Citrus Sinensis ID: 044519
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | 2.2.26 [Sep-21-2011] | |||||||
| Q6UDF0 | 526 | Mannan synthase 1 OS=Cyam | N/A | no | 0.985 | 1.0 | 0.765 | 0.0 | |
| Q9LZR3 | 533 | Glucomannan 4-beta-mannos | yes | no | 0.958 | 0.960 | 0.637 | 0.0 | |
| Q7PC76 | 521 | Glucomannan 4-beta-mannos | yes | no | 0.956 | 0.980 | 0.616 | 0.0 | |
| Q9FNI7 | 534 | Glucomannan 4-beta-mannos | no | no | 0.955 | 0.955 | 0.598 | 0.0 | |
| Q67VS7 | 527 | Probable mannan synthase | no | no | 0.949 | 0.962 | 0.585 | 0.0 | |
| Q9LQC9 | 556 | Probable mannan synthase | no | no | 0.960 | 0.922 | 0.610 | 0.0 | |
| Q9T0L2 | 537 | Probable mannan synthase | no | no | 0.940 | 0.934 | 0.568 | 0.0 | |
| Q84W54 | 553 | Probable mannan synthase | no | no | 0.936 | 0.904 | 0.557 | 1e-176 | |
| Q9LR87 | 552 | Probable mannan synthase | no | no | 0.923 | 0.893 | 0.584 | 1e-175 | |
| Q9ZQN8 | 556 | Probable mannan synthase | no | no | 0.925 | 0.888 | 0.567 | 1e-174 |
| >sp|Q6UDF0|CSLA1_CYATE Mannan synthase 1 OS=Cyamopsis tetragonoloba GN=ManS PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/534 (76%), Positives = 461/534 (86%), Gaps = 8/534 (1%)
Query: 1 MKNLIFQEPKERVTDGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIV 60
M+NLIF+EP+ + +S + YAW SIRA VI+PLL LA+I+CSVMS+MLF+ERV MA V
Sbjct: 1 MRNLIFEEPEGIPGNSSSSLRYAWQSIRAPVIIPLLKLAVIVCSVMSIMLFVERVAMAAV 60
Query: 61 ILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPS 120
IL VKVLRKKRYT+Y LE MK+ LE +K YPMVL+QIPMYNEKEVYKLSIGA CGLSWP+
Sbjct: 61 ILIVKVLRKKRYTKYNLEAMKQKLERSKKYPMVLIQIPMYNEKEVYKLSIGAVCGLSWPA 120
Query: 121 DRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180
DR IVQVLDDSTN VLR +LVE+EC KWI+KGVNVKYE R+NRNGYKAGALKE
Sbjct: 121 DRFIVQVLDDSTNPVLR--------ELVEMECQKWIQKGVNVKYENRRNRNGYKAGALKE 172
Query: 181 GLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRL 240
GLEKQYV+DC+FV IFDADFQPD DFLW TIPYLLEN +LGLVQARWKFVN++EC+MTRL
Sbjct: 173 GLEKQYVEDCEFVAIFDADFQPDADFLWNTIPYLLENPKLGLVQARWKFVNSEECMMTRL 232
Query: 241 QEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASL 300
QEMSLDYHFSVEQEVGSST FFGFNGTAGVWRIQAI+DAGGWKDRTTVEDMDLAVRASL
Sbjct: 233 QEMSLDYHFSVEQEVGSSTYSFFGFNGTAGVWRIQAIKDAGGWKDRTTVEDMDLAVRASL 292
Query: 301 KGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYL 360
GW+FVFVGD+ VKNELPSTFKAYR+QQHRWSCGP+NLF KMT+EII C+RV + KRL+L
Sbjct: 293 HGWEFVFVGDVKVKNELPSTFKAYRFQQHRWSCGPANLFKKMTKEIICCKRVPLLKRLHL 352
Query: 361 IYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFH 420
IYAFF VRKI+AHWVTFFFYCIVIP V+VPE+ L K IAIYIPATIT+LNAV TPRS H
Sbjct: 353 IYAFFFVRKIVAHWVTFFFYCIVIPACVIVPEVNLKKQIAIYIPATITILNAVSTPRSMH 412
Query: 421 LIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVG 480
L+V WILFENVMSL R KAAIIGLLEANRVNEWVVTEK GN KQ+NN + + SR ++
Sbjct: 413 LLVLWILFENVMSLHRTKAAIIGLLEANRVNEWVVTEKLGNAMKQRNNARPSRASRFRII 472
Query: 481 ERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
ER+H LE+I+G +ML+CA Y+L+F DHFFVYLLLQAGAFF MGFG VG VP
Sbjct: 473 ERIHPLEIIVGMYMLHCATYDLLFGHDHFFVYLLLQAGAFFTMGFGLVGTIVPT 526
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Possesses 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. The galactomannan is a hemicellulosic storage polysaccharide accumulated in the form of secondary wall thickenings in the seed endosperm. Cyamopsis tetragonoloba (taxid: 3832) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q9LZR3|CSLA9_ARATH Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/521 (63%), Positives = 414/521 (79%), Gaps = 9/521 (1%)
Query: 15 DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTE 74
D T +S + IRA +IVP L L + +C MS+MLF+ERVYM IVI VK+ +K
Sbjct: 20 DITMQMSMVLDQIRAPLIVPALRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKR 79
Query: 75 YKLEEMKEDLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTN 133
+K E +K+D+EL N +YPMVL+QIPM+NE+EVY+LSIGAACGLSWPSDR+++QVLDDST+
Sbjct: 80 FKYEPIKDDIELGNSAYPMVLIQIPMFNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTD 139
Query: 134 EVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFV 193
++ LVE+EC +W KGVN+KYE R NRNGYKAGALKEG++K YVK C +V
Sbjct: 140 PTIK--------DLVEMECSRWASKGVNIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYV 191
Query: 194 VIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253
IFDADFQP+ DFLWRT+PYLL N +L LVQARWKFVN+DECLMTR+QEMSLDYHF+VEQ
Sbjct: 192 AIFDADFQPEADFLWRTVPYLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQ 251
Query: 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGV 313
EVGSST FFGFNGTAG+WRI A+ +AGGWKDRTTVEDMDLAVRASLKGWKF+++G L V
Sbjct: 252 EVGSSTYAFFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKV 311
Query: 314 KNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAH 373
KNELPSTFKAYRYQQHRWSCGP+NLF KM EI+ + V++WK++++IY+FF+VRK++AH
Sbjct: 312 KNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNKNVTLWKKVHVIYSFFVVRKLVAH 371
Query: 374 WVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMS 433
VTF FYC+++P +VLVPE+ + K A+YIP+ ITLLNAV TPRS HL+VFWILFENVMS
Sbjct: 372 IVTFIFYCVILPATVLVPEVTVPKWGAVYIPSVITLLNAVGTPRSLHLMVFWILFENVMS 431
Query: 434 LLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHVLELIMGTF 493
L R KA IGLLE RVNEW+VTEK G+ K + + K R + G+R+HVLEL +G +
Sbjct: 432 LHRTKATFIGLLEGGRVNEWIVTEKLGDVKAKSATKTSKKVIRFRFGDRIHVLELGVGMY 491
Query: 494 MLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
+L+ Y+ F ++H+++YL QA AFFI GFG +G VPN
Sbjct: 492 LLFVGCYDAFFGKNHYYLYLFAQAIAFFIAGFGQIGTIVPN 532
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Possesses glucomannan synthase and mannan synthase activities in vitro. Mannan synthase consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 3 EC: 2 |
| >sp|Q7PC76|CSLA1_ORYSJ Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLA1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/522 (61%), Positives = 415/522 (79%), Gaps = 11/522 (2%)
Query: 16 GTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEY 75
G +G+ AW+ +RA VIVPLL LA+ +C MS++LF+ER+YMA+VI VK+LR++ Y
Sbjct: 7 GAAGLPEAWSQVRAPVIVPLLRLAVAVCLTMSVLLFLERMYMAVVISGVKILRRRPDRRY 66
Query: 76 KLEEM-KEDLELNKS-YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTN 133
+ + + +D EL S +P+VL+QIPM+NE+EVY+LSIGA CGLSWPSDRL+VQVLDDST+
Sbjct: 67 RCDPIPDDDPELGTSAFPVVLIQIPMFNEREVYQLSIGAVCGLSWPSDRLVVQVLDDSTD 126
Query: 134 EVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFV 193
V++ ++V +EC +W KGVN+ Y+ R+NR GYKAGALKEG++ YV++C++V
Sbjct: 127 PVIK--------EMVRIECERWAHKGVNITYQIRENRKGYKAGALKEGMKHGYVRECEYV 178
Query: 194 VIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253
IFDADFQPD DFL RTIP+L+ N ++ LVQARW+FVNADECLMTR+QEMSLDYHF+VEQ
Sbjct: 179 AIFDADFQPDPDFLRRTIPFLVHNSDIALVQARWRFVNADECLMTRMQEMSLDYHFTVEQ 238
Query: 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGV 313
EV SS C FFGFNGTAGVWR+ A+ +AGGWKDRTTVEDMDLA+RASLKGWKFV++GD+ V
Sbjct: 239 EVSSSVCAFFGFNGTAGVWRVSAVNEAGGWKDRTTVEDMDLAIRASLKGWKFVYLGDVQV 298
Query: 314 KNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAH 373
K+ELPSTFKA+R+QQHRWSCGP+NLF KM EI+ ++V++WK++++IY FF++RKIIAH
Sbjct: 299 KSELPSTFKAFRFQQHRWSCGPANLFRKMLMEIVRNKKVTIWKKIHVIYNFFLIRKIIAH 358
Query: 374 WVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMS 433
VTF FYC++IP ++ VPE+++ K +YIP ITLLN+V TPRSFHL+ FWILFENVMS
Sbjct: 359 IVTFAFYCLIIPATIFVPEVRIPKWGCVYIPTIITLLNSVGTPRSFHLLFFWILFENVMS 418
Query: 434 LLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSR-SQVGERLHVLELIMGT 492
L R KA +IGLLEA R NEWVVTEK GN K K++ K+ K +V +RL+V EL +
Sbjct: 419 LHRTKATLIGLLEAGRANEWVVTEKLGNALKMKSSSKSSAKKSFMRVWDRLNVTELGVAA 478
Query: 493 FMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
F+ C Y+L F +DHFF+YL Q AFFI+G GYVG VP
Sbjct: 479 FLFSCGWYDLAFGKDHFFIYLFFQGAAFFIVGIGYVGTIVPQ 520
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Possesses glucomannan synthase and mannan synthase activities in vitro. Mannan synthase consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 3 EC: 2 |
| >sp|Q9FNI7|CSLA2_ARATH Glucomannan 4-beta-mannosyltransferase 2 OS=Arabidopsis thaliana GN=CSLA2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/521 (59%), Positives = 408/521 (78%), Gaps = 11/521 (2%)
Query: 17 TSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYK 76
T + W ++A VIVPLL LA+ +C +MS+ML ERVYM IVI+ VK+ KK YK
Sbjct: 22 TGQLGMIWELVKAPVIVPLLQLAVYICLLMSVMLLCERVYMGIVIVLVKLFWKKPDKRYK 81
Query: 77 LEEMKEDLELNKS-YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEV 135
E + +D EL S +P+VLVQIPM+NE+EVYKLSIGAACGLSWPSDRL++QVLDDST+
Sbjct: 82 FEPIHDDEELGSSNFPVVLVQIPMFNEREVYKLSIGAACGLSWPSDRLVIQVLDDSTDPT 141
Query: 136 LRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVI 195
++ ++VE+EC +W KG+N++Y+ R+NR GYKAGALKEGL++ YVK C++VVI
Sbjct: 142 VK--------QMVEVECQRWASKGINIRYQIRENRVGYKAGALKEGLKRSYVKHCEYVVI 193
Query: 196 FDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEV 255
FDADFQP+ DFL R+IP+L+ N + LVQARW+FVN+DECL+TR+QEMSLDYHF+VEQEV
Sbjct: 194 FDADFQPEPDFLRRSIPFLMHNPNIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEV 253
Query: 256 GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKN 315
GSST FFGFNGTAG+WRI AI +AGGWKDRTTVEDMDLAVRASL+GWKF+++GDL VK+
Sbjct: 254 GSSTHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKS 313
Query: 316 ELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWV 375
ELPSTF+A+R+QQHRWSCGP+NLF KM EI+ ++V WK++Y+IY+FF VRKIIAHWV
Sbjct: 314 ELPSTFRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHWV 373
Query: 376 TFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLL 435
TF FYC+V+P ++LVPE+++ ++YIP+ IT+LN+V TPRS HL+ +WILFENVMSL
Sbjct: 374 TFCFYCVVLPLTILVPEVKVPIWGSVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLH 433
Query: 436 RAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRS--QVGERLHVLELIMGTF 493
R KA +IGL EA R NEWVVT K G+ + K N K +K+ ++ +RL+ LEL F
Sbjct: 434 RTKATLIGLFEAGRANEWVVTAKLGSGQSAKGNTKGIKRFPRIFKLPDRLNTLELGFAAF 493
Query: 494 MLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
+ C Y+ + ++++F+YL LQ +FFI G G++G VP+
Sbjct: 494 LFVCGCYDFVHGKNNYFIYLFLQTMSFFISGLGWIGTYVPS 534
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Possesses glucomannan synthase and mannan synthase activities in vitro. Mannan synthase consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 3 EC: 2 |
| >sp|Q67VS7|CSLA9_ORYSJ Probable mannan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLA9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/524 (58%), Positives = 408/524 (77%), Gaps = 17/524 (3%)
Query: 20 ISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEE 79
I+ W ++A V+VPLL L++ C MS+MLF+E+VYM++V++ V + ++ Y+ +
Sbjct: 12 IAAMWEQVKAPVVVPLLRLSVAACLAMSVMLFVEKVYMSVVLVGVHLFGRRPDRRYRCDP 71
Query: 80 M------KEDLEL---NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD 130
+ +D EL N ++PMVL+QIPMYNE+EVYKLSIGAACGLSWPSDR+IVQVLDD
Sbjct: 72 IVAAGADNDDPELADANAAFPMVLIQIPMYNEREVYKLSIGAACGLSWPSDRVIVQVLDD 131
Query: 131 STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDC 190
ST+ V++ ++V++EC +W KGV +KYE R NR GYKAGAL+EG++ YV+DC
Sbjct: 132 STDPVIK--------EMVQVECKRWESKGVRIKYEIRDNRVGYKAGALREGMKHGYVRDC 183
Query: 191 QFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250
+V IFDADFQPD DFL RTIP+L+ N ++ LVQARWKFVNA+ECLMTR+QEMSLDYHF
Sbjct: 184 DYVAIFDADFQPDPDFLARTIPFLVHNPDIALVQARWKFVNANECLMTRMQEMSLDYHFK 243
Query: 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGD 310
VEQEVGSST FFGFNGTAGVWRI A+ +AGGWKDRTTVEDMDLAVRA LKGWKFV++GD
Sbjct: 244 VEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLGD 303
Query: 311 LGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKI 370
L VK+ELPSTFKA+RYQQHRWSCGP+NLF KM EI ++V++WK++Y+IY FF+VRKI
Sbjct: 304 LMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVRKI 363
Query: 371 IAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFEN 430
I H VTF FYC+V+P +VL+PE+++ + +Y+P+ +T+LN++ TPRS HL++FW+LFEN
Sbjct: 364 IGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRSLHLLIFWVLFEN 423
Query: 431 VMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHVLELIM 490
VMSL R KA +IGLLE RVNEWVVTEK G+ K K K ++ R ++G+R++ LEL
Sbjct: 424 VMSLHRTKATLIGLLETGRVNEWVVTEKLGDALKLKLPGKAFRRPRMRIGDRVNALELGF 483
Query: 491 GTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
++ +C Y++ + + ++ ++L LQ+ FFI+G GYVG VP+
Sbjct: 484 SAYLSFCGCYDIAYGKGYYSLFLFLQSITFFIIGVGYVGTIVPH 527
|
Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LQC9|CSLA3_ARATH Probable mannan synthase 3 OS=Arabidopsis thaliana GN=CSLA3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/529 (61%), Positives = 396/529 (74%), Gaps = 16/529 (3%)
Query: 14 TDGT--SGIS----YAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVL 67
TDG SGI Y W R V +P+L + +C VMSL+LFIERVYM+IV+++VK+L
Sbjct: 35 TDGVVRSGIIGEIIYIWKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVVVFVKLL 94
Query: 68 RKKRYTEYKLEEMKED-LEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIV 125
R+ +K E + +D LEL N +YPMVL+QIPMYNEKEV +LSIGAAC LSWP DR+IV
Sbjct: 95 RRTPEKVHKWEPINDDDLELANTNYPMVLIQIPMYNEKEVCQLSIGAACRLSWPLDRMIV 154
Query: 126 QVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQ 185
QVLDDST+ +++LV EC KW KG+N+ E R NR GYKAGALK G+
Sbjct: 155 QVLDDSTDPA--------SKELVNAECDKWARKGINIMSEIRDNRIGYKAGALKAGMMHN 206
Query: 186 YVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245
YVK C+FV IFDADFQPD DFL RTIP+L+ N E+ LVQ RWKFVNA+ECLMTR+QEMSL
Sbjct: 207 YVKQCEFVAIFDADFQPDPDFLERTIPFLIHNHEISLVQCRWKFVNANECLMTRMQEMSL 266
Query: 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKF 305
+YHF EQE GSS FFGFNGTAGVWRI A+ +AGGWKDRTTVEDMDLAVRA L GWKF
Sbjct: 267 NYHFVAEQESGSSIHAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRACLHGWKF 326
Query: 306 VFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFF 365
V+V D+ VKNELPSTFKAYR+QQHRWSCGP+NL+ KMT EI+ ++VS WK+LYLIY FF
Sbjct: 327 VYVHDVEVKNELPSTFKAYRFQQHRWSCGPANLWRKMTMEILQNKKVSAWKKLYLIYNFF 386
Query: 366 IVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFW 425
+RKI+ H TF FYC+++PT+VL PE+Q+ K +Y P TIT+LNA+ TPRS HL+VFW
Sbjct: 387 FIRKIVVHIFTFVFYCLILPTTVLFPELQVPKWATVYFPTTITILNAIATPRSLHLLVFW 446
Query: 426 ILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHV 485
ILFENVMS+ R KA IGLLEA RVNEWVVTEK G+T K K K K ++ G+RL+
Sbjct: 447 ILFENVMSMHRTKATFIGLLEAGRVNEWVVTEKLGDTLKSKLIGKATTKLYTRFGQRLNW 506
Query: 486 LELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
EL++G ++ +C Y+ + +F+VYL LQ+ AFF+ G GY+G VP
Sbjct: 507 RELVVGLYIFFCGCYDFAYGGSYFYVYLFLQSCAFFVAGVGYIGTFVPT 555
|
Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9T0L2|CSLAF_ARATH Probable mannan synthase 15 OS=Arabidopsis thaliana GN=CSLA15 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/517 (56%), Positives = 387/517 (74%), Gaps = 15/517 (2%)
Query: 15 DGTS-GISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYT 73
DG +S W R IVPL +++C ++SL++F+E VYM +V+LYVK+ +K
Sbjct: 33 DGVGINMSTMWRETRNVFIVPLFKCIVVMCLIISLLVFVESVYMNLVVLYVKLFNRKPEK 92
Query: 74 EYKLEEMKEDLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDST 132
YK E M+ED+EL +++YPMVLVQIPMYNE+EV++LSIGAAC L+WPSDRLIVQVLDDST
Sbjct: 93 VYKWEAMQEDMELGHQNYPMVLVQIPMYNEREVFELSIGAACRLTWPSDRLIVQVLDDST 152
Query: 133 NEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQF 192
+ + +LV +EC KW K +N+ YE R+NRNGYKAGALK G+ YVK CQ+
Sbjct: 153 DPAI--------MELVSMECTKWASKDININYERRENRNGYKAGALKHGMRHSYVKQCQY 204
Query: 193 VVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252
+ IFDADFQP+ D+L R IP+L+ N E+ LVQARW+FVNA+ CLMTR+QEMSL+YHF E
Sbjct: 205 LAIFDADFQPEPDYLQRAIPFLIHNPEVALVQARWRFVNANTCLMTRMQEMSLNYHFMAE 264
Query: 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312
Q+ GS+ FFGFNGTAGVWR+ A+E+AGGWKDRTTVEDMDLAVR L GWKF+FV DL
Sbjct: 265 QQSGSTRHAFFGFNGTAGVWRMVAMEEAGGWKDRTTVEDMDLAVRVGLLGWKFIFVNDLE 324
Query: 313 VKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIA 372
VK+ELPS FKA+R+QQHRWSCGP+NL KMT EII +RV +WK+ Y+IY+FF +RKI+
Sbjct: 325 VKSELPSQFKAFRFQQHRWSCGPANLIRKMTMEIIHNKRVKIWKKFYVIYSFFFLRKIVV 384
Query: 373 HWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVM 432
H+ T+FFYC+++PTSV +PE+ + IY+P+ ITLL+A+ TPRSF+L++FW+LFENVM
Sbjct: 385 HFFTYFFYCVILPTSVFLPEVNIPNWSTIYVPSVITLLSAIATPRSFYLVIFWVLFENVM 444
Query: 433 SLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHVLELIMGT 492
++ R K +IGL E RVNEWVVTEK G+T K L ++ +R+++ E++MG
Sbjct: 445 AMHRTKGTLIGLFEGGRVNEWVVTEKLGDTLNTK-----LLPQNGRLPKRVNLKEMMMGI 499
Query: 493 FMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVG 529
++L CA Y+ F ++YL +QA AF I G G+VG
Sbjct: 500 YILCCACYDFAFGNAFLYLYLFMQATAFLISGVGFVG 536
|
Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall (By similarity). Required for synthesis of a cell wall polysaccharide. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q84W54|CSLA1_ARATH Probable mannan synthase 1 OS=Arabidopsis thaliana GN=CSLA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 285/511 (55%), Positives = 379/511 (74%), Gaps = 11/511 (2%)
Query: 20 ISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEE 79
+ Y W R+ V++P+ +++C V+S+++F E YM VIL+VK+ ++K + YK E
Sbjct: 52 LQYLWTKTRSVVLLPVFKGLVVMCLVLSIIVFFESFYMNFVILFVKLFKRKPHKVYKWEA 111
Query: 80 MKEDLELN-KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRT 138
M+ED+E+ +YPMVL+QIPMYNEKEV++LSI A C L WPS RL+VQV+DDST+ +R
Sbjct: 112 MQEDVEVGPDNYPMVLIQIPMYNEKEVFQLSIAAICSLVWPSSRLVVQVVDDSTDPAVRE 171
Query: 139 DFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDA 198
V++E KW +G+N++ E R NRNGYKAGA+KE L + YVK C FV +FDA
Sbjct: 172 G--------VDVEIAKWQSQGINIRCERRDNRNGYKAGAMKEALTQSYVKQCDFVAVFDA 223
Query: 199 DFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSS 258
DFQP+ D+L R +P+L+ N ++ LVQARW FVNA++CLMTR+QEMSL+YHF VEQE GS+
Sbjct: 224 DFQPEPDYLIRAVPFLVHNPDVALVQARWIFVNANKCLMTRMQEMSLNYHFKVEQESGST 283
Query: 259 TCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELP 318
FFGFNGTAGVWRI A+E AGGWK RTTVEDMDLAVR L GWKFV++ DL V+NELP
Sbjct: 284 RHAFFGFNGTAGVWRISAMEAAGGWKSRTTVEDMDLAVRVGLHGWKFVYLNDLTVRNELP 343
Query: 319 STFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFF 378
S FKAYR+QQHRWSCGP+NLF KMT EII +RVS+WK+ Y+IY+FF VRK+ H++TFF
Sbjct: 344 SKFKAYRFQQHRWSCGPANLFRKMTMEIIFNKRVSIWKKFYVIYSFFFVRKVAVHFLTFF 403
Query: 379 FYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAK 438
FYCI++PTSV PEI + IY+P+ I++ + + TPRSF+L++FW+LFENVM++ R K
Sbjct: 404 FYCIIVPTSVFFPEIHIPSWSTIYVPSLISIFHTLATPRSFYLVIFWVLFENVMAMHRTK 463
Query: 439 AAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHVLELIMGTFMLYCA 498
IGLLE RVNEWVVTEK G+ K K + ++ R +R++ E+++G ++L CA
Sbjct: 464 GTCIGLLEGGRVNEWVVTEKLGDALKSKLLSRVVQ--RKSCYQRVNSKEVMVGVYILGCA 521
Query: 499 IYNLIFCQDHFFVYLLLQAGAFFIMGFGYVG 529
+Y LI+ YL LQA AFF+ GFG+VG
Sbjct: 522 LYGLIYGHTWLHFYLFLQATAFFVSGFGFVG 552
|
Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LR87|CSLAA_ARATH Probable mannan synthase 10 OS=Arabidopsis thaliana GN=CSLA10 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 613 bits (1582), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/503 (58%), Positives = 376/503 (74%), Gaps = 10/503 (1%)
Query: 28 RASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDLEL- 86
R+ IVPL + C ++SL++FIE +YM +V+LYVKV +K Y+ E M+ED+EL
Sbjct: 58 RSLFIVPLFKCLVAFCLIISLLVFIEGIYMNLVVLYVKVFERKPEKVYRWEAMQEDIELG 117
Query: 87 NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQK 146
+++YPMVLVQIPMYNEKEV +LSIGAAC L WP DRLIVQVLDDST++ ++ +
Sbjct: 118 HETYPMVLVQIPMYNEKEVLQLSIGAACRLIWPLDRLIVQVLDDSTDQTIK--------E 169
Query: 147 LVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDF 206
LV EC KW KGVN+K E R NRNGYKAGALKEG++ YVK C +VVIFDADFQP+ D+
Sbjct: 170 LVNTECAKWESKGVNIKCERRDNRNGYKAGALKEGMKHNYVKLCNYVVIFDADFQPEPDY 229
Query: 207 LWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFN 266
L ++P+L+ N E+ LVQARW+F+NA++CLMTR+QEMSL+YHF EQE GS+ FF FN
Sbjct: 230 LQHSVPFLVHNPEVALVQARWRFMNANKCLMTRMQEMSLNYHFMAEQESGSTRHAFFSFN 289
Query: 267 GTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326
