.    ..+++++++|+..+...+ .        .....+ .....+.+++..+.++++ +|+++++..
T Consensus       125 ~~~~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         125 MWAPKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             TTHHHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHH----hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHH
Confidence            7788887776544    447889888755432110 0        001111 122334456677788876 899999999


Q ss_pred             HHhcC----CCCcEEecCCCcccHHHHHHHHHHhcCCCCCCCcCC
Q 044498          247 LIKSD----FREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP  287 (366)
Q Consensus       247 ~l~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~  287 (366)
                      ++...    .++.|++++ +.+|+.|+++.+.+++|++..+..+|
T Consensus       201 ~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp  244 (350)
T d1xgka_         201 IFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP  244 (350)
T ss_dssp             HHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred             HHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECC
Confidence            98653    478899886 67999999999999999987665555

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=5.5e-22  Score=169.55  Aligned_cols=193  Identities=10%  Similarity=-0.024  Sum_probs=133.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-cCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-SGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-~~~d~vi  101 (366)
                      .+||||||||||||++|+++|+++|+.       ..|+++.|.+....       ..+..+..|..++...+ ..+|+||
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~-------~~v~~~~r~~~~~~-------~~~~~~~~d~~~~~~~~~~~~d~vi   67 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTL-------AKVIAPARKALAEH-------PRLDNPVGPLAELLPQLDGSIDTAF   67 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTC-------CEEECCBSSCCCCC-------TTEECCBSCHHHHGGGCCSCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCe-------EEEEEEeCCchhhc-------ccccccccchhhhhhccccchheee
Confidence            479999999999999999999999974       01666666543221       23345555655555544 4689999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHH
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLE  181 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~s  181 (366)
                      ||+|...   ....+...+...|+.++.+++++|+..+++  +|||+||..+++.                 +.+.|+.+
T Consensus        68 ~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~--~~i~~Ss~~~~~~-----------------~~~~y~~~  125 (212)
T d2a35a1          68 CCLGTTI---KEAGSEEAFRAVDFDLPLAVGKRALEMGAR--HYLVVSALGADAK-----------------SSIFYNRV  125 (212)
T ss_dssp             ECCCCCH---HHHSSHHHHHHHHTHHHHHHHHHHHHTTCC--EEEEECCTTCCTT-----------------CSSHHHHH
T ss_pred             eeeeeec---cccccccccccchhhhhhhccccccccccc--ccccccccccccc-----------------cccchhHH
Confidence            9998642   334455678889999999999999999999  9999999766542                 24579999


Q ss_pred             HHHHHHHHHHHHHHcCC-cEEEeCCCcHHHH-----HHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcCCCCc
Q 044498          182 KLATEGLCKHYTKDFEI-ECRLVGEKAPAAF-----SRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREP  255 (366)
Q Consensus       182 K~~~E~~l~~~~~~~~~-~~~i~r~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  255 (366)
                      |..+|+.+.+    .++ +++|+|+..+..-     +...+. .....+. .  .....+|++|+|+++..+++++..+.
T Consensus       126 K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~~~~~~~-~~~~~~~-~--~~~~~i~v~DvA~ai~~~~~~~~~g~  197 (212)
T d2a35a1         126 KGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAEILA-APIARIL-P--GKYHGIEACDLARALWRLALEEGKGV  197 (212)
T ss_dssp             HHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGGGTT-CCCC-------CHHHHHHHHHHHHHHHHHHTCCCSEE
T ss_pred             HHHHhhhccc----cccccceeeCCcceeCCcccccHHHHHH-HHHhhcc-C--CCCcEEEHHHHHHHHHHHHcCCCCCC
Confidence            9999987754    366 5899987654210     000111 1111111 1  12345999999999999998876666


Q ss_pred             EEec
Q 044498          256 LNIG  259 (366)
Q Consensus       256 ~~i~  259 (366)
                      ..+.
T Consensus       198 ~~~~  201 (212)
T d2a35a1         198 RFVE  201 (212)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5544

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=4.7e-18  Score=147.98  Aligned_cols=218  Identities=19%  Similarity=0.137  Sum_probs=153.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------   95 (366)
                      +++++|||||++.||.++++.|.++|++         |++.+|+.+........+..++.+|+++.+++.++++      
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~---------V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGAL---------VALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            6789999999999999999999999999         9999998764433333456889999999988777653      


Q ss_pred             -CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 -GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 -~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                       ++|++||+||..........+   .+..+++|+.++.++.+++.+    .+-.  ++|++||...+-.           
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G--~Ii~isS~~~~~~-----------  141 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG--AIVNVASVQGLFA-----------  141 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE--EEEEECCGGGTSB-----------
T ss_pred             CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccc--ccccccccccccc-----------
Confidence             699999999976543333333   344588999998888887754    3333  8999999754321           


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EE---ecCCcceeeeeeHHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EM---WGDGKQTRSLTFIDE  239 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i---~~~~~~~~~~i~v~D  239 (366)
                          ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+........... ..   ..+......+...+|
T Consensus       142 ----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ped  217 (248)
T d2d1ya1         142 ----EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEE  217 (248)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHH
T ss_pred             ----ccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHH
Confidence                1234579999999999999988875   677776655433 33443333211110 00   111122234678999


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      +++++.+++...    .++++.+.+|-..|
T Consensus       218 ia~~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         218 VAEAVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            999999998542    58899998886544

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.76  E-value=2.7e-18  Score=148.49  Aligned_cols=210  Identities=15%  Similarity=0.089  Sum_probs=142.7

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc----
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      +.+++++|||||++.||+++++.|+++|++         |++.+|+.....     .+..+.+|++|++++.++++    
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHK---------VAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCcchhc-----CceEEEEecCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999         999998765432     34788999999988777653    


Q ss_pred             ---CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHH----HHcCCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 ---GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAA----RMNGVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~----~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                         ++|++||+||..........+.   +..+++|+.++..+.+++    ++.+..  ++|++||......         
T Consensus        70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g--~Iv~isS~~~~~~---------  138 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG--RMIFIGSVSGLWG---------  138 (237)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCCCC------------
T ss_pred             hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCC--ceEEEcchhhccC---------
Confidence               6999999999765433333333   445889999987766544    445555  8999999654321         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                            ......|+.+|.+.+.+.+.++.++   |+++..+.++.+ ..+.....+.... .. ........+...+|+|
T Consensus       139 ------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~-~~-~~~~pl~R~~~pedvA  210 (237)
T d1uzma1         139 ------IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQ-GA-LQFIPAKRVGTPAEVA  210 (237)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHH-HH-GGGCTTCSCBCHHHHH
T ss_pred             ------CcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHH-HH-HhcCCCCCCcCHHHHH
Confidence                  1224579999999999999988875   677766654433 2222211000000 00 0001122356799999


Q ss_pred             HHHHHHHhcC----CCCcEEecCCC
Q 044498          242 EGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       242 ~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +++.+++...    .++++.+.+|-
T Consensus       211 ~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         211 GVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhCchhcCCcCCeEEECCCC
Confidence            9999998542    58899998774

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=4.4e-18  Score=147.68  Aligned_cols=214  Identities=17%  Similarity=0.140  Sum_probs=148.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCChhHHHhhhc---C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRVMDNCLRMTS---G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~~~~l~~~~~---~   96 (366)
                      ++|++|||||++.||++++++|.++|++         |++++|+..+...  ....++..+.+|++++++++++++   +
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~   74 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAK---------VVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGP   74 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCC
Confidence            6789999999999999999999999999         9999987653221  123357899999999999988875   6


Q ss_pred             CCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc-----CCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           97 VDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN-----GVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~-----~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      +|++||+||..........+.   +..+++|+.+...+.+++.+.     ...  ++|++||...+...           
T Consensus        75 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g--~ii~isS~~~~~~~-----------  141 (242)
T d1cyda_          75 VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG--SIVNVSSMVAHVTF-----------  141 (242)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCGGGTSCC-----------
T ss_pred             CeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccC--cccccchhhccccC-----------
Confidence            899999999765433333333   344889999988888765432     233  79999997543321           


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEecCCcceeeeeeHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMWGDGKQTRSLTFIDECVEG  243 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~i~v~D~a~~  243 (366)
                          .....|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+...... .... ...........+...+|+|++
T Consensus       142 ----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~pl~R~~~peeva~~  216 (242)
T d1cyda_         142 ----PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA-DPEFARKLKERHPLRKFAEVEDVVNS  216 (242)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC-CHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             ----CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC-CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                124579999999999999998875   677766644433 333332221 0000 000000112235679999999


Q ss_pred             HHHHHhcC----CCCcEEecCCC
Q 044498          244 VLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       244 ~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +..++...    .++++.+.+|.
T Consensus       217 v~fL~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         217 ILFLLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHHHHSGGGTTCCSSEEEESTTG
T ss_pred             HHHHhCchhcCcCCceEEeCcch
Confidence            99998542    58899998774

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.75  E-value=2.4e-17  Score=143.44  Aligned_cols=215  Identities=15%  Similarity=0.014  Sum_probs=146.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      +++.+|||||++.||+++++.|.++|++         |++.+|++.+..    ......+.++.+|+++++++.++++  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~---------V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~   74 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGAD---------IAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQV   74 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999         999998765322    1123356789999999998877653  


Q ss_pred             -----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|++||+||..........+   .+..+++|+.+...+.+++.+    .+-.  ++|++||......       
T Consensus        75 ~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G--~Iv~isS~~~~~~-------  145 (247)
T d2ew8a1          75 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG--RIINLTSTTYWLK-------  145 (247)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGGSC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCC--Cccccccchhccc-------
Confidence                 699999999986543333333   344588999998888776643    4444  8999999754321       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                              ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+..........-...........+...+|
T Consensus       146 --------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~ped  217 (247)
T d2ew8a1         146 --------IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLD  217 (247)
T ss_dssp             --------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHH
T ss_pred             --------CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHH
Confidence                    1224579999999999999988875   677777755543 3333322221111011111112234667899


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      +|++++.++...    .|+++.+.+|.
T Consensus       218 vA~~v~fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         218 LTGAAAFLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECCCE
Confidence            999999998542    58889988774

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.75  E-value=3.5e-17  Score=141.92  Aligned_cols=205  Identities=13%  Similarity=0.052  Sum_probs=146.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-cccccceEEEccCCChhHHHhhhc-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-EDMFCHEFHLVDLRVMDNCLRMTS-----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-~~~~~v~~~~~D~~~~~~l~~~~~-----   95 (366)
                      +++++|||||++.||.++++.|.++|++         |++.+|+...... ....++.++.+|++++++++++++     
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGAR---------LVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999         9999997653221 123456899999999998887653     


Q ss_pred             --CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCCCCccc
Q 044498           96 --GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLDTDVKE  166 (366)
Q Consensus        96 --~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~~~~~e  166 (366)
                        ++|++||+||..........+   .+..+++|+.+...+.+++.+.    +..  +++.+||....+           
T Consensus        75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~--~i~~~ss~~~~~-----------  141 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG--SIVLTASRVYLG-----------  141 (242)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE--EEEEECCGGGGC-----------
T ss_pred             cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccc--eeeeeccccccC-----------
Confidence              699999999976543333333   3445889999998888877653    333  677777753322           


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          167 SEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       167 ~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                           ..+...|+.+|...+.+.+.++.++   |+++..+.|+.+         ..+...... ..+         ...+
T Consensus       142 -----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~-~~p---------l~R~  206 (242)
T d1ulsa_         142 -----NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIA-ATP---------LGRA  206 (242)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHH-TCT---------TCSC
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHh-cCC---------CCCC
Confidence                 1235579999999999999988876   677766633222         233333333 221         1224


Q ss_pred             eeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          235 TFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ...+|+|+++..++...    .++++.+.+|..
T Consensus       207 ~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         207 GKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            56899999999998542    688999988764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.2e-17  Score=145.12  Aligned_cols=215  Identities=15%  Similarity=0.092  Sum_probs=147.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCChhHHHhhhc---C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRVMDNCLRMTS---G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~~~~l~~~~~---~   96 (366)
                      +++++|||||++.||.++++.|.++|++         |++++|+..+...  ....++..+.+|++|.++++++++   +
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~---------V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~   76 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGAR---------VVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGP   76 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence            6789999999999999999999999999         9999997654221  122356889999999999888775   6


Q ss_pred             CCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH-----cCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           97 VDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM-----NGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~-----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      +|++||+||..........+.   ...+++|+.++..+.+++.+     .+..  ++|++||......            
T Consensus        77 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g--~Ii~isS~~~~~~------------  142 (244)
T d1pr9a_          77 VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG--AIVNVSSQCSQRA------------  142 (244)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE--EEEEECCGGGTSC------------
T ss_pred             ceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcc--eEeeccccccccc------------
Confidence            899999999865433333333   34588999998877776543     2233  8999999754322            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                         ......|+.+|...+.+.+.++.++   ++++..+.|+.+ ..+............-..+......+...+|+|+++
T Consensus       143 ---~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v  219 (244)
T d1pr9a_         143 ---VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI  219 (244)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             ---ccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence               1224579999999999999998875   677777744433 222211110000000000111122367799999999


Q ss_pred             HHHHhcC----CCCcEEecCCC
Q 044498          245 LRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       245 ~~~l~~~----~~~~~~i~~~~  262 (366)
                      ..++...    .++++.+.+|.
T Consensus       220 ~fL~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         220 LFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCcCCcEEEECccH
Confidence            9998542    58889988764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=3.7e-18  Score=148.28  Aligned_cols=213  Identities=14%  Similarity=0.049  Sum_probs=147.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      ++++++||||++.||+++++.|.++|++         |++.+|+......   .....+..+.+|++++++++++++   
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~---------Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   73 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAK---------VIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIR   73 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhh
Confidence            5789999999999999999999999999         9999987653221   112345788999999988777653   


Q ss_pred             ----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||..........+.   ...+++|+.++..+.+++.+    .+-.  ++|++||...+-.        
T Consensus        74 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G--~II~isS~~~~~~--------  143 (243)
T d1q7ba_          74 AEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHG--RIITIGSVVGTMG--------  143 (243)
T ss_dssp             HHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHHC--------
T ss_pred             cccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCC--EeeeecchhhcCC--------
Confidence                6999999999775443333333   34488999998888877643    3444  8999999654321        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                             ......|+.+|.+.+.+.+.++.++   |+++..+.|+.+ ..+....... ..-.+ ........+...+|+
T Consensus       144 -------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~-~~~~pl~R~~~pedv  214 (243)
T d1q7ba_         144 -------NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD-QRAGI-LAQVPAGRLGGAQEI  214 (243)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-HHHHH-HTTCTTSSCBCHHHH
T ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh-HHHHH-HhcCCCCCCCCHHHH
Confidence                   1224579999999999999988875   677777755433 2222111100 00000 011112235679999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCC
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      |.++.+++...    .++++++.+|.
T Consensus       215 A~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         215 ANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHhCchhcCCcCCeEEECCCe
Confidence            99999998542    68899998774

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.73  E-value=4.2e-17  Score=142.25  Aligned_cols=214  Identities=15%  Similarity=0.122  Sum_probs=149.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||++-||.+++++|+++|++         |++.+|+..+...   .....+.++.+|++++++++++++   
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   74 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGAR---------VVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR   74 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999         9999997653221   122346899999999988877653   


Q ss_pred             ----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||..........+.   ...+++|+.++..+.+++.+    .+-.  ++|++||..-+..        
T Consensus        75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G--~II~isS~~~~~~--------  144 (254)
T d1hdca_          75 EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG--SIVNISSAAGLMG--------  144 (254)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC--------
T ss_pred             HHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCC--eecccccchhccc--------
Confidence                6999999999875433333333   34588999998888776643    3444  8999999754321        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeee-eeHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSL-TFIDE  239 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~-i~v~D  239 (366)
                             ......|+.+|...+.+.+.++.++   ++++..+.++.+ ..+.......... ... .......+ +..+|
T Consensus       145 -------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~-~~~-~~~pl~R~g~~Ped  215 (254)
T d1hdca_         145 -------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE-GNY-PNTPMGRVGNEPGE  215 (254)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST-TSC-TTSTTSSCB-CHHH
T ss_pred             -------ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHH-HHH-hCCCCCCCCCCHHH
Confidence                   1225579999999999999998875   677777755433 4444443321111 111 11111122 35799


Q ss_pred             HHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          240 CVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       240 ~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      +|.++..++...    .++++.+.+|..
T Consensus       216 vA~~v~fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         216 IAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence            999999998542    588999988753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.73  E-value=2.8e-17  Score=144.25  Aligned_cols=216  Identities=13%  Similarity=0.063  Sum_probs=145.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      .+++++|||||++.||.+++++|+++|++         |++.+|+......        .....+.++.+|+++++++.+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~---------V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~   72 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---------IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            36789999999999999999999999999         9999987543211        122356788999999998887


Q ss_pred             hhc-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      +++       ++|++||+||..........+.   ...+++|+.+...+.+++.    +.+-.  ++|++||......  
T Consensus        73 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G--~Iv~isS~~~~~~--  148 (260)
T d1x1ta1          73 LVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG--RIINIASAHGLVA--  148 (260)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC--
T ss_pred             HHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCc--eEeecccccceec--
Confidence            653       6999999999875433333333   4458899998877766654    34444  8999999754321  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCC---CCe-------EE
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTST---DNF-------EM  224 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~---~~~-------~i  224 (366)
                                   ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+........   ...       ..
T Consensus       149 -------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  215 (260)
T d1x1ta1         149 -------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAREL  215 (260)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------C
T ss_pred             -------------cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHH
Confidence                         1224579999999999999998875   567766644432 22222222100   000       00


Q ss_pred             ecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          225 WGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       225 ~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .........+...+|+|+++.+++...    .++++.+.+|-
T Consensus       216 ~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         216 LSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence            001111234678999999999998542    58899998774

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.73  E-value=1.5e-17  Score=145.01  Aligned_cols=207  Identities=10%  Similarity=-0.020  Sum_probs=145.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||++.||+++++.|+++|++         |++.+|+..+...       .....+.++.+|+++++++.+++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCS---------VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            6789999999999999999999999999         9999987653211       11234578899999998877765


Q ss_pred             c-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||..........+.   +..+++|+.++..+.+++.+    .+-.  ++|++||......    
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G--~Ii~i~S~~~~~~----  148 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP--SIINIGSLTVEEV----  148 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC--EEEEECCGGGTCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccc--cccccccchhccc----
Confidence            3       6999999999764433323333   44588999998888877654    3444  8999998532110    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-H----------HHHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-A----------AFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~----------~~~~~~~~~~~~~~i~~  226 (366)
                                +......|+.+|...+.+.+.++.++   |+++..+.|+.+ .          ........ ..+     
T Consensus       149 ----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~p-----  212 (251)
T d1vl8a_         149 ----------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLK-RIP-----  212 (251)
T ss_dssp             ----------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHH-TCT-----
T ss_pred             ----------cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHh-cCC-----
Confidence                      11124579999999999999988875   688877744322 1          11222222 111     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                          ...+...+|+|+++..++...    .++++.+.+|..
T Consensus       213 ----l~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         213 ----LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             ----TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ----CCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence                123556899999999998542    588999988753

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.73  E-value=2.2e-17  Score=143.24  Aligned_cols=209  Identities=13%  Similarity=0.013  Sum_probs=147.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||++.||+++++.|+++|++         |++.+|+..+...   .....+.++.+|++++++++++++   
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   75 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAK---------VVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAV   75 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999         9999997653221   122345789999999988777653   


Q ss_pred             ----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          .+|++||+||..........+   ....+++|+.++..+.+++..    .+-.  ++|++||...+...       
T Consensus        76 ~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G--~Ii~isS~~~~~~~-------  146 (244)
T d1nffa_          76 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG--SIINISSIEGLAGT-------  146 (244)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSCC-------
T ss_pred             HHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcc--eEEecccccccccc-------
Confidence                699999999976543333323   344588999998888776543    3334  89999997543221       


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                              .....|+.+|...+.+.+.++.++   |+++..+-|+.+ ..+.....+...       ......+...+|+
T Consensus       147 --------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~-------~~pl~R~~~p~di  211 (244)
T d1nffa_         147 --------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF-------QTALGRAAEPVEV  211 (244)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS-------CCSSSSCBCHHHH
T ss_pred             --------ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHH-------hccccCCCCHHHH
Confidence                    224579999999999999998876   677776644433 222211111000       1122346789999


Q ss_pred             HHHHHHHHhcC----CCCcEEecCCCc
Q 044498          241 VEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       241 a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      |+++.+++...    .++++.+.+|..
T Consensus       212 A~~v~fL~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         212 SNLVVYLASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhChhhCCCcCCEEEECCCee
Confidence            99999998542    588999988754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.73  E-value=2.2e-17  Score=144.73  Aligned_cols=218  Identities=13%  Similarity=-0.000  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++++++||||++.||.+++++|.++|++         |++.+|+..+...       .....+..+.+|+++++++.+++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~---------Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~   76 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAK---------VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLV   76 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            6789999999999999999999999999         9999998653211       12234678999999998887765


Q ss_pred             c-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||..........+.   ...+++|+.+...+.+++.    +.+.. .++|++||.+-...    
T Consensus        77 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g-~~Iv~isS~~~~~~----  151 (261)
T d1geea_          77 QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK-GTVINMSSVHEKIP----  151 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-CEEEEECCGGGTSC----
T ss_pred             HHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccc-ccccccccchhccc----
Confidence            3       6999999999875443333333   3448899999887776654    33433 15888998643221    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                                 ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+............-.........+..
T Consensus       152 -----------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~  220 (261)
T d1geea_         152 -----------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGE  220 (261)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBC
T ss_pred             -----------CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCC
Confidence                       1224579999999999999988876   677777744432 1111111100000000001111223567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .+|+|+++..++...    .++++.+.+|..+
T Consensus       221 pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         221 PEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence            899999999998542    6899999888644

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=4.2e-17  Score=142.89  Aligned_cols=217  Identities=13%  Similarity=0.060  Sum_probs=137.0

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++++|||||++.||.++++.|+++|++         |++++|+..+..      ......+..+.+|+++++++.+++
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~---------V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAV---------IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLM   76 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHH
Confidence            36789999999999999999999999999         999998765321      112235688999999998776654


Q ss_pred             c--------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           95 S--------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~--------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +        .+|++||+||..........   +.+..+++|+.++..+.+++.+    .+..  ++|++||....-    
T Consensus        77 ~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G--~Iv~isS~~~~~----  150 (259)
T d1xq1a_          77 QTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG--NIIFMSSIAGVV----  150 (259)
T ss_dssp             HHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC--EEEEEC----------
T ss_pred             HHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccc--cccccccccccc----
Confidence            2        48999999997654332222   2344588999998888776643    4444  899999964321    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                 +......|+.+|.+.+.+.+.++.++   |+++..+-|+.+ ..+...... ...............+.
T Consensus       151 -----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~  218 (259)
T d1xq1a_         151 -----------SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGRFG  218 (259)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------C
T ss_pred             -----------cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhCCCCCCCc
Confidence                       11235679999999999999988875   788877755543 333333222 11111111112233466


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ..+|+|.++..++...    .++++.+.+|..+
T Consensus       219 ~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         219 EPEEVSSLVAFLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             CGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred             CHHHHHHHHHHHhCchhcCCcCcEEEeCCCEEC
Confidence            7999999999998432    5788888777543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.71  E-value=1.1e-16  Score=140.09  Aligned_cols=218  Identities=13%  Similarity=0.019  Sum_probs=147.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---ccccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---MEDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---~~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||++.||+++++.|+++|++         |++.+|+.....   ......+..+.+|+++++++.++++   
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   74 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGAR---------VAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELL   74 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEE---------EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999         999998764322   1122346789999999998887653   


Q ss_pred             ----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----c-CCCceeEEEEecccccCCCCCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----N-GVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~-~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                          ++|++||+||..........+.   +..+++|+.++..+.+++..    . ...  ++|++||...+-.       
T Consensus        75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g--~Iv~isS~~~~~~-------  145 (256)
T d1k2wa_          75 DRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGG--KIINMASQAGRRG-------  145 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE--EEEEECCGGGTSC-------
T ss_pred             HHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCC--ccccccchhhccc-------
Confidence                6999999999765433333333   44588999998888876433    1 233  8999999654321       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----HHHHHHHHhC-CC-CeE---EecCCcc
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----AAFSRKAVTS-TD-NFE---MWGDGKQ  230 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----~~~~~~~~~~-~~-~~~---i~~~~~~  230 (366)
                              ......|+.+|...+.+.+.++.++   |+++..+.|+.+     ..+....... .. .-.   .......
T Consensus       146 --------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  217 (256)
T d1k2wa_         146 --------EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVP  217 (256)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHST
T ss_pred             --------cccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCC
Confidence                    1224679999999999999988775   677766644322     1121111110 00 000   0000011


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      ...+...+|+|.++..++...    .++++.+.+|..+|
T Consensus       218 lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         218 FGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            223567999999999988542    58899998886553

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.70  E-value=2.1e-17  Score=144.16  Aligned_cols=206  Identities=14%  Similarity=0.058  Sum_probs=146.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++.+|||||++.||+++++.|.++|++         |++++|+.....      ......+..+.+|+++++++.+++
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~---------V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~   78 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSH---------VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVI   78 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSE---------EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            36789999999999999999999999999         999998754321      112234688999999999887765


Q ss_pred             c-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+|+..........+   ....+++|+.++..+.+++.    +.+-.  ++|++||..-+-.    
T Consensus        79 ~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G--~IVnisS~~~~~~----  152 (251)
T d2c07a1          79 NKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG--RIINISSIVGLTG----  152 (251)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE--EEEEECCTHHHHC----
T ss_pred             HHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCe--EEEEECCHHhcCC----
Confidence            3       799999999977543333333   34458889999887777654    34444  8999999654321    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~  228 (366)
                                 ......|+.+|...+.+.+.++.++   |+++..+.|+.+         ..+...+.. ..+       
T Consensus       153 -----------~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~-~~p-------  213 (251)
T d2c07a1         153 -----------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIIS-NIP-------  213 (251)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHT-TCT-------
T ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHh-cCC-------
Confidence                       1224579999999999999998875   677766644322         122222222 111       


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                        ...+...+|+|.++..++...    .|+++.+.+|-
T Consensus       214 --l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         214 --AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             --CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence              123567999999999998542    58889988774

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.70  E-value=4.6e-17  Score=141.99  Aligned_cols=215  Identities=11%  Similarity=-0.014  Sum_probs=146.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++++|||||++.||+++++.|.++|++         |++.+|+.+....     .....+.++.+|+++++++.++++ 
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAK---------VMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHH
Confidence            6789999999999999999999999999         9999987643211     122356889999999988777653 


Q ss_pred             ------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCCCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                            ++|++||+||..........+.   ...+++|+.++..+.+++...    +.. .++|++||..-+-.      
T Consensus        76 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~g-g~Ii~isS~~~~~~------  148 (251)
T d1zk4a1          76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLG-ASIINMSSIEGFVG------  148 (251)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-EEEEEECCGGGTSC------
T ss_pred             HHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCC-CceEeeeccceecc------
Confidence                  6999999999875433333333   345889999998888876542    221 27899999644311      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHH-----cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD-----FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~-----~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                               ......|+.+|...+.+.+.++.+     +|+++..+.|+.+ ..+...... ...............+..
T Consensus       149 ---------~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~  218 (251)
T d1zk4a1         149 ---------DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGE  218 (251)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTTTCTTSSCBC
T ss_pred             ---------CCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHHHHhCCCCCCCcC
Confidence                     112457999999999988887754     3678777754433 333222111 000000001112223678


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .+|+|+++.+++...    .++++.+.+|.
T Consensus       219 pedvA~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         219 PNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhCCCcCcEEEECccc
Confidence            999999999998542    58899998774

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=3.5e-17  Score=143.03  Aligned_cols=205  Identities=16%  Similarity=0.082  Sum_probs=145.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||++.||.+++++|.++|++         |++.+|+.....      ......+.++.+|+++++++.++++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~   80 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGAS---------VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Confidence            6789999999999999999999999999         999998764321      1122346789999999988777653


Q ss_pred             -------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             ++|++||+||..... ..+.   +.+..+++|+.++..+.+++..    .+-.  ++|++||...+..     
T Consensus        81 ~~~~~~g~iDilvnnAG~~~~~-~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g--~Ii~isS~~~~~~-----  152 (255)
T d1fmca_          81 FAISKLGKVDILVNNAGGGGPK-PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG--VILTITSMAAENK-----  152 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCC-CTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTCC-----
T ss_pred             HHHHHcCCCCEeeeCCcCCCCC-cccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccc--ccccccccchhcc-----
Confidence                   699999999976432 2222   2344588999998877776544    3444  7999998654321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH---------HHHHHhCCCCeEEecCC
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF---------SRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~---------~~~~~~~~~~~~i~~~~  228 (366)
                                ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+         .....+ ..+       
T Consensus       153 ----------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~-~~p-------  214 (255)
T d1fmca_         153 ----------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQ-HTP-------  214 (255)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHH-TCS-------
T ss_pred             ----------ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHh-cCC-------
Confidence                      1235579999999999999988875   677766644332 222         222222 111       


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                        ...+...+|+|+++..++...    .++++.+.+|..
T Consensus       215 --l~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         215 --IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             --SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             --CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence              123567899999999998542    688999988863

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.70  E-value=2.7e-16  Score=137.62  Aligned_cols=214  Identities=16%  Similarity=0.067  Sum_probs=146.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc-
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +|.+|||||++.||.++++.|.++|++         |++.+|+.....      ......+.++.+|+++++++.++++ 
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~   72 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLR---------VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA   72 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            467899999999999999999999999         999999754321      1122356889999999998877653 


Q ss_pred             ------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHc------CCCceeEEEEecccccCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMN------GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~------~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                            ++|++||+||..........+.   +..+++|+.++.++.+++.++      +..  ++|++||...+..    
T Consensus        73 ~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g--~Ii~i~S~~~~~~----  146 (257)
T d2rhca1          73 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG--RIVNIASTGGKQG----  146 (257)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEE--EEEEECCGGGTSC----
T ss_pred             HHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCc--ccccccccccccc----
Confidence                  6999999999765433333333   445889999999999987642      333  7999988654322    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh----C-CCCe----EEecC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT----S-TDNF----EMWGD  227 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~----~-~~~~----~i~~~  227 (366)
                                 ......|+.+|...+.+.+.++.++   ++++..+.|+.+ ..+......    . ....    .-...
T Consensus       147 -----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~  215 (257)
T d2rhca1         147 -----------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA  215 (257)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred             -----------cccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHh
Confidence                       1224579999999999999999986   466666644432 222222111    0 0000    00001


Q ss_pred             CcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          228 GKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       228 ~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ......+...+|+|+++.+++...    .++++.+.+|-
T Consensus       216 ~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         216 RVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            111223677999999999998542    58889988763

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.69  E-value=4.2e-16  Score=136.20  Aligned_cols=216  Identities=16%  Similarity=0.055  Sum_probs=145.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      |.+|||||++.||++++++|.++|++         |++.+|+.....      ......+.++.+|+++++++.++++  
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~   72 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFA---------VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            34699999999999999999999999         999999765321      1122346788999999998777653  


Q ss_pred             -----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|++||+||..........+.   +..+++|+.++.++.+++.+    .+.. .++|++||...+..       
T Consensus        73 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~-g~Iv~isS~~~~~~-------  144 (255)
T d1gega_          73 RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG-GKIINACSQAGHVG-------  144 (255)
T ss_dssp             HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-EEEEEECCGGGTSC-------
T ss_pred             HHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc-cccccccchhhccc-------
Confidence                 6999999999765433333333   44588999999888877543    2321 27999998654321       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHh-----CCCCeE----EecCCcc
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVT-----STDNFE----MWGDGKQ  230 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~-----~~~~~~----i~~~~~~  230 (366)
                              ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+......     ......    -......
T Consensus       145 --------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  216 (255)
T d1gega_         145 --------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT  216 (255)
T ss_dssp             --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT
T ss_pred             --------CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCC
Confidence                    1224579999999999999988775   677777754433 222221111     000000    0011112


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ...+...+|+|+++.+++...    .|+++.+.+|-.+
T Consensus       217 l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         217 LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEEe
Confidence            233677999999999998542    5888999887543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.69  E-value=7.9e-16  Score=134.54  Aligned_cols=217  Identities=14%  Similarity=0.057  Sum_probs=148.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--------cccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++++|||||++.||+++++.|.++|++         |.+.+|+......        .....+..+.+|+++++++.++
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~   73 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAK---------LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY   73 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHH
Confidence            5689999999999999999999999999         9999997653211        1122457889999999988776


Q ss_pred             hc-------CCCEEEEcccccCCcc-ccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMG-FIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      ++       ++|++||+||...... ...   .+.+..+++|+.++..+.+++..    .+-.  ++|++||...+-.  
T Consensus        74 ~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G--~Ii~isS~~~~~~--  149 (258)
T d1iy8a_          74 VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG--MVVNTASVGGIRG--  149 (258)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCGGGTSB--
T ss_pred             HHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCC--CCcccccHhhccC--
Confidence            53       6999999999754322 222   23345588999998888876643    3444  8999999654321  


Q ss_pred             CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC--CCCe-EE---ecCC
Q 044498          159 QLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS--TDNF-EM---WGDG  228 (366)
Q Consensus       159 ~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~--~~~~-~i---~~~~  228 (366)
                                   ......|+.+|...+.+.+.++.++   ++++..+.|+.+ ..+.......  .... ..   ....
T Consensus       150 -------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T d1iy8a_         150 -------------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV  216 (258)
T ss_dssp             -------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhc
Confidence                         1124679999999999999988875   688877755433 3333222210  0000 00   0011


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      .....+...+|+|.++..++...    .++++.+.+|...
T Consensus       217 ~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         217 NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence            12233667999999999998542    6889999888653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.69  E-value=6.9e-16  Score=135.06  Aligned_cols=217  Identities=17%  Similarity=0.068  Sum_probs=146.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------cccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++++|||||++.||+++++.|.++|++         |++.+|+..+...      .....+.++.+|+++++++.+++
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGAS---------VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELM   76 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHH
Confidence            36889999999999999999999999999         9999997653211      12234578899999998777654


Q ss_pred             -------c-CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           95 -------S-GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 -------~-~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                             . .+|++||+||..........+.   +..+++|+.++..+.+++.+    .+-.  ++|++||......   
T Consensus        77 ~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G--~Ii~isS~~~~~~---  151 (259)
T d2ae2a_          77 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG--NVVFISSVSGALA---  151 (259)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE--EEEEECCGGGTSC---
T ss_pred             HHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccc--ccccccccccccc---
Confidence                   2 4899999999765433333333   34588999998887776644    3444  8999999654221   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCC---CeEEecCCccee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTD---NFEMWGDGKQTR  232 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~---~~~i~~~~~~~~  232 (366)
                                  ......|+.+|...+.+.+.++.++   ++++..+.|+.+ ..+.........   ...-..+.....
T Consensus       152 ------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~  219 (259)
T d2ae2a_         152 ------------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR  219 (259)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC
T ss_pred             ------------cccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC
Confidence                        1224679999999999999998875   677766644433 222222211000   000000011122


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .+...+|+|+++..++...    .++++.+.+|-.
T Consensus       220 R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         220 RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeE
Confidence            3567899999999998542    588999987753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.5e-16  Score=134.80  Aligned_cols=217  Identities=12%  Similarity=0.020  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc--cccccceEEEccCCChhHHHhhhc----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM--EDMFCHEFHLVDLRVMDNCLRMTS----   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~--~~~~~v~~~~~D~~~~~~l~~~~~----   95 (366)
                      +++++|||||++.||+++++.|+++|++         |++.+|+......  ....++.++.+|++++++++++++    
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGAR---------VVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999         9999987653221  122346889999999998887653    


Q ss_pred             ---CCCEEEEcccccCCcccc-ccC---cchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCCCCCcc
Q 044498           96 ---GVDNMSNLAADMGGMGFI-QSN---HSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQLDTDVK  165 (366)
Q Consensus        96 ---~~d~vi~~a~~~~~~~~~-~~~---~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~~~~~~  165 (366)
                         ++|++||+||........ ..+   .+..+++|+.++..+.+++.+.   +-.  ++|++||....-.         
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G--~Ii~isS~~~~~~---------  144 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQG--NVINISSLVGAIG---------  144 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEECCHHHHHC---------
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCC--CCccccccccccc---------
Confidence               699999999965432222 223   3455889999988887766542   123  8999999754321         


Q ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-eEEe---cCCcceeeeeeH
Q 044498          166 ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-FEMW---GDGKQTRSLTFI  237 (366)
Q Consensus       166 e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~~i~---~~~~~~~~~i~v  237 (366)
                            ......|+.+|...+.+.+.++.++   ++++..+.|+.+ ..+.......... ....   ........+...
T Consensus       145 ------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p  218 (250)
T d1ydea1         145 ------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQP  218 (250)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCH
T ss_pred             ------ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCH
Confidence                  1224579999999999999988875   688877755433 3333333221100 0000   000112346789


Q ss_pred             HHHHHHHHHHHhcC---CCCcEEecCCCcc
Q 044498          238 DECVEGVLRLIKSD---FREPLNIGSDEMV  264 (366)
Q Consensus       238 ~D~a~~~~~~l~~~---~~~~~~i~~~~~~  264 (366)
                      +|+|+++.+++...   .++++.+.+|..+
T Consensus       219 ~eva~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         219 AEVGAAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence            99999999988532   5788998887543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.68  E-value=4.2e-16  Score=136.59  Aligned_cols=214  Identities=19%  Similarity=0.100  Sum_probs=143.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +++++|||||++.||+++++.|.++|++         |++.+|+.....      ......+..+.+|+++++++.++++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTA---------IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVD   74 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            6789999999999999999999999999         999998764321      1123356789999999988777653