GTAGVWR+ A+E+AGGW DRTTVEDMDLAVRA L GWKFVF+ DL VK+ELPS FKA+R+
Sbjct: 290 GTAGVWRMAAMEEAGGWHDRTTVEDMDLAVRAGLLGWKFVFLNDLTVKSELPSKFKAFRF 349
Query: 327 QQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPT 386
QQHRWSCGP+NLF KM EII +RV++WK+LYL+Y+FF +RKII H TF FYC+++PT
Sbjct: 350 QQHRWSCGPANLFRKMIMEIIRNKRVTIWKKLYLVYSFFFLRKIIVHCFTFIFYCVILPT 409
Query: 387 SVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAKAAIIGLLE 446
SV PE+ + YIP+ ITL + TPRSF+L++FWILFENVMS+ R K IG+LE
Sbjct: 410 SVFFPEVNIPAWSTFYIPSMITLCIVIATPRSFYLVIFWILFENVMSMHRTKGTFIGILE 469
Query: 447 ANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHVLELIMGTFMLYCAIYNLIFCQ 506
RVNEWVVTEK G+ K K + + K + ER++ E+++G ++L CA Y L F
Sbjct: 470 RQRVNEWVVTEKLGDALKTK-LLPRIGKPSNMFLERVNSKEIMVGIYILCCACYGLFFGN 528
Query: 507 DHFFVYLLLQAGAFFIMGFGYVG 529
++YL +QA AF I G G+VG
Sbjct: 529 TLLYLYLFMQAVAFLISGVGFVG 551
|
Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall (By similarity). Required for synthesis of a cell wall polysaccharide. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ZQN8|CSLA7_ARATH Probable mannan synthase 7 OS=Arabidopsis thaliana GN=CSLA7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 610 bits (1574), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/506 (56%), Positives = 384/506 (75%), Gaps = 12/506 (2%)
Query: 15 DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTE 74
D + I W IRA V+VP+ ++LC VMS+M F+E +YM IV+LYVK+ ++K
Sbjct: 42 DIIARIGLWWQLIRAVVVVPVFKFLVLLCLVMSVMFFVEVMYMGIVVLYVKLFKRKPEKF 101
Query: 75 YKLEEMKEDLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTN 133
YK E M++D+E + SYPMVLVQIPMYNEKEV + SI AAC +SWPS+R+I+QVLDDST+
Sbjct: 102 YKWEAMEDDVECGSASYPMVLVQIPMYNEKEVCEQSIAAACKISWPSNRIIIQVLDDSTD 161
Query: 134 EVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFV 193
+++LV+ EC +W ++GVN+ +E R NRNGYKAGAL+EG+ YVK C +V
Sbjct: 162 PA--------SKELVKKECDRWSKEGVNITFEIRDNRNGYKAGALREGMRHSYVKQCDYV 213
Query: 194 VIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253
IFDADFQPD DFL RT+P+L+ N +L LVQ RW+FVNA +C+MTRLQEMSL YHF++EQ
Sbjct: 214 AIFDADFQPDPDFLHRTVPFLIHNPKLALVQGRWEFVNAGQCMMTRLQEMSLSYHFTIEQ 273
Query: 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGV 313
+VGSST FFGFNGTAGVWRI A+ ++GGW D+TTVEDMDLAVRA+L+GWKF+++ DL V
Sbjct: 274 QVGSSTFAFFGFNGTAGVWRISALNESGGWNDQTTVEDMDLAVRATLRGWKFLYIDDLKV 333
Query: 314 KNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAH 373
K+ELP +FKA R QQHRW+CGP+NL KM +II E VS+WK+ Y++Y+FF +RKI+AH
Sbjct: 334 KSELPCSFKALRSQQHRWTCGPANLLRKMAGQIIRSENVSLWKKWYMLYSFFFMRKIVAH 393
Query: 374 WVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMS 433
+TF FYC+++P +VL PE+ + K A Y+P+ ITLL A+ RS HL+ FW+LFEN MS
Sbjct: 394 ILTFCFYCVILPATVLFPEVTVPKWAAFYLPSLITLLIAIGRLRSIHLLAFWVLFENAMS 453
Query: 434 LLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHVLELIMGTF 493
LLRAKA ++GL E RV EWVVTEK G+T K K I + R + ER+H+LEL++G +
Sbjct: 454 LLRAKALVMGLFETGRVQEWVVTEKLGDTLKTK-LIPQVPNVRFR--ERVHLLELLVGAY 510
Query: 494 MLYCAIYNLIFCQDHFFVYLLLQAGA 519
+L+C IY++++ ++ +VYLL Q+ A
Sbjct: 511 LLFCGIYDIVYGKNTLYVYLLFQSVA 536
|
Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall (By similarity). Required for synthesis of a cell wall polysaccharide essential for pollen tube growth, for cell wall structure, or for signaling during plant embryo development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | ||||||
| 225440071 | 526 | PREDICTED: mannan synthase 1-like [Vitis | 0.983 | 0.998 | 0.811 | 0.0 | |
| 147811344 | 529 | hypothetical protein VITISV_013215 [Viti | 0.983 | 0.992 | 0.789 | 0.0 | |
| 75128981 | 526 | RecName: Full=Mannan synthase 1; AltName | 0.985 | 1.0 | 0.765 | 0.0 | |
| 410718576 | 534 | mannan synthase [Trigonella foenum-graec | 0.983 | 0.983 | 0.764 | 0.0 | |
| 189909329 | 530 | mannan synthase [Coffea canephora] | 0.985 | 0.992 | 0.750 | 0.0 | |
| 189909331 | 530 | mannan synthase [Coffea arabica] | 0.985 | 0.992 | 0.752 | 0.0 | |
| 356503726 | 527 | PREDICTED: mannan synthase 1-like [Glyci | 0.983 | 0.996 | 0.750 | 0.0 | |
| 356570772 | 528 | PREDICTED: mannan synthase 1-like [Glyci | 0.983 | 0.994 | 0.745 | 0.0 | |
| 109628383 | 530 | cellulose synthase-like A1 [Pinus taeda] | 0.958 | 0.966 | 0.683 | 0.0 | |
| 109628385 | 534 | cellulose synthase-like A2 [Pinus taeda] | 0.979 | 0.979 | 0.677 | 0.0 |
| >gi|225440071|ref|XP_002277171.1| PREDICTED: mannan synthase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/535 (81%), Positives = 475/535 (88%), Gaps = 10/535 (1%)
Query: 1 MKNLIFQEPKERVTDG-TSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAI 59
M+NL+ QEP+ RVTD TS +SYAW IR VI PLL AI +C+ MS+MLFIERVYMAI
Sbjct: 1 MRNLVLQEPEVRVTDDVTSSLSYAWQCIRVPVIAPLLWFAIFVCAAMSIMLFIERVYMAI 60
Query: 60 VILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWP 119
+IL VKV+RKKRYT+YKL+ MKEDLELNKSYP VL+QIPMYNEKEVYKLSIGAAC +SWP
Sbjct: 61 IILCVKVMRKKRYTKYKLDTMKEDLELNKSYPKVLIQIPMYNEKEVYKLSIGAACSVSWP 120
Query: 120 SDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALK 179
SDR I+QVLDDSTNE LR +VELEC KWI+KGVNVKYETR NRNGYKAGAL+
Sbjct: 121 SDRFIIQVLDDSTNEALRV--------MVELECRKWIDKGVNVKYETRNNRNGYKAGALR 172
Query: 180 EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR 239
EGL+KQYV+DC+FV IFDADFQP+E+FLWRTIP+LLEN LGLVQARWKFVNADECLMTR
Sbjct: 173 EGLQKQYVEDCEFVAIFDADFQPEENFLWRTIPFLLENPGLGLVQARWKFVNADECLMTR 232
Query: 240 LQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS 299
LQEMSLDYHFSVEQEVGSSTC FFGFNGTAGVWRIQAI DAGGWKDRTTVEDMDLAVRAS
Sbjct: 233 LQEMSLDYHFSVEQEVGSSTCSFFGFNGTAGVWRIQAINDAGGWKDRTTVEDMDLAVRAS 292
Query: 300 LKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLY 359
LKGWKF+FVGDL VKNELPSTFKAYRYQQHRWSCGP+NLF KMT+EIILCE+VS WK+ +
Sbjct: 293 LKGWKFLFVGDLSVKNELPSTFKAYRYQQHRWSCGPANLFRKMTKEIILCEKVSTWKKFH 352
Query: 360 LIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSF 419
+IYAFF VRKIIAHWVTFFFYC+VIP SVLVPE+ L KPIAIYIPATIT LNAVCTPRS
Sbjct: 353 VIYAFFFVRKIIAHWVTFFFYCVVIPLSVLVPEVALPKPIAIYIPATITFLNAVCTPRSL 412
Query: 420 HLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQV 479
HL+VFWILFENVMSL R KAAIIGLLEANRVNEWVVTEK GN KQK N K KKSRS+V
Sbjct: 413 HLVVFWILFENVMSLHRTKAAIIGLLEANRVNEWVVTEKLGNLMKQK-NAKASKKSRSRV 471
Query: 480 GERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
GER+H+LELIMG FML+CAIYNL+F +DHFF+YL+LQAGAFFIMGFGYVG V N
Sbjct: 472 GERIHLLELIMGMFMLHCAIYNLLFREDHFFIYLILQAGAFFIMGFGYVGTFVSN 526
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147811344|emb|CAN74410.1| hypothetical protein VITISV_013215 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/538 (78%), Positives = 468/538 (86%), Gaps = 13/538 (2%)
Query: 1 MKNLIFQEPKERVTDG-TSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAI 59
M+NL+ QEP+ RVTD TS +SYAW IR VI PLL AI +C+ MS+MLFIERVYMAI
Sbjct: 1 MRNLVLQEPEVRVTDDVTSSLSYAWQCIRVPVIAPLLWFAIFVCAAMSIMLFIERVYMAI 60
Query: 60 VILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWP 119
+IL VKV+RKKRYT+YKL+ MKEDLELNKSYP VL+QIPMYNEKEVYKLSIGAAC +SWP
Sbjct: 61 IILCVKVMRKKRYTKYKLDTMKEDLELNKSYPKVLIQIPMYNEKEVYKLSIGAACSVSWP 120
Query: 120 SDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALK 179
SD I+QVLDDSTNE LR +VELEC KWI+KGVNVKYETR NRNGYKAGAL+
Sbjct: 121 SDXFIIQVLDDSTNEALRV--------MVELECRKWIDKGVNVKYETRNNRNGYKAGALR 172
Query: 180 EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR 239
EGL+KQYV+DC+FV IFDADFQP+E+FLWRTIP+LLEN LGLVQARWKFVNADECLMTR
Sbjct: 173 EGLQKQYVEDCEFVAIFDADFQPEENFLWRTIPFLLENPGLGLVQARWKFVNADECLMTR 232
Query: 240 LQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS 299
LQEMSLDYHFSVEQEVGSSTC FFGFNGTAGVWRIQAI DAGGWKDRTTVEDMDLAVRAS
Sbjct: 233 LQEMSLDYHFSVEQEVGSSTCSFFGFNGTAGVWRIQAINDAGGWKDRTTVEDMDLAVRAS 292
Query: 300 LKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLY 359
LKGWKF+FVGDL VKNELPSTFKAYRYQQHRWSCGP+NLF KMT+EIILCE V K
Sbjct: 293 LKGWKFLFVGDLSVKNELPSTFKAYRYQQHRWSCGPANLFRKMTKEIILCEANCVKKSFT 352
Query: 360 LIYA---FFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTP 416
+ + F++++KIIAHWVTFFFYC+VIP SVLVPE+ L KPIAIYIPATIT LNAVCTP
Sbjct: 353 MKKSHRTFYLLQKIIAHWVTFFFYCVVIPLSVLVPEVALPKPIAIYIPATITFLNAVCTP 412
Query: 417 RSFHLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSR 476
RS HL+VFWILFENVMSL R KAAIIGLLEANRVNEWVVTEK GN KQK N K KKSR
Sbjct: 413 RSLHLVVFWILFENVMSLHRTKAAIIGLLEANRVNEWVVTEKLGNLMKQK-NAKASKKSR 471
Query: 477 SQVGERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
S+VGER+H+LELIMG FML+CAIYNL+F +DHFF+YL+LQAGAFFIMGFGYVG V N
Sbjct: 472 SRVGERIHLLELIMGMFMLHCAIYNLLFREDHFFIYLILQAGAFFIMGFGYVGTFVSN 529
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75128981|sp|Q6UDF0.1|CSLA1_CYATE RecName: Full=Mannan synthase 1; AltName: Full=CtManS gi|38532106|gb|AAR23313.1| beta-1,4-mannan synthase [Cyamopsis tetragonoloba] gi|294874880|gb|ADF47159.1| beta-1,4-mannan synthase [Cyamopsis tetragonoloba] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/534 (76%), Positives = 461/534 (86%), Gaps = 8/534 (1%)
Query: 1 MKNLIFQEPKERVTDGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIV 60
M+NLIF+EP+ + +S + YAW SIRA VI+PLL LA+I+CSVMS+MLF+ERV MA V
Sbjct: 1 MRNLIFEEPEGIPGNSSSSLRYAWQSIRAPVIIPLLKLAVIVCSVMSIMLFVERVAMAAV 60
Query: 61 ILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPS 120
IL VKVLRKKRYT+Y LE MK+ LE +K YPMVL+QIPMYNEKEVYKLSIGA CGLSWP+
Sbjct: 61 ILIVKVLRKKRYTKYNLEAMKQKLERSKKYPMVLIQIPMYNEKEVYKLSIGAVCGLSWPA 120
Query: 121 DRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180
DR IVQVLDDSTN VLR +LVE+EC KWI+KGVNVKYE R+NRNGYKAGALKE
Sbjct: 121 DRFIVQVLDDSTNPVLR--------ELVEMECQKWIQKGVNVKYENRRNRNGYKAGALKE 172
Query: 181 GLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRL 240
GLEKQYV+DC+FV IFDADFQPD DFLW TIPYLLEN +LGLVQARWKFVN++EC+MTRL
Sbjct: 173 GLEKQYVEDCEFVAIFDADFQPDADFLWNTIPYLLENPKLGLVQARWKFVNSEECMMTRL 232
Query: 241 QEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASL 300
QEMSLDYHFSVEQEVGSST FFGFNGTAGVWRIQAI+DAGGWKDRTTVEDMDLAVRASL
Sbjct: 233 QEMSLDYHFSVEQEVGSSTYSFFGFNGTAGVWRIQAIKDAGGWKDRTTVEDMDLAVRASL 292
Query: 301 KGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYL 360
GW+FVFVGD+ VKNELPSTFKAYR+QQHRWSCGP+NLF KMT+EII C+RV + KRL+L
Sbjct: 293 HGWEFVFVGDVKVKNELPSTFKAYRFQQHRWSCGPANLFKKMTKEIICCKRVPLLKRLHL 352
Query: 361 IYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFH 420
IYAFF VRKI+AHWVTFFFYCIVIP V+VPE+ L K IAIYIPATIT+LNAV TPRS H
Sbjct: 353 IYAFFFVRKIVAHWVTFFFYCIVIPACVIVPEVNLKKQIAIYIPATITILNAVSTPRSMH 412
Query: 421 LIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVG 480
L+V WILFENVMSL R KAAIIGLLEANRVNEWVVTEK GN KQ+NN + + SR ++
Sbjct: 413 LLVLWILFENVMSLHRTKAAIIGLLEANRVNEWVVTEKLGNAMKQRNNARPSRASRFRII 472
Query: 481 ERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
ER+H LE+I+G +ML+CA Y+L+F DHFFVYLLLQAGAFF MGFG VG VP
Sbjct: 473 ERIHPLEIIVGMYMLHCATYDLLFGHDHFFVYLLLQAGAFFTMGFGLVGTIVPT 526
|
Source: Cyamopsis tetragonoloba Species: Cyamopsis tetragonoloba Genus: Cyamopsis Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|410718576|gb|AFV79650.1| mannan synthase [Trigonella foenum-graecum] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/543 (76%), Positives = 470/543 (86%), Gaps = 18/543 (3%)
Query: 1 MKNLIFQEPKERVT-DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAI 59
M+NLIF+EP+ + D +SG+ YAW SIRA VI+PLL LA+I+CS+MS+MLFIERV MA
Sbjct: 1 MRNLIFEEPEVNIPGDASSGLRYAWQSIRAPVIIPLLKLAVIICSIMSVMLFIERVGMAA 60
Query: 60 VILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWP 119
VIL VKVLR K+YT+YKL+ +K+++E N YPMVLVQIPM+NEKEVYKLSIGA CGLSWP
Sbjct: 61 VILVVKVLRWKKYTKYKLDAVKQNIERNNKYPMVLVQIPMFNEKEVYKLSIGAVCGLSWP 120
Query: 120 SDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALK 179
DRLIVQVLDDSTN+VLR +LVELEC KWIEKGVNVKYETR NRNGYKAGALK
Sbjct: 121 RDRLIVQVLDDSTNQVLR--------ELVELECHKWIEKGVNVKYETRTNRNGYKAGALK 172
Query: 180 EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR 239
EGLEKQYV+DC+FV IFDADFQPD DFLWRT+PYLLEN +LGLVQARWKFVN +EC+MTR
Sbjct: 173 EGLEKQYVEDCEFVAIFDADFQPDPDFLWRTVPYLLENPKLGLVQARWKFVNTEECIMTR 232
Query: 240 LQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS 299
LQEMSLDYHFSVEQEVGSST FFGFNGTAG+WRIQAI+DAGGWKDRTTVEDMDLAVRAS
Sbjct: 233 LQEMSLDYHFSVEQEVGSSTYSFFGFNGTAGIWRIQAIKDAGGWKDRTTVEDMDLAVRAS 292
Query: 300 LKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLY 359
LKGW+FVFVGD+ VKNELPST+KAYRYQQHRWSCGP+NL KMT+EI+ C+RVS+ KRL+
Sbjct: 293 LKGWEFVFVGDVTVKNELPSTYKAYRYQQHRWSCGPANLLKKMTKEILFCQRVSLLKRLH 352
Query: 360 LIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSF 419
LIYAFF VRKIIAHWVTFFFYCIVIP V+VPE+ LTK IAIYIPATIT+LNAV TPRS
Sbjct: 353 LIYAFFFVRKIIAHWVTFFFYCIVIPACVVVPEVSLTKKIAIYIPATITILNAVSTPRSR 412
Query: 420 HLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKK----QKNNIKTLKKS 475
HL+V WILFENVMSL R KAAIIGLLEANRVNEWVVTEK GNT K Q+NN + S
Sbjct: 413 HLLVLWILFENVMSLHRTKAAIIGLLEANRVNEWVVTEKLGNTMKQSQSQRNNARP-STS 471
Query: 476 RSQ----VGERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPS 531
RS+ + ER+H LE+I+G +ML+CAIY+L+F +DHFF+YLLLQAGAFF MGFG VG
Sbjct: 472 RSRWFRTIIERIHPLEIIVGMYMLHCAIYDLLFGRDHFFIYLLLQAGAFFTMGFGAVGTI 531
Query: 532 VPN 534
VPN
Sbjct: 532 VPN 534
|
Source: Trigonella foenum-graecum Species: Trigonella foenum-graecum Genus: Trigonella Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|189909329|gb|ACE60600.1| mannan synthase [Coffea canephora] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/538 (75%), Positives = 461/538 (85%), Gaps = 12/538 (2%)
Query: 1 MKNLIFQEPKERVT---DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYM 57
M+N +F EP+ V D +S AW+ IR +IVP+L A+ +C MS+M FIERVYM
Sbjct: 1 MRNSVFLEPEPEVNLYDDTGRSLSQAWDRIRVPIIVPILRFALYVCIAMSVMRFIERVYM 60
Query: 58 AIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLS 117
AIVI VK L +KRYT+Y L+ +KEDLE N++YPMVLVQIPM+NEKEVYKLSIGAACGLS
Sbjct: 61 AIVIGCVKCLGRKRYTKYNLDAIKEDLEQNRNYPMVLVQIPMFNEKEVYKLSIGAACGLS 120
Query: 118 WPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGA 177
WPSDRLIVQVLDDSTNEVLR LVELEC +WIEKGVNVKYETR NRNGYKAGA
Sbjct: 121 WPSDRLIVQVLDDSTNEVLRA--------LVELECQRWIEKGVNVKYETRNNRNGYKAGA 172
Query: 178 LKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLM 237
L++GL+K YV+DC+FVVIFDADFQP+EDFLWRT+PYLLEN EL LVQARWKFVNA+ECLM
Sbjct: 173 LRDGLKKPYVEDCEFVVIFDADFQPEEDFLWRTVPYLLENPELALVQARWKFVNANECLM 232
Query: 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVR 297
TRLQEM LDYHFSVEQEVGSSTC FFGFNGTAGVWRIQA+ DAGGWKDRTTVEDMDLAVR
Sbjct: 233 TRLQEMPLDYHFSVEQEVGSSTCSFFGFNGTAGVWRIQAVSDAGGWKDRTTVEDMDLAVR 292
Query: 298 ASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKR 357
ASLKGWKF+FVGDL VKNELPSTFKAYR+QQHRWSCGP+NLF KM +EI+LCERVS+WK+
Sbjct: 293 ASLKGWKFIFVGDLSVKNELPSTFKAYRFQQHRWSCGPANLFRKMFKEILLCERVSIWKK 352
Query: 358 LYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPR 417
++IYAF VRKI+AHWVTFFFYCIVIP ++LVPE+ L KPIA+Y+PATITLLNA TPR
Sbjct: 353 FHVIYAFSFVRKIVAHWVTFFFYCIVIPATILVPEVHLPKPIAVYLPATITLLNAASTPR 412
Query: 418 SFHLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNI-KTLKKSR 476
S HL+VFWILFENVMSL R+KAAIIGLLEA+RVNEW+VTEK GN KQK +I K K+ R
Sbjct: 413 SLHLLVFWILFENVMSLHRSKAAIIGLLEASRVNEWIVTEKLGNALKQKYSIPKVSKRPR 472
Query: 477 SQVGERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
S++ ER+H LELIMG +ML+CA YN+IF DHFF+YLLLQAGAFFI+G GY+G VP
Sbjct: 473 SRIAERIHFLELIMGMYMLHCAFYNMIFANDHFFIYLLLQAGAFFIIGLGYIGTIVPT 530
|
Source: Coffea canephora Species: Coffea canephora Genus: Coffea Family: Rubiaceae Order: Gentianales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|189909331|gb|ACE60601.1| mannan synthase [Coffea arabica] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/538 (75%), Positives = 460/538 (85%), Gaps = 12/538 (2%)
Query: 1 MKNLIFQEPKERVT---DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYM 57
M+N +F EP+ V D +S AW+ IR +IVP+L A+ +C MS+MLFIERVYM
Sbjct: 1 MRNSVFLEPEPEVNLYDDTGRSLSQAWDRIRVPIIVPILRFALYVCIAMSVMLFIERVYM 60
Query: 58 AIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLS 117
AIVI VK L +KRYT+Y L+ +KEDLE N++YPMVLVQIPM+NEKEVYKLSIGAACGLS
Sbjct: 61 AIVIGCVKCLGRKRYTKYNLDAIKEDLEQNRNYPMVLVQIPMFNEKEVYKLSIGAACGLS 120
Query: 118 WPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGA 177
PSDRLIVQVLDDSTNEVLR LVELEC +WIEKGVNVKYETR NRNGYKAGA
Sbjct: 121 RPSDRLIVQVLDDSTNEVLRA--------LVELECQRWIEKGVNVKYETRNNRNGYKAGA 172
Query: 178 LKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLM 237
L++GL+K YV+DC+FVVIFDADFQP+EDFLWRT+PYLLEN EL LVQARWKFVNA+ECLM
Sbjct: 173 LRDGLKKPYVEDCEFVVIFDADFQPEEDFLWRTVPYLLENPELALVQARWKFVNANECLM 232
Query: 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVR 297
TRLQEMSLDYHFSVEQEVGSSTC FFGFNGTAGVWRIQA+ DAGGWKDRTTVEDMDLAVR
Sbjct: 233 TRLQEMSLDYHFSVEQEVGSSTCSFFGFNGTAGVWRIQAVSDAGGWKDRTTVEDMDLAVR 292
Query: 298 ASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKR 357
ASLKGWKF+FVGDL VKNELPSTFKAYR+QQHRWSCGP+NLF KM +EI+LCERVS+WK+
Sbjct: 293 ASLKGWKFIFVGDLSVKNELPSTFKAYRFQQHRWSCGPANLFRKMFKEILLCERVSIWKK 352
Query: 358 LYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPR 417
++IYAFF VRKI+AHWVTFFFYCIVIP ++LVPE+ L KPIA+Y PATITLLNA TPR
Sbjct: 353 FHVIYAFFFVRKIVAHWVTFFFYCIVIPATILVPEVHLPKPIAVYPPATITLLNAASTPR 412
Query: 418 SFHLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNI-KTLKKSR 476
S HL+VFWILFENVMSL R+KAAIIGLLEA+RVNEW+VTEK GN KQK +I K K+
Sbjct: 413 SLHLLVFWILFENVMSLHRSKAAIIGLLEASRVNEWIVTEKLGNALKQKYSIPKVSKRPG 472
Query: 477 SQVGERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
S++ ER+H LELIMG +ML+CA YNLIF DHFF+Y LLQAGAFFI+G GY+G VP
Sbjct: 473 SRIAERIHFLELIMGMYMLHCAFYNLIFANDHFFIYPLLQAGAFFIIGLGYIGTIVPT 530
|
Source: Coffea arabica Species: Coffea arabica Genus: Coffea Family: Rubiaceae Order: Gentianales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356503726|ref|XP_003520655.1| PREDICTED: mannan synthase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/534 (75%), Positives = 459/534 (85%), Gaps = 9/534 (1%)
Query: 1 MKNLIFQEPKERVT-DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAI 59
M+NLIF+EP+ RV D +S + YAW SIRA VI+PLL LA+ILCS+MS+MLF+ERV MAI
Sbjct: 1 MRNLIFEEPEVRVPGDTSSSLRYAWESIRAPVIIPLLKLAVILCSIMSIMLFVERVAMAI 60
Query: 60 VILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWP 119
VIL VKVL KKRYT+Y LE MK+ LE NK +PMVL+QIPMYNEKEVYKLSIGA CGLSWP
Sbjct: 61 VILVVKVLGKKRYTKYNLEAMKQKLERNKRFPMVLIQIPMYNEKEVYKLSIGAVCGLSWP 120
Query: 120 SDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALK 179
+DR IVQVLDDSTN+ LR + V++EC +WI+KGVNVKYETR NRNGYKAGA+K
Sbjct: 121 ADRFIVQVLDDSTNQSLR--------ECVQMECQRWIQKGVNVKYETRTNRNGYKAGAMK 172
Query: 180 EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR 239
EGLEK+YV+DC++V IFDADFQPD DFLW TIPYLLEN +LGLVQARWKFVN+ EC+MT+
Sbjct: 173 EGLEKEYVEDCEYVAIFDADFQPDADFLWNTIPYLLENPKLGLVQARWKFVNSKECMMTK 232
Query: 240 LQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS 299
LQEMSLDYHFSVEQEVGSST FFGFNGTAG+WRIQAI+DAGGWKDRTTVEDMDLAVRAS
Sbjct: 233 LQEMSLDYHFSVEQEVGSSTYSFFGFNGTAGIWRIQAIKDAGGWKDRTTVEDMDLAVRAS 292
Query: 300 LKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLY 359
L+GW+FVFVGD+ VKNELPSTFKAYRYQQHRWSCGP+NLF KMT EI+ C RV + KRL+
Sbjct: 293 LQGWEFVFVGDIKVKNELPSTFKAYRYQQHRWSCGPANLFKKMTMEILYCHRVPLLKRLH 352
Query: 360 LIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSF 419
L+YAFF VRKI+AHWVTFFFYCIVIP V+VPE+ L K IAIYIPATIT+LNAV TPRS
Sbjct: 353 LVYAFFFVRKIVAHWVTFFFYCIVIPACVIVPEVSLKKQIAIYIPATITILNAVSTPRSM 412
Query: 420 HLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQV 479
HL+V WILFENVMSL R KAAIIGLLEANRVNEWVVTEK GN KQ+ N K + S ++
Sbjct: 413 HLLVLWILFENVMSLHRTKAAIIGLLEANRVNEWVVTEKLGNAMKQRKNAKPSRTSWFRI 472
Query: 480 GERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVP 533
+R+H LE+I+G +ML+CAIY+L+F DHFF+YLLLQAGAFF MGFG VG VP
Sbjct: 473 IDRIHPLEIIVGMYMLHCAIYDLLFGHDHFFIYLLLQAGAFFTMGFGQVGTIVP 526
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356570772|ref|XP_003553558.1| PREDICTED: mannan synthase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/535 (74%), Positives = 457/535 (85%), Gaps = 10/535 (1%)
Query: 1 MKNLIFQEPKERVT-DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAI 59
M+NLIF+EP+ RV D +S + YAW SIRA VI+P+L LA+ILCS+MS+MLF+ERV MAI
Sbjct: 1 MRNLIFEEPEVRVPGDTSSSLRYAWESIRAPVIIPVLKLAVILCSIMSIMLFVERVAMAI 60
Query: 60 VILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWP 119
VIL VKVL KKRYT+Y LE MK+ LE NK +PMVL+QIPMYNEKEVYKLSIGA CGLSWP
Sbjct: 61 VILVVKVLGKKRYTKYNLEAMKQKLERNKRFPMVLIQIPMYNEKEVYKLSIGAVCGLSWP 120
Query: 120 SDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALK 179
+DR IVQVLDDSTN+ LR + V++EC +W++KGVNVKYETR NRNGYKAGA+K
Sbjct: 121 ADRFIVQVLDDSTNQSLR--------ECVQIECQRWMQKGVNVKYETRTNRNGYKAGAMK 172
Query: 180 EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR 239
EGLEK+YV+DC+FV IFDADFQPD DFLW TIPYLLEN +LGLVQARWKFVN+ EC+MTR
Sbjct: 173 EGLEKEYVEDCEFVAIFDADFQPDADFLWNTIPYLLENPKLGLVQARWKFVNSKECMMTR 232
Query: 240 LQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS 299
LQEMSLDYHFSVEQEVGSST FFGFNGTAG+WRIQAI+DAGGWKDRTTVEDMDLAVRAS
Sbjct: 233 LQEMSLDYHFSVEQEVGSSTYSFFGFNGTAGIWRIQAIKDAGGWKDRTTVEDMDLAVRAS 292
Query: 300 LKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTRE-IILCERVSVWKRL 358
L+GW+FVFVGD+ VKNELPSTFKAYRYQQHRWSCGP+NLF KMT E I RV + KRL
Sbjct: 293 LQGWEFVFVGDIKVKNELPSTFKAYRYQQHRWSCGPANLFKKMTMESSIAMYRVPLLKRL 352
Query: 359 YLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRS 418
+L+YAFF VRKI+AHWVTFFFYCIVIP V+VPE+ L K IAIYIPATIT+LNAV TPRS
Sbjct: 353 HLVYAFFFVRKIVAHWVTFFFYCIVIPACVIVPEVSLKKQIAIYIPATITILNAVSTPRS 412
Query: 419 FHLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQ 478
HL+V WILFENVMSL R KAAIIGLLEANRVNEWVVTEK GN KQ+ N + + S +
Sbjct: 413 MHLLVLWILFENVMSLHRTKAAIIGLLEANRVNEWVVTEKLGNAMKQRKNARPSRTSWFR 472
Query: 479 VGERLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVP 533
+ +R+H LE+I+G +ML+CAIY+L+F DHFF+YLLLQAGAFF MGFG VG VP
Sbjct: 473 IIDRVHPLEIIVGMYMLHCAIYDLLFGHDHFFIYLLLQAGAFFTMGFGQVGTIVP 527
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|109628383|gb|ABG34547.1| cellulose synthase-like A1 [Pinus taeda] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/522 (68%), Positives = 428/522 (81%), Gaps = 10/522 (1%)
Query: 14 TDGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYT 73
D T ++ W IRA +I PLL A+ +C +MSLMLFIERVYMA+VI+ VK+ K+
Sbjct: 17 NDMTEQLALIWRQIRAPLIAPLLRFAVGICLIMSLMLFIERVYMAVVIVLVKLFGKRPEK 76
Query: 74 EYKLEEMKEDLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDST 132
YK E +++D+EL N +YPMVLVQIPMYNEKEVY+LSIGAACGLSWPSDR+I+QVLDDST
Sbjct: 77 RYKWEPIRDDIELGNSAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRIIIQVLDDST 136
Query: 133 NEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQF 192
+ ++ +LV +EC +W KG+N+KYE R NRNGYKAGALKEG+++ YVKDC +
Sbjct: 137 DPAIK--------ELVTMECQRWASKGINIKYEIRDNRNGYKAGALKEGMKRSYVKDCDY 188
Query: 193 VVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252
V IFDADFQP+ D+LWRT+P+L+ N EL LVQARWKFVN+DECLMTR+QEMSLDYHF+VE
Sbjct: 189 VAIFDADFQPEPDYLWRTVPFLVHNPELALVQARWKFVNSDECLMTRMQEMSLDYHFTVE 248
Query: 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312
QEVGSST FFGFNGTAGVWRI A+ +AGGWKDRTTVEDMDLAVRASLKGWKFVFVGDL
Sbjct: 249 QEVGSSTHAFFGFNGTAGVWRINALNEAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLK 308
Query: 313 VKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIA 372
VKNELPSTFKAYRYQQHRWSCGP+NLF KM EI+ +RV+ WK+ ++IYAFF VRKI+A
Sbjct: 309 VKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEILRNKRVTPWKKFHVIYAFFFVRKIVA 368
Query: 373 HWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVM 432
H VTF FYC+VIP +VLVPE+Q+ K A+YIP+ ITLLNAV TP+S HL+VFWILFENVM
Sbjct: 369 HIVTFTFYCVVIPATVLVPEVQVPKWGAVYIPSIITLLNAVSTPKSLHLLVFWILFENVM 428
Query: 433 SLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGERLHVLELIMGT 492
SL R KA IGLLEA RVNEWVVTEK G+ K K+ K +KKSRS++GERLHVLEL G
Sbjct: 429 SLHRTKATFIGLLEAGRVNEWVVTEKLGDAMKHKSG-KQIKKSRSRIGERLHVLELFAGV 487
Query: 493 FMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
++ +CA Y+L F ++HF++YL LQA AFF+MGFGY+G VP
Sbjct: 488 YLFFCASYDLAFGRNHFYIYLYLQAAAFFVMGFGYIGTFVPT 529
|
Source: Pinus taeda Species: Pinus taeda Genus: Pinus Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|109628385|gb|ABG34548.1| cellulose synthase-like A2 [Pinus taeda] | Back alignment and taxonomy information |
|---|
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/533 (67%), Positives = 433/533 (81%), Gaps = 10/533 (1%)
Query: 3 NLIFQEPKERVTDGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVIL 62
N++ Q + D I+ W IRA ++ PLL++ I C +MS+MLFIERVYMA+VI+
Sbjct: 10 NILPQTFQGTRDDIVEQIALLWQQIRAPLVAPLLNICIYFCLLMSVMLFIERVYMAVVIV 69
Query: 63 YVKVLRKKRYTEYKLEEMKEDLELNKS-YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSD 121
+K+ KK YK +KED+EL S YPMVLVQIPMYNE+EVY+LSIGAAC LSWPS+
Sbjct: 70 LIKLFGKKPEKRYKWGAIKEDVELGNSVYPMVLVQIPMYNEREVYQLSIGAACALSWPSN 129
Query: 122 RLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEG 181
R+I+QVLDDST+ ++ LVE+EC KW KG+N+KYE R NRNGYKAGALKEG
Sbjct: 130 RVIIQVLDDSTDLTIK--------DLVEMECQKWASKGINIKYEIRGNRNGYKAGALKEG 181
Query: 182 LEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ 241
++ YV++C +VVIFDADFQPD DFL RTIP+L+ N EL LVQARWKFVNADECLMTR+Q
Sbjct: 182 MKHSYVRECDYVVIFDADFQPDRDFLSRTIPFLVHNPELALVQARWKFVNADECLMTRMQ 241
Query: 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLK 301
EMSLDYHF+VEQEVGS+T FFGFNGTAGVWRI+A+ +AGGWKDRTTVEDMDLAVRASL+
Sbjct: 242 EMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIKALNEAGGWKDRTTVEDMDLAVRASLR 301
Query: 302 GWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLI 361
GWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGP+NLF KM REII ++VS WK+ ++I
Sbjct: 302 GWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPANLFRKMVREIIANKKVSAWKKFHVI 361
Query: 362 YAFFIVRKIIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHL 421
Y FF VRKI+AH VTF FYC+VIPT+VLVPE+QL K A+YIP+TITLLNAV TPRS HL
Sbjct: 362 YGFFFVRKIVAHIVTFVFYCVVIPTTVLVPEVQLPKWGAVYIPSTITLLNAVSTPRSLHL 421
Query: 422 IVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKKQKNNIKTLKKSRSQVGE 481
+VFWILFENVMSL R KA IIGL EA RVNEWVVTEK G+ K K K +K+S+S++GE
Sbjct: 422 LVFWILFENVMSLHRTKATIIGLFEAGRVNEWVVTEKLGDALKHKTA-KQMKRSQSRIGE 480
Query: 482 RLHVLELIMGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
R+HVLE++ G ++ +CA Y+L F ++HF++YL LQAGAFFIMGFGY+G VP
Sbjct: 481 RIHVLEVLTGVYLFFCASYDLAFGKNHFYIYLFLQAGAFFIMGFGYIGTFVPT 533
|
Source: Pinus taeda Species: Pinus taeda Genus: Pinus Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | ||||||
| TAIR|locus:2144638 | 533 | ATCSLA09 [Arabidopsis thaliana | 0.958 | 0.960 | 0.633 | 2.5e-184 | |
| TAIR|locus:2162494 | 534 | CSLA02 "cellulose synthase-lik | 0.951 | 0.951 | 0.592 | 8e-172 | |
| TAIR|locus:2028862 | 556 | CSLA03 "cellulose synthase-lik | 0.960 | 0.922 | 0.603 | 7.2e-171 | |
| TAIR|locus:2142100 | 537 | ATCSLA15 [Arabidopsis thaliana | 0.940 | 0.934 | 0.562 | 1.5e-163 | |
| TAIR|locus:2058729 | 556 | CSLA07 "cellulose synthase lik | 0.934 | 0.897 | 0.565 | 3.5e-162 | |
| TAIR|locus:2130844 | 553 | CSLA01 "cellulose synthase-lik | 0.936 | 0.904 | 0.553 | 5.3e-159 | |
| TAIR|locus:2199917 | 552 | CSLA10 "cellulose synthase-lik | 0.930 | 0.900 | 0.576 | 1.1e-158 | |
| TAIR|locus:2181382 | 443 | CSLA11 "cellulose synthase lik | 0.825 | 0.995 | 0.609 | 5.2e-152 | |
| TAIR|locus:2082083 | 535 | CSLA14 "cellulose synthase lik | 0.945 | 0.943 | 0.545 | 3.7e-151 | |
| TAIR|locus:2089730 | 673 | CSLC04 "Cellulose-synthase-lik | 0.799 | 0.634 | 0.489 | 7.9e-112 |
| TAIR|locus:2144638 ATCSLA09 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1788 (634.5 bits), Expect = 2.5e-184, P = 2.5e-184
Identities = 330/521 (63%), Positives = 409/521 (78%)
Query: 15 DGTSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTE 74
D T +S + IRA +IVP L L + +C MS+MLF+ERVYM IVI VK+ +K
Sbjct: 20 DITMQMSMVLDQIRAPLIVPALRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKR 79
Query: 75 YKLEEMKEDLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTN 133
+K E +K+D+EL N +YPMVL+QIPM+NE+EVY+LSIGAACGLSWPSDR+++QVLDDST+
Sbjct: 80 FKYEPIKDDIELGNSAYPMVLIQIPMFNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTD 139
Query: 134 EVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFV 193
++ LVE+EC +W KGVN+KYE R NRNGYKAGALKEG++K YVK C +V
Sbjct: 140 PTIKD--------LVEMECSRWASKGVNIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYV 191
Query: 194 VIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253
IFDADFQP+ DFLWRT+PYLL N +L LVQARWKFVN+DECLMTR+QEMSLDYHF+VEQ
Sbjct: 192 AIFDADFQPEADFLWRTVPYLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQ 251
Query: 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGV 313
EVGSST FFGFNGTAG+WRI A+ +AGGWKDRTTVEDMDLAVRASLKGWKF+++G L V
Sbjct: 252 EVGSSTYAFFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKV 311
Query: 314 KNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAH 373
KNELPSTFKAYRYQQHRWSCGP+NLF KM EI+ + V++WK++++IY+FF+VRK++AH
Sbjct: 312 KNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNKNVTLWKKVHVIYSFFVVRKLVAH 371
Query: 374 WVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMS 433
VTF FYC+++P +VLVPE+ + K A+YIP+ ITLLNAV TPRS HL+VFWILFENVMS
Sbjct: 372 IVTFIFYCVILPATVLVPEVTVPKWGAVYIPSVITLLNAVGTPRSLHLMVFWILFENVMS 431
Query: 434 LLRAKAAIIGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELIMGTF 493
L R KA IGLLE RVNEW+VTEK G R + G+R+HVLEL +G +
Sbjct: 432 LHRTKATFIGLLEGGRVNEWIVTEKLGDVKAKSATKTSKKVIRFRFGDRIHVLELGVGMY 491
Query: 494 MLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
+L+ Y+ F ++H+++YL QA AFFI GFG +G VPN
Sbjct: 492 LLFVGCYDAFFGKNHYYLYLFAQAIAFFIAGFGQIGTIVPN 532
|
|
| TAIR|locus:2162494 CSLA02 "cellulose synthase-like A02" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1670 (592.9 bits), Expect = 8.0e-172, P = 8.0e-172
Identities = 310/523 (59%), Positives = 402/523 (76%)
Query: 17 TSGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYK 76
T + W ++A VIVPLL LA+ +C +MS+ML ERVYM IVI+ VK+ KK YK
Sbjct: 22 TGQLGMIWELVKAPVIVPLLQLAVYICLLMSVMLLCERVYMGIVIVLVKLFWKKPDKRYK 81
Query: 77 LEEMKEDLELNKS-YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEV 135
E + +D EL S +P+VLVQIPM+NE+EVYKLSIGAACGLSWPSDRL++QVLDDST+
Sbjct: 82 FEPIHDDEELGSSNFPVVLVQIPMFNEREVYKLSIGAACGLSWPSDRLVIQVLDDSTDPT 141
Query: 136 LRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVI 195
++ ++VE+EC +W KG+N++Y+ R+NR GYKAGALKEGL++ YVK C++VVI
Sbjct: 142 VK--------QMVEVECQRWASKGINIRYQIRENRVGYKAGALKEGLKRSYVKHCEYVVI 193
Query: 196 FDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEV 255
FDADFQP+ DFL R+IP+L+ N + LVQARW+FVN+DECL+TR+QEMSLDYHF+VEQEV
Sbjct: 194 FDADFQPEPDFLRRSIPFLMHNPNIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEV 253
Query: 256 GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKN 315
GSST FFGFNGTAG+WRI AI +AGGWKDRTTVEDMDLAVRASL+GWKF+++GDL VK+
Sbjct: 254 GSSTHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKS 313
Query: 316 ELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWV 375
ELPSTF+A+R+QQHRWSCGP+NLF KM EI+ ++V WK++Y+IY+FF VRKIIAHWV
Sbjct: 314 ELPSTFRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHWV 373
Query: 376 TFFFYCIVIPTSVLVPEIQLTKPI--AIYIPATITLLNAVCTPRSFHLIVFWILFENVMS 433
TF FYC+V+P ++LVPE+++ PI ++YIP+ IT+LN+V TPRS HL+ +WILFENVMS
Sbjct: 374 TFCFYCVVLPLTILVPEVKV--PIWGSVYIPSIITILNSVGTPRSIHLLFYWILFENVMS 431
Query: 434 LLRAKAAIIGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRS--QVGERLHVLELIMG 491
L R KA +IGL EA R NEWVVT K G ++ +RL+ LEL
Sbjct: 432 LHRTKATLIGLFEAGRANEWVVTAKLGSGQSAKGNTKGIKRFPRIFKLPDRLNTLELGFA 491
Query: 492 TFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
F+ C Y+ + ++++F+YL LQ +FFI G G++G VP+
Sbjct: 492 AFLFVCGCYDFVHGKNNYFIYLFLQTMSFFISGLGWIGTYVPS 534
|
|
| TAIR|locus:2028862 CSLA03 "cellulose synthase-like A3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1661 (589.8 bits), Expect = 7.2e-171, P = 7.2e-171
Identities = 316/524 (60%), Positives = 388/524 (74%)
Query: 13 VTDGTSG-ISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKR 71
V G G I Y W R V +P+L + +C VMSL+LFIERVYM+IV+++VK+LR+
Sbjct: 39 VRSGIIGEIIYIWKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVVVFVKLLRRTP 98
Query: 72 YTEYKLEEMKED-LEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLD 129
+K E + +D LEL N +YPMVL+QIPMYNEKEV +LSIGAAC LSWP DR+IVQVLD
Sbjct: 99 EKVHKWEPINDDDLELANTNYPMVLIQIPMYNEKEVCQLSIGAACRLSWPLDRMIVQVLD 158
Query: 130 DSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKD 189
DST+ +++LV EC KW KG+N+ E R NR GYKAGALK G+ YVK
Sbjct: 159 DSTDPA--------SKELVNAECDKWARKGINIMSEIRDNRIGYKAGALKAGMMHNYVKQ 210
Query: 190 CQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHF 249
C+FV IFDADFQPD DFL RTIP+L+ N E+ LVQ RWKFVNA+ECLMTR+QEMSL+YHF
Sbjct: 211 CEFVAIFDADFQPDPDFLERTIPFLIHNHEISLVQCRWKFVNANECLMTRMQEMSLNYHF 270
Query: 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVG 309
EQE GSS FFGFNGTAGVWRI A+ +AGGWKDRTTVEDMDLAVRA L GWKFV+V
Sbjct: 271 VAEQESGSSIHAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRACLHGWKFVYVH 330
Query: 310 DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRK 369
D+ VKNELPSTFKAYR+QQHRWSCGP+NL+ KMT EI+ ++VS WK+LYLIY FF +RK
Sbjct: 331 DVEVKNELPSTFKAYRFQQHRWSCGPANLWRKMTMEILQNKKVSAWKKLYLIYNFFFIRK 390
Query: 370 IIAHWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFE 429
I+ H TF FYC+++PT+VL PE+Q+ K +Y P TIT+LNA+ TPRS HL+VFWILFE
Sbjct: 391 IVVHIFTFVFYCLILPTTVLFPELQVPKWATVYFPTTITILNAIATPRSLHLLVFWILFE 450
Query: 430 NVMSLLRAKAAIIGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELI 489
NVMS+ R KA IGLLEA RVNEWVVTEK G ++ G+RL+ EL+
Sbjct: 451 NVMSMHRTKATFIGLLEAGRVNEWVVTEKLGDTLKSKLIGKATTKLYTRFGQRLNWRELV 510
Query: 490 MGTFMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVP 533
+G ++ +C Y+ + +F+VYL LQ+ AFF+ G GY+G VP
Sbjct: 511 VGLYIFFCGCYDFAYGGSYFYVYLFLQSCAFFVAGVGYIGTFVP 554
|
|
| TAIR|locus:2142100 ATCSLA15 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1592 (565.5 bits), Expect = 1.5e-163, P = 1.5e-163
Identities = 291/517 (56%), Positives = 383/517 (74%)
Query: 15 DGTS-GISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYT 73
DG +S W R IVPL +++C ++SL++F+E VYM +V+LYVK+ +K
Sbjct: 33 DGVGINMSTMWRETRNVFIVPLFKCIVVMCLIISLLVFVESVYMNLVVLYVKLFNRKPEK 92
Query: 74 EYKLEEMKEDLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDST 132
YK E M+ED+EL +++YPMVLVQIPMYNE+EV++LSIGAAC L+WPSDRLIVQVLDDST
Sbjct: 93 VYKWEAMQEDMELGHQNYPMVLVQIPMYNEREVFELSIGAACRLTWPSDRLIVQVLDDST 152
Query: 133 NEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQF 192
+ + +LV +EC KW K +N+ YE R+NRNGYKAGALK G+ YVK CQ+
Sbjct: 153 DPAI--------MELVSMECTKWASKDININYERRENRNGYKAGALKHGMRHSYVKQCQY 204
Query: 193 VVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252
+ IFDADFQP+ D+L R IP+L+ N E+ LVQARW+FVNA+ CLMTR+QEMSL+YHF E
Sbjct: 205 LAIFDADFQPEPDYLQRAIPFLIHNPEVALVQARWRFVNANTCLMTRMQEMSLNYHFMAE 264
Query: 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312
Q+ GS+ FFGFNGTAGVWR+ A+E+AGGWKDRTTVEDMDLAVR L GWKF+FV DL
Sbjct: 265 QQSGSTRHAFFGFNGTAGVWRMVAMEEAGGWKDRTTVEDMDLAVRVGLLGWKFIFVNDLE 324
Query: 313 VKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIA 372
VK+ELPS FKA+R+QQHRWSCGP+NL KMT EII +RV +WK+ Y+IY+FF +RKI+
Sbjct: 325 VKSELPSQFKAFRFQQHRWSCGPANLIRKMTMEIIHNKRVKIWKKFYVIYSFFFLRKIVV 384
Query: 373 HWVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVM 432
H+ T+FFYC+++PTSV +PE+ + IY+P+ ITLL+A+ TPRSF+L++FW+LFENVM
Sbjct: 385 HFFTYFFYCVILPTSVFLPEVNIPNWSTIYVPSVITLLSAIATPRSFYLVIFWVLFENVM 444
Query: 433 SLLRAKAAIIGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELIMGT 492
++ R K +IGL E RVNEWVVTEK G ++ +R+++ E++MG
Sbjct: 445 AMHRTKGTLIGLFEGGRVNEWVVTEKLGDTLNTKLLP-----QNGRLPKRVNLKEMMMGI 499
Query: 493 FMLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVG 529
++L CA Y+ F ++YL +QA AF I G G+VG
Sbjct: 500 YILCCACYDFAFGNAFLYLYLFMQATAFLISGVGFVG 536
|
|
| TAIR|locus:2058729 CSLA07 "cellulose synthase like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1579 (560.9 bits), Expect = 3.5e-162, P = 3.5e-162
Identities = 289/511 (56%), Positives = 385/511 (75%)
Query: 24 WNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKED 83
W IRA V+VP+ ++LC VMS+M F+E +YM IV+LYVK+ ++K YK E M++D
Sbjct: 51 WQLIRAVVVVPVFKFLVLLCLVMSVMFFVEVMYMGIVVLYVKLFKRKPEKFYKWEAMEDD 110
Query: 84 LELNK-SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQ 142
+E SYPMVLVQIPMYNEKEV + SI AAC +SWPS+R+I+QVLDDST+
Sbjct: 111 VECGSASYPMVLVQIPMYNEKEVCEQSIAAACKISWPSNRIIIQVLDDSTDPA------- 163
Query: 143 YTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQP 202
+++LV+ EC +W ++GVN+ +E R NRNGYKAGAL+EG+ YVK C +V IFDADFQP
Sbjct: 164 -SKELVKKECDRWSKEGVNITFEIRDNRNGYKAGALREGMRHSYVKQCDYVAIFDADFQP 222
Query: 203 DEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQF 262
D DFL RT+P+L+ N +L LVQ RW+FVNA +C+MTRLQEMSL YHF++EQ+VGSST F
Sbjct: 223 DPDFLHRTVPFLIHNPKLALVQGRWEFVNAGQCMMTRLQEMSLSYHFTIEQQVGSSTFAF 282
Query: 263 FGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFK 322
FGFNGTAGVWRI A+ ++GGW D+TTVEDMDLAVRA+L+GWKF+++ DL VK+ELP +FK
Sbjct: 283 FGFNGTAGVWRISALNESGGWNDQTTVEDMDLAVRATLRGWKFLYIDDLKVKSELPCSFK 342
Query: 323 AYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCI 382
A R QQHRW+CGP+NL KM +II E VS+WK+ Y++Y+FF +RKI+AH +TF FYC+
Sbjct: 343 ALRSQQHRWTCGPANLLRKMAGQIIRSENVSLWKKWYMLYSFFFMRKIVAHILTFCFYCV 402
Query: 383 VIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAKAAII 442
++P +VL PE+ + K A Y+P+ ITLL A+ RS HL+ FW+LFEN MSLLRAKA ++
Sbjct: 403 ILPATVLFPEVTVPKWAAFYLPSLITLLIAIGRLRSIHLLAFWVLFENAMSLLRAKALVM 462
Query: 443 GLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELIMGTFMLYCAIYNL 502
GL E RV EWVVTEK G + ER+H+LEL++G ++L+C IY++
Sbjct: 463 GLFETGRVQEWVVTEKLGDTLKTKLIPQV---PNVRFRERVHLLELLVGAYLLFCGIYDI 519
Query: 503 IFCQDHFFVYLLLQAGAFFIMGFGYVGPSVP 533
++ ++ +VYLL Q+ AFF++GFG+VG VP
Sbjct: 520 VYGKNTLYVYLLFQSVAFFVVGFGFVGKYVP 550
|
|
| TAIR|locus:2130844 CSLA01 "cellulose synthase-like A01" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1549 (550.3 bits), Expect = 5.3e-159, P = 5.3e-159
Identities = 283/511 (55%), Positives = 373/511 (72%)
Query: 20 ISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEE 79
+ Y W R+ V++P+ +++C V+S+++F E YM VIL+VK+ ++K + YK E
Sbjct: 52 LQYLWTKTRSVVLLPVFKGLVVMCLVLSIIVFFESFYMNFVILFVKLFKRKPHKVYKWEA 111
Query: 80 MKEDLELNK-SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRT 138
M+ED+E+ +YPMVL+QIPMYNEKEV++LSI A C L WPS RL+VQV+DDST+ +R
Sbjct: 112 MQEDVEVGPDNYPMVLIQIPMYNEKEVFQLSIAAICSLVWPSSRLVVQVVDDSTDPAVRE 171
Query: 139 DFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDA 198
V++E KW +G+N++ E R NRNGYKAGA+KE L + YVK C FV +FDA
Sbjct: 172 G--------VDVEIAKWQSQGINIRCERRDNRNGYKAGAMKEALTQSYVKQCDFVAVFDA 223
Query: 199 DFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSS 258
DFQP+ D+L R +P+L+ N ++ LVQARW FVNA++CLMTR+QEMSL+YHF VEQE GS+
Sbjct: 224 DFQPEPDYLIRAVPFLVHNPDVALVQARWIFVNANKCLMTRMQEMSLNYHFKVEQESGST 283
Query: 259 TCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELP 318
FFGFNGTAGVWRI A+E AGGWK RTTVEDMDLAVR L GWKFV++ DL V+NELP
Sbjct: 284 RHAFFGFNGTAGVWRISAMEAAGGWKSRTTVEDMDLAVRVGLHGWKFVYLNDLTVRNELP 343
Query: 319 STFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFF 378
S FKAYR+QQHRWSCGP+NLF KMT EII +RVS+WK+ Y+IY+FF VRK+ H++TFF
Sbjct: 344 SKFKAYRFQQHRWSCGPANLFRKMTMEIIFNKRVSIWKKFYVIYSFFFVRKVAVHFLTFF 403
Query: 379 FYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAK 438
FYCI++PTSV PEI + IY+P+ I++ + + TPRSF+L++FW+LFENVM++ R K
Sbjct: 404 FYCIIVPTSVFFPEIHIPSWSTIYVPSLISIFHTLATPRSFYLVIFWVLFENVMAMHRTK 463
Query: 439 AAIIGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELIMGTFMLYCA 498
IGLLE RVNEWVVTEK G R +R++ E+++G ++L CA
Sbjct: 464 GTCIGLLEGGRVNEWVVTEKLGDALKSKLLSRVV--QRKSCYQRVNSKEVMVGVYILGCA 521
Query: 499 IYNLIFCQDHFFVYLLLQAGAFFIMGFGYVG 529
+Y LI+ YL LQA AFF+ GFG+VG