Q ss_pred             -------CCCEEEEcccccCCcc-ccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMG-FIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~-~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ++|++||+||...... ....+   ....+++|+.+...+.+++.+    .+-.  ++|++||..-+...   
T Consensus        75 ~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G--~II~isS~~~~~~~---  149 (260)
T d1zema1          75 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG--RIVNTASMAGVKGP---  149 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCHHHHSCC---
T ss_pred             HHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCC--CCCeeechhhccCC---
Confidence                   6999999999764322 22223   344588999998888877643    3334  89999997543221   


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHH----HH-hCCCCeEEe------
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRK----AV-TSTDNFEMW------  225 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~----~~-~~~~~~~i~------  225 (366)
                                  .....|+.+|...+.+.+.++.++   |+++..+.|+.+ ..++..    .. .........      
T Consensus       150 ------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T d1zema1         150 ------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVA  217 (260)
T ss_dssp             ------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHH
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHH
Confidence                        124579999999999999988876   677766644432 111111    10 000000000      


Q ss_pred             ---cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          226 ---GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       226 ---~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                         ........+...+|+|.++.+++...    .++++.+.+|
T Consensus       218 ~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         218 QQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence               00011223567899999999998542    5788887654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.6e-17  Score=143.03  Aligned_cols=217  Identities=13%  Similarity=0.032  Sum_probs=148.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--------ccccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--------MEDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--------~~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .++.+|||||++.||.++++.|.++|++         |++++|+..+..        ......+.++.+|++++++++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAK---------VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDT   72 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHH
Confidence            4689999999999999999999999999         999999865311        11233567899999999888776


Q ss_pred             hc-------CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc----CC-CceeEEEEecccccCCCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN----GV-MSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~-~~~r~I~~SS~~vyg~~~~~~  161 (366)
                      ++       ++|++||+||...     ..+.+..+++|+.+..++..++.+.    +. ...++|++||...+-      
T Consensus        73 ~~~~~~~~G~iDilVnnAg~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~------  141 (254)
T d2gdza1          73 FRKVVDHFGRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM------  141 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------
T ss_pred             HHHHHHHcCCcCeecccccccc-----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc------
Confidence            53       6999999999753     3566788999999887777666542    11 112699999975432      


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHH--HHH---HcCCcEEEeCCCcH-HHHHHHHHhC---CCCeEE---ecCCc
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKH--YTK---DFEIECRLVGEKAP-AAFSRKAVTS---TDNFEM---WGDGK  229 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~--~~~---~~~~~~~i~r~~~~-~~~~~~~~~~---~~~~~i---~~~~~  229 (366)
                               +......|+.+|...+.+.+.  ++.   .+++++..+.|+.+ ..++......   ......   ..+..
T Consensus       142 ---------~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (254)
T d2gdza1         142 ---------PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI  212 (254)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH
T ss_pred             ---------CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC
Confidence                     112245799999999988764  333   34788877755543 3333322210   000000   00000


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCcccHH
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEMVSIN  267 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~~s~~  267 (366)
                      ....+...+|+|++++.++..+  .++++.+.+|..+.++
T Consensus       213 p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         213 KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred             CCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence            1123567899999999999765  6889999888766544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5e-16  Score=134.84  Aligned_cols=217  Identities=17%  Similarity=0.118  Sum_probs=149.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-cccccceEEEccCCChhHHHhhh---cCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-EDMFCHEFHLVDLRVMDNCLRMT---SGV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-~~~~~v~~~~~D~~~~~~l~~~~---~~~   97 (366)
                      +++++|||||++.||+++++.|+++|++         |++.+|++.+..+ ....++....+|+.+.+.++...   .++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~---------Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i   75 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAK---------VIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERL   75 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccc
Confidence            6789999999999999999999999999         9999998654322 23345678889998877666554   479


Q ss_pred             CEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           98 DNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      |++||+||..........+.   ...+++|+.++..+.+++..    .+..  ++|++||..-  ...            
T Consensus        76 d~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g--~Ii~isS~~~--~~~------------  139 (245)
T d2ag5a1          76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG--NIINMSSVAS--SVK------------  139 (245)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCSBT--TTB------------
T ss_pred             eeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCc--eeeeeechhh--ccC------------
Confidence            99999999876533333333   34488999998888877654    3344  8999998531  100            


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe----EEecCCcceeeeeeHHHHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF----EMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~----~i~~~~~~~~~~i~v~D~a~  242 (366)
                      +..+...|+.+|...+.+.+.++.++   |+++..+.++.+ ..+...........    .......+...+...+|+++
T Consensus       140 ~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~  219 (245)
T d2ag5a1         140 GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM  219 (245)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            22345679999999999999998886   677776655443 22322222211000    00001112234678999999


Q ss_pred             HHHHHHhcC----CCCcEEecCCCc
Q 044498          243 GVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       243 ~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ++..++...    .++++.+.+|.+
T Consensus       220 ~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         220 LCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHhChhhCCCcCceEEeCCCcC
Confidence            999999642    688999988754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.68  E-value=4.1e-16  Score=136.74  Aligned_cols=214  Identities=11%  Similarity=-0.024  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      ++|++|||||++.||.++++.|+++|++         |++++|+..+...       .....+.++.+|+++++++.+++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   78 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGAN---------VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTI   78 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEE---------EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHH
Confidence            6789999999999999999999999999         9999998764321       11234678999999999887765


Q ss_pred             c-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+||..........+   .+..+++|+.++..+.+++.+    .+.. .+++..||...+......
T Consensus        79 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~-g~i~~~~s~~~~~~~~~~  157 (260)
T d1h5qa_          79 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-GSIVVTSSMSSQIINQSS  157 (260)
T ss_dssp             HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEEECCGGGTSCCEEE
T ss_pred             HHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccc-eEEEEeeccccccccccc
Confidence            3       699999999976433222223   344578999988877766543    2322 156666665443222111


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCC
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~  228 (366)
                      .        ........|+.+|...+.+.+.++.++   |+++..+.++.+         ..+...... ..+       
T Consensus       158 ~--------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~-~~p-------  221 (260)
T d1h5qa_         158 L--------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQAS-NIP-------  221 (260)
T ss_dssp             T--------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHH-TCT-------
T ss_pred             c--------ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHh-cCC-------
Confidence            0        011235679999999999999988775   677766643322         223333332 111       


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                        ...+...+|+|+++..++...    .++++.+.+|..
T Consensus       222 --l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         222 --LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             --TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             --CCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence              122556899999999998542    588999988763

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.68  E-value=1e-16  Score=139.05  Aligned_cols=210  Identities=14%  Similarity=-0.032  Sum_probs=141.6

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhhc--
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMTS--   95 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~~--   95 (366)
                      .||||||++.||++++++|+++|++         |++.+++.....       ......+.++.+|+++++++.++++  
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~---------V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   73 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCK---------VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTA   73 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999         988765443221       1122346789999999988877653  


Q ss_pred             -----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCC
Q 044498           96 -----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        96 -----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                           ++|++||+||..........+   .+..+++|+.+...+.+++.+    .+-.  ++|++||...+-.       
T Consensus        74 ~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G--~IVnisS~~~~~~-------  144 (244)
T d1edoa_          74 IDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG--RIINIASVVGLIG-------  144 (244)
T ss_dssp             HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCTHHHHC-------
T ss_pred             HHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc--EEEEEcChhhcCC-------
Confidence                 699999999977543333333   344588999998887776643    3444  8999999654321       


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDE  239 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D  239 (366)
                              ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+........  ............+...+|
T Consensus       145 --------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~--~~~~~~~~pl~R~~~p~d  214 (244)
T d1edoa_         145 --------NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDM--EKKILGTIPLGRTGQPEN  214 (244)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHH--HHHHHTSCTTCSCBCHHH
T ss_pred             --------CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHH--HHHHHhcCCCCCCcCHHH
Confidence                    1224579999999999999998886   677777754433 22222110000  000001111223567999


Q ss_pred             HHHHHHHHHhcC-----CCCcEEecCCC
Q 044498          240 CVEGVLRLIKSD-----FREPLNIGSDE  262 (366)
Q Consensus       240 ~a~~~~~~l~~~-----~~~~~~i~~~~  262 (366)
                      +|+++.+++..+     .|+++.+.+|-
T Consensus       215 vA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         215 VAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            999999986332     58889988774

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.67  E-value=3.3e-16  Score=136.55  Aligned_cols=216  Identities=13%  Similarity=0.033  Sum_probs=146.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||++.||.++++.|+++|++         |++.+|+......   .......++.+|+++.+++.++++   
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~---------V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   75 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAK---------VAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ   75 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999         9999987643211   112345788999999988777653   


Q ss_pred             ----CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc-CCCceeEEEEecccccCCCCCCCCCcccc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN-GVMSLTFFFVSSACIYPEFKQLDTDVKES  167 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~-~~~~~r~I~~SS~~vyg~~~~~~~~~~e~  167 (366)
                          ++|++||+||..........+   .+..+++|+.++..+.+++.+. .-+..++|++||...+-            
T Consensus        76 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~------------  143 (253)
T d1hxha_          76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL------------  143 (253)
T ss_dssp             HHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------------
T ss_pred             HHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc------------
Confidence                699999999976543222223   3455889999988887776542 11113899999965422            


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEe---cCCcceeeeeeHH
Q 044498          168 EAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMW---GDGKQTRSLTFID  238 (366)
Q Consensus       168 ~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~---~~~~~~~~~i~v~  238 (366)
                         +......|+.+|...+.+.+.++.++     ++++..+-|+.+ ..+..........-...   ......-.+...+
T Consensus       144 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe  220 (253)
T d1hxha_         144 ---PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE  220 (253)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred             ---CccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH
Confidence               11224579999999999988887664     467666654433 44444433211110000   0111122467799


Q ss_pred             HHHHHHHHHHhcC----CCCcEEecCC
Q 044498          239 ECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       239 D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      |+|+++.+++...    .++++++.+|
T Consensus       221 dvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         221 RIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            9999999998542    5888998776

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.67  E-value=1.8e-16  Score=138.71  Aligned_cols=217  Identities=13%  Similarity=0.010  Sum_probs=144.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      -++|++|||||++-||++++++|+++|++         |++++|++.+..      ......+.++.+|+++.+++++++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~---------V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~   74 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGAR---------VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLM   74 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHH
Confidence            36889999999999999999999999999         999999864321      112234568899999998877654


Q ss_pred             c--------CCCEEEEcccccCCcccccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCC
Q 044498           95 S--------GVDNMSNLAADMGGMGFIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 ~--------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      +        .+|++||+||..........   +....+++|+.++..+.+++..    .+..  ++|++||......   
T Consensus        75 ~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g--~ii~isS~~~~~~---  149 (258)
T d1ae1a_          75 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG--NVIFLSSIAGFSA---  149 (258)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE--EEEEECCGGGTSC---
T ss_pred             HHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccc--ccccccccccccc---
Confidence            2        38999999997754333222   3344588999998887776643    3444  8999999755322   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-eEEe---cCCcce
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-FEMW---GDGKQT  231 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~~i~---~~~~~~  231 (366)
                                  ......|+.+|...+.+.+.++.++   ++++..+.++.+ ..+.......... -...   ......
T Consensus       150 ------------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl  217 (258)
T d1ae1a_         150 ------------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM  217 (258)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT
T ss_pred             ------------cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC
Confidence                        1225579999999999999998886   567766654433 3233222221000 0000   000111


Q ss_pred             eeeeeHHHHHHHHHHHHhc--C--CCCcEEecCCCc
Q 044498          232 RSLTFIDECVEGVLRLIKS--D--FREPLNIGSDEM  263 (366)
Q Consensus       232 ~~~i~v~D~a~~~~~~l~~--~--~~~~~~i~~~~~  263 (366)
                      ..+...+|+|.++..++..  .  .++.+.+.+|-.
T Consensus       218 gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         218 GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCee
Confidence            2367899999999999943  2  578898887743

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.67  E-value=3.5e-16  Score=135.44  Aligned_cols=207  Identities=12%  Similarity=0.002  Sum_probs=144.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||++.||.++++.|.++|++         |++.+|+..+...   .....+.++++|+++++++.++++   
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~   74 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGAS---------LVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEAL   74 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999         9999988654221   122345789999999998877653   


Q ss_pred             ----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                          ++|++||+|+..........+.   ...+++|+.+...+.+++.+.-.++..++.+||.+...             
T Consensus        75 ~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~-------------  141 (241)
T d2a4ka1          75 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-------------  141 (241)
T ss_dssp             HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-------------
T ss_pred             HHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc-------------
Confidence                6999999999765433333333   34488999999999998877643322455555532211             


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH---------HHHHHHHHhCCCCeEEecCCcceeeeee
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP---------AAFSRKAVTSTDNFEMWGDGKQTRSLTF  236 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~i~  236 (366)
                         ......|+.+|.+.+.+.+.++.++   ++++..+.++.+         ........+ ..+         ...+..
T Consensus       142 ---~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~-~~p---------~~r~~~  208 (241)
T d2a4ka1         142 ---AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG-ASP---------LGRAGR  208 (241)
T ss_dssp             ---HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHH-TST---------TCSCBC
T ss_pred             ---ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHh-CCC---------CCCCcC
Confidence               1124569999999999999999887   477766633322         222333332 111         123567


Q ss_pred             HHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          237 IDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       237 v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      .+|+|+++..++...    .++++.+.+|..
T Consensus       209 p~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         209 PEEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            999999999999542    578999988764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.67  E-value=2e-16  Score=136.56  Aligned_cols=211  Identities=12%  Similarity=0.035  Sum_probs=141.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh-hHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM-DNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~-~~l~~~~~~~d~v  100 (366)
                      +++++|||||++.||+++++.|.++|++         |++.+|+.....   ..+.+++.+|+++. +.+.+.+.++|++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~---------V~~~~r~~~~l~---~~~~~~~~~Dv~~~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAE---------VTICARNEELLK---RSGHRYVVCDLRKDLDLLFEKVKEVDIL   70 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHH---HTCSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHH---hcCCcEEEcchHHHHHHHHHHhCCCcEE
Confidence            5789999999999999999999999999         999998754322   22347889999864 4455556789999


Q ss_pred             EEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCcccccCCCCC
Q 044498          101 SNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAE  173 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~  173 (366)
                      ||+||..........+   .+..+++|+.++..+.+++.    +.+..  ++|++||......               ..
T Consensus        71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G--~ii~i~S~~~~~~---------------~~  133 (234)
T d1o5ia_          71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG--RIVAITSFSVISP---------------IE  133 (234)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC---------------CT
T ss_pred             EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccc--ccccccccccccc---------------cc
Confidence            9999976433222223   33447889998777776654    34444  8999999654332               22


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHh
Q 044498          174 PQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK  249 (366)
Q Consensus       174 p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  249 (366)
                      ....|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+....... ..............+...+|+|.++.+++.
T Consensus       134 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~pl~R~~~pediA~~v~fL~S  212 (234)
T d1o5ia_         134 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE-EKKKQVESQIPMRRMAKPEEIASVVAFLCS  212 (234)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH-HHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            34579999999999999988876   677766644322 1111111100 000000011122336679999999999985


Q ss_pred             cC----CCCcEEecCCC
Q 044498          250 SD----FREPLNIGSDE  262 (366)
Q Consensus       250 ~~----~~~~~~i~~~~  262 (366)
                      ..    .++++.+.+|.
T Consensus       213 ~~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         213 EKASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             hhhcCCcCcEEEECccc
Confidence            42    58899998774

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.4e-16  Score=136.87  Aligned_cols=206  Identities=15%  Similarity=0.046  Sum_probs=135.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------c--ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------E--DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------~--~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +++.+|||||++.||.++++.|.++|++         |++.+|+..+...      .  ....+.++.+|+++++++.++
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~---------Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~   79 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLK---------VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSM   79 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHH
Confidence            6789999999999999999999999999         9999987653211      1  112467889999999988776


Q ss_pred             hc-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCC
Q 044498           94 TS-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        94 ~~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++       ++|++||+||..........+.   +..+++|+.+...+.+++.    +.+.+..++|++||.+-+...  
T Consensus        80 v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~--  157 (257)
T d1xg5a_          80 FSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--  157 (257)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC--
T ss_pred             HHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC--
Confidence            53       6999999999765433322333   4457889888877766653    343222389999997543211  


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH-----cCCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceee
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD-----FEIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRS  233 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~-----~~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  233 (366)
                                 |......|+.+|...+.+.+.++.+     +++++..+.++.+ ..+...... . .............
T Consensus       158 -----------p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~-~-~~~~~~~~~~~~r  224 (257)
T d1xg5a_         158 -----------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-K-DPEKAAATYEQMK  224 (257)
T ss_dssp             -----------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-T-CHHHHHHHHC---
T ss_pred             -----------CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh-h-hHHHHHhcCCCCC
Confidence                       1122446999999999999988765     3677766644433 222222221 1 1000000111233


Q ss_pred             eeeHHHHHHHHHHHHhcC
Q 044498          234 LTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       234 ~i~v~D~a~~~~~~l~~~  251 (366)
                      +...+|+|+++..++..+
T Consensus       225 ~~~pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         225 CLKPEDVAEAVIYVLSTP  242 (257)
T ss_dssp             CBCHHHHHHHHHHHHHSC
T ss_pred             CcCHHHHHHHHHHHhCCh
Confidence            677999999999998765

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.66  E-value=1.7e-15  Score=133.61  Aligned_cols=218  Identities=14%  Similarity=0.046  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||++-||.++++.|+++|++         |++.+++..+...       .....+.++.+|+++++++.+.+
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~---------Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~   87 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCK---------VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF   87 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHH
Confidence            6799999999999999999999999999         9999887543211       12334678999999998877765


Q ss_pred             c-------CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCc
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                      +       ++|++||+++..........+.   ...+++|+.+...+++++...=.++.++++++|...  ...      
T Consensus        88 ~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~--~~~------  159 (272)
T d1g0oa_          88 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QAK------  159 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TCS------
T ss_pred             HHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc--ccc------
Confidence            3       6899999999775443333333   334788999999999988765322227888877432  111      


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC----eE-------EecCCc
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN----FE-------MWGDGK  229 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~----~~-------i~~~~~  229 (366)
                            +......|+.+|...+.+.+.++.++   |+++..+.++.+ ..+..........    ..       ......
T Consensus       160 ------~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (272)
T d1g0oa_         160 ------AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS  233 (272)
T ss_dssp             ------SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC
T ss_pred             ------cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC
Confidence                  12235569999999999999988875   788877755443 4444444331110    00       000011


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ....+...+|+|.++..|+...    .|+++.+.+|.
T Consensus       234 PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         234 PLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            1224678999999999999542    57888888775

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.66  E-value=2e-15  Score=132.89  Aligned_cols=211  Identities=13%  Similarity=0.081  Sum_probs=144.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhhc-
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMTS-   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~~-   95 (366)
                      +++++|||||++.||.++++.|+++|++         |++++|+......     .....+.++.+|+++++++.++++ 
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAK---------VVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT   75 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHH
Confidence            6789999999999999999999999999         9999987643211     112235788999999998877653 


Q ss_pred             ------CCCEEEEcccccCCcc--cccc---CcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCC
Q 044498           96 ------GVDNMSNLAADMGGMG--FIQS---NHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~--~~~~---~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                            ++|++||+||......  ....   +.+..+++|+.++..+.+++.+    .+..  ++|++||...+-...  
T Consensus        76 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g--~ii~iss~~~~~~~~--  151 (268)
T d2bgka1          76 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG--SIVFTASISSFTAGE--  151 (268)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE--EEEEECCGGGTCCCT--
T ss_pred             HHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCC--Ccccccccccccccc--
Confidence                  6999999999754321  1122   2344578999998888877654    3434  899999864432111  


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH------------HHHHHHHHhCCCCeEEe
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP------------AAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~------------~~~~~~~~~~~~~~~i~  225 (366)
                                  .....|+.+|...+.+.+.++.++   |+++..+.++.+            .............    
T Consensus       152 ------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----  215 (268)
T d2bgka1         152 ------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN----  215 (268)
T ss_dssp             ------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS----
T ss_pred             ------------ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc----
Confidence                        112369999999999999988875   677766633221            1222222221111    


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                          ....+...+|+|+++.+++...    .++++.+.+|...+
T Consensus       216 ----~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         216 ----LKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             ----SCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ----cCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccC
Confidence                1112567999999999998542    58999998886443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.66  E-value=3.6e-16  Score=136.41  Aligned_cols=212  Identities=10%  Similarity=-0.002  Sum_probs=144.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCC-ChhHHHh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLR-VMDNCLR   92 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~-~~~~l~~   92 (366)
                      .++++||||||++.||.+++++|+++|.+         |++++|.......       ....++.++.+|++ +.+++.+
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~---------vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   73 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLK---------NFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCS---------EEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCE---------EEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHH
Confidence            36789999999999999999999999999         9888776543211       12335788999998 5445554


Q ss_pred             hh-------cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHc----C-CCceeEEEEecccccCCCCCC
Q 044498           93 MT-------SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMN----G-VMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        93 ~~-------~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      ++       .++|++||+||...     ..+.+..+++|+.++.++.+++.+.    + ....++|++||..-+..    
T Consensus        74 ~~~~~~~~~g~iDilvnnAG~~~-----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~----  144 (254)
T d1sbya1          74 LLKKIFDQLKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----  144 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----
T ss_pred             HHHHHHHHcCCCCEEEeCCCCCC-----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC----
Confidence            43       37999999999653     4566788999999988888877652    1 11137999999654321    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeE-EecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFE-MWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~-i~~~~~~~~~~i  235 (366)
                                 ......|+.+|.....+.+.++.++   ++++..+.|+.+ ..+...+.. ..... ........+...
T Consensus       145 -----------~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~  212 (254)
T d1sbya1         145 -----------IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNS-WLDVEPRVAELLLSHPTQ  212 (254)
T ss_dssp             -----------CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCC-GGGSCTTHHHHHTTSCCE
T ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccccc-chhHHHHHHhccccCCCC
Confidence                       2224579999999999988887765   788877755543 333322111 00000 000000112345


Q ss_pred             eHHHHHHHHHHHHhcC-CCCcEEecCCC
Q 044498          236 FIDECVEGVLRLIKSD-FREPLNIGSDE  262 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~-~~~~~~i~~~~  262 (366)
                      ..+++|++++.+++.. .++++.+.+|.
T Consensus       213 ~~e~va~~~~~~~~~~~tG~vi~vdgG~  240 (254)
T d1sbya1         213 TSEQCGQNFVKAIEANKNGAIWKLDLGT  240 (254)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEEETTE
T ss_pred             CHHHHHHHHHHhhhCCCCCCEEEECCCE
Confidence            7899999999888664 67788888774

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.64  E-value=2.4e-15  Score=131.70  Aligned_cols=217  Identities=11%  Similarity=0.050  Sum_probs=146.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .++++|||||++-||.++++.|+++|++         |++..++..+...       .....+.++.+|+++++++.+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~---------Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~   75 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGAS---------VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALF   75 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHH
Confidence            6789999999999999999999999999         9887665543211       12234678999999998887765


Q ss_pred             c-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc-cccCCCCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA-CIYPEFKQLDTD  163 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~-~vyg~~~~~~~~  163 (366)
                      +       ++|++||+||..........+   .+..+.+|+.+...+++++.++=.++.+++.++|. +.+.   .    
T Consensus        76 ~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~---~----  148 (259)
T d1ja9a_          76 DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT---G----  148 (259)
T ss_dssp             HHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC---S----
T ss_pred             HHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc---C----
Confidence            3       699999999976543222222   23458899999999998887652222256666653 2221   1    


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEe-----------cCC
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMW-----------GDG  228 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~-----------~~~  228 (366)
                              ......|+.+|...+.+.+.++.++   ++++..+.++.+ ..+..............           .+.
T Consensus       149 --------~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (259)
T d1ja9a_         149 --------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM  220 (259)
T ss_dssp             --------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhC
Confidence                    1124579999999999999988875   678777755433 44444333211100000           011


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      .....+...+|+++++.+++...    .++++.+.+|.
T Consensus       221 ~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         221 NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            12234678999999999999652    57888887764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.64  E-value=3.5e-16  Score=136.95  Aligned_cols=208  Identities=11%  Similarity=0.009  Sum_probs=143.4

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|  -||++++++|+++|++         |++.+|+......     .......++.+|+++++++++++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~---------V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE---------VALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALF   77 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE---------EEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHH
Confidence            678999999998  6999999999999999         9888887542211     11224578999999998887765


Q ss_pred             c-------CCCEEEEcccccCCcc----cccc---CcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 S-------GVDNMSNLAADMGGMG----FIQS---NHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~----~~~~---~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      +       ++|++||+|+......    ....   +....+++|+.+...+.+++...-.++.++|++||......    
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~----  153 (256)
T d1ulua_          78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV----  153 (256)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB----
T ss_pred             HHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC----
Confidence            3       6999999999643211    1111   22335788999999998887654222237999998654321    


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHH-----------HHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAA-----------FSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~-----------~~~~~~~~~~~~~i~~  226 (366)
                                 ......|+.+|...+.+.+.++.++   |+++..+.++.+..           +.....+ ..      
T Consensus       154 -----------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~-~~------  215 (256)
T d1ulua_         154 -----------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQ-TA------  215 (256)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHH-HS------
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHh-cC------
Confidence                       1235679999999999999988876   67877774443311           1111111 11      


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                         ....+...+|+|+++.+++...    .++++.+.+|..
T Consensus       216 ---pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         216 ---PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             ---TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence               1123567899999999998542    588999988754

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=5.8e-16  Score=138.35  Aligned_cols=207  Identities=14%  Similarity=0.101  Sum_probs=141.5

Q ss_pred             CCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc------------cccccceEEEccCC
Q 044498           18 HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM------------EDMFCHEFHLVDLR   85 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~------------~~~~~v~~~~~D~~   85 (366)
                      +|..+++++|||||++.||+++++.|.++|++         |++.++.......            ........+.+|+.
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~---------Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   72 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGAL---------VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYD   72 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccc
Confidence            45557899999999999999999999999999         9999876432110            01122356778888


Q ss_pred             ChhHHHhhh-------cCCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecc
Q 044498           86 VMDNCLRMT-------SGVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSA  151 (366)
Q Consensus        86 ~~~~l~~~~-------~~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~  151 (366)
                      +.++.++++       .++|++||+||..........+.   +..+++|+.++..+.+++..    .+-.  ++|++||.
T Consensus        73 ~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G--~IV~isS~  150 (302)
T d1gz6a_          73 SVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG--RIIMTASA  150 (302)
T ss_dssp             CGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEEEECCH
T ss_pred             hHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc--EEEEeCCh
Confidence            877665543       36999999999876543333333   44588999998888777643    4444  89999996


Q ss_pred             cccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCC
Q 044498          152 CIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       152 ~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~  228 (366)
                      ..+-..               .....|+.+|...+.+.+.++.++   |+++..+.|+.+...+....           .
T Consensus       151 ~~~~~~---------------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~-----------~  204 (302)
T d1gz6a_         151 SGIYGN---------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM-----------P  204 (302)
T ss_dssp             HHHHCC---------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS-----------C
T ss_pred             hhcCCC---------------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC-----------c
Confidence            532111               124579999999999999988875   67777775543321111100           1


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC---CCCcEEecCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD---FREPLNIGSD  261 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~  261 (366)
                      ......+..+|+|.++++|+...   .++++.+.+|
T Consensus       205 ~~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG  240 (302)
T d1gz6a_         205 EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  240 (302)
T ss_dssp             HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HhhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence            12233456799999999988532   4677777665

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.1e-15  Score=136.20  Aligned_cols=215  Identities=10%  Similarity=-0.014  Sum_probs=144.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-----------cccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-----------EDMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-----------~~~~~v~~~~~D~~~~~~l   90 (366)
                      +++++|||||++.||.++++.|.++|++         |++.+|+..+...           .....+..+.+|+++++++
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~---------Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v   81 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSN---------VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   81 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHH
Confidence            7889999999999999999999999999         9999997643211           1123567899999999988


Q ss_pred             Hhhhc-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHc----CCCceeEEEEecccccCC
Q 044498           91 LRMTS-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMN----GVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        91 ~~~~~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~----~~~~~r~I~~SS~~vyg~  156 (366)
                      .++++       ++|++||+|+..........+   .+..+++|+.++..+.+++.+.    +..  ++|++||....+ 
T Consensus        82 ~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g--~Ii~~ss~~~~~-  158 (297)
T d1yxma1          82 NNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG--SIVNIIVPTKAG-  158 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE--EEEEECCCCTTC-
T ss_pred             HHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccc--cccccccccccc-
Confidence            77653       699999999976433333323   3445889999998888877542    333  688777643221 


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC-CCC-eEEecCCcc
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS-TDN-FEMWGDGKQ  230 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~-~~~-~~i~~~~~~  230 (366)
                                     ......|+.+|.+.+.+.+.++.++   |+++..+.++.+ ..+....... .+. ..-......
T Consensus       159 ---------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~p  223 (297)
T d1yxma1         159 ---------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP  223 (297)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST
T ss_pred             ---------------ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCC
Confidence                           1124579999999999999998876   677766644432 1111110000 000 000000011


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                      ...+...+|+|.++.+++...    .++++.+.+|..
T Consensus       224 lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         224 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence            223567899999999999542    689999988753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.62  E-value=5.7e-15  Score=127.55  Aligned_cols=198  Identities=14%  Similarity=0.087  Sum_probs=134.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc---
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .||||||++.||++++++|.++|++....+  ..|+..+|+.....      ......+.++.+|++|.+++.++++   
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~--~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFE--PVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   80 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCC--EEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccC--cEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            489999999999999999999997522111  12667777654321      1122345789999999998777653   


Q ss_pred             ----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCCCCCCCCCc
Q 044498           96 ----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPEFKQLDTDV  164 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~~~~~~~~~  164 (366)
                          ++|++||+||..........+.   +..+++|+.++..+.+++.+    .+-.  ++|++||..-+..        
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G--~Ii~isS~~~~~~--------  150 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG--HIFFITSVAATKA--------  150 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEECCGGGTSC--------
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCC--ceEEEechhhcCC--------
Confidence                6999999999765433333333   44588999998877776654    3444  8999999754322        


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHH
Q 044498          165 KESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDEC  240 (366)
Q Consensus       165 ~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  240 (366)
                             ......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+.    .   .  +. + .....+...+|+
T Consensus       151 -------~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~----~---~--~~-~-~~~~~~~~Pedv  212 (240)
T d2bd0a1         151 -------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW----G---K--VD-D-EMQALMMMPEDI  212 (240)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT----C---C--CC-S-TTGGGSBCHHHH
T ss_pred             -------CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchh----h---h--cC-H-hhHhcCCCHHHH
Confidence                   1224579999999999999987775   677777755443 1111    1   0  10 1 111235678999


Q ss_pred             HHHHHHHHhcCC
Q 044498          241 VEGVLRLIKSDF  252 (366)
Q Consensus       241 a~~~~~~l~~~~  252 (366)
                      |++++.++..+.
T Consensus       213 A~~v~~l~s~~~  224 (240)
T d2bd0a1         213 AAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHTSCT
T ss_pred             HHHHHHHHcCCc
Confidence            999999997653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.61  E-value=6.2e-15  Score=130.01  Aligned_cols=209  Identities=11%  Similarity=-0.013  Sum_probs=142.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------cccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++++++||||++.||+++++.|+++|++         |++.+|+......         .....+..+.+|+++++++.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~   73 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQ---------VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDD   73 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHH
Confidence            5789999999999999999999999999         9999997643211         012346789999999988777


Q ss_pred             hhc-------CCCEEEEcccccCCcc--ccc---cCcchhhhhhHHHHHHHHHHHHH----cCCCceeEEEEecccccCC
Q 044498           93 MTS-------GVDNMSNLAADMGGMG--FIQ---SNHSVIMYKNTTISFDMLEAARM----NGVMSLTFFFVSSACIYPE  156 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~--~~~---~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~r~I~~SS~~vyg~  156 (366)
                      +++       ++|++||+||......  ...   .+.+..+++|+.+...+.+++.+    .+..  +++++||.+... 
T Consensus        74 ~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g--~ii~~ss~~~~~-  150 (274)
T d1xhla_          74 IINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGE--IVNVSSIVAGPQ-  150 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEECCGGGSSS-
T ss_pred             HHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccc--cccchhhhhccc-
Confidence            653       6999999999643221  111   12345588999998887777654    3443  678777754221 


Q ss_pred             CCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHH-------------HHHHh-C
Q 044498          157 FKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFS-------------RKAVT-S  218 (366)
Q Consensus       157 ~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~-------------~~~~~-~  218 (366)
                                    +......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+.             ...+. .
T Consensus       151 --------------~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  216 (274)
T d1xhla_         151 --------------AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR  216 (274)
T ss_dssp             --------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             --------------cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHH
Confidence                          11224579999999999999888775   788777744332 1111             11111 0


Q ss_pred             CCCeEEecCCcceeeeeeHHHHHHHHHHHHhc-----CCCCcEEecCCCc
Q 044498          219 TDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS-----DFREPLNIGSDEM  263 (366)
Q Consensus       219 ~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~-----~~~~~~~i~~~~~  263 (366)
                      ...+       ....+...+|+|.+++.++..     -.|+++.+.+|..
T Consensus       217 ~~~i-------PlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         217 KECI-------PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             TTTC-------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HcCC-------CCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            1111       122356799999999999842     2688999988864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.61  E-value=2.8e-15  Score=130.61  Aligned_cols=202  Identities=12%  Similarity=0.060  Sum_probs=139.2

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-------cCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-------SGV   97 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-------~~~   97 (366)
                      ++|||||++.||..+++.|.++|++         |.+.+|+.............+..+|+++.+++.+++       .++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~---------V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHT---------VACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCE---------EEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999         999998765433332223356678888876665544       379


Q ss_pred             CEEEEcccccCCcc-ccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCCCCcccccC
Q 044498           98 DNMSNLAADMGGMG-FIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLDTDVKESEA  169 (366)
Q Consensus        98 d~vi~~a~~~~~~~-~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~  169 (366)
                      |++||+||...... ....+   ....+++|+.+...+.+++.    +.+-.  ++|++||...+...            
T Consensus        73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G--~IV~isS~~~~~~~------------  138 (252)
T d1zmta1          73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG--HIIFITSATPFGPW------------  138 (252)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC--EEEEECCSTTTSCC------------
T ss_pred             CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccc--eeeccccccccccc------------
Confidence            99999999653322 22222   34457889998887777654    34444  89999997543221            


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------------HHHHHHHHhCCCCeEEecCCc
Q 044498          170 WPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------------AAFSRKAVTSTDNFEMWGDGK  229 (366)
Q Consensus       170 ~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------------~~~~~~~~~~~~~~~i~~~~~  229 (366)
                         .....|+.+|...+.+.+.++.++   ++++..+.|+.+                 ......+.+ ..+        
T Consensus       139 ---~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~-~~p--------  206 (252)
T d1zmta1         139 ---KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-VTA--------  206 (252)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH-HSS--------
T ss_pred             ---ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh-cCC--------
Confidence               224579999999999999988876   688877743322                 112222222 111        


Q ss_pred             ceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          230 QTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       230 ~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                       ...+...+|+|.++.+++...    .++++.+.+|-
T Consensus       207 -l~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~  242 (252)
T d1zmta1         207 -LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGF  242 (252)
T ss_dssp             -SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCc
Confidence             112567999999999999653    58899998875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.61  E-value=4.3e-15  Score=130.39  Aligned_cols=216  Identities=10%  Similarity=0.000  Sum_probs=136.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------cccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ++|.+|||||++.||++++++|+++|++         |++.+|+......         ....++.++.+|+++++++.+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~---------V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~   74 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAK---------VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDE   74 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHH
Confidence            6789999999999999999999999999         9999997653211         112346899999999988877


Q ss_pred             hhc-------CCCEEEEcccccCCccc-------cccCcchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEeccc-cc
Q 044498           93 MTS-------GVDNMSNLAADMGGMGF-------IQSNHSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSAC-IY  154 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~-vy  154 (366)
                      +++       ++|++||+||.......       ...+.+..+++|+.+...+.+++.+.   +..  ++|.++|.. .+
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g--~iI~~~S~~~~~  152 (264)
T d1spxa_          75 ILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG--EIVNISSIASGL  152 (264)
T ss_dssp             HHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEECCTTSSS
T ss_pred             HHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC--cceeeeeecccc
Confidence            653       69999999997532111       11233456889999988777776542   122  566666532 11


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe-EEe----
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF-EMW----  225 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~-~i~----  225 (366)
                      .               +......|+.+|.+.+.+.+.++.++   |+++..+.|+.+ ..+........... ...    
T Consensus       153 ~---------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~  217 (264)
T d1spxa_         153 H---------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMA  217 (264)
T ss_dssp             S---------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHH
T ss_pred             c---------------cCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHH
Confidence            1               11124569999999999999988875   678777744432 11111100000000 000    