Sbjct: 522 LYGLIYGHTWLHFYLFLQATAFFVSGFGFVG 552
|
|
| TAIR|locus:2199917 CSLA10 "cellulose synthase-like A10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1546 (549.3 bits), Expect = 1.1e-158, P = 1.1e-158
Identities = 293/508 (57%), Positives = 372/508 (73%)
Query: 24 WN-SIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKE 82
W R+ IVPL + C ++SL++FIE +YM +V+LYVKV +K Y+ E M+E
Sbjct: 53 WTREFRSLFIVPLFKCLVAFCLIISLLVFIEGIYMNLVVLYVKVFERKPEKVYRWEAMQE 112
Query: 83 DLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFF 141
D+EL +++YPMVLVQIPMYNEKEV +LSIGAAC L WP DRLIVQVLDDST++ ++
Sbjct: 113 DIELGHETYPMVLVQIPMYNEKEVLQLSIGAACRLIWPLDRLIVQVLDDSTDQTIK---- 168
Query: 142 QYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ 201
+LV EC KW KGVN+K E R NRNGYKAGALKEG++ YVK C +VVIFDADFQ
Sbjct: 169 ----ELVNTECAKWESKGVNIKCERRDNRNGYKAGALKEGMKHNYVKLCNYVVIFDADFQ 224
Query: 202 PDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQ 261
P+ D+L ++P+L+ N E+ LVQARW+F+NA++CLMTR+QEMSL+YHF EQE GS+
Sbjct: 225 PEPDYLQHSVPFLVHNPEVALVQARWRFMNANKCLMTRMQEMSLNYHFMAEQESGSTRHA 284
Query: 262 FFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTF 321
FF FNGTAGVWR+ A+E+AGGW DRTTVEDMDLAVRA L GWKFVF+ DL VK+ELPS F
Sbjct: 285 FFSFNGTAGVWRMAAMEEAGGWHDRTTVEDMDLAVRAGLLGWKFVFLNDLTVKSELPSKF 344
Query: 322 KAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYC 381
KA+R+QQHRWSCGP+NLF KM EII +RV++WK+LYL+Y+FF +RKII H TF FYC
Sbjct: 345 KAFRFQQHRWSCGPANLFRKMIMEIIRNKRVTIWKKLYLVYSFFFLRKIIVHCFTFIFYC 404
Query: 382 IVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAKAAI 441
+++PTSV PE+ + YIP+ ITL + TPRSF+L++FWILFENVMS+ R K
Sbjct: 405 VILPTSVFFPEVNIPAWSTFYIPSMITLCIVIATPRSFYLVIFWILFENVMSMHRTKGTF 464
Query: 442 IGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELIMGTFMLYCAIYN 501
IG+LE RVNEWVVTEK G S + ER++ E+++G ++L CA Y
Sbjct: 465 IGILERQRVNEWVVTEKLGDALKTKLLPRIGKPSNMFL-ERVNSKEIMVGIYILCCACYG 523
Query: 502 LIFCQDHFFVYLLLQAGAFFIMGFGYVG 529
L F ++YL +QA AF I G G+VG
Sbjct: 524 LFFGNTLLYLYLFMQAVAFLISGVGFVG 551
|
|
| TAIR|locus:2181382 CSLA11 "cellulose synthase like A11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
Identities = 275/451 (60%), Positives = 343/451 (76%)
Query: 80 MKEDLEL-NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRT 138
M+EDLEL N+++PMVLVQIPMYNE+EV+KLSIGAAC L WP DRLIVQVLDDST+ +
Sbjct: 1 MQEDLELGNQNFPMVLVQIPMYNEREVFKLSIGAACRLIWPLDRLIVQVLDDSTDPTI-- 58
Query: 139 DFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDA 198
++V EC KW KG+N+K E R NRNGYKAGALK+G+ YVK C ++ IFDA
Sbjct: 59 ------MEMVSTECGKWATKGINIKCERRDNRNGYKAGALKQGMRHSYVKTCTYIAIFDA 112
Query: 199 DFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSS 258
DFQP+ D+L RT+P+L+ N EL LVQARWKFVNA +CLMTR+QEMSL+YHF+ EQE GS+
Sbjct: 113 DFQPEPDYLERTVPFLIHNPELALVQARWKFVNAKKCLMTRMQEMSLNYHFTAEQESGST 172
Query: 259 TCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELP 318
FFGFNGTAGVWR+ A+E+AGGWKDRTTVEDMDLAVR L GWKFVFV D+ VK+ELP
Sbjct: 173 RHAFFGFNGTAGVWRLAAMEEAGGWKDRTTVEDMDLAVRVGLHGWKFVFVNDVSVKSELP 232
Query: 319 STFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFF 378
S FKA+R+QQHRWSCGP+NLF KMT EII +RV++WK+LY+IY+FF VRKII H+ TFF
Sbjct: 233 SQFKAFRFQQHRWSCGPANLFRKMTMEIIRNKRVTIWKKLYVIYSFFFVRKIIVHFFTFF 292
Query: 379 FYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAK 438
FYC ++PTSV PE+ + +Y P ITL NA+ TPRSF+L++FW+LFENVM++ R K
Sbjct: 293 FYCFILPTSVFFPEVNIPTWSTVYFPFMITLFNAIATPRSFYLVIFWVLFENVMAMHRTK 352
Query: 439 AAIIGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELIMGTFMLYCA 498
IGLLE RVNEWVVTEK G R+ ER++ E+++G ++L CA
Sbjct: 353 GTFIGLLEGGRVNEWVVTEKLGDALETKLLPQVRK-PRNGFLERINSKEMMVGIYILCCA 411
Query: 499 IYNLIFCQDHFFVYLLLQAGAFFIMGFGYVG 529
YNL+F + ++YL +QA AF I G G++G
Sbjct: 412 SYNLVFGKTVLYIYLYMQALAFIIAGIGFIG 442
|
|
| TAIR|locus:2082083 CSLA14 "cellulose synthase like A14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 284/521 (54%), Positives = 376/521 (72%)
Query: 20 ISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEE 79
I Y R +VP+L + LC V+S++LF++ YMAIV+ VK+L + K E
Sbjct: 18 IGYVLEQTRFIFLVPILKRLVNLCQVVSVLLFVDAAYMAIVVAIVKLLGRTPQKVLKWES 77
Query: 80 MK-EDLEL--NKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVL 136
K +D+EL + ++PMVL+QIP++NEKEV +LSIGAAC LSWP DR+I+QVLDDST E
Sbjct: 78 FKSDDIELAPSSNHPMVLIQIPIFNEKEVCQLSIGAACKLSWPLDRMIIQVLDDSTEEE- 136
Query: 137 RTDFFQYTQKLVELECLKWIEKGVNVKYETRKN-RNGYKAGALKEGLEKQYVKD--CQFV 193
+QKLV LEC KW +G+ +K E R R G+KAGAL G++ YV + C+FV
Sbjct: 137 -------SQKLVRLECKKWESEGITIKSEVRGGFREGFKAGALTAGMKHSYVDEYKCEFV 189
Query: 194 VIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253
VIFDADFQP+ DFL RT+P+L+ N E+ LVQA WK+ NADEC MTR+QEMSL+YHF+VEQ
Sbjct: 190 VIFDADFQPEPDFLERTVPFLVHNPEIALVQAGWKYGNADECCMTRIQEMSLNYHFAVEQ 249
Query: 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGV 313
+ GSS FFGFNGTAGVWRI+A+ +A GWKDRT VEDMDLAVRA L+G KFV+V D+ V
Sbjct: 250 KSGSSILGFFGFNGTAGVWRIKALNEAEGWKDRTIVEDMDLAVRAYLRGSKFVYVDDVKV 309
Query: 314 KNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAH 373
KNELPS+F+AYR+QQHRWSCGP+NLF K+ EII + VS+WK++YLIY FF +RKI+ H
Sbjct: 310 KNELPSSFQAYRFQQHRWSCGPANLFKKIAMEIIKNQNVSLWKKVYLIYNFFFLRKIVVH 369
Query: 374 WVTFFFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMS 433
TF FYC+++P +V+ PEI++ K IYIPATIT+LNA+ TP+SF+LI++WILFENVM+
Sbjct: 370 IFTFVFYCVILPATVIFPEIEVPKWTTIYIPATITILNAIATPKSFYLILYWILFENVMA 429
Query: 434 LLRAKAAIIGLLEANRVNEWVVTEKHGXXXXXXXXXXXXXXSRSQVGERLHVLELIMGTF 493
+ R+ +IGLLE +RV EW+VT+K G ERL E+++G +
Sbjct: 430 MHRSIGTLIGLLETSRVKEWIVTQKLGESNNLRENLIFP--DHYSFPERLRWREIMVGMY 487
Query: 494 MLYCAIYNLIFCQDHFFVYLLLQAGAFFIMGFGYVGPSVPN 534
+ C Y+ +F + + +VYL LQ+ AFF++G GYVG VP+
Sbjct: 488 LFICGYYDFVFGRTYLYVYLFLQSIAFFVVGVGYVGMPVPS 528
|
|
| TAIR|locus:2089730 CSLC04 "Cellulose-synthase-like C4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 216/441 (48%), Positives = 295/441 (66%)
Query: 21 SY-AWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEE 79
SY AW S R+ I PL+ C+V+ L+ ++R+ + + ++K KK E KL E
Sbjct: 132 SYMAWLSFRSDYIAPLVISLSRFCTVLFLIQSLDRLVLCLGCFWIKF--KK--IEPKLTE 187
Query: 80 MKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTD 139
DLE S+PMVL+QIPM NE+EVY+ SIGAA L WP DR+++QVLDDS + L
Sbjct: 188 ESIDLEDPSSFPMVLIQIPMCNEREVYEQSIGAASQLDWPKDRILIQVLDDSDDPNL--- 244
Query: 140 FFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDAD 199
Q L++ E W EKGVN+ Y R R GYKAG LK + YVKD +FV IFDAD
Sbjct: 245 -----QLLIKEEVSVWAEKGVNIIYRHRLIRTGYKAGNLKSAMTCDYVKDYEFVTIFDAD 299
Query: 200 FQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSST 259
F P+ DFL +T+P+ N ELGLVQARW FVN DE L+TRLQ ++L +HF VEQ+V
Sbjct: 300 FTPNPDFLKKTVPHFKGNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVF 359
Query: 260 CQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319
FFGFNGTAGVWRI+A+E++GGW +RTTVEDMD+AVRA L GWKF+++ D+ V ELP
Sbjct: 360 LNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIYLNDVEVTCELPE 419
Query: 320 TFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFF 379
+++AY+ QQHRW GP LF ++ I+ ++SVWK+ LI+ FF++RK+I + +F
Sbjct: 420 SYEAYKKQQHRWHSGPMQLF-RLCLPSIIKSKISVWKKANLIFLFFLLRKLILPFYSFTL 478
Query: 380 YCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAKA 439
+CI++P ++ +PE +L I Y+P I+LLN + +P+SF +V ++LFEN MS+ + A
Sbjct: 479 FCIILPLTMFIPEAELPLWIICYVPIFISLLNILPSPKSFPFLVPYLLFENTMSITKFNA 538
Query: 440 AIIGLLEANRVNEWVVTEKHG 460
I GL + EWVVT+K G
Sbjct: 539 MISGLFQFGSAYEWVVTKKTG 559
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LZR3 | CSLA9_ARATH | 2, ., 4, ., 1, ., 3, 2 | 0.6372 | 0.9588 | 0.9606 | yes | no |
| Q6UDF0 | CSLA1_CYATE | 2, ., 4, ., 1, ., - | 0.7659 | 0.9850 | 1.0 | N/A | no |
| Q7PC76 | CSLA1_ORYSJ | 2, ., 4, ., 1, ., 3, 2 | 0.6168 | 0.9569 | 0.9808 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 534 | |||
| cd06437 | 232 | cd06437, CESA_CaSu_A2, Cellulose synthase catalyti | 1e-135 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 2e-34 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 8e-31 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 1e-27 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 8e-26 | |
| cd06435 | 236 | cd06435, CESA_NdvC_like, NdvC_like proteins in thi | 9e-25 | |
| pfam13641 | 229 | pfam13641, Glyco_tranf_2_3, Glycosyltransferase li | 9e-24 | |
| pfam13632 | 194 | pfam13632, Glyco_trans_2_3, Glycosyl transferase f | 2e-18 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 8e-14 | |
| cd06427 | 241 | cd06427, CESA_like_2, CESA_like_2 is a member of t | 1e-12 | |
| pfam13506 | 171 | pfam13506, Glyco_transf_21, Glycosyl transferase f | 3e-08 | |
| pfam00535 | 168 | pfam00535, Glycos_transf_2, Glycosyl transferase f | 1e-07 | |
| PRK11204 | 420 | PRK11204, PRK11204, N-glycosyltransferase; Provisi | 2e-07 | |
| PRK14583 | 444 | PRK14583, hmsR, N-glycosyltransferase; Provisional | 6e-07 | |
| TIGR03937 | 407 | TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glu | 4e-05 | |
| cd06439 | 251 | cd06439, CESA_like_1, CESA_like_1 is a member of t | 5e-05 | |
| COG1216 | 305 | COG1216, COG1216, Predicted glycosyltransferases [ | 3e-04 | |
| cd00761 | 156 | cd00761, Glyco_tranf_GTA_type, Glycosyltransferase | 4e-04 |
| >gnl|CDD|133059 cd06437, CESA_CaSu_A2, Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
Score = 391 bits (1007), Expect = e-135
Identities = 130/245 (53%), Positives = 164/245 (66%), Gaps = 13/245 (5%)
Query: 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVEL 150
PMV VQ+P++NEK V + I AAC L +P DRL +QVLDDST+E + E+
Sbjct: 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDET--------VRLAREI 52
Query: 151 ECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210
+GVN+K+ R +R GYKAGAL EG++ V ++V IFDADF P DFL +T
Sbjct: 53 VEEYA-AQGVNIKHVRRADRTGYKAGALAEGMK---VAKGEYVAIFDADFVPPPDFLQKT 108
Query: 211 IPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAG 270
PY + +LG VQ RW +NA+ L+TR+Q MSLDYHF++EQ SST FF FNGTAG
Sbjct: 109 PPYF-ADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAG 167
Query: 271 VWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHR 330
VWR + IEDAGGW T ED+DL+ RA LKGWKFV++ D+ V ELP++ AYR QQHR
Sbjct: 168 VWRKECIEDAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHR 227
Query: 331 WSCGP 335
WS GP
Sbjct: 228 WSKGP 232
|
Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. Length = 232 |
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 2e-34
Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 27/255 (10%)
Query: 91 PMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVE 149
P V V IP YNE E+ + ++ AA + +P D+L V VLDD LR L
Sbjct: 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRA--------LAA 52
Query: 150 LECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWR 209
+++ +Y TR + KAG L L FV I DAD P DFL R
Sbjct: 53 ELGVEY-----GYRYLTRPDNRHAKAGNLNNALAHT---TGDFVAILDADHVPTPDFLRR 104
Query: 210 TIPYLLENKELGLVQARWKFVNADECL-----MTRLQEMSLDYHFSVEQEVGSSTCQFFG 264
T+ Y L++ ++ LVQ F N D QE+ ++ ++ F
Sbjct: 105 TLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQEL---FYGVIQPGRDRWGAAFCC 161
Query: 265 FNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAY 324
G+ V R +A+++ GG+ + ED+ ++R KGW+ V+V + P T AY
Sbjct: 162 --GSGAVVRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAY 219
Query: 325 RYQQHRWSCGPSNLF 339
Q+ RW+ G +
Sbjct: 220 IKQRLRWARGMLQIL 234
|
Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. Length = 234 |
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 8e-31
Identities = 97/424 (22%), Positives = 162/424 (38%), Gaps = 38/424 (8%)
Query: 35 LLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVL 94
LL L ++ L++ + +L V L + R K + K P V
Sbjct: 6 LLELVFWGLILILLLILSIITLLLGYLLLVLPLSRPRKKLPKDAD--------KLLPKVS 57
Query: 95 VQIPMYNE-KEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECL 153
V IP YNE EV + ++ + +P +IV V D ST+E + L EL
Sbjct: 58 VIIPAYNEEPEVLEETLESLLSQDYPRYEVIV-VDDGSTDETY--------EILEEL--- 105
Query: 154 KWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY 213
E G N + + +NG KAGAL GL++ VVI DAD P+ D L +
Sbjct: 106 -GAEYGPNFRVIYPEKKNGGKAGALNNGLKRA---KGDVVVILDADTVPEPDALRELVSP 161
Query: 214 LLENKELGLVQARWKFVNAD-ECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVW 272
+ +V D L+ R+Q + F S +G++ +
Sbjct: 162 FEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAF 221
Query: 273 RIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWS 332
R A+E+ GGW + T ED DL +R L+G++ V+V + V E P T K Q+ RW+
Sbjct: 222 RRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWRQRLRWA 281
Query: 333 CGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPE 392
G + L +S ++ + L+++ + ++ S++
Sbjct: 282 RGGLQVLLLHPYLPALFRPLSGYRFILLLFSLLL----------PLLLTLLFLLSIIPSL 331
Query: 393 IQLTKPIAIYIPATITLLNAVCTPRSFHLIVFWILFENVMSLLRAKAAIIGLLEANRVNE 452
+ + + + +L A + LF + + L A V
Sbjct: 332 LLILLSGLLALLLANVILAAFL--LILLIPPLLALFALLQLGVFLVTTKGLRLIAKLVVY 389
Query: 453 WVVT 456
+V
Sbjct: 390 LLVI 393
|
Length = 439 |
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-27
Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 45 VMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEK- 103
+ +L + +Y +I IL + + R + + D E +P V V IP YNE
Sbjct: 89 IFGTLLLLAELY-SITILLLGYFQTVRPLDRTPVPLPLDPE---EWPTVDVFIPTYNEDL 144
Query: 104 EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVEL-ECLKWIEKGVNV 162
E+ ++ AA + +P+D+ V +LDD + R D + + E LK + + V
Sbjct: 145 EIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGV 204
Query: 163 KYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGL 222
Y TR KAG + L+ D + ++IFDAD P DFL RT+ + +E+ +L L
Sbjct: 205 NYITRPRNVHAKAGNINNALKHT---DGELILIFDADHVPTRDFLQRTVGWFVEDPKLFL 261
Query: 223 VQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFG-------------FNGTA 269
VQ FV+ D ++ + + + + F+G F G+A
Sbjct: 262 VQTPHFFVSPD----------PIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSA 311
Query: 270 GVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQH 329
V R +A+++ GG T ED + A++ +GW ++ + P T + Q+
Sbjct: 312 AVLRREALDEIGGIAGETVTEDAETALKLHRRGWNSAYLDRPLIAGLAPETLSGHIGQRI 371
Query: 330 RWSCGPSNLFSKMTREIILCERVSVWKRL-YLIYAFF 365
RW+ G +F +L +S +RL YL F
Sbjct: 372 RWAQGMMQIF--RLDNPLLKRGLSFPQRLCYLNAMLF 406
|
Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. Length = 713 |
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 8e-26
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLK 154
+ +P YNE+ V + +I + L +P +IV V D ST++ L +
Sbjct: 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIV-VDDGSTDDTLE-------------ILEE 46
Query: 155 WIEKGVNVKYETRKNRNGYKAGALKEGLEK-QYVKDCQFVVIFDADFQPDEDFLWRTIPY 213
+ R NG KAGAL GL + VV+ DAD + D L R +
Sbjct: 47 LAALYIRRVLVVRDKENGGKAGALNAGLRHAKG----DIVVVLDADTILEPDALKRLVVP 102
Query: 214 LLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWR 273
+ ++G VQ R + N E L+TRLQ + F + + S+ +G G +R
Sbjct: 103 FFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFR 162
Query: 274 IQAIEDAGGWKDRTTVED 291
+A+ + GGW + T ED
Sbjct: 163 REALREVGGWDEDTLTED 180
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. Length = 180 |
| >gnl|CDD|133057 cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 9e-25
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 16/248 (6%)
Query: 95 VQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECL 153
+ +P Y E E+ K ++ + L +P+ +IV +D++T + + K VE C
Sbjct: 2 IHVPCYEEPPEMVKETLDSLAALDYPNFEVIV--IDNNTKD-------EALWKPVEAHCA 52
Query: 154 KWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY 213
+ G ++ + G KAGAL LE+ D + + + DAD+Q + D+L R +P
Sbjct: 53 ---QLGERFRFFHVEPLPGAKAGALNYALERTAP-DAEIIAVIDADYQVEPDWLKRLVPI 108
Query: 214 LLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWR 273
++ +G VQA + + +E L R+ F + + +GT + R
Sbjct: 109 F-DDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNERNAII-QHGTMCLIR 166
Query: 274 IQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSC 333
A++D GGW + ED +L +R G+ V+V +P TF+A++ Q+ RW+
Sbjct: 167 RSALDDVGGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWAY 226
Query: 334 GPSNLFSK 341
G + K
Sbjct: 227 GAVQILKK 234
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. Length = 236 |
| >gnl|CDD|222281 pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2 | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 9e-24
Identities = 66/248 (26%), Positives = 102/248 (41%), Gaps = 23/248 (9%)
Query: 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVEL 150
P V V +P +NE +V ++ + +P +IV V+D S +E L D + EL
Sbjct: 1 PRVAVVVPTWNEDKVLGRTLRSILAQDYPRLEVIV-VVDGSDDETL--DVAR------EL 51
Query: 151 ECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210
+ + V+V R KA AL E L VV+ DAD D D L R
Sbjct: 52 AA-AYPDVRVHVVRRPRPPGPTGKARALNEALR---AIKSDLVVLLDADSVVDPDTLRRL 107
Query: 211 IPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAG 270
+P+ +K +G VQ FV + L + + + G AG
Sbjct: 108 LPFF-LSKGVGAVQG-PVFVLNLRTAVAPLYALEFALRHLRFMALRRA----LGVAPLAG 161
Query: 271 ---VWRIQAIEDAGGWKDRTTV-EDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326
++R +E+ GG+ + ED +L +R GW+ +V V PS+ A+
Sbjct: 162 SGSLFRRSVLEEIGGFDPGFLLGEDKELGLRLRRAGWRTAYVPGAAVYELSPSSLAAFIK 221
Query: 327 QQHRWSCG 334
Q+ RW G
Sbjct: 222 QRTRWVYG 229
|
Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 229 |
| >gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 2e-18
Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 192 FVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ--EMSLDYHF 249
++++ DAD D L R I L+ + E+ L+Q N + RL E + D+
Sbjct: 1 WILLLDADTVLPPDCL-RLIANLMLSPEVALIQGPVTPRNVRN-WLERLADLEFAEDHGK 58
Query: 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVG 309
G+ ++R A+++ GG+ + + ED D A+R G++ FV
Sbjct: 59 DRLFREALGGVLPS--VGSGALFRRSALQEVGGFDESSVSEDFDFALRLRRAGYRVRFVP 116
Query: 310 DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRK 369
+ GV + P TF+ + Q+ RW+ G + R + + +W L L ++
Sbjct: 117 ESGVYEKSPPTFRDFLRQRLRWAYGILEQGILLVRRLGWLRLL-LWSYLPLRLLLLLLSS 175
Query: 370 IIAHWVTFFFYCIVI 384
+ + + ++
Sbjct: 176 LSSLALLLLLLALLA 190
|
Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis. Length = 194 |
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 8e-14
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 44/231 (19%)
Query: 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQK 146
+P V + +P YNE V K +I A+ G+ WP D+L + +LDD R +F Q+ Q+
Sbjct: 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGG----REEFRQFAQE 312
Query: 147 LVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDF 206
V VKY R KAG + L+ +FV IFD D P F
Sbjct: 313 -------------VGVKYIARPTHEHAKAGNINNALK---YAKGEFVAIFDCDHVPTRSF 356
Query: 207 LWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFG-- 264
L T+ + L++K+L ++Q F + D E +L E G+ F+G
Sbjct: 357 LQMTMGWFLKDKKLAMMQTPHHFFSPDPF------ERNLGRFRKTPNE-GT---LFYGLV 406
Query: 265 -----------FNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWK 304
F G+ V R + +++ GG T ED ++R +G+
Sbjct: 407 QDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYT 457
|
Length = 852 |
| >gnl|CDD|133049 cd06427, CESA_like_2, CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 17/242 (7%)
Query: 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVEL 150
P+ + +P+Y E EV I + L +P +L V++L + +E T
Sbjct: 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEE--------TIAAARA 52
Query: 151 ECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210
L I + V V + K A L + + ++VVI+DA+ PD D L +
Sbjct: 53 LRLPSIFRVVVVPPSQPRT----KPKACNYAL--AFARG-EYVVIYDAEDAPDPDQLKKA 105
Query: 211 -IPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTA 269
+ + +L VQA + NA E +TR+ + F + GT+
Sbjct: 106 VAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTS 165
Query: 270 GVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQH 329
+R + + GGW ED DL +R + G++ V + E + + Q+
Sbjct: 166 NHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYR-TGVLNSTTLEEANNALGNWIRQRS 224
Query: 330 RW 331
RW
Sbjct: 225 RW 226