Q ss_pred             --cCCcceeeeeeHHHHHHHHHHHHhc---C--CCCcEEecCCCc
Q 044498          226 --GDGKQTRSLTFIDECVEGVLRLIKS---D--FREPLNIGSDEM  263 (366)
Q Consensus       226 --~~~~~~~~~i~v~D~a~~~~~~l~~---~--~~~~~~i~~~~~  263 (366)
                        ........+...+|+|+++..++..   .  .|+++.+.+|..
T Consensus       218 ~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         218 TMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence              0000112356789999999999842   2  688899988754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.61  E-value=7.8e-15  Score=127.54  Aligned_cols=163  Identities=16%  Similarity=0.092  Sum_probs=116.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHH---cCCCCCCCCCccEEEEEeCCCccccc-----cccccceEEEccCCChhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKS---ERHYSTSIPNALYIIASDWNKNEHMM-----EDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~---~g~~~~~~~~~~~V~~~~r~~~~~~~-----~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      |++||||||++.||.+++++|++   +|++         |++.+|+......     ....++.++.+|++|++++.+++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   72 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQH---------LFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV   72 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSE---------EEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCE---------EEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHH
Confidence            68999999999999999999985   5888         9999998764321     12346789999999998776543


Q ss_pred             ---------cCCCEEEEcccccCCcccc-ccC---cchhhhhhHHHHHHHHHHHHHc---------------CCCceeEE
Q 044498           95 ---------SGVDNMSNLAADMGGMGFI-QSN---HSVIMYKNTTISFDMLEAARMN---------------GVMSLTFF  146 (366)
Q Consensus        95 ---------~~~d~vi~~a~~~~~~~~~-~~~---~~~~~~~nv~~~~~ll~a~~~~---------------~~~~~r~I  146 (366)
                               .++|++||+||........ ..+   ....+++|+.++..+.+++...               +..  ++|
T Consensus        73 ~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g--~ii  150 (248)
T d1snya_          73 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRA--AII  150 (248)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTC--EEE
T ss_pred             hhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccc--ccc
Confidence                     2589999999975432222 223   2345889999988887766431               233  799


Q ss_pred             EEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH
Q 044498          147 FVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP  208 (366)
Q Consensus       147 ~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~  208 (366)
                      .+||..  |.....          +......|+.||++...+.+.++.++   ++++..+.|+.+
T Consensus       151 ~i~S~~--g~~~~~----------~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v  203 (248)
T d1snya_         151 NMSSIL--GSIQGN----------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWV  203 (248)
T ss_dssp             EECCGG--GCSTTC----------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSB
T ss_pred             cccccc--cccCCC----------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcc
Confidence            999853  211111          12234579999999999988887665   688888866654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.61  E-value=2.2e-15  Score=133.12  Aligned_cols=214  Identities=12%  Similarity=0.049  Sum_probs=138.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      +++++|||||++.||+++++.|.++|++         |++++|+.++...   .....+..+.+|+++.+++.++++   
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~---------V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   74 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAK---------VAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCV   74 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHH
Confidence            6789999999999999999999999999         9999997653221   123346889999999988777653   


Q ss_pred             ----CCCEEEEcccccCCcccccc--------CcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCC
Q 044498           96 ----GVDNMSNLAADMGGMGFIQS--------NHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        96 ----~~d~vi~~a~~~~~~~~~~~--------~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                          .+|++||+||..........        +.+..+++|+.++..+.+++.    +.+ .  ++|++||...+-.   
T Consensus        75 ~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g--~iI~i~S~~~~~~---  148 (276)
T d1bdba_          75 ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-G--NVIFTISNAGFYP---  148 (276)
T ss_dssp             HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C--EEEEECCGGGTST---
T ss_pred             HHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-C--CceeeeechhccC---
Confidence                79999999997543211111        134558899999887776664    334 3  7888888543211   


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CcEEEeCCCcH-HH--------HHHHHHhCCCCeEEecCC
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE--IECRLVGEKAP-AA--------FSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~--~~~~i~r~~~~-~~--------~~~~~~~~~~~~~i~~~~  228 (366)
                                  ......|+.+|...+.+.+.++.+++  +++..+.|+.+ ..        ..................
T Consensus       149 ------------~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (276)
T d1bdba_         149 ------------NGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV  216 (276)
T ss_dssp             ------------TSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc
Confidence                        11245699999999999999988874  45544433222 00        000000000000000011


Q ss_pred             cceeeeeeHHHHHHHHHHHHh--c-C--CCCcEEecCCC
Q 044498          229 KQTRSLTFIDECVEGVLRLIK--S-D--FREPLNIGSDE  262 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~--~-~--~~~~~~i~~~~  262 (366)
                      .....+...+|+|.++..++.  . .  .++++++.+|-
T Consensus       217 ~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         217 LPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             CTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             CCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            112235568999999998873  2 2  58999998874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.60  E-value=1.1e-14  Score=128.18  Aligned_cols=210  Identities=11%  Similarity=0.029  Sum_probs=141.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---------cccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---------EDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---------~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +++++|||||++.||+++++.|.++|++         |++.+|+......         .....+..+.+|+++++++.+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~---------V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~   74 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGAN---------VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQ   74 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHH
Confidence            6789999999999999999999999999         9999997643211         112346789999999998777


Q ss_pred             hhc-------CCCEEEEcccccCCcccc----ccC---cchhhhhhHHHHHHHHHHHHHc---CCCceeEEEEec-cccc
Q 044498           93 MTS-------GVDNMSNLAADMGGMGFI----QSN---HSVIMYKNTTISFDMLEAARMN---GVMSLTFFFVSS-ACIY  154 (366)
Q Consensus        93 ~~~-------~~d~vi~~a~~~~~~~~~----~~~---~~~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS-~~vy  154 (366)
                      +++       ++|++||+||........    +.+   ....+++|+.++..+.+++.+.   +..  ++|.++| .+..
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g--~iI~~~Ss~a~~  152 (272)
T d1xkqa_          75 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG--EIVNVSSIVAGP  152 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEECCGGGSS
T ss_pred             HHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC--ccccccchhccc
Confidence            653       699999999976432211    111   3445788999988888776542   222  4555554 3221


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHH-------------HH-
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRK-------------AV-  216 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~-------------~~-  216 (366)
                      .               +......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+...             .. 
T Consensus       153 ~---------------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  217 (272)
T d1xkqa_         153 Q---------------AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA  217 (272)
T ss_dssp             S---------------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred             c---------------CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHH
Confidence            1               11224579999999999999988775   788877744432 111111             11 


Q ss_pred             hCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhc---C--CCCcEEecCCCcc
Q 044498          217 TSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS---D--FREPLNIGSDEMV  264 (366)
Q Consensus       217 ~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~---~--~~~~~~i~~~~~~  264 (366)
                      .....+       ....+...+|+|+++.+++..   .  .++++.+.+|..+
T Consensus       218 ~~~~~~-------PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         218 SHKECI-------PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HCTTTC-------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhcCC-------CCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            111111       122356799999999999832   2  6889999888654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.59  E-value=4.3e-14  Score=122.89  Aligned_cols=212  Identities=11%  Similarity=0.003  Sum_probs=134.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc---cccccceEEEccCCChhHHHhhhc---
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM---EDMFCHEFHLVDLRVMDNCLRMTS---   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~---~~~~~v~~~~~D~~~~~~l~~~~~---   95 (366)
                      .+++||||||++.||.+++++|+++|+.       ++|++.+|+..+...   ....++.++.+|+++.++++++++   
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~-------~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~   74 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-------RHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVG   74 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTC-------CEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCC-------CEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHH
Confidence            4579999999999999999999999963       117777887654322   123457899999999987766542   


Q ss_pred             ------CCCEEEEcccccCCccc-cccC---cchhhhhhHHHHHHHHHHHHHc----C---------CCceeEEEEeccc
Q 044498           96 ------GVDNMSNLAADMGGMGF-IQSN---HSVIMYKNTTISFDMLEAARMN----G---------VMSLTFFFVSSAC  152 (366)
Q Consensus        96 ------~~d~vi~~a~~~~~~~~-~~~~---~~~~~~~nv~~~~~ll~a~~~~----~---------~~~~r~I~~SS~~  152 (366)
                            ++|++||+||....... ...+   ....+++|+.++..+.+++...    +         ....+++.+|+..
T Consensus        75 ~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~  154 (250)
T d1yo6a1          75 EIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             HHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             HHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccc
Confidence                  48999999997643221 1222   3456889999998887776431    0         0011577777754


Q ss_pred             ccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcHH-HHHHHHHhCCCCeEEecCC
Q 044498          153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA-AFSRKAVTSTDNFEMWGDG  228 (366)
Q Consensus       153 vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~~-~~~~~~~~~~~~~~i~~~~  228 (366)
                      .+-......        .+..|...|+.||++...+.+.++.++   ++++..+-|+.+. .+..      .        
T Consensus       155 ~~~~~~~~~--------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~------~--------  212 (250)
T d1yo6a1         155 GSITDNTSG--------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG------K--------  212 (250)
T ss_dssp             GCSTTCCST--------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------
T ss_pred             ccccCCccc--------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC------C--------
Confidence            432211110        123455679999999999999988875   6888777666542 2211      0        


Q ss_pred             cceeeeeeHHHHHHHHHHHHhcC---CCCcEEecCCCccc
Q 044498          229 KQTRSLTFIDECVEGVLRLIKSD---FREPLNIGSDEMVS  265 (366)
Q Consensus       229 ~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~i~~~~~~s  265 (366)
                         ...+..++.++.++..+...   ..+.|...+++++.
T Consensus       213 ---~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~  249 (250)
T d1yo6a1         213 ---NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ---------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             ---CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence               01245688888888888653   23334444555543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=5.6e-15  Score=130.99  Aligned_cols=212  Identities=16%  Similarity=0.062  Sum_probs=136.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe---CCCcccc---------ccccccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD---WNKNEHM---------MEDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~---r~~~~~~---------~~~~~~v~~~~~D~~~~~~l~   91 (366)
                      +.||||||++.||+++++.|.++|.+         |+.+.   |......         ......+..+.+|++|.+++.
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~---------v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   73 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQ---------SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVA   73 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTC---------CEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCC---------eEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhh
Confidence            45789999999999999999999987         55443   3322111         112335688999999999888


Q ss_pred             hhhc-----CCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCC
Q 044498           92 RMTS-----GVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        92 ~~~~-----~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                      ++++     .+|++||+|+..........+.   ...+++|+.++.++.+++.    +.+-.  ++|++||..-.-    
T Consensus        74 ~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G--~Iv~isS~~g~~----  147 (285)
T d1jtva_          74 AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG--RVLVTGSVGGLM----  147 (285)
T ss_dssp             HHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE--EEEEEEEGGGTS----
T ss_pred             hhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCC--ceEEEechhhcC----
Confidence            7653     5899999999876543333333   3448899999888777654    34544  899999964321    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhC------CCCeEEec---
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTS------TDNFEMWG---  226 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~------~~~~~i~~---  226 (366)
                                 +......|+.+|.+.+.+.+.++.++   |+++..+.|+.+ ..+.......      .....-..   
T Consensus       148 -----------~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (285)
T d1jtva_         148 -----------GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFY  216 (285)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHH
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHH
Confidence                       11224579999999999999988875   788877754433 3333222210      00000000   


Q ss_pred             ------CCcceeeeeeHHHHHHHHHHHHhcCCCCcEEecCC
Q 044498          227 ------DGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSD  261 (366)
Q Consensus       227 ------~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~i~~~  261 (366)
                            ...........+|+|++++.+++.+.....++.+.
T Consensus       217 ~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~  257 (285)
T d1jtva_         217 QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTE  257 (285)
T ss_dssp             HHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred             HHHHHHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence                  00000123468999999999998877777777653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.57  E-value=8.1e-15  Score=130.74  Aligned_cols=218  Identities=10%  Similarity=-0.089  Sum_probs=137.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-------ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|.||++++++|+++|++         |++++|+..+..       ......+..+.+|+++.+++.+++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~---------Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~   94 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQ---------CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV   94 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHh
Confidence            6699999999999999999999999999         999999865321       112234578899999998877654


Q ss_pred             -------cCCCEEEEcccccCCccccccCc---chhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCC
Q 044498           95 -------SGVDNMSNLAADMGGMGFIQSNH---SVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 -------~~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             .++|++||+||..........+.   ...+.+|......+...+.    ..... ..++.+||.....     
T Consensus        95 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~~i~~~ss~~~~~-----  168 (294)
T d1w6ua_          95 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG-AAFLSITTIYAET-----  168 (294)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEECCTHHHH-----
T ss_pred             hhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccccccc-ccccccccchhhh-----
Confidence                   36999999999765332222222   2335567666655544332    22222 1566666643221     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCC-eEEecCCcceeeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDN-FEMWGDGKQTRSLT  235 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~-~~i~~~~~~~~~~i  235 (366)
                                +......|+.+|.+.+.+.+.++.++   |+++..+.++.+ ..+.......... ..-.........+.
T Consensus       169 ----------~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~  238 (294)
T d1w6ua_         169 ----------GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLG  238 (294)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCB
T ss_pred             ----------cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCC
Confidence                      11224569999999999999998775   677777744433 1221111110000 00000011122356


Q ss_pred             eHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          236 FIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      ..+|+|+++..++...    .|+++.+.+|..+
T Consensus       239 ~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         239 TVEELANLAAFLCSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence            7999999999998542    6889999888643

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=8.7e-15  Score=126.55  Aligned_cols=195  Identities=15%  Similarity=0.024  Sum_probs=136.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhhc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .++.++||||++-||++++++|.++|++         |++.+|+..+..      .....++..+.+|++|++++.++++
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~---------V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   76 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSK---------LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK   76 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            6789999999999999999999999999         999999765321      1122356899999999988777653


Q ss_pred             -------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccCCCCCCC
Q 044498           96 -------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYPEFKQLD  161 (366)
Q Consensus        96 -------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg~~~~~~  161 (366)
                             .+|++||+||..........+   .+..+++|+.+..++.+++.    +.+-.  ++|++||...+-.     
T Consensus        77 ~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G--~Iv~isS~~~~~~-----  149 (244)
T d1yb1a_          77 KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG--HIVTVASAAGHVS-----  149 (244)
T ss_dssp             HHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE--EEEEECCCC-CCC-----
T ss_pred             HHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCc--eEEEeecchhcCC-----
Confidence                   699999999987543332222   23458899999887777654    44544  8999999654321     


Q ss_pred             CCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc------CCcEEEeCCCcHHHHHHHHHhCCCCeEEecCCcceeeee
Q 044498          162 TDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF------EIECRLVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLT  235 (366)
Q Consensus       162 ~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~------~~~~~i~r~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  235 (366)
                                ......|+.+|.+...+.+.++.+.      |+.+..+.|+.+..   .+.+ ...       ......+
T Consensus       150 ----------~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T---~~~~-~~~-------~~~~~~~  208 (244)
T d1yb1a_         150 ----------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT---GFIK-NPS-------TSLGPTL  208 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH---CSTT-CTH-------HHHCCCC
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCC---hhhh-CcC-------ccccCCC
Confidence                      1124579999999999999988763      67887876654421   1111 110       1112245


Q ss_pred             eHHHHHHHHHHHHhcCCC
Q 044498          236 FIDECVEGVLRLIKSDFR  253 (366)
Q Consensus       236 ~v~D~a~~~~~~l~~~~~  253 (366)
                      ..+|+++.+...+.....
T Consensus       209 ~pe~va~~i~~~~~~~~~  226 (244)
T d1yb1a_         209 EPEEVVNRLMHGILTEQK  226 (244)
T ss_dssp             CHHHHHHHHHHHHHTTCS
T ss_pred             CHHHHHHHHHHHHhcCCc
Confidence            689999999887766543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.55  E-value=6.4e-14  Score=122.48  Aligned_cols=201  Identities=10%  Similarity=-0.006  Sum_probs=136.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~~l~~   92 (366)
                      ...+||||||+|.||.+++++|.++|+.+        |+.+.|+.....         ......+.++.+|++|.+++.+
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~--------vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~   79 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPH--------LLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRE   79 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSE--------EEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCE--------EEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHH
Confidence            34589999999999999999999999841        666777532211         1122357899999999998888


Q ss_pred             hhc------CCCEEEEcccccCCccccccCcch---hhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCC
Q 044498           93 MTS------GVDNMSNLAADMGGMGFIQSNHSV---IMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD  163 (366)
Q Consensus        93 ~~~------~~d~vi~~a~~~~~~~~~~~~~~~---~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~  163 (366)
                      +++      .+|.|||+++..........+.+.   .+..|+.+..++.+++...+..  +||++||....-..      
T Consensus        80 ~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~--~iv~~SS~a~~~g~------  151 (259)
T d2fr1a1          80 LLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLT--AFVLFSSFASAFGA------  151 (259)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCS--EEEEEEEHHHHTCC------
T ss_pred             hhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCc--eEeeecchhhccCC------
Confidence            764      478999999977654333333333   3778999999999998888777  89999996543211      


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHcCCcEEEeCCCcH--HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHH
Q 044498          164 VKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAP--AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECV  241 (366)
Q Consensus       164 ~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~~~~~~i~r~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  241 (366)
                               .....|+.+|...+.+..++.. .|++++.+.++.+  ..+......  ..  +  .... ...+..++++
T Consensus       152 ---------~~~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~~~~--~~--~--~~~G-~~~~~~~~~~  214 (259)
T d2fr1a1         152 ---------PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEGPVA--DR--F--RRHG-VIEMPPETAC  214 (259)
T ss_dssp             ---------TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC----------------C--TTTT-EECBCHHHHH
T ss_pred             ---------cccHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccchHH--HH--H--HhcC-CCCCCHHHHH
Confidence                     1245699999999988877655 4888887754432  112221111  00  0  1111 2346789999


Q ss_pred             HHHHHHHhcCCCCc
Q 044498          242 EGVLRLIKSDFREP  255 (366)
Q Consensus       242 ~~~~~~l~~~~~~~  255 (366)
                      +++..++.+.....
T Consensus       215 ~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         215 RALQNALDRAEVCP  228 (259)
T ss_dssp             HHHHHHHHTTCSSC
T ss_pred             HHHHHHHhCCCceE
Confidence            99999998765443

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.55  E-value=3.4e-14  Score=122.43  Aligned_cols=199  Identities=14%  Similarity=0.097  Sum_probs=131.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHh-------hh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLR-------MT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~-------~~   94 (366)
                      ++|+||||||+|.||.++++.|.++|++         |.++++.........    ..+..+..+.+....       .+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~---------V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWW---------VASIDVVENEEASAS----VIVKMTDSFTEQADQVTAEVGKLL   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCE---------EEEEESSCCTTSSEE----EECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEeCCcccccccc----ceeecccCcHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999         999988765432221    334445444433222       22


Q ss_pred             c--CCCEEEEcccccCCcccccc----CcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCccccc
Q 044498           95 S--GVDNMSNLAADMGGMGFIQS----NHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESE  168 (366)
Q Consensus        95 ~--~~d~vi~~a~~~~~~~~~~~----~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~  168 (366)
                      .  ++|++||+||..........    +.+..+++|+.+..++.+++.++-.++.++|++||......            
T Consensus        68 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~------------  135 (236)
T d1dhra_          68 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG------------  135 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------
T ss_pred             CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC------------
Confidence            2  48999999985322111111    23345889999999888888764222238999999754322            


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHH
Q 044498          169 AWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVE  242 (366)
Q Consensus       169 ~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  242 (366)
                         ......|+.+|.+.+.+.+.++.++     ++++..+.|+.+ ..+...... ..         ..-.++..+++++
T Consensus       136 ---~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~-~~---------~~~~~~~pe~va~  202 (236)
T d1dhra_         136 ---TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP-EA---------DFSSWTPLEFLVE  202 (236)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST-TS---------CGGGSEEHHHHHH
T ss_pred             ---ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc-cc---------hhhcCCCHHHHHH
Confidence               1224579999999999999998764     577777765544 333333222 11         1124678999999


Q ss_pred             HHHHHHhcC----CCCcEEe
Q 044498          243 GVLRLIKSD----FREPLNI  258 (366)
Q Consensus       243 ~~~~~l~~~----~~~~~~i  258 (366)
                      .+..++...    .|+.+.+
T Consensus       203 ~~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         203 TFHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHHTTTTCCCTTCEEEE
T ss_pred             HHHHHhCCCccCCCCCeEEE
Confidence            999998653    3555554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.50  E-value=1e-13  Score=119.38  Aligned_cols=197  Identities=14%  Similarity=0.056  Sum_probs=128.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH-------hhh--
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL-------RMT--   94 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~-------~~~--   94 (366)
                      .|||||||+|.||.+++++|.++|++         |++++|.........    ..+.+|..+.+...       ..+  
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~---------V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYT---------VLNIDLSANDQADSN----ILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEE---------EEEEESSCCTTSSEE----EECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCE---------EEEEECCchhccccc----ceeccccCchhHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999         999999876433221    34445555443222       222  


Q ss_pred             cCCCEEEEcccccCCccccccC----cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCC
Q 044498           95 SGVDNMSNLAADMGGMGFIQSN----HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAW  170 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~----~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~  170 (366)
                      .++|++||+||..........+    .+..+++|+.++..+.+++..+-.++.++|++||...+...             
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~-------------  136 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-------------  136 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-------------
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc-------------
Confidence            2589999999964321111222    23347899999988888887652222389999997543321             


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHH
Q 044498          171 PAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV  244 (366)
Q Consensus       171 ~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  244 (366)
                        .....|+.+|.+.+.+.+.++.++     ++++..+.+..+ ..+...... ..         ....++..+|+++.+
T Consensus       137 --~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~-~~---------~~~~~~~~~~va~~~  204 (235)
T d1ooea_         137 --PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP-NA---------DHSSWTPLSFISEHL  204 (235)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST-TC---------CGGGCBCHHHHHHHH
T ss_pred             --ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc-CC---------ccccCCCHHHHHHHH
Confidence              224679999999999999998775     344544544433 444444432 11         112467899999998


Q ss_pred             HHHHhcC-----CCCcEEe
Q 044498          245 LRLIKSD-----FREPLNI  258 (366)
Q Consensus       245 ~~~l~~~-----~~~~~~i  258 (366)
                      +.++..+     .+..+.+
T Consensus       205 ~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         205 LKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHCGGGCCCTTCEEEE
T ss_pred             HHHhcCccccCCCceEEEE
Confidence            7666432     3555555

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.4e-13  Score=119.44  Aligned_cols=210  Identities=14%  Similarity=0.032  Sum_probs=134.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---ccccceEEEccCCChhHHHhhh----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---DMFCHEFHLVDLRVMDNCLRMT----   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---~~~~v~~~~~D~~~~~~l~~~~----   94 (366)
                      +++.+|||||++.||.+++++|.++|++         |++++|+.......   ..........|+.+...+....    
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~---------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   74 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGAS---------AVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAK   74 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccc
Confidence            6789999999999999999999999999         99999987643221   1234577888888876555433    


Q ss_pred             ---cCCCEEEEcccccCCcccc------c---cCcchhhhhhHHHHHHHHHHHHHc--------CCCceeEEEEeccccc
Q 044498           95 ---SGVDNMSNLAADMGGMGFI------Q---SNHSVIMYKNTTISFDMLEAARMN--------GVMSLTFFFVSSACIY  154 (366)
Q Consensus        95 ---~~~d~vi~~a~~~~~~~~~------~---~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~r~I~~SS~~vy  154 (366)
                         ...|.++++++........      .   .+....+++|+.++.++.+++...        +.+..++|++||...+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~  154 (248)
T d2o23a1          75 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  154 (248)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             cccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc
Confidence               3688888887654321111      1   123345789999999999888653        1111279999997543


Q ss_pred             CCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcc
Q 044498          155 PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       155 g~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~  230 (366)
                      -               +......|+.+|...+.+.+.++.++   |+++..+.|+.+ ..+..........  ...+...
T Consensus       155 ~---------------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~p  217 (248)
T d2o23a1         155 E---------------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN--FLASQVP  217 (248)
T ss_dssp             H---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------C--HHHHTCS
T ss_pred             c---------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHH--HHHhcCC
Confidence            2               11235679999999999999998886   567766644432 1222211110000  0000000


Q ss_pred             e-eeeeeHHHHHHHHHHHHhcC--CCCcEE
Q 044498          231 T-RSLTFIDECVEGVLRLIKSD--FREPLN  257 (366)
Q Consensus       231 ~-~~~i~v~D~a~~~~~~l~~~--~~~~~~  257 (366)
                      . ..+...+|+|++++.++..+  .|++.+
T Consensus       218 l~~R~g~peevA~~v~fL~s~~~itGq~I~  247 (248)
T d2o23a1         218 FPSRLGDPAEYAHLVQAIIENPFLNGEVIR  247 (248)
T ss_dssp             SSCSCBCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             CCCCCcCHHHHHHHHHHHHhCCCCCceEeE
Confidence            0 12567899999999998754  355554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=1.7e-13  Score=119.75  Aligned_cols=206  Identities=16%  Similarity=0.076  Sum_probs=136.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHH---cCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKS---ERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~---~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l   90 (366)
                      .++.++||||++.||.+++++|.+   +|++         |++++|+.......        ....+.++.+|+++++++
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~---------Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v   75 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSV---------MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCE---------EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCE---------EEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            567899999999999999999986   6899         99999976532211        123568899999999887


Q ss_pred             Hhhhc-----------CCCEEEEcccccCCcc---ccccC---cchhhhhhHHHHHHHHHHHHHcCC----CceeEEEEe
Q 044498           91 LRMTS-----------GVDNMSNLAADMGGMG---FIQSN---HSVIMYKNTTISFDMLEAARMNGV----MSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~-----------~~d~vi~~a~~~~~~~---~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~----~~~r~I~~S  149 (366)
                      .++++           ..|++||+||..+...   ....+   ....+++|+.++..+.+++.+.=.    ...++|++|
T Consensus        76 ~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~is  155 (259)
T d1oaaa_          76 QRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNIS  155 (259)
T ss_dssp             HHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEEC
T ss_pred             HHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccc
Confidence            77642           3579999999654211   12222   344588999999999998876421    123799999


Q ss_pred             cccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-CCcEEEeCCCcH-HHHHHHHHhCCCCeEEe--
Q 044498          150 SACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-EIECRLVGEKAP-AAFSRKAVTSTDNFEMW--  225 (366)
Q Consensus       150 S~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~--  225 (366)
                      |...+.               +......|+.+|...+.+.+.++.+. ++++..+.|+.+ ..+..............  
T Consensus       156 S~~~~~---------------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~  220 (259)
T d1oaaa_         156 SLCALQ---------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             CGGGTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             cccccC---------------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHH
Confidence            964432               12235679999999999999988774 577766655543 33333332211110000  


Q ss_pred             -cCCcceeeeeeHHHHHHHHHHHHhcC
Q 044498          226 -GDGKQTRSLTFIDECVEGVLRLIKSD  251 (366)
Q Consensus       226 -~~~~~~~~~i~v~D~a~~~~~~l~~~  251 (366)
                       ........+...+|+|++++.++...
T Consensus       221 ~~~~~~~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         221 LQKLKSDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHHHHHTTCSBCHHHHHHHHHHHHHHC
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhhhc
Confidence             00001112467899999999998653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.4e-13  Score=121.45  Aligned_cols=201  Identities=16%  Similarity=0.070  Sum_probs=130.1

Q ss_pred             CCeE-EEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCcccc------ccccccceEEEccCCChhHHHhhh
Q 044498           23 KLRI-SSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHM------MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        23 ~~~v-lItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~------~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +|+| |||||++.||.+++++|+++ |++         |++.+|+..+..      ......+.++.+|+++.+++++++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~---------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~   72 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGD---------VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALR   72 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSE---------EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCE---------EEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHH
Confidence            3555 89999999999999999986 888         999999865422      112345789999999998877654


Q ss_pred             c-------CCCEEEEcccccCCccccccC---cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC-CC--
Q 044498           95 S-------GVDNMSNLAADMGGMGFIQSN---HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ-LD--  161 (366)
Q Consensus        95 ~-------~~d~vi~~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~-~~--  161 (366)
                      +       ++|++||+||..........+   ....+++|+.++..+.+++...=.++.|+|++||......... .|  
T Consensus        73 ~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~  152 (275)
T d1wmaa1          73 DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPEL  152 (275)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHH
T ss_pred             HHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhh
Confidence            2       699999999986543222222   2345889999999999988764212238999999543211000 00  


Q ss_pred             ------CCcc-----------------cccCCCCCCCCchHHHHHHHHHHHHHHHHHc-------CCcEEEeCCCcH-HH
Q 044498          162 ------TDVK-----------------ESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-------EIECRLVGEKAP-AA  210 (366)
Q Consensus       162 ------~~~~-----------------e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-------~~~~~i~r~~~~-~~  210 (366)
                            ....                 .....+..|...|+.+|+....+.+.++.++       ++.+..+.|+.+ ..
T Consensus       153 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~  232 (275)
T d1wmaa1         153 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  232 (275)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             hhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence                  0000                 0000133456789999999888777665553       677777755543 11


Q ss_pred             HHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHh
Q 044498          211 FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK  249 (366)
Q Consensus       211 ~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  249 (366)
                      +     .        . ..   -....+|.|+.++.+..
T Consensus       233 m-----~--------~-~~---~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         233 M-----A--------G-PK---ATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             T-----T--------C-TT---CSBCHHHHTHHHHHHHS
T ss_pred             c-----c--------c-Cc---ccCCHHHHHHHHHHHHc
Confidence            1     0        0 00   12247888988887653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=6.7e-13  Score=116.47  Aligned_cols=200  Identities=14%  Similarity=0.046  Sum_probs=135.0

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc-------cccccceEEEccCCChhHHHhh
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM-------EDMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~-------~~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .+++++|||||++.||.+++++|+++|++         |++++|+......       .....+..+.+|+.+.+.....
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~---------Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   82 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAH---------VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQF   82 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHH
Confidence            47799999999999999999999999999         9999998653221       1223456888899887766554


Q ss_pred             h-------cCCCEEEEcccccCCccccccCcc---hhhhhhHHHHHHHHHHHHHc---CCCceeEEEEecccccCCCCCC
Q 044498           94 T-------SGVDNMSNLAADMGGMGFIQSNHS---VIMYKNTTISFDMLEAARMN---GVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        94 ~-------~~~d~vi~~a~~~~~~~~~~~~~~---~~~~~nv~~~~~ll~a~~~~---~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                      .       ...|+++++|+..........+.+   ..+++|+.+...+.+++...   +-.  ++|++||.+.+-     
T Consensus        83 ~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G--~ii~isS~~~~~-----  155 (269)
T d1xu9a_          83 VAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNG--SIVVVSSLAGKV-----  155 (269)
T ss_dssp             HHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--EEEEEEEGGGTS-----
T ss_pred             HHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCC--cceEeccchhcC-----
Confidence            3       368999999997654333333333   34788998877776666431   123  799999965421     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc-----CCcEEEeCCCcH-HHHHHHHHhCCCCeEEecCCcceeee
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF-----EIECRLVGEKAP-AAFSRKAVTSTDNFEMWGDGKQTRSL  234 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~-----~~~~~i~r~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (366)
                                +......|+.||.+.+.+.+.++.++     ++++..+.++.+ ..+...... +.         .....
T Consensus       156 ----------~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~-~~---------~~~~~  215 (269)
T d1xu9a_         156 ----------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS-GI---------VHMQA  215 (269)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC-GG---------GGGGC
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc-CC---------ccccC
Confidence                      12235689999999999999887764     466666655433 444443332 11         11123


Q ss_pred             eeHHHHHHHHHHHHhcCCCCcE
Q 044498          235 TFIDECVEGVLRLIKSDFREPL  256 (366)
Q Consensus       235 i~v~D~a~~~~~~l~~~~~~~~  256 (366)
                      ...+++++.++..+.....++|
T Consensus       216 ~~~e~~a~~i~~~~~~~~~~i~  237 (269)
T d1xu9a_         216 APKEECALEIIKGGALRQEEVY  237 (269)
T ss_dssp             BCHHHHHHHHHHHHHTTCSEEE
T ss_pred             CCHHHHHHHHHHHhhcCCCEEE
Confidence            4578899888887765544443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.42  E-value=3.7e-12  Score=112.45  Aligned_cols=209  Identities=13%  Similarity=0.116  Sum_probs=133.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------cc-----------------ccce
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DM-----------------FCHE   78 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~-----------------~~v~   78 (366)
                      ..+|||||++.||++++++|.++|++         |++.++........        ..                 ..+.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~---------V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~   73 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYA---------VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA   73 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC--
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCE---------EEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccc
Confidence            46899999999999999999999999         98887654321110        00                 1123


Q ss_pred             EEEccCCChhHHHhhh-------cCCCEEEEcccccCCccccccCcc-----------------hhhhhhHHHHHHHHHH
Q 044498           79 FHLVDLRVMDNCLRMT-------SGVDNMSNLAADMGGMGFIQSNHS-----------------VIMYKNTTISFDMLEA  134 (366)
Q Consensus        79 ~~~~D~~~~~~l~~~~-------~~~d~vi~~a~~~~~~~~~~~~~~-----------------~~~~~nv~~~~~ll~a  134 (366)
                      ...+|+++.+++.+++       .++|++||+||..........+.+                 ..+.+|+.+...+.++
T Consensus        74 ~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  153 (284)
T d1e7wa_          74 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  153 (284)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecc
Confidence            3456688887777654       379999999997653222211111                 1367788888887777


Q ss_pred             HHHc--------CCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEe
Q 044498          135 ARMN--------GVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLV  203 (366)
Q Consensus       135 ~~~~--------~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~  203 (366)
                      +.+.        .....++|+++|.....               +......|+.+|...+.+.+.++.++   |+++..+
T Consensus       154 ~~~~~~~~~~~~~~~~~~ii~~~s~~~~~---------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I  218 (284)
T d1e7wa_         154 FAHRVAGTPAKHRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGV  218 (284)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             ccchhhhhHHHhcCCCCcccccccccccC---------------CccceeeeccccccchhhhHHHHHHhCCcccccccc
Confidence            5432        11112577777653221               22235679999999999999998876   6777666


Q ss_pred             CCCc-------HHHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCccc
Q 044498          204 GEKA-------PAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMVS  265 (366)
Q Consensus       204 r~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~s  265 (366)
                      .++.       ...+...... ..+  +.      ..+...+|+|+++.+++...    .|+++.+.+|..++
T Consensus       219 ~PG~t~~~~~~~~~~~~~~~~-~~p--l~------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         219 GPGLSVLVDDMPPAVWEGHRS-KVP--LY------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             EESSBCCGGGSCHHHHHHHHT-TCT--TT------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccccccccccCCHHHHHHHHh-cCC--CC------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            4332       1333333333 111  10      12456999999999998542    58899999887654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.42  E-value=2e-12  Score=112.73  Aligned_cols=209  Identities=12%  Similarity=0.018  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      .+++||||||+|  -||.++++.|+++|++         |++.+|+.....     .........+..|+.+..+....+
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~---------V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAE---------LAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF   74 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCE---------EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCE---------EEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHH
Confidence            678999999999  7999999999999999         999998754221     112224578888999887666544


Q ss_pred             -------cCCCEEEEcccccCCccccccC--------cchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCCC
Q 044498           95 -------SGVDNMSNLAADMGGMGFIQSN--------HSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQ  159 (366)
Q Consensus        95 -------~~~d~vi~~a~~~~~~~~~~~~--------~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~  159 (366)
                             ...|++||+++...........        ....+..|+.+...+.+++...-.++..+|++||.....    
T Consensus        75 ~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~----  150 (258)
T d1qsga_          75 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----  150 (258)
T ss_dssp             HHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----
T ss_pred             HHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc----
Confidence                   2579999999876432211111        112245666677777777765422212688888854211    


Q ss_pred             CCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEe
Q 044498          160 LDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMW  225 (366)
Q Consensus       160 ~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~  225 (366)
                                 +......|+.+|.+.+.+.+.++.++   ++++..+.|+.+           ......... ..+    
T Consensus       151 -----------~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~p----  214 (258)
T d1qsga_         151 -----------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEA-VTP----  214 (258)
T ss_dssp             -----------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHH-HST----
T ss_pred             -----------CCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHh-CCC----
Confidence                       11224679999999999999998887   467766644332           112222222 111    


Q ss_pred             cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          226 GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       226 ~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                           ...+...+|+|.++..++...    .++++.+.+|..+
T Consensus       215 -----l~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         215 -----IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             -----TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHH
Confidence                 122567999999999999542    5888999888543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.39  E-value=1.1e-12  Score=113.09  Aligned_cols=201  Identities=12%  Similarity=0.030  Sum_probs=132.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc------CC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS------GV   97 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~------~~   97 (366)
                      |++|||||++.||++++++|.++|++         |++.+|+....      ....+.+|+.+......+..      ..
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~---------V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYR---------VVVLDLRREGE------DLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCE---------EEEEESSCCSS------SSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCcccc------cceEeeccccchhhhHHHHHhhhccccc
Confidence            68999999999999999999999999         99999875432      23677899998766555432      34


Q ss_pred             CEEEEcccccCCcccc-------ccCcchhhhhhHHHHHHHHHHHHHc--------CCCceeEEEEecccccCCCCCCCC
Q 044498           98 DNMSNLAADMGGMGFI-------QSNHSVIMYKNTTISFDMLEAARMN--------GVMSLTFFFVSSACIYPEFKQLDT  162 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~-------~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~r~I~~SS~~vyg~~~~~~~  162 (366)
                      +.++++++........       ....+..+++|+.+...+...+...        ..+..++|++||...+-.      
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------  140 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------  140 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC------
Confidence            5555555533221111       1122345788888888777766542        011137999999654321      