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Length = 241 |
| >gnl|CDD|222183 pfam13506, Glyco_transf_21, Glycosyl transferase family 21 | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 3e-08
Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 10/144 (6%)
Query: 192 FVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSV 251
+VI D+D + D+L + L + ++GLV + L+ L+ V
Sbjct: 34 LLVISDSDVRVPPDYLRELLAPL-ADPKVGLVTGPP-YGADRRGFAAALEAAFLNTLAGV 91
Query: 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGG---WKDRTTVEDMDLAVRASLKGWKFVFV 308
Q + G + R +A+E GG D ED L G + V
Sbjct: 92 LQALAGLGF----AVGMSMALRREALERIGGFEALADYLA-EDYALGKALRAAGLRVVLS 146
Query: 309 GDLGVKNELPSTFKAYRYQQHRWS 332
+ TF+A+ +Q RW+
Sbjct: 147 PRPVEQPSGRRTFRAFMARQLRWA 170
|
This is a family of ceramide beta-glucosyltransferases - EC:2.4.1.80. Length = 171 |
| >gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 1e-07
Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 19/177 (10%)
Query: 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI 156
IP YNE++ + ++ + ++ + +IV V D ST+ T ++ E ++
Sbjct: 4 IPTYNEEKYLEETLESLLNQTYKNFEIIV-VDDGSTDG---------TVEIAE----EYA 49
Query: 157 EKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216
+ V+ + G KA A GL+ ++ DAD + D+L + + L +
Sbjct: 50 KNDPRVRVIRLEENLG-KAAARNAGLK--LATG-DYIAFLDADDEVAPDWLEKLVELLEK 105
Query: 217 NKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWR 273
N +V +N + L R L F A R
Sbjct: 106 N-GADIVIGSRVVINGETRLYGRALRFELLLLLGKLGARSLGLKVLFLIGSNALYRR 161
|
Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168 |
| >gnl|CDD|236882 PRK11204, PRK11204, N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 82/394 (20%), Positives = 146/394 (37%), Gaps = 71/394 (18%)
Query: 44 SVMSLMLFIERVYMAI------VILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQI 97
++ +F +M+I + Y R E ++KE YP V + +
Sbjct: 8 ELLLNFVFFYPFFMSILWIVGGLYFYFLRERHWPLGENPPAQLKE-------YPGVSILV 60
Query: 98 PMYNEKEVYKLSIGAACGLSWPSDRLIVQVLD---DSTNEVLRTDFFQYTQKLVELECLK 154
P YNE E + +I L +P+ +I + D D+T E+L + ++ L +
Sbjct: 61 PCYNEGENVEETISHLLALRYPNYEVIA-INDGSSDNTGEILD----RLAAQIPRLRVI- 114
Query: 155 WIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214
N KA AL G +++V D D D D + +
Sbjct: 115 ------------HLAENQGKANALNTGAA---AARSEYLVCIDGDALLDPDAAAYMVEHF 159
Query: 215 LENKELGLVQARWKFVNADECLMTRLQ--EMSLDYHFSVEQEVGS--STCQFFG-FNGTA 269
L N +G V + N L+ R+Q E S S+ +G + +G +
Sbjct: 160 LHNPRVGAVTGNPRIRNRST-LLGRIQVGEFS-----SI---IGLIKRAQRVYGRVFTVS 210
Query: 270 GV---WRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326
GV +R A+ + G W ED+D++ + L+GW + +P T K
Sbjct: 211 GVITAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDIRYEPRALCWILMPETLKGLWK 270
Query: 327 QQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPT 386
Q+ RW+ G + + K R + + +W L+ Y I+ W Y +++
Sbjct: 271 QRLRWAQGGAEVLLKNFRRLWRWKNRRMWP-LFFEYILSIL------WA----YTMLLIL 319
Query: 387 SVLVPEIQLTKPIAIYIPA------TITLLNAVC 414
+ + + P I + + + LL C
Sbjct: 320 LLWLIGQLVPLPPNIEVYSFSLPHWSGILLTFTC 353
|
Length = 420 |
| >gnl|CDD|184755 PRK14583, hmsR, N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 6e-07
Identities = 72/361 (19%), Positives = 142/361 (39%), Gaps = 43/361 (11%)
Query: 40 IILCSVMSL-----MLFIERVYMAIVILYVKVLRK-----------KRYTEYKLEEMKED 83
+ILC V+S+ +LF V + V Y + +R + +
Sbjct: 9 LILCLVLSIPAGMILLFTGDVLLNFVFFYPLFMSGIWITGGVYFWLRRERHWPWGDDVPA 68
Query: 84 LELNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQY 143
EL K +P+V + +P +NE + +I AA ++ + +I + D S+++ +
Sbjct: 69 PEL-KGHPLVSILVPCFNEGLNARETIHAALAQTYTNIEVIA-INDGSSDDTAQ------ 120
Query: 144 TQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPD 203
L+ L + + V + N KA AL+ G +++V D D D
Sbjct: 121 -----VLDALLAEDPRLRVIHLAH---NQGKAIALRMGAA---AARSEYLVCIDGDALLD 169
Query: 204 EDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFF 263
++ + + L+ N G V + + L+ R+Q + + Q F
Sbjct: 170 KNAVPYLVAPLIANPRTGAVTGNPR-IRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVF 228
Query: 264 GFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKA 323
+G +R +A+ D G W ED+D++ + LK W F +P T +
Sbjct: 229 TVSGVVAAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFEPRGLCWILMPETLRG 288
Query: 324 YRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIV 383
Q+ RW+ G + +F K ++ +R++L++ + + W + + I
Sbjct: 289 LWKQRLRWAQGGAEVFLKNMFKLWRWR----NRRMWLLFLEYSLSIT---WAFTYLFSIT 341
Query: 384 I 384
+
Sbjct: 342 L 342
|
Length = 444 |
| >gnl|CDD|188452 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glucosamine synthase | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 82/398 (20%), Positives = 153/398 (38%), Gaps = 82/398 (20%)
Query: 46 MSLMLFIERVYMAIV----ILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYN 101
+ +F ++M+I +Y ++++ + D YP V + +P YN
Sbjct: 1 LFNFVFFYPLFMSIYWIVGGVYYYFHWERKWPLPRTPPPPLD-----EYPGVSILVPCYN 55
Query: 102 EKEVYKLSIGAACGLSWPSDRLIVQVLD---DSTNEVLRTDFFQYTQ-KLVELECLKWIE 157
E + +I L +P+ +I + D D+T E+L Q + +++ L
Sbjct: 56 EGANVEETISHLLALRYPNFEIIA-INDGSKDNTAEILDRLAAQDPRLRVIHLA------ 108
Query: 158 KGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLEN 217
N KA AL GL +++V D D D D + + + L N
Sbjct: 109 ------------ENQGKANALNTGLL---AAKYEYLVCIDGDALLDPDAAYWMVEHFLSN 153
Query: 218 KELGLVQARWKFVNADECLMTRLQ--EMSLDYHFSVEQEVGS--STCQFFG-FNGTAGV- 271
+G V + N ++ ++Q E S S+ +G + +G +GV
Sbjct: 154 PRVGAVTGNPRIRNRST-ILGKIQVGEFS-----SI---IGLIKRAQRVYGTIFTVSGVI 204
Query: 272 --WRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNE--------LPSTF 321
+R A+ D G W ED+D++ + L GW + E +P T
Sbjct: 205 TAFRKSALHDVGYWSTDMITEDIDISWKLQLAGWNIRY--------EPRALCWILMPETL 256
Query: 322 KAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWK----RLYLIYAFFIVRKIIAHWVTF 377
+ Q+ RW+ G + E++L +W+ RL+ + +IV I A+ V
Sbjct: 257 RGLWKQRLRWAQGGA--------EVLLKYFRQLWRWRNRRLWPLLFEYIVSVIWAYSVLL 308
Query: 378 FFYCIVIPTSVLVPEIQLTKPIAIYIPATITLLNAVCT 415
+ + ++P L I+++ + LL +C
Sbjct: 309 LL-ILWLIQVNILPYTPLVYSISLFQW-SGLLLTFICL 344
|
Members of this protein family are biofilm-forming enzymes that polymerize N-acetyl-D-glucosamine residues in beta(1,6) linkage. One named members is IcaA (intercellular adhesin protein A), an enzyme that acts (with aid of subunit IcaD) in Polysaccharide Intercellular Adhesin (PIA) biosynthesis in Staphylococcus epidermis). The homologous member in E. coli is designated PgaC. Members are often encoded next to a polysaccharide deacetylase and involved in biofilm formation. Note that chitin, although also made from N-acetylglucosamine, is formed with beta-1,4 linkages. Length = 407 |
| >gnl|CDD|133061 cd06439, CESA_like_1, CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 5e-05
Identities = 63/257 (24%), Positives = 93/257 (36%), Gaps = 63/257 (24%)
Query: 88 KSYPMVLVQIPMYNEKEVY--KL-SIGAACGLSWPSDRL-IVQVLDDS---TNEVLRTDF 140
P V + IP YNE+ V KL ++ A L +P DRL I+ V D S T E+ R
Sbjct: 26 AYLPTVTIIIPAYNEEAVIEAKLENLLA---LDYPRDRLEIIVVSDGSTDGTAEIAR--- 79
Query: 141 FQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIF-DAD 199
++ +KGV + R G KA AL L + +V+F DA+
Sbjct: 80 -------------EYADKGVKLLRF--PERRG-KAAALNRAL-ALATGE---IVVFTDAN 119
Query: 200 FQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC---------LMTRLQEMSLDYHFS 250
D D L R + + +G V V+ L+
Sbjct: 120 ALLDPDAL-RLLVRHFADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRA------- 171
Query: 251 VEQEVGSSTCQFFGFNGTAGVWRIQAI--EDAGGWKDRTTVEDMDLAVRASLKGWKFVFV 308
E +GS+ G NG I AI E T +D L +R + +G++ V+
Sbjct: 172 -ESRLGSTV----GANGA-----IYAIRRELFRPLPADTINDDFVLPLRIARQGYRVVYE 221
Query: 309 GDLGVKNELPSTFKAYR 325
D E+
Sbjct: 222 PDAVAYEEVAEDGSEEF 238
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Length = 251 |
| >gnl|CDD|224137 COG1216, COG1216, Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 60/312 (19%), Positives = 105/312 (33%), Gaps = 53/312 (16%)
Query: 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTN---EVLRTDFFQYTQ 145
S P + + I YN E + + ++P D ++V V + ST+ E L+ FF
Sbjct: 1 SMPKISIIIVTYNRGEDLVECLASLAAQTYPDDVIVV-VDNGSTDGSLEALKARFFP--- 56
Query: 146 KLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDED 205
NV+ G+ AG G++ K +V++ + D + D
Sbjct: 57 ---------------NVRLIENGENLGF-AGGFNRGIKYALAKGDDYVLLLNPDTVVEPD 100
Query: 206 FLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMS-----------LDYHFSVEQE 254
L + E+ G+V N DE L + + +
Sbjct: 101 LLEELLKAAEEDPAAGVVGP--LIRNYDESL--YIDRRGGESDGLTGGWRASPLLEIAPD 156
Query: 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDL- 311
+ S +G + R +A E GG+ +R ED+DL +RA G+K +V D
Sbjct: 157 LSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAI 216
Query: 312 -----GVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVW--KRLYLIYAF 364
G Y + + F+K+ + +L L + A
Sbjct: 217 IYHKIGSSKGSSILGTFYYHLRRNRI-----YFAKLNEKGLLLRSPLRLILAFLRCLRAL 271
Query: 365 FIVRKIIAHWVT 376
+ + A
Sbjct: 272 GVAIFLKALKKF 283
|
Length = 305 |
| >gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 18/131 (13%)
Query: 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI 156
IP YNE+ + + + ++P+ +IV V D ST+ L ++
Sbjct: 3 IPAYNEEPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTLE-------------ILEEYA 48
Query: 157 EKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216
+K V N A A GL+ ++++ DAD D+L R + LL
Sbjct: 49 KKDPRVIR-VINEENQGLAAARNAGLKA---ARGEYILFLDADDLLLPDWLERLVAELLA 104
Query: 217 NKELGLVQARW 227
+ E V
Sbjct: 105 DPEADAVGGPG 115
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 100.0 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 100.0 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 100.0 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 100.0 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 100.0 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 100.0 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 100.0 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 100.0 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 100.0 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 100.0 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 100.0 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.97 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.97 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.97 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.97 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 99.97 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.96 | |
| PLN02195 | 977 | cellulose synthase A | 99.96 | |
| PLN02189 | 1040 | cellulose synthase | 99.96 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.96 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 99.96 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 99.95 | |
| PLN02400 | 1085 | cellulose synthase | 99.95 | |
| PLN02190 | 756 | cellulose synthase-like protein | 99.95 | |
| PLN02436 | 1094 | cellulose synthase A | 99.94 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 99.94 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 99.93 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.93 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.93 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.92 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.92 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.9 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 99.89 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.89 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.89 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 99.89 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.89 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 99.89 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.88 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 99.88 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.88 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 99.88 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 99.88 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 99.88 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.88 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 99.87 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 99.85 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 99.84 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 99.83 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.82 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 99.82 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 99.81 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 99.79 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 99.78 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 99.78 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 99.77 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 99.75 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 99.74 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 99.73 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 99.72 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 99.65 | |
| KOG2978 | 238 | consensus Dolichol-phosphate mannosyltransferase [ | 99.63 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 99.5 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 99.4 | |
| KOG3737 | 603 | consensus Predicted polypeptide N-acetylgalactosam | 99.37 | |
| KOG3738 | 559 | consensus Predicted polypeptide N-acetylgalactosam | 99.36 | |
| KOG3736 | 578 | consensus Polypeptide N-acetylgalactosaminyltransf | 99.26 | |
| KOG2977 | 323 | consensus Glycosyltransferase [General function pr | 99.22 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 99.09 | |
| PF13712 | 217 | Glyco_tranf_2_5: Glycosyltransferase like family; | 98.9 | |
| cd00899 | 219 | b4GalT Beta-4-Galactosyltransferase is involved in | 98.72 | |
| PF03452 | 269 | Anp1: Anp1; InterPro: IPR005109 The members of thi | 98.1 | |
| COG4092 | 346 | Predicted glycosyltransferase involved in capsule | 97.85 | |
| PF09488 | 381 | Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas | 97.67 | |
| PF03071 | 434 | GNT-I: GNT-I family; InterPro: IPR004139 The biosy | 97.64 | |
| KOG3588 | 494 | consensus Chondroitin synthase 1 [Carbohydrate tra | 97.62 | |
| PRK14503 | 393 | mannosyl-3-phosphoglycerate synthase; Provisional | 97.59 | |
| TIGR02460 | 381 | osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | 97.57 | |
| PF05679 | 499 | CHGN: Chondroitin N-acetylgalactosaminyltransferas | 97.36 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.07 | |
| KOG3916 | 372 | consensus UDP-Gal:glucosylceramide beta-1,4-galact | 97.03 | |
| PF02709 | 78 | Glyco_transf_7C: N-terminal domain of galactosyltr | 96.87 | |
| PF13704 | 97 | Glyco_tranf_2_4: Glycosyl transferase family 2 | 96.81 | |
| PF11316 | 234 | Rhamno_transf: Putative rhamnosyl transferase ; In | 96.6 | |
| PF03214 | 348 | RGP: Reversibly glycosylated polypeptide; InterPro | 96.05 | |
| PF06306 | 347 | CgtA: Beta-1,4-N-acetylgalactosaminyltransferase ( | 95.74 | |
| KOG1413 | 411 | consensus N-acetylglucosaminyltransferase I [Carbo | 95.69 | |
| PF11397 | 343 | GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP | 95.12 | |
| PF01644 | 163 | Chitin_synth_1: Chitin synthase; InterPro: IPR0048 | 94.52 | |
| PF01762 | 195 | Galactosyl_T: Galactosyltransferase; InterPro: IPR | 94.17 | |
| TIGR03584 | 222 | PseF pseudaminic acid CMP-transferase. The sequenc | 94.0 | |
| PF13733 | 136 | Glyco_transf_7N: N-terminal region of glycosyl tra | 93.82 | |
| PLN02917 | 293 | CMP-KDO synthetase | 93.64 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 93.44 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 93.11 | |
| PF09258 | 247 | Glyco_transf_64: Glycosyl transferase family 64 do | 92.88 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 92.54 | |
| KOG4179 | 568 | consensus Lysyl hydrolase/glycosyltransferase fami | 91.99 | |
| COG1212 | 247 | KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase | 91.78 | |
| PF02434 | 252 | Fringe: Fringe-like; InterPro: IPR003378 The Notch | 91.62 | |
| PF11735 | 241 | CAP59_mtransfer: Cryptococcal mannosyltransferase | 90.92 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 89.74 | |
| cd00218 | 223 | GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) | 89.43 | |
| PF04666 | 297 | Glyco_transf_54: N-Acetylglucosaminyltransferase-I | 89.16 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 89.02 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 87.67 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 87.43 | |
| PLN03153 | 537 | hypothetical protein; Provisional | 86.98 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 85.69 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 85.14 | |
| PLN03180 | 346 | reversibly glycosylated polypeptide; Provisional | 85.0 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 84.84 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 84.71 | |
| TIGR02665 | 186 | molyb_mobA molybdopterin-guanine dinucleotide bios | 84.7 | |
| KOG1476 | 330 | consensus Beta-1,3-glucuronyltransferase B3GAT1/SQ | 83.67 | |
| KOG3917 | 310 | consensus Beta-1,4-galactosyltransferase B4GALT7/S | 83.34 | |
| PRK02726 | 200 | molybdopterin-guanine dinucleotide biosynthesis pr | 82.69 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 82.43 | |
| cd04183 | 231 | GT2_BcE_like GT2_BcbE_like is likely involved in t | 81.8 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 81.66 | |
| cd02516 | 218 | CDP-ME_synthetase CDP-ME synthetase is involved in | 81.5 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 81.39 | |
| PF14097 | 180 | SpoVAE: Stage V sporulation protein AE1 | 81.33 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 81.3 | |
| cd04189 | 236 | G1P_TT_long G1P_TT_long represents the long form o | 80.79 | |
| cd06431 | 280 | GT8_LARGE_C LARGE catalytic domain has closest hom | 80.66 | |
| PLN02458 | 346 | transferase, transferring glycosyl groups | 80.34 |
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-48 Score=418.65 Aligned_cols=407 Identities=22% Similarity=0.352 Sum_probs=276.7
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhccchhhhhhhchhhhhhcCCCCcEEEE
Q 044519 19 GISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVIL--YVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQ 96 (534)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsVi 96 (534)
.++..+..+|....+|.-... ..+++++++++..|..+... ++...+...++. .+.+++ .+..|+|||+
T Consensus 195 ~~~~rY~~WR~~~tL~~~~~~---~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~---~~~~~~---~~~~P~VsVi 265 (852)
T PRK11498 195 TVSCRYIWWRYTSTLNWDDPV---SLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQP---VPLPKD---MSLWPTVDIF 265 (852)
T ss_pred HHHHHHHHHHHheeeCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC---CCCCcc---cCCCCcEEEE
Confidence 344555567777777754322 23333444444444443322 222221111111 122222 2568999999
Q ss_pred EeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 97 IPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 97 IP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
||+|||+ +.+++++.++++||||+++++|+|+|| |+|++.+ +++ + .+++|+++++++++|
T Consensus 266 IPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~---------la~----~-----~~v~yI~R~~n~~gK 327 (852)
T PRK11498 266 VPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ---------FAQ----E-----VGVKYIARPTHEHAK 327 (852)
T ss_pred EecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH---------HHH----H-----CCcEEEEeCCCCcch
Confidence 9999999 678999999999999998888888877 5554433 443 2 468899888888899
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc--hhhHhHhh--hcccchh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC--LMTRLQEM--SLDYHFS 250 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~--~~~~~~~~--~~~~~~~ 250 (534)
++|+|.|++++ +||||+++|||++++||+|++++..|.+||++++||+++.+.|++.- ...+.+.. +....+.