Q ss_pred             CcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHH--------HHHHHhCCCCeEEecCCcc
Q 044498          163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAF--------SRKAVTSTDNFEMWGDGKQ  230 (366)
Q Consensus       163 ~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~--------~~~~~~~~~~~~i~~~~~~  230 (366)
                               ......|+.+|...+.+.+.++.++   |+++..+.++.+ ..+        ...... ..+  +.     
T Consensus       141 ---------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~-~~~--~~-----  203 (241)
T d1uaya_         141 ---------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAA-QVP--FP-----  203 (241)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHT-TCC--SS-----
T ss_pred             ---------CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHh-cCC--CC-----
Confidence                     1224579999999999999998875   677766644433 121        122222 111  10     


Q ss_pred             eeeeeeHHHHHHHHHHHHhcC--CCCcEEecCCCc
Q 044498          231 TRSLTFIDECVEGVLRLIKSD--FREPLNIGSDEM  263 (366)
Q Consensus       231 ~~~~i~v~D~a~~~~~~l~~~--~~~~~~i~~~~~  263 (366)
                       ..+...+|+|+++..++...  .|+++.+.+|..
T Consensus       204 -~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         204 -PRLGRPEEYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             -CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             -CCCcCHHHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence             12456899999999998754  588999987754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.37  E-value=6.7e-12  Score=110.25  Aligned_cols=207  Identities=11%  Similarity=-0.001  Sum_probs=128.2

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-----ccccccceEEEccCCChhHHHhhh
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-----MEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-----~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +++++|||||+|  -||.++++.|+++|++         |++++|+.....     ........++..|+++.+++.+++
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~---------V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~   74 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT---------LAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLY   74 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCE---------EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCE---------EEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHH
Confidence            678999999987  7999999999999999         999998754211     112234578899999988766665


Q ss_pred             -------cCCCEEEEcccccCCccccccCc---chhhhhhH----HHHHHHHHHHHHcCCCceeEEEEecccccCCCCCC
Q 044498           95 -------SGVDNMSNLAADMGGMGFIQSNH---SVIMYKNT----TISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQL  160 (366)
Q Consensus        95 -------~~~d~vi~~a~~~~~~~~~~~~~---~~~~~~nv----~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~  160 (366)
                             ..+|++||+++............   ...+..+.    .....+...+.+.......++.+|+.+..+     
T Consensus        75 ~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-----  149 (274)
T d2pd4a1          75 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----  149 (274)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----
T ss_pred             HHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-----
Confidence                   36999999999764322111111   11111111    223333333333221111344455443322     


Q ss_pred             CCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-----------HHHHHHHHhCCCCeEEec
Q 044498          161 DTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-----------AAFSRKAVTSTDNFEMWG  226 (366)
Q Consensus       161 ~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-----------~~~~~~~~~~~~~~~i~~  226 (366)
                                +......|+.+|...+.+.+..+.++   |+++..+.++.+           ..+...... ..+     
T Consensus       150 ----------~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~-~~p-----  213 (274)
T d2pd4a1         150 ----------YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEI-NAP-----  213 (274)
T ss_dssp             ----------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHH-HST-----
T ss_pred             ----------ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhh-hhh-----
Confidence                      12235579999999999998887775   677776633322           111111111 111     


Q ss_pred             CCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          227 DGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       227 ~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                          ...+...+|+|.++..++...    .++++.+.+|.
T Consensus       214 ----~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         214 ----LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             ----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ----ccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence                123567999999999998652    58899998885

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.29  E-value=8.3e-12  Score=109.25  Aligned_cols=217  Identities=10%  Similarity=-0.008  Sum_probs=130.7

Q ss_pred             CCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhhh-
Q 044498           22 GKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRMT-   94 (366)
Q Consensus        22 ~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~~-   94 (366)
                      +++++|||||+|  .||.+++++|.++|++         |+..+|+..+..    .........+.+|+++.+++..++ 
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~---------Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~   75 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQ---------LVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAG   75 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCE---------EEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCE---------EEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccc
Confidence            678999999765  5999999999999999         999988765421    222334678999999986554442 


Q ss_pred             ---------cCCCEEEEcccccCCcccc-----ccCcch---hhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCC
Q 044498           95 ---------SGVDNMSNLAADMGGMGFI-----QSNHSV---IMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        95 ---------~~~d~vi~~a~~~~~~~~~-----~~~~~~---~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~  157 (366)
                               ..+|+++|+++........     ......   .+..|..........+.....+ ...|.++|...... 
T Consensus        76 ~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~~~~~~-  153 (268)
T d2h7ma1          76 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-GGSIVGMDFDPSRA-  153 (268)
T ss_dssp             HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECCCSSC-
T ss_pred             hhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc-cccccccccccccc-
Confidence                     2479999999965321111     111111   2444555555555555544322 13444444322211 


Q ss_pred             CCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCe------EE---
Q 044498          158 KQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNF------EM---  224 (366)
Q Consensus       158 ~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~------~i---  224 (366)
                                    ......|+.+|...+.+.+.++.++   ++++..+.++.+ ..+...........      ..   
T Consensus       154 --------------~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  219 (268)
T d2h7ma1         154 --------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  219 (268)
T ss_dssp             --------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             --------------CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHH
Confidence                          1124579999999999999988875   677777744433 22222222100000      00   


Q ss_pred             -e-cCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Q 044498          225 -W-GDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEM  263 (366)
Q Consensus       225 -~-~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~  263 (366)
                       . ......+.+...+|+|+++..++...    .++++.+.+|..
T Consensus       220 ~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         220 GWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             HHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence             0 00000123566899999999999542    578888888754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.19  E-value=4.4e-10  Score=99.53  Aligned_cols=209  Identities=8%  Similarity=-0.035  Sum_probs=125.4

Q ss_pred             CCCCeEEEEcCCC--chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc---------------ccc-----ccccce
Q 044498           21 SGKLRISSIGVGG--FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH---------------MME-----DMFCHE   78 (366)
Q Consensus        21 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~---------------~~~-----~~~~v~   78 (366)
                      .++|++|||||+|  -||.+++++|.++|.+         |++.+|.+...               ...     ....+.
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~---------Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---------ILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVY   76 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---------EEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEE
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---------EEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhh
Confidence            3778999999987  7999999999999999         98887643100               000     000111


Q ss_pred             EEEccC---------------------CChhHH----HhhhcCCCEEEEcccccCCc--cccccC---cchhhhhhHHHH
Q 044498           79 FHLVDL---------------------RVMDNC----LRMTSGVDNMSNLAADMGGM--GFIQSN---HSVIMYKNTTIS  128 (366)
Q Consensus        79 ~~~~D~---------------------~~~~~l----~~~~~~~d~vi~~a~~~~~~--~~~~~~---~~~~~~~nv~~~  128 (366)
                      .+..++                     .+.+.+    .+.+.++|++||+||.....  .....+   ....+++|+.+.
T Consensus        77 ~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~  156 (297)
T d1d7oa_          77 PLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSF  156 (297)
T ss_dssp             EECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHH
T ss_pred             hhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhh
Confidence            122111                     111211    12234799999999964311  122222   344578899999


Q ss_pred             HHHHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH----cCCcEEEeC
Q 044498          129 FDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD----FEIECRLVG  204 (366)
Q Consensus       129 ~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~----~~~~~~i~r  204 (366)
                      ..+.+++.....++.+.+.+++.+....              .......|..+|...+.+.+..+.+    +++++..+.
T Consensus       157 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~  222 (297)
T d1d7oa_         157 VSLLSHFLPIMNPGGASISLTYIASERI--------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS  222 (297)
T ss_dssp             HHHHHHHGGGEEEEEEEEEEECGGGTSC--------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             hhhhhHHHHHhhcCCcceeeeehhhccc--------------ccccccceecccccccccccccchhccccceEEecccc
Confidence            9999988765433224555555432211              1123456999998888777665443    478887774


Q ss_pred             CCcH-----------HHHHHHHHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCC
Q 044498          205 EKAP-----------AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDE  262 (366)
Q Consensus       205 ~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~  262 (366)
                      ++.+           ..+...... ..++         ..+...+|+|+++..++...    .++++.+.+|.
T Consensus       223 PG~i~T~~~~~~~~~~~~~~~~~~-~~Pl---------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         223 AGPLGSRAAKAIGFIDTMIEYSYN-NAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             ECCCBCCCSSCCSHHHHHHHHHHH-HSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cccccchhhhhccCCHHHHHHHHh-CCCC---------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            3322           223333332 1121         22567999999999998542    68899998874

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.19  E-value=2.3e-10  Score=99.09  Aligned_cols=213  Identities=13%  Similarity=0.039  Sum_probs=122.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh--------h
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM--------T   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~--------~   94 (366)
                      |+.||||||++.||++++++|.++|++         |++++|+..+           ...|+.+.+.....        .
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~---------V~~~~~~~~~-----------~~~d~~~~~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQ---------IVGIDIRDAE-----------VIADLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSSSS-----------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECChHH-----------HHHHhcCHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999         9999986542           23466655433322        1


Q ss_pred             cCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHH----HcCCCceeEEEEecccccC-CCCCCCCCccc---
Q 044498           95 SGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAAR----MNGVMSLTFFFVSSACIYP-EFKQLDTDVKE---  166 (366)
Q Consensus        95 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~r~I~~SS~~vyg-~~~~~~~~~~e---  166 (366)
                      ..+|+++++|+...    ..........+|..+...+.+...    .....  ..+.+++..... .....+.....   
T Consensus        61 ~~id~lv~~Ag~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g  134 (257)
T d1fjha_          61 KGMDGLVLCAGLGP----QTKVLGNVVSVNYFGATELMDAFLPALKKGHQP--AAVVISSVASAHLAFDKNPLALALEAG  134 (257)
T ss_dssp             TCCSEEEECCCCCT----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC--EEEEECCGGGGSSCGGGCTTHHHHHHT
T ss_pred             CCCcEEEEcCCCCC----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccC--cceeeeeccccchhhhhhhhhhhccCC
Confidence            35899999998643    122334445667776666555443    33443  455555432211 11111100000   


Q ss_pred             ---------ccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-HHHHHHHHhCCCCeE-EecCCccee
Q 044498          167 ---------SEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-AAFSRKAVTSTDNFE-MWGDGKQTR  232 (366)
Q Consensus       167 ---------~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-~~~~~~~~~~~~~~~-i~~~~~~~~  232 (366)
                               .......+...|+.+|...+.+.+.++.++   |+++..+.++.+ ..+............ +........
T Consensus       135 ~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Plg  214 (257)
T d1fjha_         135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG  214 (257)
T ss_dssp             CHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT
T ss_pred             cEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCC
Confidence                     000011123469999999999999987665   788887765544 334333332111111 111111223


Q ss_pred             eeeeHHHHHHHHHHHHhcC----CCCcEEecCC
Q 044498          233 SLTFIDECVEGVLRLIKSD----FREPLNIGSD  261 (366)
Q Consensus       233 ~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~  261 (366)
                      -+...+|+|+++..|+...    .|+++.+.+|
T Consensus       215 R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            3667999999999998542    5888999877

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.18  E-value=6e-10  Score=96.91  Aligned_cols=207  Identities=14%  Similarity=0.121  Sum_probs=124.1

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCCh----hHHHh
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVM----DNCLR   92 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~----~~l~~   92 (366)
                      ..|||||++.||.++++.|+++|++         |++.+|+..+....        ....+..+..|+.+.    +.+.+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~---------Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFR---------VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCED   73 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE---------EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCE---------EEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHH
Confidence            5799999999999999999999999         99999886542111        112234555555432    22322


Q ss_pred             h-------hcCCCEEEEcccccCCccccccC--------------cchhhhhhHHHHHHHHHHHHHcC-------CCcee
Q 044498           93 M-------TSGVDNMSNLAADMGGMGFIQSN--------------HSVIMYKNTTISFDMLEAARMNG-------VMSLT  144 (366)
Q Consensus        93 ~-------~~~~d~vi~~a~~~~~~~~~~~~--------------~~~~~~~nv~~~~~ll~a~~~~~-------~~~~r  144 (366)
                      +       +.++|++||+||...........              ....+..|+.............-       .....
T Consensus        74 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (266)
T d1mxha_          74 IIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS  153 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEE
T ss_pred             HHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccccccccc
Confidence            2       23799999999976432111110              11223344444444444433321       11014


Q ss_pred             EEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHc---CCcEEEeCCCcH-------HHHHHH
Q 044498          145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAP-------AAFSRK  214 (366)
Q Consensus       145 ~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~~---~~~~~i~r~~~~-------~~~~~~  214 (366)
                      ++.+|+.....               +......|+.+|...+.+.+.++.++   |+++..+.|+.+       ..+...
T Consensus       154 ~~~~~~~~~~~---------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~  218 (266)
T d1mxha_         154 VVNLCDAMTDL---------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEE  218 (266)
T ss_dssp             EEEECCGGGGS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHH
T ss_pred             chhhhhccccc---------------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHH
Confidence            55555543221               22235679999999999999988875   677766633322       233333


Q ss_pred             HHhCCCCeEEecCCcceeeeeeHHHHHHHHHHHHhcC----CCCcEEecCCCcc
Q 044498          215 AVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD----FREPLNIGSDEMV  264 (366)
Q Consensus       215 ~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~----~~~~~~i~~~~~~  264 (366)
                      +.. ..++   +     +-+...+|+|+++..++...    .|+++.+.+|..+
T Consensus       219 ~~~-~~pl---~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         219 YRR-KVPL---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHT-TCTT---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHh-cCCC---C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            333 2211   1     12356999999999999652    6889999887644

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.08  E-value=1.7e-09  Score=97.05  Aligned_cols=161  Identities=9%  Similarity=-0.017  Sum_probs=101.3

Q ss_pred             CCeEEEEc--CCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc---------------ccc---ccccceEEE-
Q 044498           23 KLRISSIG--VGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH---------------MME---DMFCHEFHL-   81 (366)
Q Consensus        23 ~~~vlItG--atG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~---------------~~~---~~~~v~~~~-   81 (366)
                      .+.+||||  ++.-||.++++.|.++|.+         |++.++.....               ...   ......... 
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~---------V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVK---------IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPF   72 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE---------EEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEEC
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCE---------EEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccc
Confidence            46799999  5569999999999999999         88876543210               000   000011222 


Q ss_pred             -------------------ccCCChhHHHhh-------hcCCCEEEEcccccCCc--cccc---cCcchhhhhhHHHHHH
Q 044498           82 -------------------VDLRVMDNCLRM-------TSGVDNMSNLAADMGGM--GFIQ---SNHSVIMYKNTTISFD  130 (366)
Q Consensus        82 -------------------~D~~~~~~l~~~-------~~~~d~vi~~a~~~~~~--~~~~---~~~~~~~~~nv~~~~~  130 (366)
                                         +|+.+.+.++++       +.++|++||+||.....  ....   .+....+++|+.+...
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~  152 (329)
T d1uh5a_          73 DASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLIS  152 (329)
T ss_dssp             CTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHH
Confidence                               244444333333       34799999999965421  1122   2234457889988888


Q ss_pred             HHHHHHHcCCCceeEEEEecccccCCCCCCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHH----cCCcEEEeCCC
Q 044498          131 MLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKD----FEIECRLVGEK  206 (366)
Q Consensus       131 ll~a~~~~~~~~~r~I~~SS~~vyg~~~~~~~~~~e~~~~~~~p~~~Y~~sK~~~E~~l~~~~~~----~~~~~~i~r~~  206 (366)
                      +.+++.+.=.++.++|.+||.......              +.+...|+.+|...+.+.+.++.+    +|+++..+.|+
T Consensus       153 ~~k~~~~~m~~~GsIv~iss~~~~~~~--------------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG  218 (329)
T d1uh5a_         153 LCKYFVNIMKPQSSIISLTYHASQKVV--------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG  218 (329)
T ss_dssp             HHHHHGGGEEEEEEEEEEECGGGTSCC--------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHhhcccccccccceeehhcccc--------------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecC
Confidence            888887652222379998885432211              122456999999999999887765    47888777443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.95  E-value=3.8e-10  Score=93.29  Aligned_cols=76  Identities=9%  Similarity=-0.017  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-----ccccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-----DMFCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-----~~~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ++++|+||||+|.||+.+++.|.++|.+         |++++|+..+....     ....+.+..+|+++.+++.+++.+
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   92 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAE---------VVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG   92 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccc---------hhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcC
Confidence            7899999999999999999999999999         99999986542211     223457889999999999999999


Q ss_pred             CCEEEEcccc
Q 044498           97 VDNMSNLAAD  106 (366)
Q Consensus        97 ~d~vi~~a~~  106 (366)
                      +|+|||+||.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            9999999985

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.52  E-value=2.4e-07  Score=71.15  Aligned_cols=94  Identities=15%  Similarity=0.077  Sum_probs=70.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhh-hcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRM-TSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~-~~~~d~vi  101 (366)
                      |+|+|+|+ |.+|+.+++.|.+.|++         |++++.++....... ..++.++.+|.++++.+.++ +++++.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~---------v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv   70 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHD---------IVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYI   70 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCC---------cceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhc
Confidence            79999997 99999999999999999         999998876433221 23568999999999999887 57899998


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      -+...          .    +.|+.    +...++..+.+  ++|-
T Consensus        71 ~~t~~----------d----~~N~~----~~~~~k~~~~~--~iI~   96 (132)
T d1lssa_          71 AVTGK----------E----EVNLM----SSLLAKSYGIN--KTIA   96 (132)
T ss_dssp             ECCSC----------H----HHHHH----HHHHHHHTTCC--CEEE
T ss_pred             ccCCc----------H----HHHHH----HHHHHHHcCCc--eEEE
Confidence            65441          1    23433    33456677877  7763

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.42  E-value=1e-06  Score=68.30  Aligned_cols=112  Identities=13%  Similarity=0.043  Sum_probs=77.3

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           25 RISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ||.|+||+|.+|++++..|..+|.  +         +..++..+.+....  .......-........+..+.++++|+|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~e---------lvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSR---------LTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSE---------EEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccce---------EEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEE
Confidence            799999999999999999988874  4         78888654332111  1110011111122244555667899999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      |.+||...   ....+....+..|+...+.+++.+.+++.+  -+|.+-|
T Consensus        73 Vitag~~~---~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~--~iiivvt  117 (144)
T d1mlda1          73 VIPAGVPR---KPGMTRDDLFNTNATIVATLTAACAQHCPD--AMICIIS  117 (144)
T ss_dssp             EECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT--SEEEECS
T ss_pred             EECCCcCC---CCCCCcchHHHHHHHHHHHHHHHHHhcCCC--eEEEEec
Confidence            99999542   334567888999999999999999999876  4554444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.37  E-value=1e-06  Score=68.31  Aligned_cols=104  Identities=13%  Similarity=0.084  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |+||.|+||||++|+.+++.|++. .+.      ...++.+.++...........-.....+..+.+    .++++|++|
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p------~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~----~~~~~DivF   70 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFD------AIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE----ALKALDIIV   70 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGG------GSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH----HHHTCSEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCC------eeEEEEeeccccccccccccCCceeeecccchh----hhhcCcEEE
Confidence            679999999999999999988875 332      111565554433221111111122222333332    257899999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCCC
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFK  158 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~~  158 (366)
                      .+++                   -.....+...+.+.+.+   .+.++..+.|-..+
T Consensus        71 ~a~~-------------------~~~s~~~~~~~~~~g~~---~~VID~Ss~fR~~~  105 (146)
T d1t4ba1          71 TCQG-------------------GDYTNEIYPKLRESGWQ---GYWIDAASSLRMKD  105 (146)
T ss_dssp             ECSC-------------------HHHHHHHHHHHHHTTCC---CEEEECSSTTTTCT
T ss_pred             EecC-------------------chHHHHhhHHHHhcCCC---eecccCCcccccCC
Confidence            8887                   34455667777777764   34444444444333

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.30  E-value=3e-06  Score=65.79  Aligned_cols=109  Identities=13%  Similarity=0.066  Sum_probs=72.4

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccc---------ccccccceEEEccCCChh
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHM---------MEDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~---------~~~~~~v~~~~~D~~~~~   88 (366)
                      |.+.|||.|+|+ |++|+.++..|+.+|  .+         |..+++......         ...........+|+   +
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~e---------lvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~   68 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEE---------FVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S   68 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcE---------EEEeecccchhHHHHHHHhccccccCCceEeeccH---H
Confidence            345689999995 999999999999987  47         999998754211         01111223444443   2


Q ss_pred             HHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                          .++++|+||.+||...   ....+....+..|+.....+.+...+++.+  -++.+-|
T Consensus        69 ----~~~~adivvitag~~~---~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~--aivivvt  121 (146)
T d1ez4a1          69 ----DCKDADLVVITAGAPQ---KPGESRLDLVNKNLNILSSIVKPVVDSGFD--GIFLVAA  121 (146)
T ss_dssp             ----GGTTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHTTCC--SEEEECS
T ss_pred             ----HhccccEEEEeccccc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCC--cEEEEeC
Confidence                3578999999998543   334456777889999999999999999877  4554444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.26  E-value=3.9e-06  Score=64.99  Aligned_cols=107  Identities=11%  Similarity=0.007  Sum_probs=73.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccc-c-----c------ccccceEEEccCCChhH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHM-M-----E------DMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~-~-----~------~~~~v~~~~~D~~~~~~   89 (366)
                      |||.|+||+|.+|+.++..|..+|.  +         +..+++.+.... .     .      ....+......-.+.  
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~e---------l~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~--   69 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKD---------LVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL--   69 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCE---------EEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG--
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccc---------cccccchhhhHhhhcccccchhcccccccCCccccCCcchH--
Confidence            6899999999999999999998883  6         888887643210 0     0      011112221111122  


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                        +.++++|+||-+||...   ....+..+.+..|....+.+.+...+++.+  .++.+
T Consensus        70 --~~l~~aDvVVitAG~~~---~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~--~iivV  121 (145)
T d1hyea1          70 --RIIDESDVVIITSGVPR---KEGMSRMDLAKTNAKIVGKYAKKIAEICDT--KIFVI  121 (145)
T ss_dssp             --GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEC
T ss_pred             --HHhccceEEEEeccccc---CCCCChhhhhhhhHHHHHHHHHHHhccCCC--eEEEE
Confidence              34679999999999542   334466778999999999999999998765  55433

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=1.1e-05  Score=62.41  Aligned_cols=112  Identities=13%  Similarity=0.051  Sum_probs=72.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-C--CCCCCCCCccEEEEEeCCCcccc---ccccccceEEEccCCChhHHHhhhcCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-R--HYSTSIPNALYIIASDWNKNEHM---MEDMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g--~~~~~~~~~~~V~~~~r~~~~~~---~~~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      |||.|+|++|.+|++++..|..+ +  .+         +..++..+....   ...+........-+...... +.+++.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~e---------l~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~a   70 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSE---------LSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGA   70 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCE---------EEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcE---------EEEecccccchhHHHHHHCCccccCCcEEEcCCCc-cccCCC
Confidence            68999999999999999887643 4  56         888886542110   01111001111111111222 246799


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      |+||.+||...   ....+..+.+..|....+.+.+.+.+++.+. .+|.+|
T Consensus        71 DvvvitaG~~~---k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~a-ivivvt  118 (145)
T d2cmda1          71 DVVLISAGVRR---KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKA-CIGIIT  118 (145)
T ss_dssp             SEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTS-EEEECS
T ss_pred             CEEEECCCccC---CCCcchhhHHHHHHHHHHHHHHHHHhhCCCc-EEEEcc
Confidence            99999999643   3345777889999999999999999998661 244444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.10  E-value=9.8e-06  Score=61.83  Aligned_cols=72  Identities=14%  Similarity=0.203  Sum_probs=59.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi~  102 (366)
                      ++++|+|+ |.+|+++++.|.+.|++         |++++.++.........+...+.+|.++++.+.++ +.++|.+|-
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~---------vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~   70 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHE---------VLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIV   70 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCC---------CEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCe---------EEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEE
Confidence            46889986 99999999999999999         99999887665544555668899999999998887 678998885


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +.+
T Consensus        71 ~~~   73 (134)
T d2hmva1          71 AIG   73 (134)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            544

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.10  E-value=1.1e-05  Score=62.32  Aligned_cols=98  Identities=16%  Similarity=0.074  Sum_probs=56.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |+|+|.|+||||++|+.|++.|.+++|....      +..+..............-+....++..     ..+.++|+++
T Consensus         1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~------l~~~~s~~~~Gk~i~~~~~~~~~~~~~~-----~~~~~~d~vf   69 (144)
T d2hjsa1           1 QPLNVAVVGATGSVGEALVGLLDERDFPLHR------LHLLASAESAGQRMGFAESSLRVGDVDS-----FDFSSVGLAF   69 (144)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSC------EEEEECTTTTTCEEEETTEEEECEEGGG-----CCGGGCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCceE------EEEEeecccCCcceeeccccchhccchh-----hhhccceEEE
Confidence            4689999999999999999988766654111      5555433222111110000111111111     1246799999


Q ss_pred             EcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          102 NLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       102 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      .+++                   -.....+...+.+.++   ++|=.||..
T Consensus        70 ~a~p-------------------~~~s~~~~~~~~~~g~---~VID~Ss~f   98 (144)
T d2hjsa1          70 FAAA-------------------AEVSRAHAERARAAGC---SVIDLSGAL   98 (144)
T ss_dssp             ECSC-------------------HHHHHHHHHHHHHTTC---EEEETTCTT
T ss_pred             ecCC-------------------cchhhhhccccccCCc---eEEeechhh
Confidence            8776                   2334556666667776   588777753

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.10  E-value=1.6e-06  Score=68.24  Aligned_cols=121  Identities=11%  Similarity=0.010  Sum_probs=71.5

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc---------ccccceEEEccCCChhHH
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME---------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~---------~~~~v~~~~~D~~~~~~l   90 (366)
                      |+..|||.|+||+|++|++++..|...+.-  .....+....+.-........         .......+...    ...
T Consensus         1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~   74 (154)
T d1y7ta1           1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEML--GKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDP   74 (154)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTT--CTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhcccc--ccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cch
Confidence            345679999999999999999999876531  000111122222211110000         00011122221    223


Q ss_pred             HhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           91 LRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      ...++++|+||-++|...   ....+..+.+..|+...+.+.....++..++..++.+|
T Consensus        75 ~~~~~~advViitaG~~~---~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          75 KVAFKDADYALLVGAAPR---KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             HHHTTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhcccccEEEeecCcCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            456789999999999643   34456778899999999999999998643212344444

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.08  E-value=7e-06  Score=64.26  Aligned_cols=116  Identities=13%  Similarity=0.024  Sum_probs=77.9

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----cc----ccce-EEEccCCChh
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----DM----FCHE-FHLVDLRVMD   88 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----~~----~~v~-~~~~D~~~~~   88 (366)
                      ||.+++||.|+|+ |.+|+.++..|..++. +         +.+++.++......    .+    .+.. .+.+    ..
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~e---------l~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~----~~   68 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELAD---------VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA----EY   68 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCE---------EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE----EC
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCce---------EEEEEeccccchhHHHHHhhhccccCCeeEEec----cC
Confidence            5667889999997 9999999988888774 6         88888766432111    00    0001 1111    12


Q ss_pred             HHHhhhcCCCEEEEcccccCCccc--cccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGF--IQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ..+..++++|+||-++|....+..  ...+....+..|......+++.+.+++.+  -++.+-|
T Consensus        69 ~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~--aiviivs  130 (154)
T d1pzga1          69 SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK--TFIIVVT  130 (154)
T ss_dssp             SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTT--CEEEECC
T ss_pred             chhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCC--cEEEEeC
Confidence            234457899999999986543221  12356777889999999999999999877  4554444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.95  E-value=9.9e-06  Score=64.71  Aligned_cols=119  Identities=12%  Similarity=-0.004  Sum_probs=74.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-c-----ccc---ccceEEEccCCChhHHHh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-M-----EDM---FCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~-----~~~---~~v~~~~~D~~~~~~l~~   92 (366)
                      +..||.||||+|.||++++..|...+.  +..+.++-+..++....... .     ...   .....+..    .....+
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v--~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~   96 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEV--FGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYE   96 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTT--TCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcc--cCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchh
Confidence            446899999999999999998887431  11112222555554443211 0     000   00111111    122445


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                      .++++|+||-.+|..   +....+..+.+..|....+.+.+++.++..++.+++.+|
T Consensus        97 ~~~~aDvVvi~ag~~---rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          97 VFEDVDWALLIGAKP---RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             HTTTCSEEEECCCCC---CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hccCCceEEEeeccC---CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            678999999999864   345567788899999999999999999754323555554

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.92  E-value=3.2e-05  Score=59.58  Aligned_cols=98  Identities=13%  Similarity=0.060  Sum_probs=54.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |||.|+||||++|+.|++.|++. .|..      ..+..++.+..........+-.....+..+.    ..++++|+||.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~------~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~----~~~~~~DvvF~   70 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDL------IEPVFFSTSQIGVPAPNFGKDAGMLHDAFDI----ESLKQLDAVIT   70 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGG------SEEEEEESSCCSSBCCCSSSCCCBCEETTCH----HHHTTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCc------eEEEEeccccccccccccCCcceeeecccch----hhhccccEEEE
Confidence            68999999999999999988864 3330      1155444332211111000001111122222    23578999998


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      +.+.                   .-+..+...+.+.+.+ ..+|=.|+.
T Consensus        71 alp~-------------------~~s~~~~~~l~~~g~~-~~VIDlSsd   99 (147)
T d1mb4a1          71 CQGG-------------------SYTEKVYPALRQAGWK-GYWIDAAST   99 (147)
T ss_dssp             CSCH-------------------HHHHHHHHHHHHTTCC-SEEEESSST
T ss_pred             ecCc-------------------hHHHHHhHHHHHcCCc-eEEEeCCcc
Confidence            8872                   3345677777777764 125555654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.84  E-value=6.6e-05  Score=57.52  Aligned_cols=98  Identities=12%  Similarity=0.010  Sum_probs=69.5

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccc------cc-----ccccceEEEccCCChhHHH
Q 044498           25 RISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHM------ME-----DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~------~~-----~~~~v~~~~~D~~~~~~l~   91 (366)
                      ||.|+||+|.+|+.++..|..++.  +         +..++.......      ..     ......+..+|   ++   
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~e---------l~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~---   66 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADE---------VVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE---   66 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSE---------EEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG---
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCE---------EEEEecCCcccccceeecchhhcccccCCceEeeCC---HH---
Confidence            799999999999999999999874  4         777775322110      00     11122333333   22   


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                       .++++|+||-+||...   ....+..+.+..|....+.+.+...+++.+
T Consensus        67 -~~~~aDiVvitaG~~~---~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~  112 (142)
T d1o6za1          67 -DTAGSDVVVITAGIPR---QPGQTRIDLAGDNAPIMEDIQSSLDEHNDD  112 (142)
T ss_dssp             -GGTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred             -HhhhcCEEEEeccccc---ccCCchhhHHHHHHHHHHHHHHHHHhcCCC
Confidence             2579999999999543   334567788999999999999999999866

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=1.4e-05  Score=63.19  Aligned_cols=68  Identities=9%  Similarity=-0.020  Sum_probs=45.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccccc--ce--EEEccCCChhHHHhhhcCCCE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFC--HE--FHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~--v~--~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      |||+|+|+ |.+|+.++..|.+.|++         |..++|............  ..  .......+.    ..+..+|+
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~   66 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHE---------VQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDL   66 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCc---------eEEEEcCHHHhhhhccccCCccccccccccchh----hhhcccce
Confidence            79999997 99999999999999999         999999876433221110  01  111111122    23457999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ||.+.-
T Consensus        67 iii~vk   72 (167)
T d1ks9a2          67 LLVTLK   72 (167)
T ss_dssp             EEECSC
T ss_pred             EEEeec
Confidence            997766

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.83  E-value=6.5e-05  Score=58.39  Aligned_cols=42  Identities=21%  Similarity=0.082  Sum_probs=36.9

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH   69 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~   69 (366)
                      +..+|+||.|+||.|.+|+.+++.|.+.||+         |.++++.....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~---------V~~~d~~~~~~   46 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYP---------ISILDREDWAV   46 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCC---------EEEECTTCGGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCC---------cEecccccccc
Confidence            3447789999999999999999999999999         99999876543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.82  E-value=1.5e-05  Score=62.32  Aligned_cols=111  Identities=10%  Similarity=-0.041  Sum_probs=67.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc------cc-ccceEEEccCCChhHHHhhhc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME------DM-FCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~------~~-~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      .|||.|+||+|.+|++++..|...+.  +..+.++.+..++.........      .. ...........  ....+.++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~--~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~   78 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSV--FGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT--DKEEIAFK   78 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTT--TCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE--SCHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHh--cCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC--cccccccC
Confidence            46999999999999999999886542  1111222255555443321100      00 00011111111  12335578


Q ss_pred             CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCC
Q 044498           96 GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGV  140 (366)
Q Consensus        96 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~  140 (366)
                      ++|+||-++|...   ....+..+.+..|....+.+.+...++..
T Consensus        79 ~~dvVVitag~~~---~~g~sr~dll~~N~~i~k~~~~~i~k~a~  120 (154)
T d5mdha1          79 DLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYAK  120 (154)
T ss_dssp             TCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHSC
T ss_pred             CceEEEEecccCC---CCCCchhHHHHHhHHHHHHHHHHHHhhCC
Confidence            9999999999643   33456677899999999999999877643

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.82  E-value=8e-05  Score=57.61  Aligned_cols=106  Identities=18%  Similarity=0.120  Sum_probs=74.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----------cccccceEEEccCCChhH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----------EDMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----------~~~~~v~~~~~D~~~~~~   89 (366)
                      ...||.|+|| |++|++++..|..+|.  +         +..+++.+.....          .....+.+...|   .  
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~e---------l~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~--   69 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADE---------IVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---Y--   69 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---G--
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCce---------EEEEeeccccccchhccHhhCccccCCCeEEEECC---H--
Confidence            4568999997 9999999999999874  5         8888876543110          011122333333   2  


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEE
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFV  148 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~  148 (366)
                        +.++++|+||.++|...   .......+.+..|......+.+.+.+++.+ ..+|.+
T Consensus        70 --~~l~daDvvvitag~~~---~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~~ivv  122 (148)
T d1ldna1          70 --DDCRDADLVVICAGANQ---KPGETRLDLVDKNIAIFRSIVESVMASGFQ-GLFLVA  122 (148)
T ss_dssp             --GGTTTCSEEEECCSCCC---CTTTCSGGGHHHHHHHHHHHHHHHHHHTCC-SEEEEC
T ss_pred             --HHhccceeEEEeccccc---ccCcchhHHHHHHHHHHHHHHHHHHhhCCC-ceEEEe
Confidence              23678999999999543   334566788899999999999999998866 134443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.80  E-value=4.3e-05  Score=60.90  Aligned_cols=73  Identities=10%  Similarity=-0.015  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      .++|+|+|| |++|+++++.|.++|++         |++++|+..+....  ..........+..+.......+...|.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~---------V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   71 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIK---------VTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLV   71 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCE---------EEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCE---------EEEEECChHHHHHHHhcccccccccccccchhhhHhhhhcccee
Confidence            478999997 99999999999999999         99999987754332  1122234445666667777778888988


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      +.+..
T Consensus        72 i~~~~   76 (182)
T d1e5qa1          72 ISLIP   76 (182)
T ss_dssp             EECSC
T ss_pred             Eeecc
Confidence            86654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.77  E-value=7.9e-05  Score=57.06  Aligned_cols=105  Identities=13%  Similarity=0.060  Sum_probs=72.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc---------ccccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME---------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~---------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      |||.|+|+ |.+|+.++..|+.++.  +         +..++..+......         ..........|   .+    
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~e---------l~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~----   63 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFARE---------MVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YA----   63 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GG----
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCE---------EEEEecccccccchhccccccccccccccccCCc---HH----
Confidence            68999996 9999999999988873  5         88888765421110         01112222222   22    


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      .++++|+||-+||...   .......+.+..|....+.+.+...+++.+  -++.+-|
T Consensus        64 ~~~~adivvitag~~~---~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~--aivivvt  116 (140)
T d1a5za1          64 DLKGSDVVIVAAGVPQ---KPGETRLQLLGRNARVMKEIARNVSKYAPD--SIVIVVT  116 (140)
T ss_dssp             GGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHHHCTT--CEEEECS
T ss_pred             HhcCCCEEEEeccccc---CCCcchhhhhccccchHHHHHHHHHhcCCC--cEEEEeC
Confidence            3678999999999643   333456677889999999999999998876  4454433

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.73  E-value=0.00012  Score=56.24  Aligned_cols=99  Identities=15%  Similarity=0.085  Sum_probs=70.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCcccccc----------ccccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKNEHMME----------DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~~~~~~----------~~~~v~~~~~D~~~~~~l~   91 (366)
                      |||.|+|| |.+|+.++..|...|  .+         +..++..+......          ......+...  .+.    
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~e---------l~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----   64 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARE---------LVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCce---------EEEeccccccchhhhhhhhcccchhcccceEEec--CCH----
Confidence            68999996 999999999999887  46         99999776532111          0111122211  222    


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +.++++|+||-+||...   ....+....+..|....+.+.+.+.+++.+
T Consensus        65 ~~~~dadvvvitag~~~---~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~  111 (142)
T d1guza1          65 ADTANSDIVIITAGLPR---KPGMTREDLLMKNAGIVKEVTDNIMKHSKN  111 (142)
T ss_dssp             GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             HHhcCCeEEEEEEecCC---CCCCchHHHHHHHHHHHHHHHHHhhccCCC
Confidence            23678999999999643   233456777899999999999999998865

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.68  E-value=0.00016  Score=55.31  Aligned_cols=98  Identities=13%  Similarity=0.029  Sum_probs=65.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----cc-----ccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----DM-----FCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----~~-----~~v~~~~~D~~~~~~l~~   92 (366)
                      .||.|+|+ |.+|+.++..|+.++.  +         +..+++........    .+     .......+   ++    .
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~e---------l~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~   64 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANE---------LVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----S   64 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSE---------EEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----H
Confidence            47999997 9999999999999874  5         88998776532111    00     01111111   22    2


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      .++++|+||-+||...   ....+....+..|+.....+.+.+.+++.+
T Consensus        65 ~~~~adivvitag~~~---~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~  110 (142)
T d1y6ja1          65 DVKDCDVIVVTAGANR---KPGETRLDLAKKNVMIAKEVTQNIMKYYNH  110 (142)
T ss_dssp             GGTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             HhCCCceEEEeccccc---CcCcchhHHhhHHHHHHHHHHHHhhccCCC
Confidence            4678999999998543   334566778999999999999999998866

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.67  E-value=1.2e-05  Score=64.89  Aligned_cols=103  Identities=10%  Similarity=0.147  Sum_probs=67.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh---hHHHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM---DNCLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~---~~l~~~~--~~   96 (366)
                      ++.+|||+||+|-+|+..++-....|.+         |+++++++++.......+...+ .|..+.   +.+.+..  .+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~---------vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~~~~G   98 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCK---------VVGAAGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDG   98 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCSEE-EETTSCSCHHHHHHHHCTTC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCE---------EEEeCCCHHHHHHHHhhhhhhh-cccccccHHHHHHHHhhcCC
Confidence            5678999999999999999988889999         9999987665433333344443 233333   3333333  36


Q ss_pred             CCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccCCC
Q 044498           97 VDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEF  157 (366)
Q Consensus        97 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg~~  157 (366)
                      +|+|+++.|.                   ......++.++..+    +++.++....|+..
T Consensus        99 vd~v~D~vG~-------------------~~~~~~~~~l~~~G----~~v~~G~~~~~~~~  136 (182)
T d1v3va2          99 YDCYFDNVGG-------------------EFLNTVLSQMKDFG----KIAICGAISVYNRM  136 (182)
T ss_dssp             EEEEEESSCH-------------------HHHHHHGGGEEEEE----EEEECCCGGGTTCT
T ss_pred             CceeEEecCc-------------------hhhhhhhhhccCCC----eEEeecceeecccc
Confidence            9999999882                   22234444444444    67877666555443

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.66  E-value=2.7e-05  Score=62.48  Aligned_cols=27  Identities=11%  Similarity=0.261  Sum_probs=23.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc-CCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE-RHY   49 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~-g~~   49 (366)
                      |+||.|+|||||+|+.|++.|.+. ..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~e   28 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMT   28 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCc
Confidence            789999999999999999988875 445

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.64  E-value=6e-05  Score=59.50  Aligned_cols=65  Identities=15%  Similarity=0.200  Sum_probs=44.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccc-eEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCH-EFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v-~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |||.|+|. |.+|+.+++.|.+.|++         |++++|++.........++ ....   ++    .+.++++|+||-
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~---------V~~~d~~~~~~~~a~~~~~~~~~~---~~----~~~~~~~DiIil   63 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHY---------LIGVSRQQSTCEKAVERQLVDEAG---QD----LSLLQTAKIIFL   63 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTSCSEEE---SC----GGGGTTCSEEEE
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCE---------EEEEECCchHHHHHHHhhccceee---ee----cccccccccccc
Confidence            68999985 99999999999999999         9999988653222222111 1111   11    134678999985


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        64 avp   66 (165)
T d2f1ka2          64 CTP   66 (165)
T ss_dssp             CSC
T ss_pred             cCc
Confidence            543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=0.00015  Score=52.87  Aligned_cols=69  Identities=17%  Similarity=0.195  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc--CCC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS--GVD   98 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~--~~d   98 (366)
                      ....||.|+| +|.+|+-++....+.|++         |++++..++.......  -.++.+|+.|.+.+.++..  ++|
T Consensus         9 ~~~~kigIlG-gGQL~rMla~aA~~lG~~---------v~v~d~~~~~PA~~va--~~~i~~~~~d~~~l~~~~~~~~~D   76 (111)
T d1kjqa2           9 PAATRVMLLG-SGELGKEVAIECQRLGVE---------VIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPH   76 (111)
T ss_dssp             TTCCEEEEES-CSHHHHHHHHHHHTTTCE---------EEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCCCEEEEEe-CCHHHHHHHHHHHHCCCE---------EEEEcCCCCCchhhcC--CeEEECCCCCHHHHHHHHHhhCCc
Confidence            3556899999 599999999999999999         9999987664433322  2788999999999988764  689


Q ss_pred             EEE
Q 044498           99 NMS  101 (366)
Q Consensus        99 ~vi  101 (366)
                      +|-
T Consensus        77 viT   79 (111)
T d1kjqa2          77 YIV   79 (111)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            886

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.58  E-value=0.00019  Score=54.91  Aligned_cols=106  Identities=13%  Similarity=-0.020  Sum_probs=72.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----cc------cccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----ED------MFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~------~~~v~~~~~D~~~~~~l~   91 (366)
                      |||.|+|+ |.+|++++..|..+|.  +         +..++..+.....    ..      .....+..  -.|.+   
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~e---------lvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~--~~d~~---   65 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDE---------IALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG--GADYS---   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSE---------EEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE--ESCGG---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCce---------EEEEecccchhhHHHHHHhhhccccCCCCcccc--CCCHH---
Confidence            68999996 9999999999998873  5         8888876543211    00      00011111  11222   


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                       .++++|+||-.||...   ....+..+.+..|......+.+...+++.+  .++.+-|
T Consensus        66 -~~~~adiVvitag~~~---~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~--aivivvt  118 (142)
T d1ojua1          66 -LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE--SKILVVT  118 (142)
T ss_dssp             -GGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTT--CEEEECS
T ss_pred             -HhccccEEEEeccccC---CCCCchHHHHHHhhHHHHHHHHHHHhhCCC--cEEEEec
Confidence             4678999999988543   334466778899999999999999998866  4554444

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.57  E-value=0.0003  Score=54.01  Aligned_cols=107  Identities=10%  Similarity=0.033  Sum_probs=68.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCcccccc----------ccccceEEEccCCChhHHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMME----------DMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~~----------~~~~v~~~~~D~~~~~~l~   91 (366)
                      +||.|+|+ |++|+.++..|+.+|.  +         +..++..+......          ..........   +++   
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~e---------lvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~---   65 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADD---------YVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWA---   65 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSE---------EEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGG---
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCce---------EEEEecccchhhhHHHhhhccccccCCccceecc---CHH---
Confidence            68999995 9999999999998873  5         88888765431100          1111122222   222   


Q ss_pred             hhhcCCCEEEEcccccCCcc-ccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEe
Q 044498           92 RMTSGVDNMSNLAADMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVS  149 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~S  149 (366)
                       .++++|+||-+||...... ....+....+..|....+.+.+...+++.+  -++.+-
T Consensus        66 -~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~--aivivv  121 (146)
T d1hyha1          66 -ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH--GVLVVI  121 (146)
T ss_dssp             -GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCC--SEEEEC
T ss_pred             -HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEe
Confidence             3578999999998542110 111234556888999999999999999866  444433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.54  E-value=0.00066  Score=52.81  Aligned_cols=102  Identities=9%  Similarity=-0.045  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----ccc----ccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----EDM----FCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~~----~~v~~~~~D~~~~~~l~   91 (366)
                      +..||.|+|+ |.+|+.++..|..+|.  +         +..++..+.....    ..+    .+...+. --.+++   
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~E---------lvLiD~~~~~a~g~alDl~h~~~~~~~~~~~-~~~d~~---   84 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADE---------LALVDVLEDKLKGEMMDLQHGSLFLQTPKIV-ADKDYS---   84 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSCHHHHHHHHHHHHHTGGGCCCSEEE-ECSSGG---
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcE---------EEEEEeccchhHHHHHHHhccccccCCCeEE-eccchh---
Confidence            3468999996 9999999999999985  5         8888876543210    000    0111111 112222   


Q ss_pred             hhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                       .++++|+||..||...   ....+....+..|....+.+.....+.+.+
T Consensus        85 -~~~~adiVVitAg~~~---~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~  130 (160)
T d1i0za1          85 -VTANSKIVVVTAGVRQ---QEGESRLNLVQRNVNVFKFIIPQIVKYSPD  130 (160)
T ss_dssp             -GGTTCSEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             -hcccccEEEEecCCcc---ccCcchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence             3678999999999653   334566778899999999999999998866

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=3.9e-05  Score=61.18  Aligned_cols=74  Identities=9%  Similarity=0.042  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh---h--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM---T--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~---~--~~   96 (366)
                      .+.+|||+||+|-+|...++.+...|.+         |+++++++.+.......+...+ .|..+.+..+++   .  ++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~---------vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLK---------ILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE---------EEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTC
T ss_pred             CCCEEEEEeccccccccccccccccCcc---------cccccccccccccccccCcccc-cccccccHHHHhhhhhccCC
Confidence            4678999999999999999988889999         9999876554333333344433 355555433333   2  25


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||.+.+
T Consensus        98 ~d~v~d~~g  106 (174)
T d1yb5a2          98 IDIIIEMLA  106 (174)
T ss_dssp             EEEEEESCH
T ss_pred             ceEEeeccc
Confidence            899999887

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.49  E-value=0.00013  Score=54.70  Aligned_cols=72  Identities=10%  Similarity=0.185  Sum_probs=52.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEE-EeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA-SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~-~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |||.|.|++|-.|+.+++.+.++|++         +.+ ++...                        ...+.++|+||.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~---------l~~~id~~~------------------------~~~~~~~DVvID   47 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHE---------LVLKVDVNG------------------------VEELDSPDVVID   47 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEEEETTE------------------------EEECSCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCe---------EEEEECCCc------------------------HHHhccCCEEEE
Confidence            68999999999999999988888988         553 32211                        112467899998


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +..                   ..++...++.|.+++++   +|.-+|
T Consensus        48 FS~-------------------p~~~~~~l~~~~~~~~p---~ViGTT   73 (128)
T d1vm6a3          48 FSS-------------------PEALPKTVDLCKKYRAG---LVLGTT   73 (128)
T ss_dssp             CSC-------------------GGGHHHHHHHHHHHTCE---EEECCC
T ss_pred             ecC-------------------HHHHHHHHHHHHhcCCC---EEEEcC
Confidence            876                   34567889999999985   664333

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.47  E-value=0.00039  Score=53.13  Aligned_cols=106  Identities=16%  Similarity=0.083  Sum_probs=67.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----------ccccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----------DMFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----------~~~~v~~~~~D~~~~~~l~~   92 (366)
                      +||.|+|+ |.+|+.++..|..++. +         +..++..+......          ......+...  .|++    
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~d---------l~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----   65 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGD---------IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSE---------EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcce---------EEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----
Confidence            58999996 9999999999888774 6         88888766532111          0011112110  1222    


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      .+.+.|+||-+||...   ....+..+.+..|......+++...+++.+  -++.+-|
T Consensus        66 ~~~~advvvitag~~~---~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~--aivivvt  118 (142)
T d1uxja1          66 DTANSDVIVVTSGAPR---KPGMSREDLIKVNADITRACISQAAPLSPN--AVIIMVN  118 (142)
T ss_dssp             GGTTCSEEEECCSCC------------CHHHHHHHHHHHHHHHGGGCTT--CEEEECS
T ss_pred             HhcCCCEEEEeeeccC---CcCcchhHHHhHHHHHHHHHHHHHhccCCC--ceEEEeC
Confidence            2578999999999643   234456677889999999999999998876  4454433

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.46  E-value=3.9e-05  Score=61.67  Aligned_cols=74  Identities=22%  Similarity=0.122  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~--~~   96 (366)
                      .+.+|||+||+|-+|...++.+...|.+         |+++++++++.......+...+ .|..+.+   .+.+..  ++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~---------vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g   94 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGAR---------IYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYG   94 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCE---------EEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCC
T ss_pred             CCCEEEEECCCCCcccccchhhcccccc---------ceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCC
Confidence            4578999999999999999988889999         9998877654433333444543 3445543   333333  36


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||.+.|
T Consensus        95 ~d~v~d~~g  103 (183)
T d1pqwa_          95 VDVVLNSLA  103 (183)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            999999988

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.42  E-value=3.5e-05  Score=62.31  Aligned_cols=36  Identities=22%  Similarity=0.392  Sum_probs=33.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      |||.|+||+|.+|++|++.|.+.||+         |.+.+|++.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~---------V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHE---------IVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCE---------EEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCE---------EEEEECCHHH
Confidence            68999999999999999999999999         9999998653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.41  E-value=0.00079  Score=51.38  Aligned_cols=99  Identities=11%  Similarity=-0.008  Sum_probs=69.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----cc-----cccceEEEccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----ED-----MFCHEFHLVDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~~-----~~~v~~~~~D~~~~~~l~~   92 (366)
                      .||.|+|+ |.+|++++..|..+|.  +         +..++..+.....    ..     .....+...  .+.+    
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~E---------lvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~----   65 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIARE---------IVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----   65 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSE---------EEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcE---------EEEEEeccccchhHHHHHHhccccCCCceeecC--CCHH----
Confidence            47999997 9999999999998874  5         8888876543211    00     001122111  1222    


Q ss_pred             hhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        93 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      .++++|+||-+||...   ....+..+.+..|....+.+.....+++.+
T Consensus        66 ~~~daDvVVitaG~~~---~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~  111 (143)
T d1llda1          66 ICRDADMVVITAGPRQ---KPGQSRLELVGATVNILKAIMPNLVKVAPN  111 (143)
T ss_dssp             GGTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HhhCCcEEEEeccccc---CCCCchhhhhhhhHHHHHHHHHHHHhhCCC
Confidence            3678999999999643   334566778999999999999999999866

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.40  E-value=9.4e-05  Score=58.73  Aligned_cols=74  Identities=7%  Similarity=0.022  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ...+|||+||+|-+|+..++.+...|.+         |+++++++.+.......+++.+. |..+...-.....++|+||
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~---------vi~~~~~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~g~D~v~   96 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLR---------VLAAASRPEKLALPLALGAEEAA-TYAEVPERAKAWGGLDLVL   96 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE---------EEEEESSGGGSHHHHHTTCSEEE-EGGGHHHHHHHTTSEEEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccc---------cccccccccccccccccccceee-ehhhhhhhhhccccccccc
Confidence            5678999999999999999988889999         99998876554444444555443 4443322222345899999


Q ss_pred             Eccc
Q 044498          102 NLAA  105 (366)
Q Consensus       102 ~~a~  105 (366)
                      .++|
T Consensus        97 d~~G  100 (171)
T d1iz0a2          97 EVRG  100 (171)
T ss_dssp             ECSC
T ss_pred             cccc
Confidence            9877

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=0.00025  Score=55.27  Aligned_cols=100  Identities=10%  Similarity=-0.025  Sum_probs=69.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC--CCCCCCCccEEEEEeCCCccccc----c------ccccceEEEccCCChhH
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH--YSTSIPNALYIIASDWNKNEHMM----E------DMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~--~~~~~~~~~~V~~~~r~~~~~~~----~------~~~~v~~~~~D~~~~~~   89 (366)
                      +..||.|+|+ |.+|+.++..|..+|.  +         +..+++.......    .      ..........   +.+ 
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~e---------lvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~---d~~-   83 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADE---------LALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK---DYN-   83 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSE---------EEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES---SGG-
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCE---------EEEEeCCchhhhccHHHHhCcchhcCCCeEEecc---chh-
Confidence            3458999996 9999999999998874  5         8888876542110    0      0111111122   222 


Q ss_pred             HHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           90 CLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        90 l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                         .++++|+||..||...   ....+..+.+..|+...+.+.....+++.+
T Consensus        84 ---~~~~adivvitag~~~---~~~~~R~dll~~N~~i~~~i~~~i~~~~p~  129 (159)
T d2ldxa1          84 ---VSANSKLVIITAGARM---VSGQTRLDLLQRNVAIMKAIVPGVIQNSPD  129 (159)
T ss_dssp             ---GGTTEEEEEECCSCCC---CTTTCSSCTTHHHHHHHHHHTTTHHHHSTT
T ss_pred             ---hhccccEEEEeccccc---CCCCCHHHHHHHHHHHHHHHHHHHhccCCC
Confidence               3578999999998643   334566777999999999999999988766

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.0011  Score=51.18  Aligned_cols=72  Identities=7%  Similarity=-0.063  Sum_probs=57.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc----ccccccceEEEccCCChhHHHhh-hcCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM----MEDMFCHEFHLVDLRVMDNCLRM-TSGVD   98 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~----~~~~~~v~~~~~D~~~~~~l~~~-~~~~d   98 (366)
                      -+|+|+|. |-+|..+++.|.+.|++         |++++..+....    .....++.++.||.++++.+.++ +++++
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~---------v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~   73 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQN---------VTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCR   73 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCC---------EEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC---------EEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCC
Confidence            46999996 99999999999999999         999988764321    22334679999999999988876 57899


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      .||-+..
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            9996654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.26  E-value=8.7e-05  Score=59.00  Aligned_cols=24  Identities=29%  Similarity=0.497  Sum_probs=21.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSE   46 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~   46 (366)
                      |+||.|+||||++|+.|++.|.+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~H   24 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNH   24 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhC
Confidence            689999999999999999988764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.25  E-value=0.0015  Score=50.24  Aligned_cols=110  Identities=17%  Similarity=0.109  Sum_probs=72.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCcccccc----c------cccceEEEccCCChhHHH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMME----D------MFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~----~------~~~v~~~~~D~~~~~~l~   91 (366)
                      ++||.|+|+ |.+|+.++..|..++. +         +..+++........    .      .....+...  .+.    
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~e---------l~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~--~~~----   66 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGD---------VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTY----   66 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCE---------EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCG----
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCe---------EEEEeccCCcceeeecchhhhccccCCCcEEEec--ccc----
Confidence            468999995 9999999987777663 4         88898766432111    0      011112211  122    


Q ss_pred             hhhcCCCEEEEcccccCCcccc--ccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           92 RMTSGVDNMSNLAADMGGMGFI--QSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        92 ~~~~~~d~vi~~a~~~~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      +.++++|+||-+++....+...  ..+....+..|....+.+.+.+.+++.+  -++.+-|
T Consensus        67 ~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~--aivivvt  125 (150)
T d1t2da1          67 DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN--AFIIVVT  125 (150)
T ss_dssp             GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTT--SEEEECS
T ss_pred             cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCC--eEEEEec
Confidence            2357899999999965432211  2246677899999999999999999876  4544433

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.22  E-value=0.00026  Score=54.82  Aligned_cols=65  Identities=17%  Similarity=0.130  Sum_probs=46.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |||.|+| .|.+|+.+++.|++.|++         |++.++.+.........++.+..       ...++++.+|+||-+
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~---------v~~~~~~~~~~~~~~~~~~~~~~-------~~~e~~~~~diIi~~   63 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVE---------VVTSLEGRSPSTIERARTVGVTE-------TSEEDVYSCPVVISA   63 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCE---------EEECCTTCCHHHHHHHHHHTCEE-------CCHHHHHTSSEEEEC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCe---------EEEEcCchhHHHHHhhhcccccc-------cHHHHHhhcCeEEEE
Confidence            6899998 699999999999999999         99988776554333222222221       123456789999977


Q ss_pred             cc
Q 044498          104 AA  105 (366)
Q Consensus       104 a~  105 (366)
                      ..
T Consensus        64 v~   65 (152)
T d1i36a2          64 VT   65 (152)
T ss_dssp             SC
T ss_pred             ec
Confidence            65

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.19  E-value=8.3e-05  Score=58.25  Aligned_cols=71  Identities=11%  Similarity=0.118  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++++|||+|+ |-+|+.+++.|...|...        |++..|...+..... ..+..     ..+.+++...+.++|+|
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~--------i~v~nRt~~ka~~l~~~~~~~-----~~~~~~~~~~l~~~Div   88 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRA--------VLVANRTYERAVELARDLGGE-----AVRFDELVDHLARSDVV   88 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSE--------EEEECSSHHHHHHHHHHHTCE-----ECCGGGHHHHHHTCSEE
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcE--------EEEEcCcHHHHHHHHHhhhcc-----cccchhHHHHhccCCEE
Confidence            6789999997 999999999999999741        888888755433221 11212     23345677788899999


Q ss_pred             EEcccc
Q 044498          101 SNLAAD  106 (366)
Q Consensus       101 i~~a~~  106 (366)
                      |.+.+.
T Consensus        89 i~atss   94 (159)
T d1gpja2          89 VSATAA   94 (159)
T ss_dssp             EECCSS
T ss_pred             EEecCC
Confidence            999884

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.18  E-value=0.00058  Score=53.80  Aligned_cols=38  Identities=21%  Similarity=0.271  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      |++|+|+| .|.+|..+++.|.+.|+.       .+|+++++++..
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~-------~~I~~~D~~~~~   38 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFK-------GKIYGYDINPES   38 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCC-------SEEEEECSCHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCC-------eEEEEEECChHH
Confidence            56899998 599999999999999863       128888887653

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.11  E-value=0.00049  Score=54.19  Aligned_cols=74  Identities=9%  Similarity=0.017  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceE-EEccCC--ChhHHHhhh----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEF-HLVDLR--VMDNCLRMT----   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~-~~~D~~--~~~~l~~~~----   94 (366)
                      .+.+|+|+| +|-+|...++.+...|.+         |+++++++.+.......+... +..|-.  +...+.+.+    
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~---------vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~   95 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAF---------VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAI   95 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhccc---------ccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhccc
Confidence            456899998 699999999988888999         999998876544333333332 233322  223332322    


Q ss_pred             -cCCCEEEEccc
Q 044498           95 -SGVDNMSNLAA  105 (366)
Q Consensus        95 -~~~d~vi~~a~  105 (366)
                       .++|+||.++|
T Consensus        96 g~g~D~vid~~g  107 (170)
T d1e3ja2          96 GDLPNVTIDCSG  107 (170)
T ss_dssp             SSCCSEEEECSC
T ss_pred             ccCCceeeecCC
Confidence             36999999998

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.11  E-value=0.0011  Score=46.59  Aligned_cols=86  Identities=14%  Similarity=-0.048  Sum_probs=59.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-ccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-MEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++++|+|+|. |-.|..+++.|.++|++         |++.+....... ......+.+..+... .    ..+.++|.|
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~---------v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~d~v   68 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVT---------PRVMDTRMTPPGLDKLPEAVERHTGSLN-D----EWLMAADLI   68 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCC---------CEEEESSSSCTTGGGSCTTSCEEESBCC-H----HHHHHCSEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCE---------EEEeeCCcCchhHHHHhhccceeecccc-h----hhhccCCEE
Confidence            6789999997 88999999999999999         999997654322 222223344444432 2    234678999


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      |-..|...      .             ..++..|++.+++
T Consensus        69 i~SPGi~~------~-------------~~~~~~a~~~gi~   90 (93)
T d2jfga1          69 VASPGIAL------A-------------HPSLSAAADAGIE   90 (93)
T ss_dssp             EECTTSCT------T-------------SHHHHHHHHTTCE
T ss_pred             EECCCCCC------C-------------CHHHHHHHHcCCC
Confidence            98777431      1             1478888888874

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.11  E-value=0.00041  Score=56.44  Aligned_cols=73  Identities=16%  Similarity=0.090  Sum_probs=47.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccC-------------CChhHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL-------------RVMDNC   90 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~-------------~~~~~l   90 (366)
                      |||.|+| .||+|..++..|.+.|++         |++++.++..-.........+.+..+             .-..++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~---------V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~   70 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHE---------VIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDF   70 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCc---------EEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCH
Confidence            6899997 699999999999999999         99999765432111111011111111             111234


Q ss_pred             HhhhcCCCEEEEcccc
Q 044498           91 LRMTSGVDNMSNLAAD  106 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~  106 (366)
                      .++++++|+++-|.+-
T Consensus        71 ~~~i~~~d~i~i~VpT   86 (202)
T d1mv8a2          71 KKAVLDSDVSFICVGT   86 (202)
T ss_dssp             HHHHHTCSEEEECCCC
T ss_pred             HHHHhhCCEEEEecCc
Confidence            4556789999988873

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.11  E-value=0.0016  Score=50.76  Aligned_cols=95  Identities=14%  Similarity=0.026  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------------ccccceEEEccCCChhH
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------------DMFCHEFHLVDLRVMDN   89 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------------~~~~v~~~~~D~~~~~~   89 (366)
                      |++|.++| .|.+|+.+++.|++.||+         |.+++|++......             ......++..-+.+...
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~---------v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~   70 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYL---------LNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQH   70 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCE---------EEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCe---------EEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhh
Confidence            67899998 799999999999999999         99999875532111             11122445555555544


Q ss_pred             HHhhhc----------CCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498           90 CLRMTS----------GVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus        90 l~~~~~----------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      ...++.          .=++||.+...                 ....+..+.+.+++.++   +|+-
T Consensus        71 ~~~v~~~~~~~~~~l~~g~iiid~st~-----------------~p~~~~~~~~~~~~~gi---~~~d  118 (162)
T d3cuma2          71 VEGLYLDDDGLLAHIAPGTLVLECSTI-----------------APTSARKIHAAARERGL---AMLD  118 (162)
T ss_dssp             HHHHHHSTTCHHHHSCTTCEEEECSCC-----------------CHHHHHHHHHHHHHTTC---EEEE
T ss_pred             HHHHHhccccccccCCCCCEEEECCCC-----------------CHHHHHHHHHHHHHCCC---cEEe
Confidence            443321          23566665552                 14556778888888877   5774

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00026  Score=55.42  Aligned_cols=99  Identities=11%  Similarity=0.072  Sum_probs=59.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEeCCCccccccccccc-eEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASDWNKNEHMMEDMFCH-EFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v-~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ..+||+|.|++|-+|+.+++.+.+. +.+.        +-+++|............+ .....++.-...+...++.+|+
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~l--------v~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DV   74 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQL--------GAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDV   74 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEEC--------CCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEE--------EEEEecccchhccchhhhhhccccCCceeeccHHHHhcccce
Confidence            4579999999999999999998876 4551        3345554332211100000 0000011111223345678999


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      ||.+.-                   ..++...+++|.+++++   +|.-+|
T Consensus        75 iIDFs~-------------------p~~~~~~~~~a~~~~~~---~ViGTT  103 (162)
T d1diha1          75 FIDFTR-------------------PEGTLNHLAFCRQHGKG---MVIGTT  103 (162)
T ss_dssp             EEECSC-------------------HHHHHHHHHHHHHTTCE---EEECCC
T ss_pred             EEEecc-------------------HHHHHHHHHHHHhccce---eEEecC
Confidence            998866                   56677899999999985   664333

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.09  E-value=0.00038  Score=54.06  Aligned_cols=24  Identities=13%  Similarity=0.356  Sum_probs=21.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERH   48 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~   48 (366)
                      ||.|+||||++|+.|++.|.+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999997776644

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.07  E-value=0.0042  Score=46.25  Aligned_cols=88  Identities=13%  Similarity=0.165  Sum_probs=60.7

Q ss_pred             CCCeEEEEcCC---CchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCC
Q 044498           22 GKLRISSIGVG---GFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        22 ~~~~vlItGat---G~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      ..++|.|+|||   |..|..+++.|.+.| .+         |+.+......-            ..+....++.++-..+
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~---------v~pVnP~~~~i------------~G~~~y~sl~dlp~~v   65 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGK---------VYPVNIKEEEV------------QGVKAYKSVKDIPDEI   65 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSE---------EEEECSSCSEE------------TTEECBSSTTSCSSCC
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCc---------EEEeccCcccc------------CCeEeecchhhcCCCC
Confidence            56799999999   999999999987655 46         88886432210            1111122333334578


Q ss_pred             CEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecc
Q 044498           98 DNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA  151 (366)
Q Consensus        98 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~  151 (366)
                      |.++-+..                   ...+..+++.+.+.+++  .++.+|+.
T Consensus        66 Dlvvi~vp-------------------~~~~~~~~~~~~~~g~~--~~vi~s~G   98 (129)
T d2csua1          66 DLAIIVVP-------------------KRFVKDTLIQCGEKGVK--GVVIITAG   98 (129)
T ss_dssp             SEEEECSC-------------------HHHHHHHHHHHHHHTCC--EEEECCCS
T ss_pred             ceEEEecC-------------------hHHhHHHHHHHHHcCCC--EEEEeccc
Confidence            99886665                   45566788999999998  88887774

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.06  E-value=0.00085  Score=53.42  Aligned_cols=72  Identities=8%  Similarity=0.036  Sum_probs=49.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc--------ccccccceEEEccCCChhHHHhhhc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM--------MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~--------~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      |+|.|+|+ |..|.+++..|.+.|++         |+.+.|..+...        .........-...+.-.+++.++++
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~---------V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   70 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNE---------VRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE   70 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCE---------EEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh
Confidence            78999995 99999999999999999         999987533211        0001111111222333566788889


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||.+..
T Consensus        71 ~ad~Ii~avp   80 (180)
T d1txga2          71 NAEVVLLGVS   80 (180)
T ss_dssp             TCSEEEECSC
T ss_pred             ccchhhcccc
Confidence            9999997655

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.03  E-value=0.00041  Score=54.67  Aligned_cols=75  Identities=12%  Similarity=-0.031  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+.+|+|+|+ |.+|...++.+...|.+         |+++++++.+.......+...+.-...+.+..+...+++|.++
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~---------vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi   96 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAE---------TYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIV   96 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE---------EEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhcccc---------ccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEE
Confidence            5678999996 99999999888888999         9999998776544444455544322233444555556899999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+.+.
T Consensus        97 ~~~~~  101 (168)
T d1piwa2          97 VCASS  101 (168)
T ss_dssp             ECCSC
T ss_pred             EEecC
Confidence            98774

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.00  E-value=0.0012  Score=52.37  Aligned_cols=72  Identities=10%  Similarity=-0.076  Sum_probs=48.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccc--------cceEEEccCCChhHHHhhhc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMF--------CHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~--------~v~~~~~D~~~~~~l~~~~~   95 (366)
                      +||.|+|+ |.+|..++..|.++|++         |.+++|.+.........        .............++.+.++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~---------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~   71 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQS---------VLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK   71 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCE---------EEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc
Confidence            68999996 99999999999999999         99999975432211110        11111111111233567788


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||-+..
T Consensus        72 ~aD~iii~v~   81 (184)
T d1bg6a2          72 DADVILIVVP   81 (184)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEEEEc
Confidence            9999997654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.99  E-value=0.0026  Score=46.27  Aligned_cols=92  Identities=12%  Similarity=-0.023  Sum_probs=63.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--ccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--DMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++++|||+|+ |-+|..-++.|++.|.+         |++++.........  ...++++....+.+.+     +.+++.
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~---------v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d-----l~~~~l   75 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGAR---------LTVNALTFIPQFTVWANEGMLTLVEGPFDETL-----LDSCWL   75 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBE---------EEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-----GTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe---------EEEEeccCChHHHHHHhcCCceeeccCCCHHH-----hCCCcE
Confidence            6789999995 99999999999999999         99988655433221  2234566666655432     567888


Q ss_pred             EEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498          100 MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus       100 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                      |+.+.+.                  -.....+.+.|++.++    +|.+..
T Consensus        76 v~~at~d------------------~~~n~~i~~~a~~~~i----lVNv~D  104 (113)
T d1pjqa1          76 AIAATDD------------------DTVNQRVSDAAESRRI----FCNVVD  104 (113)
T ss_dssp             EEECCSC------------------HHHHHHHHHHHHHTTC----EEEETT
T ss_pred             EeecCCC------------------HHHHHHHHHHHHHcCC----EEEeCC
Confidence            8855541                  2233468888888875    576543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.00025  Score=56.49  Aligned_cols=74  Identities=9%  Similarity=-0.092  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH---hhhc--C
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL---RMTS--G   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~---~~~~--~   96 (366)
                      ...+|||+||+|-+|..+++-+...|.+         |+++++++.+.......+...+ .|..+.+..+   ++-.  +
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~---------Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAK---------LIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCE---------EEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCe---------EeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCC
Confidence            4578999999999999999988888999         9999988776554444454544 3555544333   3322  5


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+|+.+++
T Consensus        98 ~d~v~d~~g  106 (179)
T d1qora2          98 VRVVYDSVG  106 (179)
T ss_dssp             EEEEEECSC
T ss_pred             eEEEEeCcc
Confidence            899999887

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.97  E-value=0.0005  Score=53.75  Aligned_cols=65  Identities=14%  Similarity=0.151  Sum_probs=47.4

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEEc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNL  103 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~~  103 (366)
                      |||.|+| .|.+|+.+++.|++.|++         |++.+|++.........+...       .....++++++|+||-|
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~---------V~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~d~ii~~   63 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYS---------LVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITM   63 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCe---------EEEEeCCcchhHHHHHhhhhh-------cccHHHHHhCCCeEEEE
Confidence            6899999 699999999999999999         999999876543332222111       12244556789999977


Q ss_pred             cc
Q 044498          104 AA  105 (366)
Q Consensus       104 a~  105 (366)
                      ..
T Consensus        64 v~   65 (161)
T d1vpda2          64 LP   65 (161)
T ss_dssp             CS
T ss_pred             cC
Confidence            65

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.94  E-value=0.0014  Score=48.86  Aligned_cols=70  Identities=10%  Similarity=-0.043  Sum_probs=55.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhh-hcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRM-TSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~-~~~~d~vi~  102 (366)
                      ++|+|+|. |-+|+.+++.|.  |++         |.+++..+.........++.++.||.++++.+.++ +++++.+|-
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~---------i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSE---------VFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIV   68 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGG---------EEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCC---------CEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEE
Confidence            46889985 999999999984  567         88888877655555556789999999999988886 578999995


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +..
T Consensus        69 ~~~   71 (129)
T d2fy8a1          69 NLE   71 (129)
T ss_dssp             CCS
T ss_pred             ecc
Confidence            543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.90  E-value=0.0006  Score=54.10  Aligned_cols=74  Identities=14%  Similarity=-0.006  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh-hHHHhhh--cCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM-DNCLRMT--SGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~-~~l~~~~--~~~d   98 (366)
                      ...+|||+||+|-+|+..++-....|.+         |++.++++.+.......+...+. |..+. ++..+..  +++|
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~---------Viat~~s~~k~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~gvD  100 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYT---------VEASTGKAAEHDYLRVLGAKEVL-AREDVMAERIRPLDKQRWA  100 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCC---------EEEEESCTTCHHHHHHTTCSEEE-ECC---------CCSCCEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCc---------eEEecCchHHHHHHHhcccceee-ecchhHHHHHHHhhccCcC
Confidence            4578999999999999999988889999         99999887765544444445443 33322 1121222  3699


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||.+.|
T Consensus       101 ~vid~vg  107 (176)
T d1xa0a2         101 AAVDPVG  107 (176)
T ss_dssp             EEEECST
T ss_pred             EEEEcCC
Confidence            9999988

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.00024  Score=56.58  Aligned_cols=74  Identities=11%  Similarity=-0.006  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-cCCCEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-SGVDNM  100 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-~~~d~v  100 (366)
                      ...+|||+||+|-+|+..++-....|.+         |+++++++.+.......+...+. |..+.+..+.+. ...|.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~---------Via~~~~~~k~~~~~~lGad~vi-~~~~~~~~~~l~~~~~~~v  100 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQ---------VVAVSGRESTHEYLKSLGASRVL-PRDEFAESRPLEKQVWAGA  100 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCC---------EEEEESCGGGHHHHHHHTEEEEE-EGGGSSSCCSSCCCCEEEE
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCC---------eEEEecchhHHHHHHhhcccccc-ccccHHHHHHHHhhcCCee
Confidence            3458999999999999999988889999         99999887765444444444443 333332222222 246888


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |++.+
T Consensus       101 vD~Vg  105 (177)
T d1o89a2         101 IDTVG  105 (177)
T ss_dssp             EESSC
T ss_pred             EEEcc
Confidence            88877

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0019  Score=53.12  Aligned_cols=73  Identities=11%  Similarity=-0.138  Sum_probs=51.0

Q ss_pred             CCCeEEEEc----------------CCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC
Q 044498           22 GKLRISSIG----------------VGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR   85 (366)
Q Consensus        22 ~~~~vlItG----------------atG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~   85 (366)
                      ++++||||+                .||..|.+|++.+..+|++         |+.+.........   .++..+..  .
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~---------V~li~g~~~~~~p---~~~~~~~~--~   70 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN---------VTLVSGPVSLPTP---PFVKRVDV--M   70 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE---------EEEEECSCCCCCC---TTEEEEEC--C
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCc---------hhhhhcccccCcc---ccccccee--h
Confidence            567888886                4799999999999999999         9998865543222   12344433  3


Q ss_pred             ChhH----HHhhhcCCCEEEEcccccC
Q 044498           86 VMDN----CLRMTSGVDNMSNLAADMG  108 (366)
Q Consensus        86 ~~~~----l~~~~~~~d~vi~~a~~~~  108 (366)
                      ..++    +...+.++|++|++|+...
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             hhHHHHHHHHhhhccceeEeeeechhh
Confidence            3333    3344568999999999654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.0022  Score=50.33  Aligned_cols=74  Identities=8%  Similarity=-0.009  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEE-EccCCChhHHHhhh-----
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFH-LVDLRVMDNCLRMT-----   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~-~~D~~~~~~l~~~~-----   94 (366)
                      .+.+|+|+|+ |-+|...+..+...|. +         |+++++++.+.......+.+.+ ..+-.+.....+.+     
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~---------Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQ---------VVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCce---------EEeccCCHHHHHHHHHhCCcccccccccccccccccccccCC
Confidence            4568999986 9999999998888997 5         9999888765444334444433 33334444444433     