T Consensus 328 AGnLN~aL~~a---~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~ 404 (852)
T PRK11498 328 AGNINNALKYA---KGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYG 404 (852)
T ss_pred HHHHHHHHHhC---CCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHH
Confidence 99999999999 99999999999999999999999998899999999999888776421 01111111 1111222
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhh
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHR 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~R 330 (534)
..+... .......++|+++++||++++++|||++++++||.|++.|++++||++.|++++.+.++.|+|++++.+||.|
T Consensus 405 ~iq~g~-~~~~a~~~~Gs~aviRReaLeeVGGfd~~titED~dlslRL~~~Gyrv~yl~~~~a~glaPesl~~~~~QR~R 483 (852)
T PRK11498 405 LVQDGN-DMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIR 483 (852)
T ss_pred HHHhHH-HhhcccccccceeeeEHHHHHHhcCCCCCccCccHHHHHHHHHcCCEEEEEeccceeEECCCCHHHHHHHHHH
Confidence 223222 2222344689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhHHhhhhhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-----cchhHHHHHHHHH
Q 044519 331 WSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPE-----IQLTKPIAIYIPA 405 (534)
Q Consensus 331 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~-----~~~~~~~~~~l~~ 405 (534)
|++|.+|+++++. .+..++++..++++++...+. ++..+. -+.+ ++.|+.+++.. .....+..+++|.
T Consensus 484 WarG~lQi~r~~~--pl~~~gL~~~qRl~y~~~~l~---~l~g~~-~l~~-l~~Pl~~l~~gi~~i~a~~~~i~~y~lP~ 556 (852)
T PRK11498 484 WARGMVQIFRLDN--PLTGKGLKLAQRLCYANAMLH---FLSGIP-RLIF-LTAPLAFLLLHAYIIYAPALMIALFVLPH 556 (852)
T ss_pred HHHHHHHHHHHhC--hhccCCCCHHHHHHHHHHHHH---HHHHHH-HHHH-HHHHHHHHHhCChheeCChHHHHHHHHHH
Confidence 9999999998753 344678999999986654432 111211 1122 33355444321 1122233445555
Q ss_pred HHHHHHHhhccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCCCccc
Q 044519 406 TITLLNAVCTPRSFHLIVFW-ILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKK 464 (534)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~~~~~ 464 (534)
++.........+......+| .+++.+++...+.+++.++++ .++.+|+||||++..++
T Consensus 557 ~~~~~l~~~~~~g~~r~~~wseiye~v~a~~l~~~~~~~ll~-p~~~~F~VTpKg~~~~~ 615 (852)
T PRK11498 557 MIHASLTNSRIQGKYRHSFWSEIYETVLAWYIAPPTTVALFN-PHKGKFNVTAKGGLVEE 615 (852)
T ss_pred HHHHHHHHHHhcCcchHhHHHHHHHHHHHHHHHHHHHHHHcC-ccCCCcccCCCCccccc
Confidence 54432222111111122444 478888888888888888884 46789999999876554
|
|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-48 Score=421.52 Aligned_cols=418 Identities=25% Similarity=0.362 Sum_probs=278.2
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhccchhhhhhhchhhhhhcCCCCcEEE
Q 044519 18 SGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVIL--YVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLV 95 (534)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsV 95 (534)
..+...+..+|....+|.- ..+..+.+++++++..+..+... ++...++.+++. .+.+. .++..|+|||
T Consensus 65 ~~~~~~y~~wr~~~tl~~~---~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~---~~~~~---~~~~~P~VsV 135 (713)
T TIGR03030 65 VFISLRYLWWRLTETLPFD---NTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTP---VPLPL---DPEEWPTVDV 135 (713)
T ss_pred HHHHHHHHHhheeeecCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc---cCCCC---CcccCCeeEE
Confidence 4445556677777777742 22233444455555554443322 122222221111 11111 1256899999
Q ss_pred EEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchh-----hhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 96 QIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTD-----FFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 96 iIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~-----~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
+||+|||+ +.+++|++++++|+||+++++|+|+|| |+|+|.... +.+...+.+++.+++ .+++|++|+
T Consensus 136 iIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~-----~~v~yi~r~ 210 (713)
T TIGR03030 136 FIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRK-----LGVNYITRP 210 (713)
T ss_pred EEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHH-----cCcEEEECC
Confidence 99999999 566889999999999987777766655 788763210 000001233334433 578899888
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCC---chh--hHhHhh
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADE---CLM--TRLQEM 243 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~---~~~--~~~~~~ 243 (534)
++.++|++|+|.|++++ +|||++++|||++++||+|++++..|.+||++++||+++.+.|++. +.. .+...
T Consensus 211 ~n~~~KAgnLN~al~~a---~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~- 286 (713)
T TIGR03030 211 RNVHAKAGNINNALKHT---DGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNLGTFRRMPN- 286 (713)
T ss_pred CCCCCChHHHHHHHHhc---CCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhhHHHHHhhh-
Confidence 88889999999999999 9999999999999999999999999988999999999988777542 110 11110
Q ss_pred hcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHH
Q 044519 244 SLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKA 323 (534)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~ 323 (534)
+....+...+... .......++|+++++||++++++|||++++++||.+++.|++++||+++|+|++.++++.|+|+++
T Consensus 287 e~~~f~~~i~~g~-~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~~~~~g~~p~sl~~ 365 (713)
T TIGR03030 287 ENELFYGLIQDGN-DFWNAAFFCGSAAVLRREALDEIGGIAGETVTEDAETALKLHRRGWNSAYLDRPLIAGLAPETLSG 365 (713)
T ss_pred HHHHHHHHHHHHH-hhhCCeeecCceeEEEHHHHHHcCCCCCCCcCcHHHHHHHHHHcCCeEEEeccccccccCCCCHHH
Confidence 1111122222222 222233468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccchhhHHhhhhhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-----cchhHH
Q 044519 324 YRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPE-----IQLTKP 398 (534)
Q Consensus 324 ~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~-----~~~~~~ 398 (534)
+.+||.||++|.+|+++.. +.+..+++++.+|++++...+. ++.++ ..+.+ ++.|+.+++.. .+...+
T Consensus 366 ~~~Qr~RWa~G~~qi~~~~--~pl~~~gl~~~qrl~y~~~~~~---~~~~~-~~~~~-~~~P~~~l~~~~~~~~~~~~~~ 438 (713)
T TIGR03030 366 HIGQRIRWAQGMMQIFRLD--NPLLKRGLSFPQRLCYLNAMLF---WFFPL-PRVIF-LTAPLAYLFFGLNIFVASALEI 438 (713)
T ss_pred HHHHHHHHhcChHHHHhhh--CccccCCCCHHHHHHHHHHHHH---HHHHH-HHHHH-HHHHHHHHHhCCcceeCCHHHH
Confidence 9999999999999998753 3344578999999987654332 11121 11222 23355443322 112223
Q ss_pred HHHHHHHHHHHHHH--hhccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCCCccc
Q 044519 399 IAIYIPATITLLNA--VCTPRSFHLIVFW-ILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKK 464 (534)
Q Consensus 399 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~-~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~~~~~ 464 (534)
..+++|.++..... ....+ ...++| .+++.++++..+.+++.++++ .++.+|+||||++...+
T Consensus 439 ~~~~lp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~F~VT~Kg~~~~~ 504 (713)
T TIGR03030 439 LAYALPHMLHSLLTNSYLFGR--VRWPFWSEVYETVLAVYLLPPVLVTLLN-PKKPKFNVTPKGELLDE 504 (713)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--eecchHHHHHHHHHHHHHHHHHHHHHhC-cCCCCceecCCCccccc
Confidence 34455555433322 11111 112344 488888888888999999885 45678999999876543
|
Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. |
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=371.08 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=203.5
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
+..|.|||+||+|||++.+++|++|+++|+||+.+++ +|+|+|+|+|.+ .+++..++ ..++++++.
T Consensus 72 ~~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIi-vVdDgs~D~t~~---------~~~~~~~~----~~~v~vv~~ 137 (444)
T PRK14583 72 KGHPLVSILVPCFNEGLNARETIHAALAQTYTNIEVI-AINDGSSDDTAQ---------VLDALLAE----DPRLRVIHL 137 (444)
T ss_pred CCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEE-EEECCCCccHHH---------HHHHHHHh----CCCEEEEEe
Confidence 3579999999999999999999999999999975533 356668888776 66555443 356777755
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY 247 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~ 247 (534)
+ +++||++|+|.|++++ ++|+++++|||++++||+++++++.+.+||++++|++.....|. .++.++.|..++..
T Consensus 138 ~-~n~Gka~AlN~gl~~a---~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~-~~~~~~~~~~e~~~ 212 (444)
T PRK14583 138 A-HNQGKAIALRMGAAAA---RSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTR-STLIGRVQVGEFSS 212 (444)
T ss_pred C-CCCCHHHHHHHHHHhC---CCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCC-CcchhhHHHHHHHH
Confidence 4 4456999999999998 99999999999999999999999999889999999999887665 46777777555554
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.+...+......+.....+|+++++||++++++|||+++.++||.|++.|++++||++.|.|++.++++.|+|++++++|
T Consensus 213 ~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p~t~~~~~~Q 292 (444)
T PRK14583 213 IIGLIKRTQRVYGQVFTVSGVVAAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQ 292 (444)
T ss_pred HHHHHHHHHHHhCCceEecCceeEEEHHHHHHcCCCCCCcccccHHHHHHHHHcCCeEEEeeccEEeeeCCCCHHHHHHH
Confidence 44433333344555666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhhHHhhhhhhhhh
Q 044519 328 QHRWSCGPSNLFSKMTREIIL 348 (534)
Q Consensus 328 r~RW~~G~~~~~~~~~~~~~~ 348 (534)
|.||++|..|++.++.+..+.
T Consensus 293 r~RW~~G~~~~~~~~~~~~~~ 313 (444)
T PRK14583 293 RLRWAQGGAEVFLKNMFKLWR 313 (444)
T ss_pred HHHHhCcHHHHHHHHHHHHhC
Confidence 999999999999988776654
|
|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=368.88 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=203.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
++.|+|||+||+|||++.+++|++|+.+|+||+.+++| |+|+|+|+|.+ .+++..++ ..+++++++
T Consensus 51 ~~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiV-vdD~s~d~t~~---------~l~~~~~~----~~~v~~i~~ 116 (420)
T PRK11204 51 KEYPGVSILVPCYNEGENVEETISHLLALRYPNYEVIA-INDGSSDNTGE---------ILDRLAAQ----IPRLRVIHL 116 (420)
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCccHHH---------HHHHHHHh----CCcEEEEEc
Confidence 56799999999999999999999999999999755433 56668887776 66655443 456888854
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY 247 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~ 247 (534)
+ +++||++|+|.|++++ ++|+++++|||++++||+|+++++.+++||++++|+|.....|. .++.++.|..++..
T Consensus 117 ~-~n~Gka~aln~g~~~a---~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~-~~~~~~~~~~~~~~ 191 (420)
T PRK11204 117 A-ENQGKANALNTGAAAA---RSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNR-STLLGRIQVGEFSS 191 (420)
T ss_pred C-CCCCHHHHHHHHHHHc---CCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccc-hhHHHHHHHHHHHH
Confidence 4 4456999999999998 99999999999999999999999999889999999999887775 46667766555444
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.+.......+..+.....+|+++++||++++++|||+++..+||.|++.|++++||++.|.|++.++++.|+|++++.+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~t~~~~~~Q 271 (420)
T PRK11204 192 IIGLIKRAQRVYGRVFTVSGVITAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDIRYEPRALCWILMPETLKGLWKQ 271 (420)
T ss_pred hhhHHHHHHHHhCCceEecceeeeeeHHHHHHhCCCCCCcccchHHHHHHHHHcCCeEEeccccEEEeECcccHHHHHHH
Confidence 33333333344455566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhhHHhhhhhhhhhc
Q 044519 328 QHRWSCGPSNLFSKMTREIILC 349 (534)
Q Consensus 328 r~RW~~G~~~~~~~~~~~~~~~ 349 (534)
|+||++|.+|.++++.+..++.
T Consensus 272 r~RW~~G~~~~l~~~~~~~~~~ 293 (420)
T PRK11204 272 RLRWAQGGAEVLLKNFRRLWRW 293 (420)
T ss_pred HHHHhcCHHHHHHHHHHHhcCc
Confidence 9999999999999887666653
|
|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=344.90 Aligned_cols=241 Identities=15% Similarity=0.191 Sum_probs=188.3
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEc-CCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLD-DSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D-ds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|+|||+||+|||++.+.+||+|+.+|+||+++++|+|+| +|+|+|.+ ++++..++ ..++.+..
T Consensus 46 ~~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~---------il~~~~~~----~~~v~v~~ 112 (439)
T TIGR03111 46 GKLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQ---------VFCRAQNE----FPGLSLRY 112 (439)
T ss_pred CCCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHH---------HHHHHHHh----CCCeEEEE
Confidence 457999999999999999999999999999998876665555 58888876 66555443 34555543
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----Cc----hhh
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD----EC----LMT 238 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~----~~~ 238 (534)
. ++++||++|+|.|++.+ ++|||+++|+|++++||+++++++.|.+||++++++|........ .. +..
T Consensus 113 ~-~~~~Gka~AlN~gl~~s---~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~ 188 (439)
T TIGR03111 113 M-NSDQGKAKALNAAIYNS---IGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIR 188 (439)
T ss_pred e-CCCCCHHHHHHHHHHHc---cCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhH
Confidence 3 34567999999999998 999999999999999999999999997799999999886542110 01 111
Q ss_pred HhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHH-hCCCEEEEeccCcccccC
Q 044519 239 RLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS-LKGWKFVFVGDLGVKNEL 317 (534)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~-~~G~ki~~~~~~~~~~~~ 317 (534)
+.+..++...+.......+........+|+++++||++++++|||++++++||+|++.+++ ..|+++.++|++.++++.
T Consensus 189 ~~~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~ 268 (439)
T TIGR03111 189 RCEYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYNSETVGEDTDMTFQIRELLDGKVYLCENAIFYVDP 268 (439)
T ss_pred HhHHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCcCccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence 1111121111111112223334455678999999999999999999999999999999997 469999999999999999
Q ss_pred CcCHHHHHHHHhhhccchhhHHhhhhhh
Q 044519 318 PSTFKAYRYQQHRWSCGPSNLFSKMTRE 345 (534)
Q Consensus 318 p~t~~~~~~Qr~RW~~G~~~~~~~~~~~ 345 (534)
|+|++++++||.||.+|.+|+++.+.+.
T Consensus 269 p~t~~~~~~QR~RW~rG~~qv~~~~~~~ 296 (439)
T TIGR03111 269 IDGLNKLYTQRQRWQRGELEVSHMFFES 296 (439)
T ss_pred CcCHHHHHHHHHHHhccHHHHHHHHHhh
Confidence 9999999999999999999999776543
|
Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602). |
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=346.80 Aligned_cols=262 Identities=18% Similarity=0.198 Sum_probs=206.8
Q ss_pred CCCCcEEEEEeccCchH-----HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccE
Q 044519 88 KSYPMVLVQIPMYNEKE-----VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNV 162 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~-----~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v 162 (534)
+..|+|+|+||+|||+. .++.+++|+.+|+|++ +++|+|+||++|+..... .++..++.+++++ .+.++
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~----e~~~~~~L~~~~~-~~~~i 194 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA----EEAAWLELRAELG-GEGRI 194 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH----HHHHHHHHHHhcC-CCCcE
Confidence 56789999999999993 5888999999999974 567778888777766510 0123345556553 25689
Q ss_pred EEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 163 KYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 163 ~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
.|.+|.++.+.|+||+|.+++.. ..++||++++|||+++++|++.++++.|++||++|+||+++...|.+ ++++++|+
T Consensus 195 ~yr~R~~n~~~KaGNl~~~~~~~-~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~-slfaR~qq 272 (691)
T PRK05454 195 FYRRRRRNVGRKAGNIADFCRRW-GGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGAD-TLFARLQQ 272 (691)
T ss_pred EEEECCcCCCccHHHHHHHHHhc-CCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCC-CHHHHHHH
Confidence 99988888889999999999983 23789999999999999999999999998899999999999888875 89999886
Q ss_pred hhcccchhhhhhccc-ccCccccccCCcchhhHHHHHHhC---------CCCCCCccchHHHHHHHHhCCCEEEEecc-C
Q 044519 243 MSLDYHFSVEQEVGS-STCQFFGFNGTAGVWRIQAIEDAG---------GWKDRTTVEDMDLAVRASLKGWKFVFVGD-L 311 (534)
Q Consensus 243 ~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~Rr~~l~~~G---------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~-~ 311 (534)
...+........... ..++...+.|+++++|++++.+++ +|+++.++||.+++.+++++||+++|+|+ .
T Consensus 273 f~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~~ 352 (691)
T PRK05454 273 FATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDLP 352 (691)
T ss_pred HHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCccc
Confidence 432221111111111 112334468999999999999865 56677899999999999999999999999 5
Q ss_pred cccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhhcCCCChhHHHHHHH
Q 044519 312 GVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIY 362 (534)
Q Consensus 312 ~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (534)
.++++.|+|++++.+||+||++|++|+++.. ..+++++.+|.+++.
T Consensus 353 ~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~l-----~~~gl~~~~R~~~l~ 398 (691)
T PRK05454 353 GSYEELPPNLLDELKRDRRWCQGNLQHLRLL-----LAKGLHPVSRLHFLT 398 (691)
T ss_pred cccccCCCCHHHHHHHHHHHHhchHHHHHHH-----HhcCCCHHHHHHHHH
Confidence 7899999999999999999999999987653 346788888887553
|
|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=324.61 Aligned_cols=232 Identities=56% Similarity=0.954 Sum_probs=201.6
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|.|||+||+|||++.|.++|+|+++|+||.++++|+|+|||+|+|.+ ++++..+++...+.+++++.+.++
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s~D~t~~---------~~~~~~~~~~~~~~~i~~~~~~~~ 71 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDETVR---------LAREIVEEYAAQGVNIKHVRRADR 71 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECCCCcHHH---------HHHHHHHHHhhcCCceEEEECCCC
Confidence 67999999999999999999999999999887788788899999988 676666666556678888877777
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
+|+|++|+|.|++++ ++|||+++|+|++++|++|+++...+ ++|++++|+++....+.+.++..+.+.....+++.
T Consensus 72 ~G~k~~a~n~g~~~a---~~~~i~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T cd06437 72 TGYKAGALAEGMKVA---KGEYVAIFDADFVPPPDFLQKTPPYF-ADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFT 147 (232)
T ss_pred CCCchHHHHHHHHhC---CCCEEEEEcCCCCCChHHHHHhhhhh-cCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhh
Confidence 788999999999998 99999999999999999999977776 78999999999888887778888777665555554
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhh
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHR 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~R 330 (534)
..+......+....++|+++++||++++++|||++....||++++.|+..+||++.|+|++.++++.|.|++++++||.|
T Consensus 148 ~~~~~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~r 227 (232)
T cd06437 148 IEQVARSSTGLFFNFNGTAGVWRKECIEDAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHR 227 (232)
T ss_pred HhHhhHhhcCCeEEeccchhhhhHHHHHHhCCCCCCcchhhHHHHHHHHHCCCeEEEeccceeeeeCCcCHHHHHHHHHH
Confidence 44433333344445689999999999999999999888999999999999999999999999999999999999999999
Q ss_pred hccch
Q 044519 331 WSCGP 335 (534)
Q Consensus 331 W~~G~ 335 (534)
|++|.
T Consensus 228 W~~g~ 232 (232)
T cd06437 228 WSKGP 232 (232)
T ss_pred hccCC
Confidence 99984
|
Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we |
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=321.77 Aligned_cols=241 Identities=17% Similarity=0.166 Sum_probs=177.7
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHH-HcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAA-CGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl-~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
++.|+++|+||+|||+++|.++|+|+ .+++||+.++.| ++|+|+|+|.+ .+++.++++ ++++.+.
T Consensus 63 ~~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiV-v~d~ndd~T~~---------~v~~l~~~~----p~v~~vv 128 (504)
T PRK14716 63 VPEKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFV-GTYPNDPATLR---------EVDRLAARY----PRVHLVI 128 (504)
T ss_pred CCCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEE-EECCCChhHHH---------HHHHHHHHC----CCeEEEE
Confidence 56899999999999999999999996 568998654333 44678888777 666666554 4454332
Q ss_pred -ecCCCCCChhHHHHHHHhhh------ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhh
Q 044519 167 -RKNRNGYKAGALKEGLEKQY------VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMT 238 (534)
Q Consensus 167 -r~~~~g~Ka~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~ 238 (534)
..+.+.+|++|+|.|++++. ..++|+++++|||++++||+|+.+...+ ++.++||.+....+.+.+ +.+
T Consensus 129 ~~~~gp~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~---~~~~~VQ~pv~~~~~~~~~~~a 205 (504)
T PRK14716 129 VPHDGPTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL---PRHDFVQLPVFSLPRDWGEWVA 205 (504)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc---CCCCEEecceeccCCchhHHHH
Confidence 22223469999999997641 1234999999999999999999876655 455678877665544333 323
Q ss_pred HhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh-----CC-CCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 239 RLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA-----GG-WKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~-----Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
.....++...+......+...+...+.+|+++++||++++++ |+ |++++++||.|++.|+.++|+|++|+|++.
T Consensus 206 g~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai 285 (504)
T PRK14716 206 GTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRA 285 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEecccc
Confidence 222222222222222334556666667899999999999998 33 999999999999999999999999999985
Q ss_pred c---------------cccCCcCHHHHHHHHhhhccch-hhHHhhhhhh
Q 044519 313 V---------------KNELPSTFKAYRYQQHRWSCGP-SNLFSKMTRE 345 (534)
Q Consensus 313 ~---------------~~~~p~t~~~~~~Qr~RW~~G~-~~~~~~~~~~ 345 (534)
+ +++.|+|++++++||.||..|. +|.+++..++
T Consensus 286 ~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~ 334 (504)
T PRK14716 286 DDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWK 334 (504)
T ss_pred cccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCC
Confidence 4 3678999999999999999996 6887765443
|
|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=320.16 Aligned_cols=236 Identities=31% Similarity=0.451 Sum_probs=201.2
Q ss_pred CCcEEEEEeccCchH-HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 90 YPMVLVQIPMYNEKE-VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 90 ~P~VsViIP~yne~~-~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
.|+|+|+||+|||++ ++++|++|+++||||+.++.+ |+||++|++.+ ++++..+++. .+++....+
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~eviv-v~d~~~d~~~~---------~~~~~~~~~~---~~~~~~~~~ 119 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIV-VDDGSTDETYE---------ILEELGAEYG---PNFRVIYPE 119 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEE-ECCCCChhHHH---------HHHHHHhhcC---cceEEEecc
Confidence 599999999999996 999999999999999855433 56668888887 7777666542 344444223
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC--CchhhHhHhhhcc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD--ECLMTRLQEMSLD 246 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~--~~~~~~~~~~~~~ 246 (534)
++++||++|+|.|++.+ ++|+|+++|||++++||+|.++++.| .+++++++++.....+.. .+++++.+..++.
T Consensus 120 ~~~~gK~~al~~~l~~~---~~d~V~~~DaD~~~~~d~l~~~~~~f-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~ 195 (439)
T COG1215 120 KKNGGKAGALNNGLKRA---KGDVVVILDADTVPEPDALRELVSPF-EDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYL 195 (439)
T ss_pred ccCccchHHHHHHHhhc---CCCEEEEEcCCCCCChhHHHHHHhhh-cCCCeeEEeCCceeeecCChhhhcchhcchhhh
Confidence 56778999999999999 89999999999999999999999999 566666666666666654 6788888888877
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHH
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~ 326 (534)
..+.......+..+....++|++.++||++++++|||++++++||.+++.+++.+|||+.|+|++.++++.|+|++++++
T Consensus 196 ~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~ 275 (439)
T COG1215 196 SAFYFRLRAASKGGLISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWR 275 (439)
T ss_pred hhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEeecceEeeeCcccHHHHHH
Confidence 77766666566666677789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccchhhHHhhh
Q 044519 327 QQHRWSCGPSNLFSKM 342 (534)
Q Consensus 327 Qr~RW~~G~~~~~~~~ 342 (534)
||.||++|.+|.+..+
T Consensus 276 Qr~RW~~g~~~~~~~~ 291 (439)
T COG1215 276 QRLRWARGGLQVLLLH 291 (439)
T ss_pred HHHHHHcccceeeehh
Confidence 9999999999988754
|
|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=295.99 Aligned_cols=236 Identities=19% Similarity=0.241 Sum_probs=189.3
Q ss_pred EEEEEeccCch-HHHHHHHHHHHc----CCC-CCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 93 VLVQIPMYNEK-EVYKLSIGAACG----LSW-PSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 93 VsViIP~yne~-~~l~~~L~sl~~----q~y-p~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
|||+||+|||+ +.+.++|++.++ |+| |+ ++|+|+||++|++... ..++.+++.+++++. +.+++|++
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~----~~~~~~~~l~~~~~~-~~~v~~~~ 73 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWL----AEEAAWLDLCEELGA-QGRIYYRR 73 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHH----HHHHHHHHHHHHhCC-CCcEEEEE
Confidence 69999999999 559999999875 777 54 5677899988886651 001234446667644 78999999
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
|.++.|.|++++|.++... ..++|||+++|||+.++||+|.+++++|.+||++++||+++...|.+ +++++++..+..