Q ss_pred             cCCCEEEEccc
Q 044498           95 SGVDNMSNLAA  105 (366)
Q Consensus        95 ~~~d~vi~~a~  105 (366)
                      .++|+||.++|
T Consensus        96 ~g~Dvvid~~G  106 (171)
T d1pl8a2          96 CKPEVTIECTG  106 (171)
T ss_dssp             SCCSEEEECSC
T ss_pred             CCceEEEeccC
Confidence            26999999998

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.001  Score=52.27  Aligned_cols=74  Identities=12%  Similarity=0.070  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ...+|+|.|+ |-||...++.+...|.+         +++++++..+.......+...+ .|..+.+......+++|++|
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~---------~i~~~~~~~~~~~a~~lGad~~-i~~~~~~~~~~~~~~~D~vi   98 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAH---------VVAFTTSEAKREAAKALGADEV-VNSRNADEMAAHLKSFDFIL   98 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSGGGHHHHHHHTCSEE-EETTCHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhccccc---------chhhccchhHHHHHhccCCcEE-EECchhhHHHHhcCCCceee
Confidence            4678999996 88999999988889998         8888887665433334444443 46666666666667899999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+.+.
T Consensus        99 d~~g~  103 (168)
T d1uufa2          99 NTVAA  103 (168)
T ss_dssp             ECCSS
T ss_pred             eeeec
Confidence            99884

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.70  E-value=0.00042  Score=55.48  Aligned_cols=25  Identities=28%  Similarity=0.586  Sum_probs=22.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE   46 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~   46 (366)
                      +++||.|+||||+.|+.|++.|.+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~H   28 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANH   28 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhC
Confidence            5679999999999999999988764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.0012  Score=44.28  Aligned_cols=38  Identities=16%  Similarity=0.086  Sum_probs=33.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      +.++|||+||+|-+|+..++.+...|.+         |+++++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~---------Vi~~t~s~~k   68 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQ---------VVAVSGREST   68 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCC---------EEEEESCGGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCe---------EEEEECCHHH
Confidence            5678999999999999999988888999         9999887654

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.57  E-value=0.001  Score=52.95  Aligned_cols=74  Identities=14%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCC--ChhHH----Hhhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR--VMDNC----LRMT   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~--~~~~l----~~~~   94 (366)
                      .+.+|||+|+ |-||...++.+...|. +         |+++++++.+.......+...+ .|..  +..+.    .+..
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~---------Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~   96 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAEN---------VIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERRKAIMDIT   96 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSE---------EEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccc---------ccccccccccccccccccceEE-EeccccchHHHHHHHHHhh
Confidence            4578999996 8999999999988996 6         9999988765444333444333 2333  32222    2222


Q ss_pred             --cCCCEEEEcccc
Q 044498           95 --SGVDNMSNLAAD  106 (366)
Q Consensus        95 --~~~d~vi~~a~~  106 (366)
                        .++|+||.++|.
T Consensus        97 ~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 HGRGADFILEATGD  110 (182)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCceEEeecCCc
Confidence              258999999883

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0032  Score=50.00  Aligned_cols=77  Identities=12%  Similarity=-0.033  Sum_probs=58.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      +.++|+|+|+ |..|++++..|.+.|...        +++++|.+......        ..........++.+.+.+...
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~--------i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKE--------IKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEA   87 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSE--------EEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCce--------EeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhh
Confidence            6689999996 888999999999998641        88888876532211        112234567888888888888


Q ss_pred             hcCCCEEEEccccc
Q 044498           94 TSGVDNMSNLAADM  107 (366)
Q Consensus        94 ~~~~d~vi~~a~~~  107 (366)
                      +..+|+|||+....
T Consensus        88 ~~~~diiIN~Tp~G  101 (182)
T d1vi2a1          88 LASADILTNGTKVG  101 (182)
T ss_dssp             HHTCSEEEECSSTT
T ss_pred             hcccceeccccCCc
Confidence            89999999998753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.51  E-value=0.00093  Score=53.63  Aligned_cols=73  Identities=10%  Similarity=0.060  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChhHHHhh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMDNCLRM   93 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~~l~~~   93 (366)
                      .|+||.|+|| |..|.+++..|.+.|++         |++++|++......        ...++.+ .-++.-..++.++
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~---------V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a   74 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCRE---------VCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKA   74 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEEE---------EEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHH
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCCe---------EEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhc
Confidence            5678999995 99999999999999999         99999865421100        0011111 1122222346777


Q ss_pred             hcCCCEEEEccc
Q 044498           94 TSGVDNMSNLAA  105 (366)
Q Consensus        94 ~~~~d~vi~~a~  105 (366)
                      ++++|+||.+..
T Consensus        75 ~~~ad~iiiavP   86 (189)
T d1n1ea2          75 YNGAEIILFVIP   86 (189)
T ss_dssp             HTTCSCEEECSC
T ss_pred             cCCCCEEEEcCc
Confidence            889999996654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.49  E-value=0.00067  Score=53.34  Aligned_cols=71  Identities=10%  Similarity=-0.059  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-----cCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-----SGV   97 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-----~~~   97 (366)
                      +..|||+||+|-+|...++-....|.+         |+++.++..+.......+...+. |..+  ...+..     +++
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~---------Viat~~s~~k~~~~~~lGad~vi-~~~~--~~~~~~~~~~~~gv   91 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYD---------VVASTGNREAADYLKQLGASEVI-SRED--VYDGTLKALSKQQW   91 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCC---------EEEEESSSSTHHHHHHHTCSEEE-EHHH--HCSSCCCSSCCCCE
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCc---------eEEEecCHHHHHHHHhhcccceE-eccc--hhchhhhcccCCCc
Confidence            446999999999999999988888999         99999987765555555555542 2221  111111     368


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||.+.+
T Consensus        92 d~vid~vg   99 (167)
T d1tt7a2          92 QGAVDPVG   99 (167)
T ss_dssp             EEEEESCC
T ss_pred             eEEEecCc
Confidence            99999887

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.49  E-value=0.00075  Score=53.42  Aligned_cols=74  Identities=15%  Similarity=0.096  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh---hHHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM---DNCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~---~~l~~~~~--   95 (366)
                      ...+|+|+|+ |-||...++.+...|. +         |+++++++.+.......+...+ .|..+.   +.+.+...  
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~---------Vi~~d~~~~r~~~a~~lGa~~~-i~~~~~~~~~~v~~~t~g~   95 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGR---------IIGVGSRPICVEAAKFYGATDI-LNYKNGHIEDQVMKLTNGK   95 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSC---------EEEECCCHHHHHHHHHHTCSEE-ECGGGSCHHHHHHHHTTTS
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccc---------cccccchhhhHHHHHhhCcccc-ccccchhHHHHHHHHhhcc
Confidence            4568999986 9999999998888896 6         9999987765444444444332 243333   23334332  


Q ss_pred             CCCEEEEcccc
Q 044498           96 GVDNMSNLAAD  106 (366)
Q Consensus        96 ~~d~vi~~a~~  106 (366)
                      ++|+||.++|.
T Consensus        96 G~D~vid~~g~  106 (174)
T d1jqba2          96 GVDRVIMAGGG  106 (174)
T ss_dssp             CEEEEEECSSC
T ss_pred             CcceEEEccCC
Confidence            59999999983

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.45  E-value=0.016  Score=40.46  Aligned_cols=73  Identities=19%  Similarity=0.028  Sum_probs=50.1

Q ss_pred             CCCCCCCeEEEEcCCCchh-HHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-ccccccceEEEccCCChhHHHhhhc
Q 044498           18 HWPSGKLRISSIGVGGFIP-SNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-MEDMFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~iG-~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~~~~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ++|..+++|.++|- |-+| +.|++.|.++|+.         |.+.|+...... .....++.+..+.-.  +    .+.
T Consensus         3 ~~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~---------VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~----~i~   66 (96)
T d1p3da1           3 PEMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQ---------ISGSDIADGVVTQRLAQAGAKIYIGHAE--E----HIE   66 (96)
T ss_dssp             CCCTTCCEEEEETT-TSTTHHHHHHHHHHHTCE---------EEEEESCCSHHHHHHHHTTCEEEESCCG--G----GGT
T ss_pred             ccchhCCEEEEEEE-CHHHHHHHHHHHHhCCCE---------EEEEeCCCChhhhHHHHCCCeEEECCcc--c----cCC
Confidence            45667889999986 4445 7789999999999         999998754322 223345565554432  1    246


Q ss_pred             CCCEEEEcccc
Q 044498           96 GVDNMSNLAAD  106 (366)
Q Consensus        96 ~~d~vi~~a~~  106 (366)
                      ++|.||...+.
T Consensus        67 ~~d~vV~S~AI   77 (96)
T d1p3da1          67 GASVVVVSSAI   77 (96)
T ss_dssp             TCSEEEECTTS
T ss_pred             CCCEEEECCCc
Confidence            78999988774

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.38  E-value=0.00062  Score=54.59  Aligned_cols=73  Identities=10%  Similarity=0.024  Sum_probs=45.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChh---HHHhhh-cCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMD---NCLRMT-SGVD   98 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~---~l~~~~-~~~d   98 (366)
                      ..|||+||+|-+|+..++-....|..+        |++++.+..+.... ...+.. ...|..+.+   .+.++. +++|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~--------vi~~~~~~e~~~~l~~~~gad-~vi~~~~~~~~~~~~~~~~~GvD  102 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSR--------VVGICGTQEKCLFLTSELGFD-AAVNYKTGNVAEQLREACPGGVD  102 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSE--------EEEEESSHHHHHHHHHHSCCS-EEEETTSSCHHHHHHHHCTTCEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcc--------eecccchHHHHhhhhhcccce-EEeeccchhHHHHHHHHhccCce
Confidence            579999999999999999888889760        44455544333222 112223 223444332   222222 3699


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +|+.+.|
T Consensus       103 vv~D~vG  109 (187)
T d1vj1a2         103 VYFDNVG  109 (187)
T ss_dssp             EEEESSC
T ss_pred             EEEecCC
Confidence            9999988

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.30  E-value=0.0059  Score=48.07  Aligned_cols=72  Identities=10%  Similarity=-0.012  Sum_probs=50.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccc--eEEEccCCChhHHHhhhcCCCEE
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCH--EFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v--~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      +.+|.|+| .|.+|..+++.|++.|++         |++++|++.+.......+.  .... .....+.+...+..+|.+
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~---------V~v~dr~~~~~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~i   70 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFV---------VCAFNRTVSKVDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRI   70 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCC---------EEEECSSTHHHHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEE
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCe---------EEEEcCCHHHHHHHHHhcccccccc-chhhhhhhhhhhcccceE
Confidence            35799999 599999999999999999         9999998765432211100  1111 133556677777889999


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      |-+..
T Consensus        71 i~~~~   75 (176)
T d2pgda2          71 ILLVK   75 (176)
T ss_dssp             EECSC
T ss_pred             EEecC
Confidence            87655

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.26  E-value=0.0017  Score=50.42  Aligned_cols=77  Identities=9%  Similarity=-0.035  Sum_probs=59.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ...+|+|+|+ |..|..-++.....|.+         |.+++.+..............+..-..+.+.+.+.++++|+||
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~---------V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI  100 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQ---------VQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLI  100 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCE---------EEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEE
Confidence            4679999996 99999999999999999         9999987654432222212334444567788999999999999


Q ss_pred             EcccccC
Q 044498          102 NLAADMG  108 (366)
Q Consensus       102 ~~a~~~~  108 (366)
                      .++-..+
T Consensus       101 ~aalipG  107 (168)
T d1pjca1         101 GAVLVPG  107 (168)
T ss_dssp             ECCCCTT
T ss_pred             EeeecCC
Confidence            9888654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.26  E-value=0.0015  Score=51.65  Aligned_cols=74  Identities=15%  Similarity=0.092  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhhc-CC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMTS-GV   97 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~~-~~   97 (366)
                      .+.+|+|+|+ |.||...+..+...|..+        |++.++++.+.......+...+ .|..+.+.   +.++.. ++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~--------v~~~~~~~~k~~~a~~~Ga~~~-i~~~~~~~~~~i~~~t~gg~   97 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASI--------IIAVDIVESRLELAKQLGATHV-INSKTQDPVAAIKEITDGGV   97 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSE--------EEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTSCE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccce--------eeeeccHHHHHHHHHHcCCeEE-EeCCCcCHHHHHHHHcCCCC
Confidence            4678999997 999999999888888761        4556665544333333343322 23444332   333322 59


Q ss_pred             CEEEEccc
Q 044498           98 DNMSNLAA  105 (366)
Q Consensus        98 d~vi~~a~  105 (366)
                      |+||.+.|
T Consensus        98 D~vid~~G  105 (174)
T d1f8fa2          98 NFALESTG  105 (174)
T ss_dssp             EEEEECSC
T ss_pred             cEEEEcCC
Confidence            99999988

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.23  E-value=0.0018  Score=50.74  Aligned_cols=74  Identities=16%  Similarity=0.206  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-----c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-----S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-----~   95 (366)
                      ...+|+|+|++|-+|...+..+...|. .         |+++++++.+.......+...+ .|..+.+..++..     .
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~---------V~~~~~~~~~~~~~~~~Ga~~~-i~~~~~~~~~~~~~~~~~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGAT---------IIGVDVREEAVEAAKRAGADYV-INASMQDPLAEIRRITESK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCE---------EEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTS
T ss_pred             CCCEEEEEeccccceeeeeeccccccccc---------ccccccchhhHHHHHHcCCcee-eccCCcCHHHHHHHHhhcc
Confidence            456899999999999999998988885 6         8888887665444333444332 2333333233322     2


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|+||.+++
T Consensus        97 ~~d~vid~~g  106 (170)
T d1jvba2          97 GVDAVIDLNN  106 (170)
T ss_dssp             CEEEEEESCC
T ss_pred             cchhhhcccc
Confidence            5899999988

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.21  E-value=0.0012  Score=50.98  Aligned_cols=65  Identities=20%  Similarity=0.184  Sum_probs=45.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |||.|+| +|.+|+++++.|.+.|++         |++.+|+.++.... ...++...       .+..++++++|+||-
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~---------i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~~~~~~dvIil   63 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHE---------LIISGSSLERSKEIAEQLALPYA-------MSHQDLIDQVDLVIL   63 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCE---------EEEECSSHHHHHHHHHHHTCCBC-------SSHHHHHHTCSEEEE
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCe---------EEEEcChHHhHHhhccccceeee-------chhhhhhhccceeee
Confidence            6899998 699999999999999999         99998876543322 11122221       124455678999996


Q ss_pred             ccc
Q 044498          103 LAA  105 (366)
Q Consensus       103 ~a~  105 (366)
                      +.-
T Consensus        64 avk   66 (152)
T d2ahra2          64 GIK   66 (152)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.16  E-value=0.012  Score=43.94  Aligned_cols=68  Identities=15%  Similarity=0.224  Sum_probs=47.1

Q ss_pred             eEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEE-EeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           25 RISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIA-SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~-~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      ||.|+|++|-.|+.+++.+.+. +++         +.+ +++...                   ...+  ...++|+||.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~---------l~~~~d~~~~-------------------~~~~--~~~~~DvvID   50 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLT---------LSAELDAGDP-------------------LSLL--TDGNTEVVID   50 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSE---------EEEEECTTCC-------------------THHH--HTTTCSEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCE---------EEEEEecCCc-------------------hhhh--ccccCCEEEE
Confidence            7999999999999999988765 455         443 332110                   1111  1247999998


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +..                   ...+...++.|.+++++
T Consensus        51 FS~-------------------p~~~~~~~~~~~~~~~~   70 (135)
T d1yl7a1          51 FTH-------------------PDVVMGNLEFLIDNGIH   70 (135)
T ss_dssp             CCC-------------------TTTHHHHHHHHHHTTCE
T ss_pred             ccc-------------------HHHHHHHHHHHHhcCCC
Confidence            876                   33456788999999985

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0027  Score=50.97  Aligned_cols=36  Identities=19%  Similarity=0.303  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      +.+||.|+|| |.+|+.++..++..|++         |+++++++.
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~---------V~l~D~~~~   38 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHT---------VVLVDQTED   38 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCHH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCc---------EEEEECChH
Confidence            3478999997 99999999999999999         999998765

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.93  E-value=0.0043  Score=47.60  Aligned_cols=63  Identities=11%  Similarity=0.075  Sum_probs=42.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccccccc-ccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHMMEDM-FCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~~~~~-~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      |||.++|+ |.+|+++++.|++.| ++         |.+.+|++++...... .++... -|   .+    .+.++|+||
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~---------i~v~~r~~~~~~~l~~~~~~~~~-~~---~~----~v~~~Div~   62 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYR---------IYIANRGAEKRERLEKELGVETS-AT---LP----ELHSDDVLI   62 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCE---------EEEECSSHHHHHHHHHHTCCEEE-SS---CC----CCCTTSEEE
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCc---------EEEEeCChhHHHHhhhhcccccc-cc---cc----cccccceEE
Confidence            68999995 999999999999887 77         9999998764433221 222222 11   11    145688888


Q ss_pred             Ecc
Q 044498          102 NLA  104 (366)
Q Consensus       102 ~~a  104 (366)
                      -+.
T Consensus        63 lav   65 (152)
T d1yqga2          63 LAV   65 (152)
T ss_dssp             ECS
T ss_pred             Eec
Confidence            553

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.78  E-value=0.038  Score=39.91  Aligned_cols=82  Identities=16%  Similarity=0.260  Sum_probs=57.4

Q ss_pred             CeEEEEcCC---CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           24 LRISSIGVG---GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        24 ~~vlItGat---G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ++|.|+|+|   +-.|..+++.|++.|++         |+.+......            ...+.-...+.++-..+|.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~---------V~pVnP~~~~------------i~G~~~y~sl~~lp~~~D~v   60 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFE---------VLPVNPNYDE------------IEGLKCYRSVRELPKDVDVI   60 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCE---------EEEECTTCSE------------ETTEECBSSGGGSCTTCCEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCE---------EEEEcccccc------------ccCccccccchhccccceEE
Confidence            579999988   77999999999999999         9988533211            01122223344444578988


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      +-+..                   ...+..+++.+.+.+++  .+++
T Consensus        61 vi~vp-------------------~~~~~~~l~~~~~~g~k--~v~~   86 (116)
T d1y81a1          61 VFVVP-------------------PKVGLQVAKEAVEAGFK--KLWF   86 (116)
T ss_dssp             EECSC-------------------HHHHHHHHHHHHHTTCC--EEEE
T ss_pred             EEEeC-------------------HHHHHHHHHHHHhcCCc--eEEe
Confidence            86655                   45566788888899997  5554

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.75  E-value=0.033  Score=41.66  Aligned_cols=84  Identities=11%  Similarity=0.187  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCC---CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVG---GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGat---G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ..++|.|+||+   +-.|..+++.|.+.|++         |+.+......            ...+.-...+.++-..+|
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~---------v~pVnP~~~~------------i~G~~~~~sl~dlp~~iD   76 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYD---------VYPVNPKYEE------------VLGRKCYPSVLDIPDKIE   76 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCE---------EEEECTTCSE------------ETTEECBSSGGGCSSCCS
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCE---------EEEECCcccc------------cCCCcccccccccCccce
Confidence            45789999998   78999999999999999         9988643211            011111233444445789


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      .++-+..                   ......+++.+.+.+++  .+++
T Consensus        77 ~v~i~vp-------------------~~~~~~~~~e~~~~g~k--~v~~  104 (139)
T d2d59a1          77 VVDLFVK-------------------PKLTMEYVEQAIKKGAK--VVWF  104 (139)
T ss_dssp             EEEECSC-------------------HHHHHHHHHHHHHHTCS--EEEE
T ss_pred             EEEEEeC-------------------HHHHHHHHHHHHHhCCC--EEEE
Confidence            9886655                   45567788888888987  5554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.74  E-value=0.0086  Score=46.97  Aligned_cols=75  Identities=15%  Similarity=0.056  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH---hhh--c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL---RMT--S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~---~~~--~   95 (366)
                      .+.+|+|+|+ |-+|...+..+...|. +         |+++++++.+.......+...+...-...+.+.   +..  .
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~---------Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAAR---------IIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCce---------EEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcC
Confidence            5678999999 5589999999998875 6         889988887665554445454443322222222   222  3


Q ss_pred             CCCEEEEcccc
Q 044498           96 GVDNMSNLAAD  106 (366)
Q Consensus        96 ~~d~vi~~a~~  106 (366)
                      ++|++|.+.|.
T Consensus        98 G~D~vid~~G~  108 (176)
T d2jhfa2          98 GVDFSFEVIGR  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEecCCc
Confidence            79999999883

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.72  E-value=0.041  Score=37.64  Aligned_cols=84  Identities=21%  Similarity=0.182  Sum_probs=56.1

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccc-ccccccceEEEccCCChhHHHhhhcCCCEEEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHM-MEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSN  102 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~-~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi~  102 (366)
                      |||.++|-.|-==+.|++.|.++|+.         |.+.|+...... .....++.+..+  .+.+.    ++++|.||.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~---------VsGSD~~~~~~t~~L~~~Gi~i~~g--h~~~~----i~~~d~vV~   66 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGND---------VYGSNIEETERTAYLRKLGIPIFVP--HSADN----WYDPDLVIK   66 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE---------EEEECSSCCHHHHHHHHTTCCEESS--CCTTS----CCCCSEEEE
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCe---------EEEEeCCCChhHHHHHHCCCeEEee--ecccc----cCCCCEEEE
Confidence            78999986554444788889999999         999998764322 234456666554  22222    467999998


Q ss_pred             cccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498          103 LAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus       103 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      ..++..      .++             -+.+|++.+++
T Consensus        67 SsAI~~------~np-------------el~~A~~~gIp   86 (89)
T d1j6ua1          67 TPAVRD------DNP-------------EIVRARMERVP   86 (89)
T ss_dssp             CTTCCT------TCH-------------HHHHHHHTTCC
T ss_pred             ecCcCC------CCH-------------HHHHHHHcCCC
Confidence            888532      222             46677788775

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.63  E-value=0.012  Score=46.52  Aligned_cols=62  Identities=10%  Similarity=0.015  Sum_probs=47.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|.|+| .|-||+.+++.|...|.+         |+++++.+.....             .-.+.++++++.+|+|+
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~---------v~~~d~~~~~~~~-------------~~~~~l~ell~~sDiv~   97 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQ---------VRGFSRTPKEGPW-------------RFTNSLEEALREARAAV   97 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCE---------EEEECSSCCCSSS-------------CCBSCSHHHHTTCSEEE
T ss_pred             cCceEEEec-cccccccceeeeeccccc---------cccccccccccce-------------eeeechhhhhhccchhh
Confidence            678999999 599999999999999999         9999987543211             11124667888999999


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+...
T Consensus        98 ~~~pl  102 (181)
T d1qp8a1          98 CALPL  102 (181)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            77664

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.61  E-value=0.0063  Score=50.39  Aligned_cols=38  Identities=16%  Similarity=0.090  Sum_probs=33.9

Q ss_pred             CCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           19 WPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        19 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      ||...+||+|+|| |..|...+..|.++|++         |++++|..
T Consensus         2 ~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~---------V~vier~~   39 (268)
T d1c0pa1           2 MMHSQKRVVVLGS-GVIGLSSALILARKGYS---------VHILARDL   39 (268)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSC
T ss_pred             CCCCCCcEEEECc-cHHHHHHHHHHHHCCCC---------EEEEeCCC
Confidence            5667789999996 99999999999999999         99999754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0045  Score=47.78  Aligned_cols=74  Identities=11%  Similarity=-0.012  Sum_probs=55.3

Q ss_pred             cCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh
Q 044498           15 RESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        15 ~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +....+...+++.|+| .|.||+.+++.|...|.+         |++++..+.+..+....++...        .+.+++
T Consensus        16 r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~---------V~v~e~dp~~al~A~~dG~~v~--------~~~~a~   77 (163)
T d1li4a1          16 RATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGAR---------VIITEIDPINALQAAMEGYEVT--------TMDEAC   77 (163)
T ss_dssp             HHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTCEEC--------CHHHHT
T ss_pred             HHhCceecCCEEEEec-cccccHHHHHHHHhCCCe---------eEeeecccchhHHhhcCceEee--------ehhhhh
Confidence            3344455788999999 899999999999999999         9999988766555544333322        255667


Q ss_pred             cCCCEEEEcccc
Q 044498           95 SGVDNMSNLAAD  106 (366)
Q Consensus        95 ~~~d~vi~~a~~  106 (366)
                      ...|+||-+.|.
T Consensus        78 ~~adivvtaTGn   89 (163)
T d1li4a1          78 QEGNIFVTTTGC   89 (163)
T ss_dssp             TTCSEEEECSSC
T ss_pred             hhccEEEecCCC
Confidence            788999877773

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.067  Score=44.10  Aligned_cols=104  Identities=10%  Similarity=-0.048  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-------------------------cccc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-------------------------DMFC   76 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-------------------------~~~~   76 (366)
                      +..+|+|+| .|-+|++++..|...|...        ++++|...-.....                         ....
T Consensus        29 ~~~~VliiG-~GglGs~va~~La~~Gvg~--------i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~   99 (247)
T d1jw9b_          29 KDSRVLIVG-LGGLGCAASQYLASAGVGN--------LTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH   99 (247)
T ss_dssp             HHCEEEEEC-CSHHHHHHHHHHHHHTCSE--------EEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCe--------EEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcc
Confidence            456899999 5889999999999999741        77777432211100                         1112


Q ss_pred             ceEEEccCC-ChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEecccccC
Q 044498           77 HEFHLVDLR-VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP  155 (366)
Q Consensus        77 v~~~~~D~~-~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vyg  155 (366)
                      +.+...+.. ........+...|++|.+..                  |......+-+++.+++++   +|+.+....+|
T Consensus       100 ~~i~~~~~~~~~~~~~~~~~~~divid~~d------------------~~~~~~~in~~~~~~~ip---~i~g~~~~~~g  158 (247)
T d1jw9b_         100 IAITPVNALLDDAELAALIAEHDLVLDCTD------------------NVAVRNQLNAGCFAAKVP---LVSGAAIRMEG  158 (247)
T ss_dssp             SEEEEECSCCCHHHHHHHHHTSSEEEECCS------------------SHHHHHHHHHHHHHHTCC---EEEEEEEBTEE
T ss_pred             cchhhhhhhhhhccccccccccceeeeccc------------------hhhhhhhHHHHHHHhCCC---ccccccccccc
Confidence            233333321 23445555677888886654                  344555677788888885   88766554444

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.51  E-value=0.0075  Score=47.94  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .+||.|+|| |.+|+.++..++..|++         |++++++++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~---------V~l~D~~~~   38 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTP---------ILMKDINEH   38 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCC---------EEEECSSHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCe---------EEEEECCHH
Confidence            468999997 99999999999999999         999998764

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.47  E-value=0.014  Score=45.56  Aligned_cols=64  Identities=8%  Similarity=0.106  Sum_probs=40.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc-CCCCCCCCCccEEEEEe-CCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE-RHYSTSIPNALYIIASD-WNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~-g~~~~~~~~~~~V~~~~-r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      +++||.|.| +|++|+.+++.|.+. +.+         ++++. ++..... ..    ....     ..++....+++|+
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~e---------lvav~~~~~~~~~-~~----~~~~-----~~~~~~~~~~~D~   61 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMD---------LVGIFSRRATLDT-KT----PVFD-----VADVDKHADDVDV   61 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEE---------EEEEEESSSCCSS-SS----CEEE-----GGGGGGTTTTCSE
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcE---------EEEEEeccccccc-cc----cccc-----chhhhhhccccce
Confidence            457899999 699999999988874 455         66554 4432211 11    2211     1223344578999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      |+.++.
T Consensus        62 Vvi~tp   67 (170)
T d1f06a1          62 LFLCMG   67 (170)
T ss_dssp             EEECSC
T ss_pred             EEEeCC
Confidence            998776

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.46  E-value=0.011  Score=43.03  Aligned_cols=36  Identities=11%  Similarity=0.082  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++|+|+|| |++|..++..|.+.|.+         |+++.|...
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~---------Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTK---------VTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccE---------EEEEEecce
Confidence            3478999996 99999999999999999         999987654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.42  E-value=0.013  Score=45.92  Aligned_cols=76  Identities=17%  Similarity=0.091  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh---hHHHhhh--cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM---DNCLRMT--SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~---~~l~~~~--~~   96 (366)
                      .+.+|+|+|+ |-||...+..+...|...        |++.+.++.+.......+...+.-.....   ....+..  .+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~--------Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G   98 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASR--------IIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGG   98 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSE--------EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSC
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCce--------eeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCC
Confidence            5678999985 999999999999999741        77777776665444444544443222211   2222222  37


Q ss_pred             CCEEEEcccc
Q 044498           97 VDNMSNLAAD  106 (366)
Q Consensus        97 ~d~vi~~a~~  106 (366)
                      +|++|.|+|.
T Consensus        99 ~d~vie~~G~  108 (174)
T d1e3ia2          99 VDYSLDCAGT  108 (174)
T ss_dssp             BSEEEESSCC
T ss_pred             CcEEEEeccc
Confidence            9999999983

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.047  Score=48.98  Aligned_cols=34  Identities=18%  Similarity=0.249  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN   65 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~   65 (366)
                      ..||||+|+ |.+|+++++.|...|...        ++++|..
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~--------i~lvD~D   70 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQ--------IHVIDMD   70 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCC--------EEEECCC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCe--------EEEEECC
Confidence            468999997 669999999999999731        8888753

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.35  E-value=0.0087  Score=47.09  Aligned_cols=32  Identities=13%  Similarity=0.161  Sum_probs=26.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDW   64 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r   64 (366)
                      |.||.|-| .|.||+.+++.|.+++ .+         |+++..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~die---------vVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMK---------LVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEE---------EEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCE---------EEEEEC
Confidence            56899999 7999999999999864 56         777653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.31  E-value=0.011  Score=43.39  Aligned_cols=36  Identities=14%  Similarity=0.156  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++|+|+|| |++|..++..|.++|.+         |+.+.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~---------Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVH---------VSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccce---------EEEEeeccc
Confidence            4578999995 99999999999999999         999987654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.30  E-value=0.012  Score=45.90  Aligned_cols=75  Identities=16%  Similarity=0.078  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh-----cC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT-----SG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~-----~~   96 (366)
                      ...+|+|.|+ |.+|...++.+...|..+        |++.++++.+.......+...+.-...+.+.+.+.+     .+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~--------vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASR--------IIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSE--------EEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCc--------eEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCC
Confidence            4578999998 568999999888899651        667766665544344444454432222222222222     36


Q ss_pred             CCEEEEccc
Q 044498           97 VDNMSNLAA  105 (366)
Q Consensus        97 ~d~vi~~a~  105 (366)
                      +|+||.+.|
T Consensus        99 ~D~vid~~G  107 (176)
T d2fzwa2          99 VDYSFECIG  107 (176)
T ss_dssp             BSEEEECSC
T ss_pred             CcEeeecCC
Confidence            999999988

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.0042  Score=48.69  Aligned_cols=72  Identities=14%  Similarity=0.063  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc---ccceEEEccCCChhHHHhhhcCC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM---FCHEFHLVDLRVMDNCLRMTSGV   97 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~---~~v~~~~~D~~~~~~l~~~~~~~   97 (366)
                      .++++|||.|+ |..+++++..|.+.|.+         |+++.|+..+......   ........+..+.     ...++
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~---------i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~   80 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCA---------VTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEF   80 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceE---------EEeccchHHHHHHHHHHHhhcccccccccccc-----ccccc
Confidence            36789999996 88899999999999988         9999998764332211   0012222232221     13578


Q ss_pred             CEEEEccccc
Q 044498           98 DNMSNLAADM  107 (366)
Q Consensus        98 d~vi~~a~~~  107 (366)
                      |+|||+....
T Consensus        81 dliIN~Tp~G   90 (170)
T d1nyta1          81 DLIINATSSG   90 (170)
T ss_dssp             SEEEECCSCG
T ss_pred             ceeecccccC
Confidence            9999997743

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.29  E-value=0.012  Score=43.08  Aligned_cols=36  Identities=14%  Similarity=0.182  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++++|+|| |+||..++..|.+.|.+         |+++.+.+.
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~---------Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSK---------VTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcc---------eeEEEeccc
Confidence            3479999995 99999999999999999         999987654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.01  Score=39.54  Aligned_cols=60  Identities=5%  Similarity=0.005  Sum_probs=43.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC--hhHHHhhh
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV--MDNCLRMT   94 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~--~~~l~~~~   94 (366)
                      |++|.|.| +|.+|+-++..-.+.|++         |.+++-..+.......  ..++.+++.+  ...+.+.+
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~---------v~vldp~~~~pa~~~a--~dvIT~e~E~~~~~~l~~~l   62 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIA---------VWPVGLDAEPAAVPFQ--QSVITAEIERWPETALTRQL   62 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEE---------EEEECTTSCGGGSCGG--GSEEEESSSCCCCCHHHHHH
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCE---------EEEEcCCCCCcccccc--cceEEEeeccCChHHHHHHH
Confidence            57899999 599999999999999999         9999876554332222  2677777665  23454444

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.26  E-value=0.014  Score=42.78  Aligned_cols=34  Identities=9%  Similarity=0.001  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWN   65 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~   65 (366)
                      ..++++|+|| |+||..++..|.+.|.+         |+++.|+
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~---------Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLD---------VTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCC---------EEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCe---------EEEEEec
Confidence            3468999996 99999999999999999         9999764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.24  E-value=0.014  Score=42.59  Aligned_cols=36  Identities=11%  Similarity=0.062  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++++|+|| |+||..++..|.+.|.+         |+++.+...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~---------Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAE---------VTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCc---------eEEEEeecc
Confidence            4578999995 99999999999999999         999987654

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.24  E-value=0.015  Score=45.57  Aligned_cols=77  Identities=18%  Similarity=0.117  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCC----------------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLR----------------   85 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~----------------   85 (366)
                      ..-+|+|+|| |..|.+-++.....|.+         |.++|.+..........+-.++..+..                
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~---------V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s   97 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAV---------VMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMG   97 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSCSTTHHHHHHTTCEECCC-------------------
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCE---------EEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcC
Confidence            4568999996 99999999999999999         999998876544443333344433221                


Q ss_pred             ------ChhHHHhhhcCCCEEEEcccccC
Q 044498           86 ------VMDNCLRMTSGVDNMSNLAADMG  108 (366)
Q Consensus        86 ------~~~~l~~~~~~~d~vi~~a~~~~  108 (366)
                            +.+.+.+.+.++|+||-.+-..+
T Consensus        98 ~~~~~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1          98 EEFRKKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             ----CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHHHHHhhhhheeeeecCC
Confidence                  23446666789999998877654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.23  E-value=0.011  Score=43.06  Aligned_cols=35  Identities=14%  Similarity=0.180  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .++|+|+|| |++|..++..|.+.|.+         |+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~---------Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGID---------SYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCE---------EEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhcccc---------ceeeehhcc
Confidence            578999996 99999999999999999         999987653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.11  E-value=0.0099  Score=47.62  Aligned_cols=65  Identities=15%  Similarity=0.135  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|.|+| .|.||+.+++.|..-|.+         |+++++.........          ......+.++++.+|+|+
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~---------V~~~d~~~~~~~~~~----------~~~~~~l~~~l~~sDii~  101 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAK---------VITYDIFRNPELEKK----------GYYVDSLDDLYKQADVIS  101 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSSCCHHHHHT----------TCBCSCHHHHHHHCSEEE
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhccc---------ccccCcccccccccc----------eeeecccccccccccccc
Confidence            678999999 699999999999989999         999987654322111          011234667778889888


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+...
T Consensus       102 ~~~pl  106 (197)
T d1j4aa1         102 LHVPD  106 (197)
T ss_dssp             ECSCC
T ss_pred             ccCCc
Confidence            77664

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.07  E-value=0.013  Score=45.12  Aligned_cols=73  Identities=11%  Similarity=0.133  Sum_probs=40.9

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEE-eCCCcccc--ccccccceEEEccCCChhHHHhh-
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIAS-DWNKNEHM--MEDMFCHEFHLVDLRVMDNCLRM-   93 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~-~r~~~~~~--~~~~~~v~~~~~D~~~~~~l~~~-   93 (366)
                      |.+++||.|+| +|.||+.+...+++.  ..+         +.++ +|+.....  .....++.+...   +.+++.+. 
T Consensus         1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~e---------l~avas~~~~~~~~~~a~~~~i~~~~~---~~d~l~~~~   67 (157)
T d1nvmb1           1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLE---------MGAMVGIDAASDGLARAQRMGVTTTYA---GVEGLIKLP   67 (157)
T ss_dssp             CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEE---------EEEEECSCTTCHHHHHHHHTTCCEESS---HHHHHHHSG
T ss_pred             CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcce---------EEEEEecchhccchhhhhhcCCccccc---ceeeeeecc
Confidence            44668999999 899999765445543  234         6655 45543221  112223333332   23344433 


Q ss_pred             -hcCCCEEEEccc
Q 044498           94 -TSGVDNMSNLAA  105 (366)
Q Consensus        94 -~~~~d~vi~~a~  105 (366)
                       +.++|+|+.+..
T Consensus        68 ~~~~iDiVf~ATp   80 (157)
T d1nvmb1          68 EFADIDFVFDATS   80 (157)
T ss_dssp             GGGGEEEEEECSC
T ss_pred             cccccCEEEEcCC
Confidence             347899997644

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.04  E-value=0.016  Score=41.92  Aligned_cols=35  Identities=11%  Similarity=0.173  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .++|+|+|| |++|..++..|.+.|.+         |+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~---------Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAK---------THLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccE---------EEEEeecch
Confidence            478999995 99999999999999999         999988654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.00  E-value=0.0069  Score=47.66  Aligned_cols=36  Identities=11%  Similarity=0.254  Sum_probs=32.5

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH   69 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~   69 (366)
                      |||.|+| .|.+|..+++.|++.|++         |.+++|++.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~---------V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFK---------VAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCC---------EEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCe---------EEEEECCHHHH
Confidence            6899999 799999999999999999         99999976643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.97  E-value=0.015  Score=42.59  Aligned_cols=35  Identities=17%  Similarity=0.197  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      +.++|+|.|| |++|..++..|.+.|.+         |+++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~---------Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKK---------VTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceE---------EEEEEecC
Confidence            4578999995 99999999999999999         99998764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.96  E-value=0.013  Score=45.37  Aligned_cols=73  Identities=14%  Similarity=0.098  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhH---HHhhhcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDN---CLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~---l~~~~~~~d   98 (366)
                      ...+|+|.|+ |-+|...+..+...|.+         |+++++++.+.......+...+ .|..+.+.   +.+...+.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~---------Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~g~~   95 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLH---------VAAIDIDDAKLELARKLGASLT-VNARQEDPVEAIQRDIGGAH   95 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCc---------cceecchhhHHHhhhccCcccc-ccccchhHHHHHHHhhcCCc
Confidence            4678999986 99999999888888999         9999988765443333344332 23333332   333334666


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      .+|.+++
T Consensus        96 ~~i~~~~  102 (166)
T d1llua2          96 GVLVTAV  102 (166)
T ss_dssp             EEEECCS
T ss_pred             ccccccc
Confidence            6666655

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=94.94  E-value=0.019  Score=44.56  Aligned_cols=67  Identities=9%  Similarity=0.098  Sum_probs=45.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccc-cccceEEEccCCChhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMED-MFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~-~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ++++|+|+|+ |..|++++..|.+.|. +         |.+++|+.++..... ..+...+  +  ..     ...++|+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~---------I~I~nR~~~ka~~L~~~~~~~~~--~--~~-----~~~~~Dl   76 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEK---------LKIYARNVKTGQYLAALYGYAYI--N--SL-----ENQQADI   76 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCC---------EEEECSCHHHHHHHHHHHTCEEE--S--CC-----TTCCCSE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCE---------EEEecccHHHHHHHHHhhhhhhh--h--cc-----cccchhh
Confidence            4678999996 9999999999999996 5         889988866433221 1111211  1  10     1246899


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      |||+....
T Consensus        77 iINaTpiG   84 (167)
T d1npya1          77 LVNVTSIG   84 (167)
T ss_dssp             EEECSSTT
T ss_pred             heeccccC
Confidence            99987743

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.92  E-value=0.02  Score=45.69  Aligned_cols=74  Identities=12%  Similarity=-0.036  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCChh---HHHhhhc--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMD---NCLRMTS--   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~---~l~~~~~--   95 (366)
                      .+.+|||+|+ |-+|...+..+...|. .         |+++++++.+.......+...+. +..+.+   .+.++..  
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~---------Vi~~d~~~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAV---------VIVGDLNPARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEEESCHHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccc---------eeeecccchhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCC
Confidence            5678999985 9999888887777776 5         88888876654444445556554 333322   3333333  


Q ss_pred             CCCEEEEcccc
Q 044498           96 GVDNMSNLAAD  106 (366)
Q Consensus        96 ~~d~vi~~a~~  106 (366)
                      ++|++|.+.|.
T Consensus        94 g~D~vid~vG~  104 (195)
T d1kola2          94 EVDCAVDAVGF  104 (195)
T ss_dssp             CEEEEEECCCT
T ss_pred             CcEEEEECccc
Confidence            68999999884

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.87  E-value=0.025  Score=44.31  Aligned_cols=75  Identities=15%  Similarity=0.066  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCC---hhHHHhhh--c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV---MDNCLRMT--S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~---~~~l~~~~--~   95 (366)
                      ....|+|+|+ |-+|...+..+...|. +         |+++++++.+.......+...+.-....   .+.+.+..  .
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~---------Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~   98 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASR---------IIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGN   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCce---------EEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccc
Confidence            5568999985 9999999999999984 6         9999988876554444455544321111   22233333  3


Q ss_pred             CCCEEEEcccc
Q 044498           96 GVDNMSNLAAD  106 (366)
Q Consensus        96 ~~d~vi~~a~~  106 (366)
                      ++|++|.+.+.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            79999999884

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.86  E-value=0.018  Score=41.60  Aligned_cols=36  Identities=8%  Similarity=0.115  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++++|+|| |++|..++..|.+.|.+         |+++.+.+.
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~---------Vtlve~~~~   55 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQ---------VSVVEARER   55 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCE---------EEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccc---------eEEEeeecc
Confidence            3478999995 99999999999999999         999987643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.69  E-value=0.027  Score=44.61  Aligned_cols=65  Identities=14%  Similarity=0.089  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|.|.| .|.||+.+++.|...|.+         |++.++........      ...     .+.+.++++.+|+|+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~---------v~~~d~~~~~~~~~------~~~-----~~~l~ell~~sDii~  101 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMY---------VYFYDIENKLPLGN------ATQ-----VQHLSDLLNMSDVVS  101 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSSCCCCCTT------CEE-----CSCHHHHHHHCSEEE
T ss_pred             cceEEEEee-cccchhhhhhhcccccce---------Eeeccccccchhhh------hhh-----hhhHHHHHhhcccee
Confidence            567899998 799999999999999999         99998764432211      111     134667778889888


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      -+....
T Consensus       102 i~~plt  107 (188)
T d1sc6a1         102 LHVPEN  107 (188)
T ss_dssp             ECCCSS
T ss_pred             ecccCC
Confidence            777644

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.022  Score=41.77  Aligned_cols=35  Identities=17%  Similarity=0.131  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .++++|+|| |+||..++..|.+.|.+         |+++.|...
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~---------Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSK---------TSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcE---------EEEEeeccc
Confidence            478999996 99999999999999999         999988653

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.66  E-value=0.056  Score=41.99  Aligned_cols=75  Identities=12%  Similarity=0.084  Sum_probs=44.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCcccc--ccccccceEEEccCCCh-----------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKNEHM--MEDMFCHEFHLVDLRVM-----------   87 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~~~~--~~~~~~v~~~~~D~~~~-----------   87 (366)
                      |++||.|-| .|-||+.+++.|+++. .+         |.++.-..+...  .....++..+..+-...           
T Consensus         1 M~irIaING-fGRIGR~v~Ral~~~~die---------iVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (172)
T d2czca2           1 MKVKVGVNG-YGTIGKRVAYAVTKQDDME---------LIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVA   70 (172)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCTTEE---------EEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCS
T ss_pred             CcEEEEEEC-CCHHHHHHHHHHHhCCCce---------EEEEecCCChHHHHHhhhcCceeecccccceeeecccCcccc
Confidence            357999999 6999999999998764 45         666653222111  11111223333322221           


Q ss_pred             hHHHhhhcCCCEEEEcccc
Q 044498           88 DNCLRMTSGVDNMSNLAAD  106 (366)
Q Consensus        88 ~~l~~~~~~~d~vi~~a~~  106 (366)
                      ..+..++.++|+||-|.|.
T Consensus        71 ~~~~~~~~~vDvViEcTG~   89 (172)
T d2czca2          71 GTLNDLLEKVDIIVDATPG   89 (172)
T ss_dssp             CBHHHHHTTCSEEEECCST
T ss_pred             chhhhhhccCCEEEECCCC
Confidence            1233445689999999994

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.61  E-value=0.021  Score=45.68  Aligned_cols=64  Identities=17%  Similarity=0.110  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|.|+| .|-||+.+++.|..-|.+         |+++++.........   +     +   ...+.++++.+|+|+
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~---------v~~~d~~~~~~~~~~---~-----~---~~~l~~l~~~~D~v~  102 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAK---------VIAYDPYPMKGDHPD---F-----D---YVSLEDLFKQSDVID  102 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSSCCSSCCTT---C-----E---ECCHHHHHHHCSEEE
T ss_pred             cceeeeeee-ccccccccccccccccee---------eeccCCccchhhhcc---h-----h---HHHHHHHHHhcccce
Confidence            567899999 699999999999999999         999997654322111   1     1   123666777899888


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+...
T Consensus       103 ~~~pl  107 (199)
T d1dxya1         103 LHVPG  107 (199)
T ss_dssp             ECCCC
T ss_pred             eeecc
Confidence            77664

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.51  E-value=0.025  Score=42.02  Aligned_cols=36  Identities=19%  Similarity=0.206  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++|+|+|| |++|..++..|.+.|.+         |+++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~---------Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMH---------VTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcc---------eeeeeeccc
Confidence            4579999995 99999999999999999         999987654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.45  E-value=0.019  Score=41.94  Aligned_cols=34  Identities=21%  Similarity=0.135  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      .++|+|.|| |++|..++..|.+.|.+         |+++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~---------Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYH---------VKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCE---------EEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccce---------EEEEeccc
Confidence            368999996 99999999999999999         99998764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.36  E-value=0.085  Score=38.58  Aligned_cols=92  Identities=9%  Similarity=0.025  Sum_probs=55.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHH-cCCCCCCCCCccEEEEE-eCCCccccccccccceEEEccCCChhHHHhhhc-CCCEE
Q 044498           24 LRISSIGVGGFIPSNIARRLKS-ERHYSTSIPNALYIIAS-DWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-GVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~-~g~~~~~~~~~~~V~~~-~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-~~d~v  100 (366)
                      -+|+|.|| |.+|+.|++.+.. .+++         +++. +-.+.. ....-.++.++.     .+.+.+..+ .++++
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~---------iv~fiDdd~~k-~G~~I~Gi~V~~-----~~~l~~~~~~~i~ia   67 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFE---------LRGFFDVDPEK-VGRPVRGGVIEH-----VDLLPQRVPGRIEIA   67 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEE---------EEEEEESCTTT-TTCEETTEEEEE-----GGGHHHHSTTTCCEE
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcE---------EEEEEeCchHh-cCCEECCEEEec-----HHHHHHHHhhcccEE
Confidence            38999995 9999999987653 3555         6665 433322 222222344442     334555443 46665


Q ss_pred             EEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccc
Q 044498          101 SNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC  152 (366)
Q Consensus       101 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~  152 (366)
                      +-+..                   ....+.+++.+.+.+++  .+.-++...
T Consensus        68 i~~i~-------------------~~~~~~I~d~l~~~gIk--~I~~f~~~~   98 (126)
T d2dt5a2          68 LLTVP-------------------REAAQKAADLLVAAGIK--GILNFAPVV   98 (126)
T ss_dssp             EECSC-------------------HHHHHHHHHHHHHHTCC--EEEECSSSC
T ss_pred             EEeCC-------------------HHHHHHHHHHHHHcCCC--EEeecCcee
Confidence            54443                   23445688888889998  777766543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.35  E-value=0.02  Score=45.62  Aligned_cols=68  Identities=13%  Similarity=0.046  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      .+++|.|+| .|-||+.+++.|...|.+         |.+.++......... .       .+.....+.++++.+|+|+
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~---------v~~~d~~~~~~~~~~-~-------~~~~~~~l~~ll~~sD~i~  109 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFN---------VLFYDPYLSDGVERA-L-------GLQRVSTLQDLLFHSDCVT  109 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCE---------EEEECTTSCTTHHHH-H-------TCEECSSHHHHHHHCSEEE
T ss_pred             eCceEEEec-cccccccceeeeeccccc---------eeeccCcccccchhh-h-------ccccccchhhccccCCEEE
Confidence            678999999 699999999999999999         999987654322111 0       1111234566677788777


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      .+....
T Consensus       110 ~~~plt  115 (193)
T d1mx3a1         110 LHCGLN  115 (193)
T ss_dssp             ECCCCC
T ss_pred             Eeeccc
Confidence            666543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.32  E-value=0.028  Score=41.27  Aligned_cols=36  Identities=11%  Similarity=0.044  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++++|+|| |+||..++..|.+.|.+         |+++.+.+.
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~---------Vtive~~~~   60 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSR---------LDVVEMMDG   60 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCE---------EEEECSSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCE---------EEEEEeecc
Confidence            3578999995 99999999999999999         999987653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.29  E-value=0.023  Score=41.59  Aligned_cols=36  Identities=11%  Similarity=0.194  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++++|+|| |+||..++..|.+.|.+         |+++.|.+.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~---------Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSE---------VTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCE---------EEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCe---------EEEEEEccc
Confidence            3478999995 99999999999999999         999988764

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.23  E-value=0.036  Score=43.20  Aligned_cols=74  Identities=15%  Similarity=0.015  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEE-ccCCC--hhHHHhhh--c
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHL-VDLRV--MDNCLRMT--S   95 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~-~D~~~--~~~l~~~~--~   95 (366)
                      ...+|+|+|+ |-+|...+..+...|. +         |++++++..+.......+...+. ..-.|  .+......  .
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~---------Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~   96 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASR---------IIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNG   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSE---------EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCce---------eeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCC
Confidence            4568999996 9999999999999986 5         88888877665444444545443 22122  12222222  3


Q ss_pred             CCCEEEEccc
Q 044498           96 GVDNMSNLAA  105 (366)
Q Consensus        96 ~~d~vi~~a~  105 (366)
                      ++|++|.+++
T Consensus        97 G~d~vid~~g  106 (174)
T d1p0fa2          97 GVDYAVECAG  106 (174)
T ss_dssp             CBSEEEECSC
T ss_pred             CCcEEEEcCC
Confidence            6999999988

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.21  E-value=0.017  Score=44.18  Aligned_cols=75  Identities=9%  Similarity=0.003  Sum_probs=57.4

Q ss_pred             cCCCCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhh
Q 044498           15 RESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMT   94 (366)
Q Consensus        15 ~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~   94 (366)
                      +....|...++++|.| -|.+|+-++++|...|.+         |+++...+-..++....++++..        +.+++
T Consensus        15 r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~---------V~V~E~DPi~alqA~mdGf~v~~--------~~~a~   76 (163)
T d1v8ba1          15 RATDFLISGKIVVICG-YGDVGKGCASSMKGLGAR---------VYITEIDPICAIQAVMEGFNVVT--------LDEIV   76 (163)
T ss_dssp             HHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCE---------EEEECSCHHHHHHHHTTTCEECC--------HHHHT
T ss_pred             HHhCceecCCEEEEec-ccccchhHHHHHHhCCCE---------EEEEecCchhhHHHHhcCCccCc--------hhHcc
Confidence            4444566788999999 699999999999999999         99999887766655544444332        45677


Q ss_pred             cCCCEEEEccccc
Q 044498           95 SGVDNMSNLAADM  107 (366)
Q Consensus        95 ~~~d~vi~~a~~~  107 (366)
                      +..|++|-+.|..
T Consensus        77 ~~aDi~vTaTGn~   89 (163)
T d1v8ba1          77 DKGDFFITCTGNV   89 (163)
T ss_dssp             TTCSEEEECCSSS
T ss_pred             ccCcEEEEcCCCC
Confidence            8889999887743

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.17  E-value=0.038  Score=42.51  Aligned_cols=74  Identities=12%  Similarity=0.080  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCC--hhHHHhhhcCCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRV--MDNCLRMTSGVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~--~~~l~~~~~~~d~   99 (366)
                      ...+|+|.|+ |-||...+..+...|.+         |+++++++.+.......++..+.....+  .+.+.+...+.+.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~---------v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~   96 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLN---------VVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA   96 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCe---------EeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCce
Confidence            4568999975 89999999888888999         9999987766544444555655433332  2234444556677


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      +|.+++
T Consensus        97 ~v~~~~  102 (168)
T d1rjwa2          97 AVVTAV  102 (168)
T ss_dssp             EEESSC
T ss_pred             EEeecC
Confidence            776665

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.07  E-value=0.19  Score=36.00  Aligned_cols=74  Identities=9%  Similarity=0.083  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCC----------chhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVGG----------FIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGatG----------~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~   91 (366)
                      ..++|||+|+..          +-+.+.++.|.+.|++         ++.++.++..-...... ..-+-..-...+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~---------~IliN~NPeTVstd~d~-aD~lYfeplt~e~v~   72 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYE---------TIMVNCNPETVSTDYDT-SDRLYFEPVTLEDVL   72 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCE---------EEEECCCTTSSTTSTTS-SSEEECCCCSHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCe---------EEEEecChhhhhcChhh-cCceEEccCCHHHHH
Confidence            457899999743          7889999999999999         99998777643322111 123333334456677


Q ss_pred             hhhc--CCCEEEEccc
Q 044498           92 RMTS--GVDNMSNLAA  105 (366)
Q Consensus        92 ~~~~--~~d~vi~~a~  105 (366)
                      ++++  ++|.|+-..|
T Consensus        73 ~Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          73 EIVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHHCCSEEECSSS
T ss_pred             HHHHHhCCCEEEeehh
Confidence            7653  7888874443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.07  E-value=0.053  Score=42.77  Aligned_cols=74  Identities=8%  Similarity=-0.148  Sum_probs=46.1

Q ss_pred             CCeEEE-EcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccc----cccccceEEE-cc---CCChh-HHHh
Q 044498           23 KLRISS-IGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMM----EDMFCHEFHL-VD---LRVMD-NCLR   92 (366)
Q Consensus        23 ~~~vlI-tGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~----~~~~~v~~~~-~D---~~~~~-~l~~   92 (366)
                      ..+++| +||+|-+|...++-....|.+         |+++.+.......    ....+...+. .|   ..+.. .+.+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~---------vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~   99 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFN---------SISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKE   99 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCE---------EEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCe---------EEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHH
Confidence            456777 589999999999988888999         9988876553221    1223334332 22   11111 1222


Q ss_pred             hh----cCCCEEEEccc
Q 044498           93 MT----SGVDNMSNLAA  105 (366)
Q Consensus        93 ~~----~~~d~vi~~a~  105 (366)
                      ..    .++|+|+++.|
T Consensus       100 ~~~~~g~~vdvv~D~vg  116 (189)
T d1gu7a2         100 WIKQSGGEAKLALNCVG  116 (189)
T ss_dssp             HHHHHTCCEEEEEESSC
T ss_pred             HHhhccCCceEEEECCC
Confidence            22    36899999887

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.035  Score=51.40  Aligned_cols=104  Identities=11%  Similarity=0.016  Sum_probs=65.1

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-------------------------ccc--ccc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-------------------------MME--DMF   75 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-------------------------~~~--~~~   75 (366)
                      ..+|+|+|+ |-+|.++++-|...|...        ++++|...-..                         ...  +..
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~--------itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v   95 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGS--------FTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDV   95 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSE--------EEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCE--------EEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCC
Confidence            468999996 779999999999999641        77776532110                         000  011


Q ss_pred             cceEEEccCCCh-hHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEEEeccccc
Q 044498           76 CHEFHLVDLRVM-DNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIY  154 (366)
Q Consensus        76 ~v~~~~~D~~~~-~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS~~vy  154 (366)
                      .++.+..+..+. +.....+.++|+||.+..                  |......+-++|++++++   ||++++.+.|
T Consensus        96 ~i~~~~~~~~~~~~~~~~~~~~~dvVv~~~~------------------~~~~~~~l~~~c~~~~ip---~i~~~~~G~~  154 (529)
T d1yova1          96 SGSFVEESPENLLDNDPSFFCRFTVVVATQL------------------PESTSLRLADVLWNSQIP---LLICRTYGLV  154 (529)
T ss_dssp             BCCEESSCHHHHHHSCGGGGGGCSEEEEESC------------------CHHHHHHHHHHHHHHTCC---EEEEEEETTE
T ss_pred             cEEEEcCCchhhhhhHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCCC---EEEEeccCCE
Confidence            233343332221 111234567888885543                  355556788899999985   9999887777


Q ss_pred             CC
Q 044498          155 PE  156 (366)
Q Consensus       155 g~  156 (366)
                      |.
T Consensus       155 G~  156 (529)
T d1yova1         155 GY  156 (529)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=93.84  E-value=0.0056  Score=47.99  Aligned_cols=70  Identities=10%  Similarity=-0.020  Sum_probs=46.2

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccc-----cccceEEEccCCChhHHHhhhc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMED-----MFCHEFHLVDLRVMDNCLRMTS   95 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~-----~~~v~~~~~D~~~~~~l~~~~~   95 (366)
                      ..+++|+|.|+ |..|+.++..|.+.+.+         |+++.|+..+.....     ...+.....|  +     ..+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~---------i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~--~-----~~~~   78 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQN---------IVLANRTFSKTKELAERFQPYGNIQAVSMD--S-----IPLQ   78 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCE---------EEEEESSHHHHHHHHHHHGGGSCEEEEEGG--G-----CCCS
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCce---------eeeccchHHHHHHHHHHHhhccccchhhhc--c-----cccc
Confidence            36789999995 77899999999987767         999999865432211     1111222222  1     1246


Q ss_pred             CCCEEEEccccc
Q 044498           96 GVDNMSNLAADM  107 (366)
Q Consensus        96 ~~d~vi~~a~~~  107 (366)
                      .+|+|||+....
T Consensus        79 ~~diiIN~tp~g   90 (171)
T d1p77a1          79 TYDLVINATSAG   90 (171)
T ss_dssp             CCSEEEECCCC-
T ss_pred             ccceeeeccccc
Confidence            799999998743

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.064  Score=41.16  Aligned_cols=58  Identities=12%  Similarity=0.055  Sum_probs=44.9

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      ..+++|+|+|-+..+|+.|+..|.++|.+         |+.......                     .+....++.|+|
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gat---------Vt~~h~~t~---------------------~l~~~~~~ADiv   84 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCT---------TTVTHRFTK---------------------NLRHHVENADLL   84 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCE---------EEEECSSCS---------------------CHHHHHHHCSEE
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhcc---------ccccccccc---------------------hhHHHHhhhhHh
Confidence            36889999999999999999999999998         887753321                     234445678888


Q ss_pred             EEcccccC
Q 044498          101 SNLAADMG  108 (366)
Q Consensus       101 i~~a~~~~  108 (366)
                      |..+|..+
T Consensus        85 I~a~G~p~   92 (166)
T d1b0aa1          85 IVAVGKPG   92 (166)
T ss_dssp             EECSCCTT
T ss_pred             hhhccCcc
Confidence            88888543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.70  E-value=0.02  Score=45.62  Aligned_cols=33  Identities=18%  Similarity=0.317  Sum_probs=28.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      |||.|+| .||+|..++..| ++|++         |++++-++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~---------V~g~Din~~   33 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNE---------VTIVDILPS   33 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSE---------EEEECSCHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCc---------EEEEECCHH
Confidence            6899998 799999998644 67999         999997654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.48  E-value=0.12  Score=39.84  Aligned_cols=58  Identities=7%  Similarity=-0.012  Sum_probs=44.7

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCE
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDN   99 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~   99 (366)
                      ...+++|.|+|-+..+|+.|+..|.++|.+         |+.+......                     +.+..++.|+
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gat---------Vt~~~~~t~~---------------------l~~~~~~aDi   85 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNAT---------VTTCHSKTAH---------------------LDEEVNKGDI   85 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCE---------EEEECTTCSS---------------------HHHHHTTCSE
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCc---------eEEEeccccc---------------------HHHHHhhccc
Confidence            347899999999999999999999999998         8887643221                     3334567888


Q ss_pred             EEEccccc
Q 044498          100 MSNLAADM  107 (366)
Q Consensus       100 vi~~a~~~  107 (366)
                      +|..+|..
T Consensus        86 vi~a~G~~   93 (170)
T d1a4ia1          86 LVVATGQP   93 (170)
T ss_dssp             EEECCCCT
T ss_pred             hhhccccc
Confidence            88777754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.46  E-value=0.5  Score=34.16  Aligned_cols=74  Identities=12%  Similarity=0.149  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCC----------CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHH
Q 044498           22 GKLRISSIGVG----------GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCL   91 (366)
Q Consensus        22 ~~~~vlItGat----------G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~   91 (366)
                      ..+||||+|+.          -|-+.+.++.|.+.|++         ++.++.++..-...... ..-+-..-...+.+.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~---------~iliN~NP~TVstd~d~-aD~lYfePlt~e~v~   75 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYR---------VINVNSNPATIMTDPEM-ADATYIEPIHWEVVR   75 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCE---------EEEECSCTTCGGGCGGG-SSEEECSCCCHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCe---------EEEecCchHhhhcChhh-cceeeeecCCHHHHH
Confidence            45789999983          46789999999999999         99998877653322211 133444445567788


Q ss_pred             hhhc--CCCEEEEccc
Q 044498           92 RMTS--GVDNMSNLAA  105 (366)
Q Consensus        92 ~~~~--~~d~vi~~a~  105 (366)
                      ++++  ++|.|+-..|
T Consensus        76 ~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          76 KIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHCCSEEECSSS
T ss_pred             HHHHHhCcCCeEEEee
Confidence            7764  7999985444

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.45  E-value=0.047  Score=43.10  Aligned_cols=68  Identities=15%  Similarity=0.093  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|.|+| .|-||+.+++.|...|.+         |...++...........+       +.....+.++++.+|+|+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~---------v~~~d~~~~~~~~~~~~~-------~~~~~~l~~~l~~sD~v~  105 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVH---------LHYTDRHRLPESVEKELN-------LTWHATREDMYPVCDVVT  105 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCE---------EEEECSSCCCHHHHHHHT-------CEECSSHHHHGGGCSEEE
T ss_pred             cccceeecc-ccccchhhhhhhhccCce---------EEEEeecccccccccccc-------ccccCCHHHHHHhccchh
Confidence            567899999 699999999999999999         999998654322221111       111234555667777776


Q ss_pred             Ecccc
Q 044498          102 NLAAD  106 (366)
Q Consensus       102 ~~a~~  106 (366)
                      .+...
T Consensus       106 ~~~pl  110 (188)
T d2naca1         106 LNCPL  110 (188)
T ss_dssp             ECSCC
T ss_pred             hcccc
Confidence            55553

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.38  E-value=0.05  Score=39.38  Aligned_cols=36  Identities=3%  Similarity=-0.079  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++|+|+|| |++|..++..|.+.|.+         |+++.+.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~---------vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRR---------TVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchh---------heEeeccch
Confidence            3578999995 99999999999999999         999987653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.19  E-value=0.042  Score=43.88  Aligned_cols=67  Identities=13%  Similarity=0.086  Sum_probs=46.3

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhc-CCCE
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTS-GVDN   99 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~-~~d~   99 (366)
                      .+.++|+|-| .|.+|+++++.|.+.|.+         |++.+.+..........+.+.+     +.   .+++. .+|+
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gak---------vvv~d~d~~~~~~~~~~g~~~~-----~~---~~~~~~~~DI   86 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQ---------LLVADTDTERVAHAVALGHTAV-----AL---EDVLSTPCDV   86 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHTTCEEC-----CG---GGGGGCCCSE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCE---------EEEecchHHHHHHHHhhccccc-----Cc---ccccccccee
Confidence            4788999999 799999999999999999         9988765433222211222222     22   23444 7999


Q ss_pred             EEEccc
Q 044498          100 MSNLAA  105 (366)
Q Consensus       100 vi~~a~  105 (366)
                      ++-||.
T Consensus        87 ~iPcA~   92 (201)
T d1c1da1          87 FAPCAM   92 (201)
T ss_dssp             EEECSC
T ss_pred             eecccc
Confidence            998876

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.14  E-value=0.051  Score=41.14  Aligned_cols=38  Identities=16%  Similarity=0.198  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      |++|.|.|+||-||...++-+.+.-.       ++.|.+++-..+
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d-------~f~v~~Lsa~~N   38 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPE-------HFRVVALVAGKN   38 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTT-------TEEEEEEEESSC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCC-------CcEEEEEEecCc
Confidence            67899999999999999998876521       133888765444

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.14  E-value=0.043  Score=45.69  Aligned_cols=31  Identities=29%  Similarity=0.222  Sum_probs=28.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      |+|+|| |.+|..++.+|.++|++         |+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~---------V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKN---------TALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCC---------EEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCc---------EEEEeCCC
Confidence            999996 99999999999999999         99998754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.12  E-value=0.044  Score=43.06  Aligned_cols=36  Identities=17%  Similarity=0.036  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~   67 (366)
                      .++||+|+|| |..|...+..|.++|+ +         |+++.+...
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~---------V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSD---------ITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCC---------EEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCe---------EEEEEecCc
Confidence            4579999996 9999999999999997 7         888887654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.09  E-value=0.06  Score=41.64  Aligned_cols=75  Identities=15%  Similarity=0.178  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccce-EEEccCCChhHHHhhh--cCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVDLRVMDNCLRMT--SGVD   98 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~-~~~~D~~~~~~l~~~~--~~~d   98 (366)
                      ...+|+|.|+ |.+|...+..+...|...        |++.++++.+.......+.. ++..+-.+.+...+..  .++|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~--------vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d  102 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPAT--------VIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVN  102 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCE--------EEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcc--------cccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCce
Confidence            4568999985 999999999888888641        67777776543333333333 3333222223333332  2699


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +||.++|
T Consensus       103 ~vid~~g  109 (172)
T d1h2ba2         103 VAMDFVG  109 (172)
T ss_dssp             EEEESSC
T ss_pred             EEEEecC
Confidence            9999998

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.07  E-value=0.039  Score=43.43  Aligned_cols=67  Identities=16%  Similarity=0.097  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..+++.|+| .|.||+.+++.+..-|.+         |++.++...+..... .+++        ...+.++++.+|+|+
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~---------v~~~d~~~~~~~~~~-~~~~--------~~~l~ell~~sDiv~  103 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAY---------VVAYDPYVSPARAAQ-LGIE--------LLSLDDLLARADFIS  103 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCE---------EEEECTTSCHHHHHH-HTCE--------ECCHHHHHHHCSEEE
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccce---------EEeecCCCChhHHhh-cCce--------eccHHHHHhhCCEEE
Confidence            567899998 699999999999988999         999987654322211 1111        123566777888888


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      .+....
T Consensus       104 ~~~Plt  109 (184)
T d1ygya1         104 VHLPKT  109 (184)
T ss_dssp             ECCCCS
T ss_pred             EcCCCC
Confidence            776644

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.95  E-value=0.055  Score=42.84  Aligned_cols=69  Identities=17%  Similarity=0.056  Sum_probs=46.9

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCCEEE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMS  101 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d~vi  101 (366)
                      ..++|.|+| .|.||+.+++.|...|.+         |.++++...........  .     ....+.+.++++.+|+|+
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~---------v~~~d~~~~~~~~~~~~--~-----~~~~~~l~~ll~~sD~v~  108 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMD---------IDYFDTHRASSSDEASY--Q-----ATFHDSLDSLLSVSQFFS  108 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCE---------EEEECSSCCCHHHHHHH--T-----CEECSSHHHHHHHCSEEE
T ss_pred             cccceEEee-cccchHHHHHHHHhhccc---------cccccccccccchhhcc--c-----ccccCCHHHHHhhCCeEE
Confidence            568999999 699999999999989999         99998765432211110  0     111234666777788887


Q ss_pred             Eccccc
Q 044498          102 NLAADM  107 (366)
Q Consensus       102 ~~a~~~  107 (366)
                      .+....
T Consensus       109 l~~plt  114 (191)
T d1gdha1         109 LNAPST  114 (191)
T ss_dssp             ECCCCC
T ss_pred             ecCCCC
Confidence            666543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.91  E-value=0.048  Score=46.87  Aligned_cols=36  Identities=25%  Similarity=0.371  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      +++||+|+|| |.-|...|..|.++|++         |+++.+...
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~---------V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQ---------VHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCE---------EEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCC---------EEEEECCCC
Confidence            3689999995 99999999999999999         999986654

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.90  E-value=0.047  Score=47.16  Aligned_cols=38  Identities=18%  Similarity=0.143  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCCc
Q 044498           20 PSGKLRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        20 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~~   67 (366)
                      |..|+||+|+|| |.-|...+..|+++|  ++         |+++.+...
T Consensus         1 m~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~---------v~vfEk~~~   40 (335)
T d2gv8a1           1 LPTIRKIAIIGA-GPSGLVTAKALLAEKAFDQ---------VTLFERRGS   40 (335)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHTTTCCSE---------EEEECSSSS
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHhCCCCC---------EEEEECCCC
Confidence            557889999996 999999999999876  57         999987754

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.80  E-value=0.065  Score=41.56  Aligned_cols=26  Identities=12%  Similarity=0.125  Sum_probs=22.2

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcC-CC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSER-HY   49 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g-~~   49 (366)
                      |++|.|-| .|-||+.+++.|.+++ .+
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~   27 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMK   27 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCce
Confidence            67899998 7999999999988765 44

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.78  E-value=0.037  Score=41.91  Aligned_cols=37  Identities=22%  Similarity=0.274  Sum_probs=29.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc--CCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE--RHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~--g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ++++|.|.|+||-||...++-+.+.  .++         |.+++-..+
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~---------v~~lsa~~N   39 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQ---------VIALTANRN   39 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEE---------EEEEEESSC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcE---------EEEEEeCCC
Confidence            4689999999999999999988764  345         888765443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.70  E-value=0.11  Score=40.58  Aligned_cols=37  Identities=16%  Similarity=0.150  Sum_probs=33.0

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ...++|+|+|| |..|...+..|.++||+         |+++.+.+.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~---------Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQ---------VTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCE---------EEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccc---------eEEEeccCc
Confidence            36789999995 99999999999999999         999987654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.35  E-value=0.18  Score=38.81  Aligned_cols=78  Identities=13%  Similarity=0.081  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccc-cceEEEccC--CChhHHHhhhcC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMF-CHEFHLVDL--RVMDNCLRMTSG   96 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~-~v~~~~~D~--~~~~~l~~~~~~   96 (366)
                      ..+++|+|+|-+.-+|+.++..|+++|..         |+..+......... ... -......++  ...+.+......
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaT---------Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~   97 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGAT---------VYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLD   97 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCE---------EEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHH
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCE---------EEEeccccccccccccceeeeeeccccccccchhHHhhcccc
Confidence            37899999999999999999999999998         88776432211100 000 001111222  234557777778


Q ss_pred             CCEEEEccccc
Q 044498           97 VDNMSNLAADM  107 (366)
Q Consensus        97 ~d~vi~~a~~~  107 (366)
                      +|+||..+|..
T Consensus        98 aDIvIsavG~p  108 (171)
T d1edza1          98 SDVVITGVPSE  108 (171)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEEccCCC
Confidence            99999888854

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.32  E-value=0.047  Score=41.30  Aligned_cols=34  Identities=18%  Similarity=0.011  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW   64 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r   64 (366)
                      .++++|||+|| |.+|..-++.|++.|.+         |++++.
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~---------VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCK---------LTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCE---------EEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCE---------EEEEeC
Confidence            37789999997 99999999999999999         988863

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.23  E-value=0.088  Score=40.36  Aligned_cols=36  Identities=14%  Similarity=0.105  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      .+||+|+|| |++|..++..|.+.+.+       ..|+++++.+
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~-------~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPS-------IEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTT-------SEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCC-------CcEEEEECCC
Confidence            579999996 99999999999998853       1278887654

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.17  E-value=0.069  Score=43.25  Aligned_cols=25  Identities=28%  Similarity=0.413  Sum_probs=23.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHY   49 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~   49 (366)
                      |||+|+|| |.+|...+.+|.++|++
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~   25 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHS   25 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCC
Confidence            68999996 99999999999999987

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.14  E-value=0.062  Score=41.67  Aligned_cols=105  Identities=13%  Similarity=0.105  Sum_probs=60.2

Q ss_pred             CCeEEEEcCCCchhHH--HHHHHHHc----CCCCCCCCCccEEEEEeCCCcccccc--------ccccceEEEccCCChh
Q 044498           23 KLRISSIGVGGFIPSN--IARRLKSE----RHYSTSIPNALYIIASDWNKNEHMME--------DMFCHEFHLVDLRVMD   88 (366)
Q Consensus        23 ~~~vlItGatG~iG~~--l~~~L~~~----g~~~~~~~~~~~V~~~~r~~~~~~~~--------~~~~v~~~~~D~~~~~   88 (366)
                      .|||.|+|| |.+|..  ++..|+..    +.+         +..++.++.+....        ...+..+   .+....
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~e---------ivL~Did~~~~~~~~~~~~~~~~~~~~~~---~i~~~t   68 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGST---------VTLMDIDEERLDAILTIAKKYVEEVGADL---KFEKTM   68 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCE---------EEEECSCHHHHHHHHHHHHHHHHHTTCCC---EEEEES
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCE---------EEEEeCCchHHHHHHHHHHHHHHhcCCCe---EEEEeC
Confidence            479999996 988865  34445432    346         99999876532211        0001111   111223