T Consensus 74 r~~~~g~Kag~l~~~~~~~-~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~-~~~~~~~~~~~~ 151 (254)
T cd04191 74 RRENTGRKAGNIADFCRRW-GSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAE-TLFARLQQFANR 151 (254)
T ss_pred cCCCCCccHHHHHHHHHHh-CCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCC-CHHHHHHHHHHH
Confidence 9999999999999999861 12899999999999999999999999997799999999999998875 788998876533
Q ss_pred cchhhhhhcccc-cCccccccCCcchhhHHHHHHh---------CCCCCCCccchHHHHHHHHhCCCEEEEeccCc-ccc
Q 044519 247 YHFSVEQEVGSS-TCQFFGFNGTAGVWRIQAIEDA---------GGWKDRTTVEDMDLAVRASLKGWKFVFVGDLG-VKN 315 (534)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~~G~~~~~Rr~~l~~~---------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~ 315 (534)
......+..... .+....+.|+++++||++++++ |+|++++++||++++.+++++||+++|.|++. +++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~~~~~ 231 (254)
T cd04191 152 LYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLEGSYE 231 (254)
T ss_pred HHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCcceEe
Confidence 222222221111 1233456799999999999884 34666789999999999999999999999987 588
Q ss_pred cCCcCHHHHHHHHhhhccchhh
Q 044519 316 ELPSTFKAYRYQQHRWSCGPSN 337 (534)
Q Consensus 316 ~~p~t~~~~~~Qr~RW~~G~~~ 337 (534)
+.|++++++++||.||++|.+|
T Consensus 232 ~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 232 ECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred ECCCCHHHHHHHHHHHHhhcCc
Confidence 8999999999999999999986
|
Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane. |
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=296.14 Aligned_cols=236 Identities=23% Similarity=0.335 Sum_probs=186.5
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEE-EcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQV-LDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V-~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|.|||+||+|||++.+.++|+|+++|+||++.++|+| +|+|+|+|.+ ++++.... ...++.+.. ..
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~---------i~~~~~~~---~~~~i~~~~-~~ 67 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIA---------AARALRLP---SIFRVVVVP-PS 67 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHH---------HHHHhccC---CCeeEEEec-CC
Confidence 6899999999999999999999999999976666655 4668888777 66544221 123444442 23
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcC-CcEEEEeeeeEeecCCCchhhHhHhhhcccc
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLEN-KELGLVQARWKFVNADECLMTRLQEMSLDYH 248 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~-~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 248 (534)
.+.||+.|+|.|++++ +||||+++|+|++++|+++.++++.+.++ +++++++++....+...++..+....++...
T Consensus 68 ~~~G~~~a~n~g~~~a---~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (241)
T cd06427 68 QPRTKPKACNYALAFA---RGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAW 144 (241)
T ss_pred CCCchHHHHHHHHHhc---CCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHH
Confidence 4457999999999998 99999999999999999999999999654 8999999988777765566655543333222
Q ss_pred hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHH
Q 044519 249 FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQ 328 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr 328 (534)
+..........+....++|+++++||++++++|||++....||.|++.|+.++|+++.++|.. ++++.|+|++++.+||
T Consensus 145 ~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~~-~~~~~~~~~~~~~~q~ 223 (241)
T cd06427 145 FDYLLPGLARLGLPIPLGGTSNHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYRTGVLNST-TLEEANNALGNWIRQR 223 (241)
T ss_pred HHHHHHHHHhcCCeeecCCchHHhhHHHHHHcCCCCcccchhhHHHHHHHHHCCceEEEeccc-ccccCcHhHHHHHHHH
Confidence 222112122233334467999999999999999999888899999999999999999999885 4789999999999999
Q ss_pred hhhccchhhHHhhhh
Q 044519 329 HRWSCGPSNLFSKMT 343 (534)
Q Consensus 329 ~RW~~G~~~~~~~~~ 343 (534)
.||.+|.+|++..+.
T Consensus 224 ~Rw~~g~~~~~~~~~ 238 (241)
T cd06427 224 SRWIKGYMQTWLVHM 238 (241)
T ss_pred HHHhccHHHHHHHHh
Confidence 999999999987754
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot |
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=315.27 Aligned_cols=238 Identities=19% Similarity=0.191 Sum_probs=180.3
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHH-cCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAAC-GLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~-~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
++.|+|||+||+|||+.++.+++++++ +|+||+. +|+++++ ++|.|.+ .+++.++++ ++++.+
T Consensus 60 ~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~--eI~vi~~~nD~~T~~---------~~~~l~~~~----p~~~~v 124 (727)
T PRK11234 60 PDEKPLAIMVPAWNETGVIGNMAELAATTLDYENY--HIFVGTYPNDPATQA---------DVDAVCARF----PNVHKV 124 (727)
T ss_pred CCCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCe--EEEEEecCCChhHHH---------HHHHHHHHC----CCcEEE
Confidence 567999999999999999999999987 7999984 4555544 4444455 777777765 333332
Q ss_pred E-ecCCCCCChhHHHHHHHhhh------ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC-Cchh
Q 044519 166 T-RKNRNGYKAGALKEGLEKQY------VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD-ECLM 237 (534)
Q Consensus 166 ~-r~~~~g~Ka~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~~~~ 237 (534)
. ....++||++|+|.+++++. ..++|.++++|||++++||+|+ .++++ .++. ++||++....+.+ .++.
T Consensus 125 ~~~~~g~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l-~~~~-~~VQ~p~~p~~~~~~~~~ 201 (727)
T PRK11234 125 VCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYL-VERK-DLIQIPVYPFEREWTHFT 201 (727)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhh-cCCC-CeEeecccCCCccHHHHH
Confidence 2 22234579999999999762 1245778999999999999998 66777 4555 8999986644432 2345
Q ss_pred hHhHhhhcccchhhhhhcccccCccccccCCcchh-hH--HHHHHhC---CCCCCCccchHHHHHHHHhCCCEEEEecc-
Q 044519 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVW-RI--QAIEDAG---GWKDRTTVEDMDLAVRASLKGWKFVFVGD- 310 (534)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-Rr--~~l~~~G---g~~~~~~~ED~~l~~rl~~~G~ki~~~~~- 310 (534)
++.+..++...+..........++..+..|+++++ || +++.++| +|+.++++||+|++.+++.+||++.|+|.
T Consensus 202 ~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~ 281 (727)
T PRK11234 202 SGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFP 281 (727)
T ss_pred HHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccc
Confidence 55555555544444444555565566788999999 77 5788888 69999999999999999999999999991
Q ss_pred ----------------------CcccccCCcCHHHHHHHHhhhccc-hhhHHhhhh
Q 044519 311 ----------------------LGVKNELPSTFKAYRYQQHRWSCG-PSNLFSKMT 343 (534)
Q Consensus 311 ----------------------~~~~~~~p~t~~~~~~Qr~RW~~G-~~~~~~~~~ 343 (534)
..++++.|.|+++.++||.||..| .+|.++...
T Consensus 282 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~~~~ 337 (727)
T PRK11234 282 VVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFKTLG 337 (727)
T ss_pred cccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHHHhC
Confidence 347788999999999999999999 578877655
|
|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=296.48 Aligned_cols=231 Identities=18% Similarity=0.255 Sum_probs=178.1
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
+..|+|||+||+|||++.+++||+|+++|+||+.|++| ++|+|+|+|.+ ++++..++++ +.+++++..
T Consensus 38 ~~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIiv-vdd~s~D~t~~---------iv~~~~~~~p--~~~i~~v~~ 105 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLF-GVQDPDDPALA---------VVRRLRADFP--DADIDLVID 105 (373)
T ss_pred CCCCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEE-EeCCCCCcHHH---------HHHHHHHhCC--CCceEEEEC
Confidence 34789999999999999999999999999999855433 55557776666 7777666543 345666644
Q ss_pred cCCCC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc
Q 044519 168 KNRNG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245 (534)
Q Consensus 168 ~~~~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~ 245 (534)
+++.| +|.+|++.+++++ ++|+++++|||++++||+|++++..+ ++|++++|++.....+ ..++.++......
T Consensus 106 ~~~~G~~~K~~~l~~~~~~a---~ge~i~~~DaD~~~~p~~L~~lv~~~-~~~~v~~V~~~~~~~~-~~~~~~~l~~~~~ 180 (373)
T TIGR03472 106 ARRHGPNRKVSNLINMLPHA---RHDILVIADSDISVGPDYLRQVVAPL-ADPDVGLVTCLYRGRP-VPGFWSRLGAMGI 180 (373)
T ss_pred CCCCCCChHHHHHHHHHHhc---cCCEEEEECCCCCcChhHHHHHHHHh-cCCCcceEeccccCCC-CCCHHHHHHHHHh
Confidence 44433 5889999999998 99999999999999999999999999 7899999999754333 3456665543322
Q ss_pred ccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHH
Q 044519 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKA 323 (534)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~ 323 (534)
+..+..........+......|+++++||++++++|||++ +.++||.+++.++.++|+++.+.|++..++..|+|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~v~~~~~~~s~~~ 260 (373)
T TIGR03472 181 NHNFLPSVMVARALGRARFCFGATMALRRATLEAIGGLAALAHHLADDYWLGELVRALGLRVVLAPVVVDTDVHETSFAT 260 (373)
T ss_pred hhhhhHHHHHHHhccCCccccChhhheeHHHHHHcCChHHhcccchHHHHHHHHHHHcCCeEEecchhhhcCCCccCHHH
Confidence 2222111111111122233579999999999999999986 56789999999999999999999999888888899999
Q ss_pred HHHHHhhhccch
Q 044519 324 YRYQQHRWSCGP 335 (534)
Q Consensus 324 ~~~Qr~RW~~G~ 335 (534)
+++||.||.++.
T Consensus 261 ~~~q~~RW~r~~ 272 (373)
T TIGR03472 261 LLAHELRWSRTI 272 (373)
T ss_pred HHHHHHHHHhhh
Confidence 999999998665
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano |
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=285.82 Aligned_cols=234 Identities=28% Similarity=0.505 Sum_probs=183.7
Q ss_pred EEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 94 LVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 94 sViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
||+||+|||+ +.++++|+|+.+|+||+.+++| |+|+|+|++.. +.+++.+++. +.+++++...++.|
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiV-vdd~s~D~t~~--------~~i~~~~~~~---~~~i~~i~~~~~~G 68 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIV-IDNNTKDEALW--------KPVEAHCAQL---GERFRFFHVEPLPG 68 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEE-EeCCCCchhHH--------HHHHHHHHHh---CCcEEEEEcCCCCC
Confidence 6999999998 7999999999999999866433 66679998874 3666655543 34677776665667
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
+|++|+|.|++++ ..++||++++|+|++++|++|.+++..+ +++++++|+++....+...+++.+.....+...+...
T Consensus 69 ~~~~a~n~g~~~a-~~~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
T cd06435 69 AKAGALNYALERT-APDAEIIAVIDADYQVEPDWLKRLVPIF-DDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIG 146 (236)
T ss_pred CchHHHHHHHHhc-CCCCCEEEEEcCCCCcCHHHHHHHHHHh-cCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHH
Confidence 7999999999987 1237999999999999999999999998 6899999998765545444444433222211112211
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhhhc
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWS 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~ 332 (534)
...... ......+|+++++||++++++|||++....||.+++.|+.++||++.++|++.++++.|.++.++.+||.||.
T Consensus 147 ~~~~~~-~~~~~~~g~~~~~rr~~~~~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~~~~~~~~~~~~~~~~~q~~rw~ 225 (236)
T cd06435 147 MVSRNE-RNAIIQHGTMCLIRRSALDDVGGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWA 225 (236)
T ss_pred hccccc-cCceEEecceEEEEHHHHHHhCCCCCccccchHHHHHHHHHCCcEEEEcchhhccCcCcccHHHHHHHHHHHh
Confidence 111111 1122357999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred cchhhHHhhh
Q 044519 333 CGPSNLFSKM 342 (534)
Q Consensus 333 ~G~~~~~~~~ 342 (534)
.|.+|.+++|
T Consensus 226 ~g~~~~~~~~ 235 (236)
T cd06435 226 YGAVQILKKH 235 (236)
T ss_pred cchhhhhhcc
Confidence 9999998876
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. |
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=298.12 Aligned_cols=292 Identities=17% Similarity=0.167 Sum_probs=204.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhhhhhchhhhhhcCCCCcEEEEEeccCchHHHHHHHHHHH
Q 044519 35 LLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAAC 114 (534)
Q Consensus 35 ~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~~~l~~~L~sl~ 114 (534)
.+..+.....++.++..++.+++-.. .|.+..+|+...+.+..+..++....++.|++||+||+|||++++.+++++++
T Consensus 16 ~~~~~~~~~~~~~~i~~~ddl~~d~~-yw~r~~~r~~~~~~~~~~~~~~~l~~~~~~~vsIlVPa~nE~~VI~~~v~~ll 94 (703)
T PRK15489 16 VLETAAVATALVILISSLDDLFIDAW-YWVRELYRWLTRERRYRPLTAEQLRERDEQPLAIMVPAWKEYDVIAKMIENML 94 (703)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHH-HHHHHHHHhhhccccCCCCChHHhcccCCCceEEEEeCCCcHHHHHHHHHHHH
Confidence 34444444444445555666666643 33333333322222222333332233678999999999999999999999985
Q ss_pred -cCCCCCCceEEEE-EcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-CCCCChhHHHHHHHhhhc----
Q 044519 115 -GLSWPSDRLIVQV-LDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN-RNGYKAGALKEGLEKQYV---- 187 (534)
Q Consensus 115 -~q~yp~~~~~I~V-~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~-~~g~Ka~aln~gl~~a~~---- 187 (534)
+++||+.+ |+| ++.++++|.+ .+++...++ ++++.++.++ .+.||+.|+|.|++.+..
T Consensus 95 ~~ldYp~~~--I~v~~~~nD~~T~~---------~~~~~~~~~----p~~~~v~~~~~gp~gKa~ALN~~l~~~~~~e~~ 159 (703)
T PRK15489 95 ATLDYRRYV--IFVGTYPNDAETIT---------EVERMRRRY----KRLVRVEVPHDGPTCKADCLNWIIQAIFRYEAG 159 (703)
T ss_pred hcCCCCCeE--EEEEecCCCccHHH---------HHHHHhccC----CcEEEEEcCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 88999754 444 3222234544 555554433 4555554433 335699999999987511
Q ss_pred cC--CcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeE-eecCCCchhhHhHhhhcccchhhhhhcccccCcccc
Q 044519 188 KD--CQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWK-FVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFG 264 (534)
Q Consensus 188 ~~--~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (534)
.+ .+.+++.|||++++|+.|+.+ +++..++ +++|++.. ..|...+|+++.+..++...+......+...++..+
T Consensus 160 ~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ip 236 (703)
T PRK15489 160 HGIEFAGVILHDSEDVLHPLELKYF-NYLLPRK--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVP 236 (703)
T ss_pred ccCccceEEEEcCCCCCChhHHHHH-HhhcCCc--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCcee
Confidence 12 344999999999999999877 5553444 57888644 445667899999988888877766666666666677
Q ss_pred ccCCcchhhHHHHHHh---CC---CCCCCccchHHHHHHHHhCCCEEEEec-----------------------cCcccc
Q 044519 265 FNGTAGVWRIQAIEDA---GG---WKDRTTVEDMDLAVRASLKGWKFVFVG-----------------------DLGVKN 315 (534)
Q Consensus 265 ~~G~~~~~Rr~~l~~~---Gg---~~~~~~~ED~~l~~rl~~~G~ki~~~~-----------------------~~~~~~ 315 (534)
.+|++++|||++++++ || |+.++++||.|++.|++++|++..|+- ...+++
T Consensus 237 l~Gv~~~frr~aL~~l~~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre 316 (703)
T PRK15489 237 SAGVGTCFSRRALLALMKERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVRE 316 (703)
T ss_pred ccCcceeeeHHHHHHHHHhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehh
Confidence 8999999999999877 54 666788999999999999999999921 244678
Q ss_pred cCCcCHHHHHHHHhhhccchh-hHHhhhhhh
Q 044519 316 ELPSTFKAYRYQQHRWSCGPS-NLFSKMTRE 345 (534)
Q Consensus 316 ~~p~t~~~~~~Qr~RW~~G~~-~~~~~~~~~ 345 (534)
+.|.|+++.++||.||..|.. |.+++..|.
T Consensus 317 ~fP~~~~a~~rQk~RW~~Gi~~q~~~~~gw~ 347 (703)
T PRK15489 317 YFPDTFRTAYRQKARWVLGIAFQGWEQMGWR 347 (703)
T ss_pred hCcHHHHHHHHHHHHHHhHHHHhhHHHhCCC
Confidence 889999999999999999999 887776554
|
|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=274.07 Aligned_cols=230 Identities=32% Similarity=0.478 Sum_probs=180.1
Q ss_pred CcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 91 PMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 91 P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
|+|||+||+|||+ +.+++||+|+++|+||+++++|+|+|| |+|++.+ ++++...+ .+++++.++
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~---------~~~~~~~~-----~~~~~~~~~ 66 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRA---------LAAELGVE-----YGYRYLTRP 66 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHH---------HHHHhhcc-----cCceEEEeC
Confidence 6899999999987 789999999999999985445555555 6666655 66655332 255666677
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhhHhHhhhccc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMTRLQEMSLDY 247 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~ 247 (534)
.+.|+|++++|.|++++ ++||++++|+|+.++|++|++++..+.++++++++++.....+.+.. +..+........
T Consensus 67 ~~~~~~~~~~n~~~~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (234)
T cd06421 67 DNRHAKAGNLNNALAHT---TGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQEL 143 (234)
T ss_pred CCCCCcHHHHHHHHHhC---CCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHH
Confidence 77788999999999998 99999999999999999999999999666999999998776655432 112111111011
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
......... .......++|+++++||++++++|||++....||.+++.|+.++|+++.+.|++.++++.|.+++++.+|
T Consensus 144 ~~~~~~~~~-~~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~~~~~~~~~~q 222 (234)
T cd06421 144 FYGVIQPGR-DRWGAAFCCGSGAVVRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAYIKQ 222 (234)
T ss_pred HHHHHHHHH-hhcCCceecCceeeEeHHHHHHhCCCCccceeccHHHHHHHHHcCceEEEecCccccccCCccHHHHHHH
Confidence 111111111 1122334579999999999999999998889999999999999999999999999999999999999999
Q ss_pred HhhhccchhhH
Q 044519 328 QHRWSCGPSNL 338 (534)
Q Consensus 328 r~RW~~G~~~~ 338 (534)
+.||.+|.++.
T Consensus 223 ~~rw~~~~~~~ 233 (234)
T cd06421 223 RLRWARGMLQI 233 (234)
T ss_pred HHHHhcCCeee
Confidence 99999998764
|
Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. |
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=282.85 Aligned_cols=225 Identities=30% Similarity=0.431 Sum_probs=154.1
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|+|+|+||+|||++.+.++|+|+++|+||+ ++|+|+|| ++|++.+ .+++.+++++ +.+++++.+++
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~---------~~~~~~~~~~--~~~v~vi~~~~ 67 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAE---------ILRALAARYP--RVRVRVIRRPR 67 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCT---------THHHHHHTTG--G-GEEEEE---
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHH---------HHHHHHHHcC--CCceEEeecCC
Confidence 789999999999999999999999999976 44555554 6666555 6666666654 33567776554
Q ss_pred CCC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc
Q 044519 170 RNG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY 247 (534)
Q Consensus 170 ~~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~ 247 (534)
+.| +|++|+|.|++++ ++|+++++|+|++++|++|.++++.+ ++|++++|++.....+ +.++.+..+......
T Consensus 68 ~~g~~~k~~a~n~~~~~~---~~d~i~~lD~D~~~~p~~l~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~ 142 (228)
T PF13641_consen 68 NPGPGGKARALNEALAAA---RGDYILFLDDDTVLDPDWLERLLAAF-ADPGVGAVGGPVFPDN-DRNWLTRLQDLFFAR 142 (228)
T ss_dssp -HHHHHHHHHHHHHHHH------SEEEEE-SSEEE-CHHHHHHHHHH-HBSS--EEEEEEEETT-CCCEEEE-TT--S-E
T ss_pred CCCcchHHHHHHHHHHhc---CCCEEEEECCCcEECHHHHHHHHHHH-HhCCCCeEeeeEeecC-CCCHHHHHHHHHHhh
Confidence 443 6999999999998 89999999999999999999999999 8999999999986655 556666655433322
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.+.......... ...+++|+++++||++++++|||++...+||.+++.|+.++||++.++|++.++++.|.|++++.+|
T Consensus 143 ~~~~~~~~~~~~-~~~~~~G~~~~~rr~~~~~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~~~~~~~~~q 221 (228)
T PF13641_consen 143 WHLRFRSGRRAL-GVAFLSGSGMLFRRSALEEVGGFDPFILGEDFDLCLRLRAAGWRIVYAPDALVYHEEPSSLKAFFKQ 221 (228)
T ss_dssp ETTTS-TT-B-----S-B--TEEEEEHHHHHHH-S--SSSSSHHHHHHHHHHHTT--EEEEEEEEEEE--SSSTHHHHHH
T ss_pred hhhhhhhhhccc-ceeeccCcEEEEEHHHHHHhCCCCCCCcccHHHHHHHHHHCCCcEEEECCcEEEEeCCCCHHHHHHH
Confidence 222222222222 3455689999999999999999999778999999999999999999999999999999999999999
Q ss_pred Hhhhccc
Q 044519 328 QHRWSCG 334 (534)
Q Consensus 328 r~RW~~G 334 (534)
|.||.+|
T Consensus 222 ~~RW~~g 228 (228)
T PF13641_consen 222 RFRWSRG 228 (228)
T ss_dssp HHHHH--
T ss_pred HhccCcC
Confidence 9999987
|
|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=277.97 Aligned_cols=312 Identities=21% Similarity=0.268 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhhhh-hhchhhhhhcCCCCcEEEEEec---cCch-HHHHHHHHHHHcCCCCC
Q 044519 46 MSLMLFIERVYMAIVILYVKVLRKKRYTEYKL-EEMKEDLELNKSYPMVLVQIPM---YNEK-EVYKLSIGAACGLSWPS 120 (534)
Q Consensus 46 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~VsViIP~---yne~-~~l~~~L~sl~~q~yp~ 120 (534)
.+++.+++.+...+..+.-...+..|-++... +.+. .....+++|.|+|.|++ ++|+ -....|+-|+++.|||.
T Consensus 56 ~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~~~~~L~-~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~ 134 (734)
T PLN02893 56 ITLLLLLADIVLAFMWATTQAFRMCPVHRRVFIEHLE-HYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPT 134 (734)
T ss_pred HHHHHHHHHHHHHHHHHHccCccccccccccCHHHHh-hhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCc
Confidence 35566666666665544444444444333211 1111 11112579999999999 7887 57789999999999999
Q ss_pred CceEEEEEcCC-Chhhh---------------------------------------c-----hhhhhhhHHHHHHHH---
Q 044519 121 DRLIVQVLDDS-TNEVL---------------------------------------R-----TDFFQYTQKLVELEC--- 152 (534)
Q Consensus 121 ~~~~I~V~Dds-~D~t~---------------------------------------~-----~~~~~~~~~~v~~~~--- 152 (534)
+++-++|.||+ +.-|. + ..+||.....++...
T Consensus 135 ~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~ 214 (734)
T PLN02893 135 EKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERG 214 (734)
T ss_pred cceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999884 21111 0 023333333333221
Q ss_pred ---HHH-------------hh--------------------------cCccEEEEEecCCC----CCChhHHHHHHHhhh
Q 044519 153 ---LKW-------------IE--------------------------KGVNVKYETRKNRN----GYKAGALKEGLEKQY 186 (534)
Q Consensus 153 ---~~~-------------~~--------------------------~~~~v~~~~r~~~~----g~Ka~aln~gl~~a~ 186 (534)
+++ .. .-+++.|++|+++. +.||||+|.+++.+.
T Consensus 215 ~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~ 294 (734)
T PLN02893 215 KVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSA 294 (734)
T ss_pred cCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhc
Confidence 111 00 11456788888774 689999999999642
Q ss_pred c-cCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----cEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccC
Q 044519 187 V-KDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----ELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTC 260 (534)
Q Consensus 187 ~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (534)
. .++++|+.+|||+.+ +|+++++++.+| .|| +++.||.++.+.|-+.+-.-. -+....+...+. +.+..
T Consensus 295 ~~TngpfIl~lDcD~y~n~p~~l~~amcff-~Dp~~~~~vafVQfPQ~F~~i~~~D~y~---~~~~vff~~~~~-glDG~ 369 (734)
T PLN02893 295 TMTNAPIILTLDCDMYSNDPQTPLRALCYL-LDPSMDPKLGYVQFPQIFHGINKNDIYA---GELKRLFQINMI-GMDGL 369 (734)
T ss_pred ccCCCCEEEEecCCcCCCchhHHHHHHHHh-cCCCcCCceEEEeCcccccCCCcCCCCc---chhHHHHHHHhh-ccccc
Confidence 2 489999999999996 799999999999 565 799999999988765441100 111223444444 33334
Q ss_pred ccccccCCcchhhHHHHHH------------------------------------------------hCCCCCCCccchH
Q 044519 261 QFFGFNGTAGVWRIQAIED------------------------------------------------AGGWKDRTTVEDM 292 (534)
Q Consensus 261 ~~~~~~G~~~~~Rr~~l~~------------------------------------------------~Gg~~~~~~~ED~ 292 (534)
+...+.|+++++||+++.. .+||..++++||.
T Consensus 370 ~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~ 449 (734)
T PLN02893 370 AGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDY 449 (734)
T ss_pred CCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccceEeccccccH
Confidence 4456789999999999930 1367778899999
Q ss_pred HHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhh-hcCCCChhHHHHHHHH
Q 044519 293 DLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREII-LCERVSVWKRLYLIYA 363 (534)
Q Consensus 293 ~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 363 (534)
+++++++.+|||.+|++ .....+..|+|+.++..||.||++|.+|++......++ ..+++++.+++.++..