Q ss_pred             HHHhhhcCCCEEEEcccccCCcccccc-------------------C---c--chhhhhhHHHHHHHHHHHHHcCCC
Q 044498           89 NCLRMTSGVDNMSNLAADMGGMGFIQS-------------------N---H--SVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        89 ~l~~~~~~~d~vi~~a~~~~~~~~~~~-------------------~---~--~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +..++++++|+|+..++..+- .....                   +   +  ......|+.....+++..++.+.+
T Consensus        69 d~~eaL~dad~Vv~~~~~g~~-~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~  144 (171)
T d1obba1          69 NLDDVIIDADFVINTAMVGGH-TYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPK  144 (171)
T ss_dssp             CHHHHHTTCSEEEECCCTTHH-HHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTT
T ss_pred             ChhhcccCCCeEeeecccccc-cceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcC
Confidence            355678999999998874321 00000                   0   0  001235888899999999988865

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=91.99  E-value=0.066  Score=44.65  Aligned_cols=34  Identities=15%  Similarity=0.253  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      |+|+|+|| |.-|...+.+|.++|++         |+++.+...
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~---------V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTD---------AVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCC---------EEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCC---------EEEEecCCC
Confidence            68999996 99999999999999999         999987543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.89  E-value=0.41  Score=35.95  Aligned_cols=24  Identities=21%  Similarity=0.207  Sum_probs=21.8

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHY   49 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~   49 (366)
                      ||.++| .|.+|..+++.|++.|+.
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~   25 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPT   25 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCE
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCE
Confidence            699999 599999999999998876

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.77  E-value=0.092  Score=43.10  Aligned_cols=35  Identities=14%  Similarity=0.063  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .+||+|+|| |..|..++..|.++|++         |+++.+.+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~---------v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVD---------VDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCC---------EEEEeCCCC
Confidence            468999996 99999999999999999         999987643

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.43  E-value=0.089  Score=37.17  Aligned_cols=27  Identities=15%  Similarity=0.209  Sum_probs=24.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHY   49 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~   49 (366)
                      .+++|+|+| +|.-|..++..|.+.+.+
T Consensus        31 ~gK~VlVVG-~g~Sa~dia~~l~~~ak~   57 (107)
T d2gv8a2          31 VGESVLVVG-GASSANDLVRHLTPVAKH   57 (107)
T ss_dssp             TTCCEEEEC-SSHHHHHHHHHHTTTSCS
T ss_pred             CCCeEEEEC-CCCCHHHHHHHHHHhcCE
Confidence            678999999 599999999999887766

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=91.40  E-value=0.13  Score=39.56  Aligned_cols=74  Identities=18%  Similarity=0.140  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCccccccccccceEEEccCCCh----hHHHhhh--
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVM----DNCLRMT--   94 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~----~~l~~~~--   94 (366)
                      ...+|+|+|+ |-+|...+..+...|. .         |+++++.+.+.......+...+. |..+.    .......  
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~---------Vi~~~~~~~rl~~a~~~GAd~~i-n~~~~~~~~~~~~~~~~~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKR---------IIAVDLNPDKFEKAKVFGATDFV-NPNDHSEPISQVLSKMTN   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEECSCGGGHHHHHHTTCCEEE-CGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhch---------heeecchHHHHHHHHHcCCcEEE-cCCCcchhHHHHHHhhcc
Confidence            4568999997 5577777777777765 5         88888887765544455554443 22221    2233332  


Q ss_pred             cCCCEEEEcccc
Q 044498           95 SGVDNMSNLAAD  106 (366)
Q Consensus        95 ~~~d~vi~~a~~  106 (366)
                      .++|++|.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            379999999983

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.20  E-value=0.094  Score=41.33  Aligned_cols=33  Identities=9%  Similarity=0.016  Sum_probs=27.7

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC--CCCCCCCCccEEEEEeCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER--HYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g--~~~~~~~~~~~V~~~~r~~   66 (366)
                      |||+|+|| |++|..++..|.+.+  .+         |+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~---------V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAE---------IQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSE---------EEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCe---------EEEEeCCC
Confidence            68999996 999999999999875  45         88887654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.06  E-value=0.16  Score=41.09  Aligned_cols=37  Identities=22%  Similarity=0.158  Sum_probs=32.8

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ...++|+|+|| |..|...+..|.++|++         |+++.+...
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~---------v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYT---------VHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCE---------EEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccc---------eeeEeeccc
Confidence            46689999996 99999999999999999         999986654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.67  E-value=0.26  Score=39.06  Aligned_cols=72  Identities=7%  Similarity=-0.172  Sum_probs=44.2

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccc-cc---------cccccceEEE-ccCCChhHHHh
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEH-MM---------EDMFCHEFHL-VDLRVMDNCLR   92 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~-~~---------~~~~~v~~~~-~D~~~~~~l~~   92 (366)
                      |||+++|. +-.|..+++.|++.|++         |.++...+.+. ..         ....++.++. .++.+.+.++.
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~---------I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~   70 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYE---------ISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVER   70 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCE---------EEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHH
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCC---------EEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhh
Confidence            68999975 66899999999999999         87654322211 00         0122455554 45556554444


Q ss_pred             hhc-CCCEEEEccc
Q 044498           93 MTS-GVDNMSNLAA  105 (366)
Q Consensus        93 ~~~-~~d~vi~~a~  105 (366)
                      +.+ ++|.+|.+..
T Consensus        71 i~~~~~Dlii~~g~   84 (203)
T d2blna2          71 IAQLSPDVIFSFYY   84 (203)
T ss_dssp             HHHTCCSEEEEESC
T ss_pred             hhhhcccceeeeec
Confidence            332 7998886654

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.61  E-value=0.099  Score=44.34  Aligned_cols=35  Identities=14%  Similarity=0.198  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      |..|+|+|| |.-|..++++|.+.|++         |.++.++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~---------V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKK---------VLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCC---------EEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCc---------EEEEECCCC
Confidence            457999995 99999999999999999         999986543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.26  E-value=0.016  Score=45.46  Aligned_cols=73  Identities=16%  Similarity=0.080  Sum_probs=44.6

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccccc-----ccceEEEccCCChhHHHhhhcC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDM-----FCHEFHLVDLRVMDNCLRMTSG   96 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~-----~~v~~~~~D~~~~~~l~~~~~~   96 (366)
                      ++++|+|+|+ |..+++++..|.+.| +         |.++.|+..+......     .....  ....+...+...+..
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~---------i~I~nR~~~ka~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~   83 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-N---------IIIANRTVEKAEALAKEIAEKLNKKF--GEEVKFSGLDVDLDG   83 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-E---------EEEECSSHHHHHHHHHHHHHHHTCCH--HHHEEEECTTCCCTT
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-c---------eeeehhhhhHHHHHHHHHHHhhchhh--hhhhhhhhhhhccch
Confidence            6789999995 889999999987666 6         9999998664322110     00000  000011112233457


Q ss_pred             CCEEEEccccc
Q 044498           97 VDNMSNLAADM  107 (366)
Q Consensus        97 ~d~vi~~a~~~  107 (366)
                      +|++|++....
T Consensus        84 ~dliIn~tp~g   94 (177)
T d1nvta1          84 VDIIINATPIG   94 (177)
T ss_dssp             CCEEEECSCTT
T ss_pred             hhhhccCCccc
Confidence            89999997754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.13  E-value=0.13  Score=42.84  Aligned_cols=34  Identities=21%  Similarity=0.195  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      .|||+|+|| |.-|...+.+|.+.|++         |+++.+.+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~---------V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLN---------VTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCE---------EEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCC---------EEEEeCCC
Confidence            378999995 99999999999999999         99998654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.72  E-value=0.5  Score=36.11  Aligned_cols=114  Identities=11%  Similarity=0.050  Sum_probs=60.2

Q ss_pred             CCeEEEEcC-CCchhHHHHHHHHHcC----CCCCCCCCccEEEEEeCCCcccc-c-c--------ccccceEEEccCCCh
Q 044498           23 KLRISSIGV-GGFIPSNIARRLKSER----HYSTSIPNALYIIASDWNKNEHM-M-E--------DMFCHEFHLVDLRVM   87 (366)
Q Consensus        23 ~~~vlItGa-tG~iG~~l~~~L~~~g----~~~~~~~~~~~V~~~~r~~~~~~-~-~--------~~~~v~~~~~D~~~~   87 (366)
                      +|||.|+|| +.+.+..++.-+....    .+         +..++.++.... . .        ...+........+| 
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~e---------I~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td-   70 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGE---------LWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD-   70 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEE---------EEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC-
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCE---------EEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC-
Confidence            368999997 2334444544444321    25         888887654311 0 0        00111222222233 


Q ss_pred             hHHHhhhcCCCEEEEcccccCCccccccC---------------c--chhhhhhHHHHHHHHHHHHHcCCCceeEEEEec
Q 044498           88 DNCLRMTSGVDNMSNLAADMGGMGFIQSN---------------H--SVIMYKNTTISFDMLEAARMNGVMSLTFFFVSS  150 (366)
Q Consensus        88 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~---------------~--~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~~SS  150 (366)
                        ..+.++++|+||..|+....+.....+               +  -.....|+...+.+++...+.+..  -++..-|
T Consensus        71 --~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pd--a~~i~vt  146 (169)
T d1s6ya1          71 --RRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPD--AWLINFT  146 (169)
T ss_dssp             --HHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTT--CEEEECS
T ss_pred             --chhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCC--eEEEEeC
Confidence              345678999999999854311000000               0  011235778888889999888766  4454333

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.64  E-value=0.16  Score=42.92  Aligned_cols=35  Identities=14%  Similarity=0.190  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      ..++|+|+|| |..|...+..|.++|++         |+++.+..
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~---------V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQ---------VTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCE---------EEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCC---------EEEEeCCC
Confidence            5579999995 99999999999999999         99998654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.57  E-value=0.15  Score=42.51  Aligned_cols=33  Identities=12%  Similarity=0.089  Sum_probs=30.3

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      +|+|+|| |..|..++..|.+.|++         |.++.+.+.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~---------v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGID---------NVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCC---------EEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCC---------EEEEeCCCC
Confidence            6999996 89999999999999999         999988754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=89.20  E-value=0.29  Score=34.85  Aligned_cols=36  Identities=14%  Similarity=0.112  Sum_probs=28.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHc---CCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSE---RHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~---g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..++++|+|| |++|..++..|.+.   |.+         |+++.+.+.
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~---------Vtli~~~~~   55 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQ---------VDLAYRGDM   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCE---------EEEEESSSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccc---------cceeccccc
Confidence            3478999996 99999999876553   677         988887643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.16  E-value=0.2  Score=38.55  Aligned_cols=27  Identities=15%  Similarity=0.230  Sum_probs=24.2

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHY   49 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~   49 (366)
                      .+++|+|+|| |++|..++..|.+.|.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~   28 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWE   28 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCc
Confidence            3578999995 99999999999999987

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=89.04  E-value=0.51  Score=34.63  Aligned_cols=86  Identities=12%  Similarity=0.088  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCC---CchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccCCChhHHHhhhcCCC
Q 044498           22 GKLRISSIGVG---GFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        22 ~~~~vlItGat---G~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      +.++|.|+|||   +-.|..+++.|++.|++         +..+.-+...         .-+. ...-..++.++-..+|
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~---------~~~v~~~~~~---------~~i~-g~~~~~~l~~i~~~iD   72 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYR---------VLPVNPRFQG---------EELF-GEEAVASLLDLKEPVD   72 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCE---------EEEECGGGTT---------SEET-TEECBSSGGGCCSCCS
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCC---------ceEEEecccc---------ceee-ceecccchhhccCCCc
Confidence            34689999998   67999999999999999         8777432111         0111 1111222333335688


Q ss_pred             EEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCCceeEEE
Q 044498           99 NMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFF  147 (366)
Q Consensus        99 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~r~I~  147 (366)
                      .++-+..                   ......+++.|.+.+++  .+++
T Consensus        73 ~v~v~~p-------------------~~~v~~~v~~~~~~g~k--~i~~  100 (136)
T d1iuka_          73 ILDVFRP-------------------PSALMDHLPEVLALRPG--LVWL  100 (136)
T ss_dssp             EEEECSC-------------------HHHHTTTHHHHHHHCCS--CEEE
T ss_pred             eEEEecc-------------------HHHHHHHHHHHHhhCCC--eEEE
Confidence            8886655                   33445577777788887  5544

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.96  E-value=0.18  Score=42.32  Aligned_cols=32  Identities=31%  Similarity=0.444  Sum_probs=28.7

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~   66 (366)
                      +|+|+|| |.+|..++.+|.++| ++         |+++++..
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~---------V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNN---------ITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCC---------EEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCc---------EEEEeCCC
Confidence            6999996 999999999999999 58         99998764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=88.67  E-value=0.14  Score=39.36  Aligned_cols=108  Identities=12%  Similarity=-0.038  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCCchhHH-HHHHHHHcC-----CCCCCCCCccEEEEEeCCCcccccc----------ccccceEEEccCCC
Q 044498           23 KLRISSIGVGGFIPSN-IARRLKSER-----HYSTSIPNALYIIASDWNKNEHMME----------DMFCHEFHLVDLRV   86 (366)
Q Consensus        23 ~~~vlItGatG~iG~~-l~~~L~~~g-----~~~~~~~~~~~V~~~~r~~~~~~~~----------~~~~v~~~~~D~~~   86 (366)
                      ..||.|+|| |.+|.. ++..|+..-     .+         |..++.++.+....          ......+..     
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~e---------ivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----   67 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRK---------LKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----   67 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEE---------EEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCE---------EEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----
Confidence            458999998 445554 445555431     25         88888776542210          001111111     


Q ss_pred             hhHHHhhhcCCCEEEEcccccCCccccccCcchhhh--------------------hhHHHHHHHHHHHHHcCCCceeEE
Q 044498           87 MDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMY--------------------KNTTISFDMLEAARMNGVMSLTFF  146 (366)
Q Consensus        87 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~--------------------~nv~~~~~ll~a~~~~~~~~~r~I  146 (366)
                      ..+..++++++|+||..++...   ......+..+.                    .|+.....+++..++.+.. ..+|
T Consensus        68 ~~d~~eal~~AD~Vvitag~~~---~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~-A~li  143 (167)
T d1u8xx1          68 TTDPEEAFTDVDFVMAHIRVGK---YAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPD-AWML  143 (167)
T ss_dssp             ESCHHHHHSSCSEEEECCCTTH---HHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTT-CEEE
T ss_pred             cCChhhccCCCCEEEECCCcCC---CCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCC-eEEE
Confidence            1235566789999999998542   11112222222                    2456667777777777755 2444


Q ss_pred             EEe
Q 044498          147 FVS  149 (366)
Q Consensus       147 ~~S  149 (366)
                      .+|
T Consensus       144 ~~T  146 (167)
T d1u8xx1         144 NYS  146 (167)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            433

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.61  E-value=0.6  Score=36.86  Aligned_cols=25  Identities=24%  Similarity=0.456  Sum_probs=22.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHY   49 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~   49 (366)
                      |||+++| ++..|..+++.|++.|++
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~   25 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHE   25 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCc
Confidence            6899998 578999999999999999

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.54  E-value=0.79  Score=34.89  Aligned_cols=37  Identities=14%  Similarity=0.188  Sum_probs=27.0

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW   64 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r   64 (366)
                      ++.+|.|+| .|.+|+.+++.|.++...     -+++|.++..
T Consensus         3 k~i~I~l~G-~G~VG~~l~~~l~~~~~~-----l~~~v~~i~~   39 (168)
T d1ebfa1           3 KVVNVAVIG-AGVVGSAFLDQLLAMKST-----ITYNLVLLAE   39 (168)
T ss_dssp             SEEEEEEEC-CSHHHHHHHHHHHHCCCS-----SEEEEEEEEC
T ss_pred             CEEEEEEEe-CCHHHHHHHHHHHHhHHH-----hhhheEEEEE
Confidence            567899998 799999999999986432     1233666554

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=88.45  E-value=0.88  Score=35.82  Aligned_cols=74  Identities=14%  Similarity=-0.028  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcc-ccc------------cccccceEEEccCCChh
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNE-HMM------------EDMFCHEFHLVDLRVMD   88 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~-~~~------------~~~~~v~~~~~D~~~~~   88 (366)
                      ..|||+++| ++..+..+++.|++.|++         |.++...+.+ ...            ....++.+......+.+
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~---------i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHN---------VVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQ   71 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCE---------EEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSH
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCC---------EEEEEeCCCcccccCccccccchhhhhhccCccccccccccch
Confidence            357899998 588999999999999998         7655432211 110            11224456665555555


Q ss_pred             HHHhhhc--CCCEEEEccc
Q 044498           89 NCLRMTS--GVDNMSNLAA  105 (366)
Q Consensus        89 ~l~~~~~--~~d~vi~~a~  105 (366)
                      .+.+.++  ++|+++-+..
T Consensus        72 ~~~~~~~~~~~d~~v~~~~   90 (206)
T d1fmta2          72 ENQQLVAELQADVMVVVAY   90 (206)
T ss_dssp             HHHHHHHHTTCSEEEEESC
T ss_pred             hhHHHHhhhcceEEEeecc
Confidence            5555554  6888775544

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.35  E-value=0.23  Score=40.74  Aligned_cols=34  Identities=15%  Similarity=0.074  Sum_probs=29.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCC-CCCCCCCccEEEEEeCCCc
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERH-YSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~-~~~~~~~~~~V~~~~r~~~   67 (366)
                      ++|+|+|| |..|..++..|.+.|. +         |.++.+.+.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~---------V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGK---------VTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSE---------EEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCe---------EEEEeCCCC
Confidence            68999996 9999999999999994 7         889887654

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.30  E-value=1.5  Score=34.57  Aligned_cols=99  Identities=16%  Similarity=0.101  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEccC-----------------
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVDL-----------------   84 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D~-----------------   84 (366)
                      ...||.|+| -|.-|..++.+|.+.|.+.      +..++++....... .......+..+..                 
T Consensus        14 ~~~ki~ViG-vGGaG~n~v~~l~~~~~~~------v~~iainTD~~~L~-~~~~~~ki~ig~~~t~g~Gag~~p~~g~~a   85 (209)
T d2vapa1          14 TKAKITVVG-CGGAGNNTITRLKMEGIEG------AKTVAINTDAQQLI-RTKADKKILIGKKLTRGLGAGGNPKIGEEA   85 (209)
T ss_dssp             TCCCEEEEE-EHHHHHHHHHHHHHHTCTT------EEEEEEESBHHHHH-TSCCSEEEECCTTTTTTBCCTTCHHHHHHH
T ss_pred             cCCcEEEEE-eCChHHHHHHHHHHcCCCc------eEEEEEeCCHHHHh-cCCcchhcccccccccccccccchHHHHHH
Confidence            456899999 4999999999999987531      12556654322111 1110011111111                 


Q ss_pred             --CChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           85 --RVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        85 --~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                        .+.+.+.+.++++|.||-+||..+.             +..-+..-+.+.+++.++.
T Consensus        86 a~e~~~~I~~~l~~~d~vfi~AGlGGG-------------TGsgaapvia~~ake~g~l  131 (209)
T d2vapa1          86 AKESAEEIKAAIQDSDMVFITCGLGGG-------------TGTGSAPVVAEISKKIGAL  131 (209)
T ss_dssp             HHHTHHHHHHHHTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHhccCCCEEEEEEeCCCC-------------ccccHHHHHHHHHHHcCCc
Confidence              2345677778899999999998764             2355677789999998864

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=88.18  E-value=0.16  Score=39.35  Aligned_cols=26  Identities=15%  Similarity=0.293  Sum_probs=23.0

Q ss_pred             CCeEEEEcCCCchhHHHHHHHHHcCCC
Q 044498           23 KLRISSIGVGGFIPSNIARRLKSERHY   49 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~~~g~~   49 (366)
                      +.+|+|+|| |++|-.++..|.+.|.+
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~   28 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQ   28 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCc
Confidence            456999995 99999999999999876

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=88.16  E-value=1.4  Score=34.22  Aligned_cols=97  Identities=18%  Similarity=0.136  Sum_probs=62.9

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEcc-------------------C
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD-------------------L   84 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D-------------------~   84 (366)
                      +||.|+|- |.-|..++.+|.+.+.+      .+..++++..... +........+..+.                   .
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~------~v~~iainTD~~~-L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~   72 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIH------GVEFVAVNTDLQV-LEASNADVKIQIGENITRGLGAGGRPEIGEQAAL   72 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCT------TEEEEEEESCHHH-HHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCC------ceEEEEEcCCHHH-HhcCCcceEEecccccCCCcccccCchhhHhHHH
Confidence            57999994 99999999999998743      1115666543321 11111111222221                   1


Q ss_pred             CChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           85 RVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        85 ~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      .+.+.+.+.+++.|.||-+||..+.             +..-++..+.+.+++.++.
T Consensus        73 e~~~~I~~~l~~~d~vfi~AGlGGg-------------TGtgaapviA~~ake~g~l  116 (194)
T d1w5fa1          73 ESEEKIREVLQDTHMVFITAGFGGG-------------TGTGASPVIAKIAKEMGIL  116 (194)
T ss_dssp             HTHHHHHHHTTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHhcCCCeEEEEEecCCC-------------cccchHHHHHHHHHHcCCc
Confidence            2345677788899999999998764             2356677899999999864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.05  E-value=0.26  Score=35.15  Aligned_cols=35  Identities=17%  Similarity=0.254  Sum_probs=27.4

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcC---CCCCCCCCccEEEEEeCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSER---HYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g---~~~~~~~~~~~V~~~~r~~   66 (366)
                      ..++++|+|| |++|..++..|...|   .+         |+++.+.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~---------Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQ---------VTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCE---------EEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcE---------EEEEeccc
Confidence            3478999997 999999997776554   46         88887654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.99  E-value=0.28  Score=41.32  Aligned_cols=35  Identities=20%  Similarity=0.125  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      +..||+|+|| |.-|-..+..|.+.|++         |+++-...
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~---------V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMD---------VTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCE---------EEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCC---------EEEEeCCC
Confidence            4568999995 99999999999999999         99996543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.95  E-value=0.25  Score=40.89  Aligned_cols=31  Identities=13%  Similarity=0.124  Sum_probs=28.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           26 ISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        26 vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      |+|+|| |..|..++.+|.++|++         |+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~---------V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVK---------TLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCC---------EEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCc---------EEEEeCCC
Confidence            899995 99999999999999999         99998754

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.94  E-value=0.61  Score=35.20  Aligned_cols=66  Identities=14%  Similarity=0.139  Sum_probs=36.6

Q ss_pred             CCeEEEEcCCCchhHH-HHHHHHHc-CCCCCCCCCccEEEEE-eCCCcccccc-ccccceEEEccCCChhHHHhhhcCCC
Q 044498           23 KLRISSIGVGGFIPSN-IARRLKSE-RHYSTSIPNALYIIAS-DWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVD   98 (366)
Q Consensus        23 ~~~vlItGatG~iG~~-l~~~L~~~-g~~~~~~~~~~~V~~~-~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d   98 (366)
                      ++||.|+| +|.+|+. .+..|... +.+         ++++ +++....... ...++.+    .++   +..+++++|
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~---------i~~v~d~~~~~~~~~~~~~~~~~----~~~---~~~l~~~~D   63 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWT---------LQGAWSPTRAKALPICESWRIPY----ADS---LSSLAASCD   63 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEE---------EEEEECSSCTTHHHHHHHHTCCB----CSS---HHHHHTTCS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcE---------EEEEEechhHhhhhhhhcccccc----ccc---chhhhhhcc
Confidence            46899999 6999976 45555543 455         6655 4554432221 1112221    122   334457899


Q ss_pred             EEEEccc
Q 044498           99 NMSNLAA  105 (366)
Q Consensus        99 ~vi~~a~  105 (366)
                      +|+-+..
T Consensus        64 ~V~I~tp   70 (164)
T d1tlta1          64 AVFVHSS   70 (164)
T ss_dssp             EEEECSC
T ss_pred             ccccccc
Confidence            9885544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.91  E-value=0.31  Score=36.58  Aligned_cols=35  Identities=14%  Similarity=0.188  Sum_probs=28.8

Q ss_pred             CCeEEEE-cCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           23 KLRISSI-GVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        23 ~~~vlIt-GatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      .++++|+ .+.||||..++..|.++|++         |+++.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~---------Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHE---------VTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCE---------EEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCe---------EEEEecCC
Confidence            4566665 24599999999999999999         99998764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.73  E-value=0.34  Score=35.59  Aligned_cols=35  Identities=29%  Similarity=0.233  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCCchhHHHHHHHH----HcCCCCCCCCCccEEEEEeCCCc
Q 044498           23 KLRISSIGVGGFIPSNIARRLK----SERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        23 ~~~vlItGatG~iG~~l~~~L~----~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .++|+|+|| |++|..++..|.    +.|.+         |+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~---------Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTE---------VIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCE---------EEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCE---------EEEeccccc
Confidence            468999996 999999999885    35888         998876543

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.13  E-value=0.31  Score=36.81  Aligned_cols=31  Identities=16%  Similarity=0.192  Sum_probs=25.9

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK   66 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~   66 (366)
                      ||+|+|| |++|..++..|. ++.+         |+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~---------Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYE---------VTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSE---------EEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCC---------EEEEeccc
Confidence            7999996 999999999885 4678         99987653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=85.85  E-value=1.5  Score=35.48  Aligned_cols=33  Identities=18%  Similarity=0.025  Sum_probs=29.8

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW   64 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r   64 (366)
                      ..++|+|-| -|.+|+++++.|.+.|.+         |++++-
T Consensus        30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gak---------vv~vsD   62 (242)
T d1v9la1          30 EGKTVAIQG-MGNVGRWTAYWLEKMGAK---------VIAVSD   62 (242)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCE---------EEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCe---------EEEeec
Confidence            678999999 799999999999999999         888763

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=85.75  E-value=0.7  Score=36.20  Aligned_cols=42  Identities=7%  Similarity=0.022  Sum_probs=25.8

Q ss_pred             EEEEcCCCchhHHHHH-HHHHcCCCCCCCCCccEEEEEeCCCcc
Q 044498           26 ISSIGVGGFIPSNIAR-RLKSERHYSTSIPNALYIIASDWNKNE   68 (366)
Q Consensus        26 vlItGatG~iG~~l~~-~L~~~g~~~~~~~~~~~V~~~~r~~~~   68 (366)
                      +.|+||||-+.+.-+- .|.+. +....++.+++|++++|..-.
T Consensus         8 lVIFGaTGDLa~RKL~PAL~~L-~~~g~lp~~~~Iig~aR~~~~   50 (195)
T d1h9aa1           8 VTFFGGTGDLAKRKLYPSVFNL-YKKGYLQKHFAIVGTARQALN   50 (195)
T ss_dssp             EEEETTTSHHHHHTHHHHHHHH-HHTTSSCSSEEEEEEESSCCC
T ss_pred             EEEECcccHHHHhHHHHHHHHH-HHcCCCCCCCEEEEEECCcCc
Confidence            4578999999875332 33332 111234556779999997654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=85.62  E-value=0.38  Score=38.70  Aligned_cols=33  Identities=18%  Similarity=0.324  Sum_probs=29.0

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcC-CCCCCCCCccEEEEEeCCCc
Q 044498           25 RISSIGVGGFIPSNIARRLKSER-HYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g-~~~~~~~~~~~V~~~~r~~~   67 (366)
                      +|+|+|| |.-|...+..|.++| ++         |+++.+...
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~---------V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITD---------LLILEATDH   35 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCC---------EEEECSSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCc---------EEEEECCCC
Confidence            6999996 999999999999999 58         999987643

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.40  E-value=0.98  Score=37.66  Aligned_cols=32  Identities=19%  Similarity=0.106  Sum_probs=29.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEe
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASD   63 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~   63 (366)
                      ..++|+|-| .|.+|+++++.|.+.|.+         |++++
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gak---------vv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAK---------CVAVG   66 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCE---------EEEEE
Confidence            678999999 599999999999999999         88876

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.07  E-value=0.45  Score=40.06  Aligned_cols=36  Identities=14%  Similarity=0.190  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      ..-.|+|+|| |+.|...+..|.+.|.+         |+++.+.+.
T Consensus         6 ~~~dV~IIGA-G~sGl~~a~~L~~~G~~---------v~i~Ek~~~   41 (298)
T d1w4xa1           6 EEVDVLVVGA-GFSGLYALYRLRELGRS---------VHVIETAGD   41 (298)
T ss_dssp             SEEEEEEECC-SHHHHHHHHHHHHTTCC---------EEEECSSSS
T ss_pred             CCCCEEEECc-cHHHHHHHHHHHhCCCC---------EEEEEcCCC
Confidence            3457999996 99999999999999999         999987654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=84.43  E-value=0.24  Score=40.09  Aligned_cols=67  Identities=16%  Similarity=0.166  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhc-CCCE
Q 044498           22 GKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTS-GVDN   99 (366)
Q Consensus        22 ~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~-~~d~   99 (366)
                      ..++|+|-| -|.+|+++++.|.+.|.+         |++.+.+...-... ...+..     ..+.+   +++. .||+
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gak---------vv~~d~~~~~~~~~~~~~g~~-----~~~~~---~~~~~~cDI   99 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAK---------LVVTDVNKAAVSAAVAEEGAD-----AVAPN---AIYGVTCDI   99 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCE---------EEEECSCHHHHHHHHHHHCCE-----ECCGG---GTTTCCCSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCE---------EEeecccHHHHHHHHHhcCCc-----ccCCc---ccccccccE
Confidence            678999999 699999999999999999         88887554321111 111111     12222   2333 7999


Q ss_pred             EEEcccc
Q 044498          100 MSNLAAD  106 (366)
Q Consensus       100 vi~~a~~  106 (366)
                      ++-||..
T Consensus       100 l~PcA~~  106 (230)
T d1leha1         100 FAPCALG  106 (230)
T ss_dssp             EEECSCS
T ss_pred             ecccccc
Confidence            9999883

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=84.25  E-value=0.85  Score=34.74  Aligned_cols=31  Identities=19%  Similarity=0.142  Sum_probs=26.8

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDW   64 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r   64 (366)
                      |||.|=| -|-||+.+.+.|.+++.+         |.++.-
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~---------iv~INd   31 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVE---------VALIND   31 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCC---------EEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCE---------EEEECC
Confidence            5899998 699999999999998888         887753

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.87  E-value=0.59  Score=37.08  Aligned_cols=33  Identities=12%  Similarity=0.234  Sum_probs=29.6

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      -|+|+| +|.-|...+..|.++|++         |.++.++..
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~~---------V~vlE~~~~   39 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGKK---------VLHIDKQDH   39 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCC---------EEEECSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCC---------EEEEcCCCC
Confidence            389999 599999999999999999         999987653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.90  E-value=1.5  Score=32.61  Aligned_cols=41  Identities=12%  Similarity=-0.036  Sum_probs=31.5

Q ss_pred             CCCCCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           18 HWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        18 ~~~~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      +++.-.++|+|+|| |..|.-.+..+++.|...        |+.+.|...
T Consensus        40 ~~p~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~--------V~vi~rr~~   80 (153)
T d1gtea3          40 PLPSIRGAVIVLGA-GDTAFDCATSALRCGARR--------VFLVFRKGF   80 (153)
T ss_dssp             CCCCCCSEEEEECS-SHHHHHHHHHHHHTTCSE--------EEEECSSCG
T ss_pred             ccccCCCEEEEECC-ChhHHHHHHHHHHcCCcc--------eeEEEeCCh
Confidence            44445678999996 999999999999998651        767776543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.72  E-value=0.2  Score=38.21  Aligned_cols=69  Identities=10%  Similarity=-0.050  Sum_probs=40.0

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHc------CCCCCCCCCccEEEEEeCCCcccccc-------ccccceEEEccCCChhHH
Q 044498           24 LRISSIGVGGFIPSNIARRLKSE------RHYSTSIPNALYIIASDWNKNEHMME-------DMFCHEFHLVDLRVMDNC   90 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~------g~~~~~~~~~~~V~~~~r~~~~~~~~-------~~~~v~~~~~D~~~~~~l   90 (366)
                      |||.|+|| |-+|..++-..+.+      +.+         +..+|.++.+....       ......+.. . +   ..
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~e---------l~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t-~---~~   65 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDE---------VIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-S-D---TF   65 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCE---------EEEECSCHHHHHHHHHHHHHHHTTSSEEEE-C-S---SH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccE---------EEEEecCcHHHHHHHHHHHhhhccCceEEE-e-c---Cc
Confidence            68999998 55776666443322      235         88888765532211       011112222 1 1   23


Q ss_pred             HhhhcCCCEEEEccccc
Q 044498           91 LRMTSGVDNMSNLAADM  107 (366)
Q Consensus        91 ~~~~~~~d~vi~~a~~~  107 (366)
                      .+.++++|+||..|+..
T Consensus        66 ~~~l~~aDvVVita~~~   82 (162)
T d1up7a1          66 EGAVVDAKYVIFQFRPG   82 (162)
T ss_dssp             HHHHTTCSEEEECCCTT
T ss_pred             ccccCCCCEEEEecccC
Confidence            35678999999999853

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.17  E-value=4.7  Score=31.21  Aligned_cols=96  Identities=17%  Similarity=0.097  Sum_probs=61.8

Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCccccccccccceEEEcc-------------------CC
Q 044498           25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD-------------------LR   85 (366)
Q Consensus        25 ~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~~~~~~~~~~v~~~~~D-------------------~~   85 (366)
                      +|.|+| -|.-|..++.+|.+.+..      .+.+++++......... .....+..+.                   ..
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~------~v~~iainTD~~~L~~~-~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e   74 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVE------GVEFICANTDAQALKNI-AARTVLQLGPGVTKGLGAGANPEVGRQAALE   74 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCC------SEEEEEEESBTGGGSSC-SCSEEEECCHHHHTTBCCCSCHHHHHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCC------CeEEEEEeCcHHHHhcC-CccceeccccccccCCCCCCChHHHHHHHHH
Confidence            578888 488999999999998753      12266666543321111 0000111111                   12


Q ss_pred             ChhHHHhhhcCCCEEEEcccccCCccccccCcchhhhhhHHHHHHHHHHHHHcCCC
Q 044498           86 VMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVM  141 (366)
Q Consensus        86 ~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~  141 (366)
                      +.+.+.+.+++.|.||-+||..+.             +..-+..-+.+.+++.++.
T Consensus        75 ~~~~I~~~l~~~d~vfi~AGlGGG-------------TGtgaapviA~~ake~g~l  117 (198)
T d1ofua1          75 DRERISEVLEGADMVFITTGMGGG-------------TGTGAAPIIAEVAKEMGIL  117 (198)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHhCCCCeEEEEecCCCC-------------ccccHHHHHHHHHHHcCCC
Confidence            445677788999999999998764             2356677899999999864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.62  E-value=0.64  Score=37.76  Aligned_cols=37  Identities=22%  Similarity=0.043  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCCCchhHHHHHHHHHcCCCCCCCCCccEEEEEeCCCc
Q 044498           21 SGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKN   67 (366)
Q Consensus        21 ~~~~~vlItGatG~iG~~l~~~L~~~g~~~~~~~~~~~V~~~~r~~~   67 (366)
                      .+.-.|+|+|| |-.|...+..|.++|++         |.++.+.+.
T Consensus         2 ~~~~DViIIGa-G~aGl~aA~~la~~G~~---------V~vlEk~~~   38 (253)
T d2gqfa1           2 SQYSENIIIGA-GAAGLFCAAQLAKLGKS---------VTVFDNGKK   38 (253)
T ss_dssp             EEECSEEEECC-SHHHHHHHHHHHHTTCC---------EEEECSSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCc---------EEEEecCCC
Confidence            34456999996 99999999999999999         999987754

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=80.50  E-value=2.3  Score=32.31  Aligned_cols=23  Identities=30%  Similarity=0.297  Sum_probs=20.3

Q ss_pred             CeEEEEcCCCchhHHHHHHHHHcC
Q 044498           24 LRISSIGVGGFIPSNIARRLKSER   47 (366)
Q Consensus        24 ~~vlItGatG~iG~~l~~~L~~~g   47 (366)
                      |||.|=| -|-||+.+++.+++++
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~   24 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGG   24 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCC
Confidence            5899999 7999999999999764

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=80.46  E-value=0.85  Score=34.46  Aligned_cols=67  Identities=21%  Similarity=0.112  Sum_probs=34.7

Q ss_pred             CeEEEEcCCCchhHHH-HHHHHHc-CCCCCCCCCccEEEEEeCCCcccccc-ccccceEEEccCCChhHHHhhhcCCCEE
Q 044498           24 LRISSIGVGGFIPSNI-ARRLKSE-RHYSTSIPNALYIIASDWNKNEHMME-DMFCHEFHLVDLRVMDNCLRMTSGVDNM  100 (366)
Q Consensus        24 ~~vlItGatG~iG~~l-~~~L~~~-g~~~~~~~~~~~V~~~~r~~~~~~~~-~~~~v~~~~~D~~~~~~l~~~~~~~d~v  100 (366)
                      +||.|+| +|.+|+.. +..|.+. +.+         +.++++++...... ...++..+   ++|.+++.+  .++|+|
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~---------~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~ll~--~~iD~V   66 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIE---------LVLCTRNPKVLGTLATRYRVSAT---CTDYRDVLQ--YGVDAV   66 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEE---------EEEECSCHHHHHHHHHHTTCCCC---CSSTTGGGG--GCCSEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcE---------EEEEECCHHHHHHHHHhcccccc---cccHHHhcc--ccccee
Confidence            5899999 58899764 4444444 345         66666654332211 11111211   233333222  378998


Q ss_pred             EEccc
Q 044498          101 SNLAA  105 (366)
Q Consensus       101 i~~a~  105 (366)
                      +-+..
T Consensus        67 ~I~tp   71 (167)
T d1xeaa1          67 MIHAA   71 (167)
T ss_dssp             EECSC
T ss_pred             ccccc
Confidence            85544