T Consensus 450 ~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~ 523 (734)
T PLN02893 450 YTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHY 523 (734)
T ss_pred HHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHH
Confidence 99999999999999985 34568999999999999999999999999765333443 3478999999987753
|
|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=265.48 Aligned_cols=191 Identities=19% Similarity=0.280 Sum_probs=163.4
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|.|||+||+|||++.+.++|+|+.+|+||+.+++| |+|+|+|+|.+ ++++..++++ ..+++++..+++
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiiv-Vdd~s~d~t~~---------~~~~~~~~~~--~~~~~~~~~~~~ 68 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYEILF-CVQDEDDPAIP---------VVRKLIAKYP--NVDARLLIGGEK 68 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCCeEEEE-EeCCCcchHHH---------HHHHHHHHCC--CCcEEEEecCCc
Confidence 67999999999999999999999999999855433 66778888877 7776665542 234555544434
Q ss_pred CC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccc
Q 044519 171 NG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYH 248 (534)
Q Consensus 171 ~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 248 (534)
.| +|++++|.|++.+ ++||++++|+|+.++|++|++++..+ .+|++++|++.
T Consensus 69 ~g~~~~~~~~n~g~~~a---~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~---------------------- 122 (196)
T cd02520 69 VGINPKVNNLIKGYEEA---RYDILVISDSDISVPPDYLRRMVAPL-MDPGVGLVTCL---------------------- 122 (196)
T ss_pred CCCCHhHHHHHHHHHhC---CCCEEEEECCCceEChhHHHHHHHHh-hCCCCCeEEee----------------------
Confidence 33 5788999999998 99999999999999999999999998 68899999876
Q ss_pred hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHH
Q 044519 249 FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~ 326 (534)
...|+++++||++++++|||+. ....||.+++.|+.++|+++.+.|++.++++.|.+++++++
T Consensus 123 ---------------~~~g~~~~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~~~~~~~~~~ 187 (196)
T cd02520 123 ---------------CAFGKSMALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLGSTSLASFWR 187 (196)
T ss_pred ---------------cccCceeeeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCCcccHHHHHH
Confidence 3468999999999999999986 24589999999999999999999999999999999999999
Q ss_pred HHhhhccc
Q 044519 327 QQHRWSCG 334 (534)
Q Consensus 327 Qr~RW~~G 334 (534)
||.||.+.
T Consensus 188 q~~rw~~~ 195 (196)
T cd02520 188 RQLRWSRT 195 (196)
T ss_pred HHHHHhcc
Confidence 99999875
|
UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. |
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=271.64 Aligned_cols=204 Identities=21% Similarity=0.237 Sum_probs=169.3
Q ss_pred EEEeccCch-HHHHHHHHHHHcCCCC--------CCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 95 VQIPMYNEK-EVYKLSIGAACGLSWP--------SDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 95 ViIP~yne~-~~l~~~L~sl~~q~yp--------~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
|+||+|||+ ++|+++|+|+++|+|| .++++|+|+ |+|+| .
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d---~--------------------------- 50 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK---K--------------------------- 50 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc---c---------------------------
Confidence 689999997 8999999999999999 666777664 55776 1
Q ss_pred EEecCCCCCChh-------HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchh
Q 044519 165 ETRKNRNGYKAG-------ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLM 237 (534)
Q Consensus 165 ~~r~~~~g~Ka~-------aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~ 237 (534)
+ .||.. ++|.++..+ ++|+++++|||++++||+|++++.+|.+||++++|+|.....|...+++
T Consensus 51 -----~-~gk~~~~~~~~~~~~~~~~~a---~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~ 121 (244)
T cd04190 51 -----N-RGKRDSQLWFFNYFCRVLFPD---DPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPL 121 (244)
T ss_pred -----c-CcchHHHHHHHHHHHHHhhcC---CCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhH
Confidence 0 11332 456777776 9999999999999999999999999977999999999998888777888
Q ss_pred hHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--------------------CCccchHHHHHH
Q 044519 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--------------------RTTVEDMDLAVR 297 (534)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--------------------~~~~ED~~l~~r 297 (534)
+..|..++...........+..+...+.+|+++++|++++++.|++.. ..++||.+++.+
T Consensus 122 ~~~q~~ey~~~~~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~ 201 (244)
T cd04190 122 VMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTL 201 (244)
T ss_pred HHhHheehhhhhhhcccHHHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHH
Confidence 888877655433333333455566677899999999999999976543 236899999999
Q ss_pred HHhCCCEEEE--eccCcccccCCcCHHHHHHHHhhhccchhh
Q 044519 298 ASLKGWKFVF--VGDLGVKNELPSTFKAYRYQQHRWSCGPSN 337 (534)
Q Consensus 298 l~~~G~ki~~--~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 337 (534)
+.++||++.+ .|++.++++.|+|++++++||.||.+|.+.
T Consensus 202 l~~~G~~~~~~~~~~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 202 LLKAGPKRKYLYVPGAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred HhccCCccEEEEecccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 9999999999 999999999999999999999999999863
|
Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified. |
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=254.39 Aligned_cols=222 Identities=19% Similarity=0.202 Sum_probs=172.6
Q ss_pred cEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 92 MVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 92 ~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
.|||+||+|||+ +.+.+||+|+.+|+ | .++ |+|+|+|+|++.+ .+++. .+...+.++ . .+
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~-~-~ei-ivvdd~s~d~~~~---------~l~~~-----~~~~~~~v~-~-~~ 61 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK-P-LEI-IVVTDGDDEPYLS---------ILSQT-----VKYGGIFVI-T-VP 61 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC-C-CEE-EEEeCCCChHHHH---------HHHhh-----ccCCcEEEE-e-cC
Confidence 489999999999 99999999999998 4 444 3366778887766 44221 123445555 3 34
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
++||++|+|.|++.+ ++|+++++|+|+.++|++|++++..+. ++++++|++.....+.+.+.........+.....
T Consensus 62 ~~g~~~a~n~g~~~a---~~d~v~~lD~D~~~~~~~l~~l~~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (235)
T cd06434 62 HPGKRRALAEGIRHV---TTDIVVLLDSDTVWPPNALPEMLKPFE-DPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNE 137 (235)
T ss_pred CCChHHHHHHHHHHh---CCCEEEEECCCceeChhHHHHHHHhcc-CCCEeEEcCceEeecCcccHHHHHHHHHHHHHHH
Confidence 566999999999998 999999999999999999999999995 9999999999887776445544443322222222
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCC----------CCccchHHHHHHHHhCCCEEEEeccCcccccCCcC
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD----------RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPST 320 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~----------~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 320 (534)
.........+...+++|+++++||+++++.++..+ ...+||.+++.++.++||++.|.|++.++++.|.+
T Consensus 138 ~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 217 (235)
T cd06434 138 EIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTETPEN 217 (235)
T ss_pred HHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEEcchh
Confidence 22222333444556789999999999998753322 25689999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccchh
Q 044519 321 FKAYRYQQHRWSCGPS 336 (534)
Q Consensus 321 ~~~~~~Qr~RW~~G~~ 336 (534)
++++.+||.||.+|..
T Consensus 218 ~~~~~~q~~Rw~~~~~ 233 (235)
T cd06434 218 YKKFLKQQLRWSRSNW 233 (235)
T ss_pred HHHHHHHhhhhhhccc
Confidence 9999999999999975
|
Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. |
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-29 Score=255.55 Aligned_cols=228 Identities=18% Similarity=0.198 Sum_probs=163.7
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|+|||+||+|||++.+.+||+|+++|+||+. .+|+ |+|+|+|+|.+ ++++..++++. ..++++++
T Consensus 37 ~~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~-~eIIVVDd~StD~T~~---------i~~~~~~~~~~-~~~i~vi~ 105 (384)
T TIGR03469 37 EAWPAVVAVVPARNEADVIGECVTSLLEQDYPGK-LHVILVDDHSTDGTAD---------IARAAARAYGR-GDRLTVVS 105 (384)
T ss_pred CCCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCc-eEEEEEeCCCCCcHHH---------HHHHHHHhcCC-CCcEEEec
Confidence 5689999999999999999999999999999953 3444 55568888877 77766554321 23677775
Q ss_pred ecC---CCCCChhHHHHHHHhhhccC-----CcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhh
Q 044519 167 RKN---RNGYKAGALKEGLEKQYVKD-----CQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMT 238 (534)
Q Consensus 167 r~~---~~g~Ka~aln~gl~~a~~~~-----~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~ 238 (534)
.++ ..+||+.|+|.|+++| + +|+++++|+|+.++||+++++++.+ ++++++++++...... .++..
T Consensus 106 ~~~~~~g~~Gk~~A~n~g~~~A---~~~~~~gd~llflDaD~~~~p~~l~~lv~~~-~~~~~~~vs~~~~~~~--~~~~~ 179 (384)
T TIGR03469 106 GQPLPPGWSGKLWAVSQGIAAA---RTLAPPADYLLLTDADIAHGPDNLARLVARA-RAEGLDLVSLMVRLRC--ESFWE 179 (384)
T ss_pred CCCCCCCCcchHHHHHHHHHHH---hccCCCCCEEEEECCCCCCChhHHHHHHHHH-HhCCCCEEEecccccC--CCHHH
Confidence 332 2347999999999998 6 9999999999999999999999998 4556777777655433 22222
Q ss_pred HhHhhhcccc----hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 239 RLQEMSLDYH----FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 239 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
+......... +... .............|+++++||++++++|||++ ....||.+++.++.++|+++.+.+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~~ 258 (384)
T TIGR03469 180 KLLIPAFVFFFQKLYPFR-WVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAAR 258 (384)
T ss_pred HHHHHHHHHHHHHhcchh-hhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecCc
Confidence 2110000000 0000 01111112233479999999999999999986 457899999999999999999987655
Q ss_pred ccc-cCCcCHHHHHHHHhhhcc
Q 044519 313 VKN-ELPSTFKAYRYQQHRWSC 333 (534)
Q Consensus 313 ~~~-~~p~t~~~~~~Qr~RW~~ 333 (534)
... ...+++++.++|+.||..
T Consensus 259 ~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 259 TRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred eEEEEecCCHHHHHHHHHHhHH
Confidence 433 455688999999998733
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms. |
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=243.56 Aligned_cols=222 Identities=19% Similarity=0.314 Sum_probs=167.5
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-CCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN-RNG 172 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~-~~g 172 (534)
|+||+|||++.+++||+|+++|+||++..+|+|+|| |+|++.+ .++ ...+ ..+.+++++..+. .+.
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~---------~~~-~~~~--~~~~~v~~~~~~~~~~~ 68 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQ---------ILE-FAAA--KPNFQLKILNNSRVSIS 68 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHH---------HHH-HHHh--CCCcceEEeeccCcccc
Confidence 689999999999999999999999985555655655 7776665 554 2222 2356677775542 355
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
||+.++|.|++++ ++||++++|+|+.++|++|++++..+ .+++.+++++..... ...++.+..+..+........
T Consensus 69 g~~~a~n~g~~~~---~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (229)
T cd04192 69 GKKNALTTAIKAA---KGDWIVTTDADCVVPSNWLLTFVAFI-QKEQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLI 143 (229)
T ss_pred hhHHHHHHHHHHh---cCCEEEEECCCcccCHHHHHHHHHHh-hcCCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHH
Confidence 7999999999998 99999999999999999999999988 456677777776654 334555554433222211111
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCC--CccchHHHHHHHHhCCC-EEEEe--ccCcccccCCcCHHHHHHH
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR--TTVEDMDLAVRASLKGW-KFVFV--GDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED~~l~~rl~~~G~-ki~~~--~~~~~~~~~p~t~~~~~~Q 327 (534)
. .....+.....+|+++++||++++++|||++. ..+||.+++.++.++|+ ++.+. |++.++++.|.+++++.+|
T Consensus 144 ~-~~~~~~~~~~~~g~~~~~rr~~~~~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q 222 (229)
T cd04192 144 A-GSFGLGKPFMCNGANMAYRKEAFFEVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQ 222 (229)
T ss_pred h-hHHHhcCccccccceEEEEHHHHHHhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHH
Confidence 1 11112223345799999999999999999864 45899999999999999 88887 5677789999999999999
Q ss_pred Hhhhccc
Q 044519 328 QHRWSCG 334 (534)
Q Consensus 328 r~RW~~G 334 (534)
|.||++|
T Consensus 223 ~~Rw~~g 229 (229)
T cd04192 223 RKRWASK 229 (229)
T ss_pred HHHhhcC
Confidence 9999987
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=246.39 Aligned_cols=224 Identities=23% Similarity=0.250 Sum_probs=174.2
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|++||+||+|||++.+.++|+|+.+|+||+++.+|+|+|| |+|++.+ ++++..+ + +++++.
T Consensus 26 ~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~---------~~~~~~~----~--~v~~i~ 90 (251)
T cd06439 26 AYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAE---------IAREYAD----K--GVKLLR 90 (251)
T ss_pred CCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHH---------HHHHHhh----C--cEEEEE
Confidence 5678999999999999999999999999999986555555555 7776665 6654432 2 566664
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
. +++.||++|+|.|++++ ++|+++++|+|++++|++++++++.+ ++++++++++.....+++. ..........
T Consensus 91 ~-~~~~g~~~a~n~gi~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~ 163 (251)
T cd06439 91 F-PERRGKAAALNRALALA---TGEIVVFTDANALLDPDALRLLVRHF-ADPSVGAVSGELVIVDGGG--SGSGEGLYWK 163 (251)
T ss_pred c-CCCCChHHHHHHHHHHc---CCCEEEEEccccCcCHHHHHHHHHHh-cCCCccEEEeEEEecCCcc--cchhHHHHHH
Confidence 4 45566999999999999 89999999999999999999999999 6889999999887765542 1110000000
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHH
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~ 326 (534)
.. ................+|+++++||++++ ++++....||.+++.++.++|+++.+.|++.+++..|.+++++.+
T Consensus 164 ~~-~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---~~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 239 (251)
T cd06439 164 YE-NWLKRAESRLGSTVGANGAIYAIRRELFR---PLPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDGSEEFR 239 (251)
T ss_pred HH-HHHHHHHHhcCCeeeecchHHHhHHHHhc---CCCcccchhHHHHHHHHHHcCCeEEeccccEEEEeCcccHHHHHH
Confidence 00 00001111222334467888999999998 677778899999999999999999999999999999999999999
Q ss_pred HHhhhccchhh
Q 044519 327 QQHRWSCGPSN 337 (534)
Q Consensus 327 Qr~RW~~G~~~ 337 (534)
|+.||.+|.+|
T Consensus 240 ~~~r~~~g~~~ 250 (251)
T cd06439 240 RRVRIAAGNLQ 250 (251)
T ss_pred HHHHHHhcccc
Confidence 99999999976
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. |
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-29 Score=256.89 Aligned_cols=245 Identities=18% Similarity=0.200 Sum_probs=186.5
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCC-ceEEEEEcC-----CChhhhchhhhhhhHHHHHHHHHH------
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSD-RLIVQVLDD-----STNEVLRTDFFQYTQKLVELECLK------ 154 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~-~~~I~V~Dd-----s~D~t~~~~~~~~~~~~v~~~~~~------ 154 (534)
...+.+-.+||||||. +.+++||+|+..++||+. +++++|+|| +.|.++. +++-+...+
T Consensus 22 ~~~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp--------~~~l~~~~~~~~~~~ 93 (527)
T PF03142_consen 22 FPDKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTP--------EIVLDILGDFVDPPE 93 (527)
T ss_pred CCCceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChH--------HHHHHhhcccCCCcC
Confidence 3456788899999998 899999999999999976 566667888 3444444 233222220
Q ss_pred ------H--------------------hhcC-----------ccEEEEEe----------cCCCCCChhHHHHHHH----
Q 044519 155 ------W--------------------IEKG-----------VNVKYETR----------KNRNGYKAGALKEGLE---- 183 (534)
Q Consensus 155 ------~--------------------~~~~-----------~~v~~~~r----------~~~~g~Ka~aln~gl~---- 183 (534)
| ...+ .+..++.. .+.|.||.+.+-..+.
T Consensus 94 ~~~~~~~~~~~~g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~NrGKRDsq~~~~~fl~~ 173 (527)
T PF03142_consen 94 DPEPLSYVSLGEGSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNRGKRDSQILLMSFLNK 173 (527)
T ss_pred CCCCcceEEeccCchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccCCchHHHHHHHHHHHH
Confidence 0 0000 11111111 1334467776521111
Q ss_pred -------------------hh---hccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH
Q 044519 184 -------------------KQ---YVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ 241 (534)
Q Consensus 184 -------------------~a---~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~ 241 (534)
.. .....||++.+|||+.++||++.+++..+.+||++++++|.....|...++++..|
T Consensus 174 ~~~~~~~~~~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~~s~~t~~Q 253 (527)
T PF03142_consen 174 VHFNNPMTPLELELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKGQSWWTMYQ 253 (527)
T ss_pred HhcCCCCchHHHHHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCCCCHhhhee
Confidence 00 11457999999999999999999999999899999999999999999999999999
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh--------------CCCCC-----------CCccchHHHHH
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA--------------GGWKD-----------RTTVEDMDLAV 296 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~--------------Gg~~~-----------~~~~ED~~l~~ 296 (534)
..+|...+.......+..+.+.|++|++.++|-++.+.- .+|.+ ..++||..++.
T Consensus 254 ~fEY~ish~l~Ka~Es~fG~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~~lGEDR~Ltt 333 (527)
T PF03142_consen 254 VFEYAISHHLQKAFESVFGSVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLLDLGEDRWLTT 333 (527)
T ss_pred ccchhHHHHHHHHHHHHhCceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhhhcchhHHHHH
Confidence 999888888888888888999999999999999887651 12211 13699999999
Q ss_pred HHHhC--CCEEEEeccCcccccCCcCHHHHHHHHhhhccchhhHHh
Q 044519 297 RASLK--GWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFS 340 (534)
Q Consensus 297 rl~~~--G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~ 340 (534)
.+.++ |+|+.|+|++.+++.+|+|++.+.+||+||..|++....
T Consensus 334 LlLk~~~~~k~~y~~~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 334 LLLKQFPGYKTEYVPSAVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred HHHhhCCCceEEEcccccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 88887 799999999999999999999999999999999986543
|
4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups |
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-26 Score=222.74 Aligned_cols=395 Identities=16% Similarity=0.219 Sum_probs=258.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhhhhhchhhhhhcCCCCcEEEEEeccCch-H----HHHHHHHHHHcCC
Q 044519 43 CSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEK-E----VYKLSIGAACGLS 117 (534)
Q Consensus 43 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~-~----~l~~~L~sl~~q~ 117 (534)
..+..++..+...+...+..++-+..++.+.. + +.++.+. .....-.|++|+|||+ . -++.+-+|+.+..
T Consensus 101 ~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~-~--~~p~~p~--p~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg 175 (736)
T COG2943 101 VLFAVLFCWVSAGFWTALMGFLVLLFGRDRYL-S--IAPNEPL--PDLHRTAILMPIYNEDVNRVFAGLRATYESLAATG 175 (736)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheeecCCCcC-C--CCCCCCC--CcccceeEEeeccccCHHHHHHHHHHHHHHHHhhC
Confidence 33444555555555555544444443433221 1 1111111 2234589999999998 3 3566777776654
Q ss_pred CCCCceEEEEEcCCChhhhchhhhhhhHH-HHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEe
Q 044519 118 WPSDRLIVQVLDDSTNEVLRTDFFQYTQK-LVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIF 196 (534)
Q Consensus 118 yp~~~~~I~V~Dds~D~t~~~~~~~~~~~-~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~l 196 (534)
. .....++|..||.|+++.. +++ .-.+.|++.. ...+|-|.+|.++.+-|+||...-.+. ++..++|.+++
T Consensus 176 ~-~~~FD~FVLSDs~dpdial-----AEq~a~~~l~~e~~-g~~~ifYRrRr~n~~RKaGNIaDfcrR-wG~~Y~~MlVL 247 (736)
T COG2943 176 H-AEHFDFFVLSDSRDPDIAL-----AEQKAWAELCRELG-GEGNIFYRRRRRNVKRKAGNIADFCRR-WGSAYSYMLVL 247 (736)
T ss_pred C-cccceEEEEcCCCCchhhh-----hHHHHHHHHHHHhC-CCCceeeehHhhhhcccccCHHHHHHH-hCcccceEEEe
Confidence 3 2457788999999998871 111 1123455542 236788888888888899999999988 57799999999
Q ss_pred cCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc-chhhhhhcccccCccccccCCcchhhHH
Q 044519 197 DADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY-HFSVEQEVGSSTCQFFGFNGTAGVWRIQ 275 (534)
Q Consensus 197 DaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~Rr~ 275 (534)
|||++..+|++.++++.|+.||+.|++|+.....|.+ ++..|+|++.... .-.......-...+-.++-|.|.++|.+
T Consensus 248 DADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~-TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~ 326 (736)
T COG2943 248 DADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGGD-TLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTK 326 (736)
T ss_pred ecccccCchHHHHHHHHHhhCCCCceeecchhhcCcc-hHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeech
Confidence 9999999999999999999999999999999988875 7888888653211 0000000111112233457999999999
Q ss_pred HHHHhCC---------CCCCCccchHHHHHHHHhCCCEEEEeccCc-ccccCCcCHHHHHHHHhhhccchhhHHhhhhhh
Q 044519 276 AIEDAGG---------WKDRTTVEDMDLAVRASLKGWKFVFVGDLG-VKNELPSTFKAYRYQQHRWSCGPSNLFSKMTRE 345 (534)
Q Consensus 276 ~l~~~Gg---------~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~ 345 (534)
++.+..| |..+.++.|.--+..+++.||.+...++.. .|+|.|.|+-++.++-+||+.|++|.++
T Consensus 327 aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~r----- 401 (736)
T COG2943 327 AFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYDLDGSYEELPPNLLDELKRDRRWCHGNLQHFR----- 401 (736)
T ss_pred hhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhcCceEEEeccCCCchhhCCchHHHHHhhhhHhhhcchhhce-----
Confidence 9998755 444556889999999999999999998765 6899999999999999999999999765
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh--------hhhccc---cchhH-------------HHH
Q 044519 346 IILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYC-IVIPT--------SVLVPE---IQLTK-------------PIA 400 (534)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~--------~~l~~~---~~~~~-------------~~~ 400 (534)
++..+++++..+.+++.+..- .+.+|+..++..+ +.++. .+.-|. ..+|. +.+
T Consensus 402 l~~~~GlHwvsR~h~~tGVms--YlsaPlWfl~ll~g~al~~~~~l~~p~yFt~p~qlfp~wp~~~~~~a~~lf~~Tm~l 479 (736)
T COG2943 402 LFLVKGLHWVSRAHFLTGVMS--YLSAPLWFLFLLLGTALQAVHALTEPQYFTQPRQLFPVWPQWRPELAIALFAITMVL 479 (736)
T ss_pred eeccCCccHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHhHhhhchhhhcChHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 346788999999987754332 1223332211111 11111 111011 01111 123
Q ss_pred HHHHHHHHHHHHhhccc---hh---HH--------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCC
Q 044519 401 IYIPATITLLNAVCTPR---SF---HL--------IVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHG 460 (534)
Q Consensus 401 ~~l~~~~~~~~~~~~~~---~~---~~--------~~~~~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~ 460 (534)
+++|-+++++..+.++. .+ .. ..+..+..+++.+.++.++++.++ |++..|.-.+|..
T Consensus 480 Lf~PKil~~~ll~~k~~~~k~~GG~~Rv~ls~~lE~llSaL~APv~Ml~htr~Vv~~l~--G~~~gW~sq~RDd 551 (736)
T COG2943 480 LFLPKLLSILLLWAKKGGTKEFGGALRVTLSLLLEVLLSALLAPVRMLFHTRFVVSALL--GWDVGWNSQQRDD 551 (736)
T ss_pred HHhHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccCcCCCCCCC
Confidence 45566665555443311 11 11 133445566677888999999999 9999999888853
|
|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-25 Score=239.39 Aligned_cols=273 Identities=19% Similarity=0.239 Sum_probs=191.1
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-C------------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-T------------------------------ 132 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~------------------------------ 132 (534)
+++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 328 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRA 328 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 5699999999885 454 4678999999999999999999999984 2
Q ss_pred ---------hhh---hc----------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 133 ---------NEV---LR----------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 133 ---------D~t---~~----------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
|.. .. ..+||.....++...++ .++
T Consensus 329 Pe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~ 408 (977)
T PLN02195 329 PEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGET 408 (977)
T ss_pred HHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCC
Confidence 111 00 02333333333322211 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|.+++.+. ..++++|+.+|||+.+ +++++++.+.+| .|| +
T Consensus 409 ~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~-~D~~~g~~ 487 (977)
T PLN02195 409 GARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFL-MDPVVGRD 487 (977)
T ss_pred CCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhc-cCcccCCe
Confidence 114567888887766 59999999998753 3689999999999877 558999999998 677 7
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG------------------ 281 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G------------------ 281 (534)
++.||.++.+.|.+.+-. . .-.....|...+..... ..-+.+.|+++++||+++-..+
T Consensus 488 va~VQ~PQ~F~~i~~~D~--y-~~~~~~ffd~~~~g~dg-lqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~ 563 (977)
T PLN02195 488 VCYVQFPQRFDGIDRSDR--Y-ANRNVVFFDVNMKGLDG-IQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCC 563 (977)
T ss_pred eEEEcCCcccCCCCCCCC--C-Ccccceeeeeeeccccc-cCCccccccCceeeehhhhccCcccccccccccccccccc
Confidence 889999999987654310 0 01112233344433322 2334456777777777765321
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~ 643 (977)
T PLN02195 564 CPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTL 643 (977)
T ss_pred ccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHH
Confidence
Q ss_pred ----------------------CCCCCCccchHHHHHHHHhCCCEEEEecc--CcccccCCcCHHHHHHHHhhhccchhh
Q 044519 282 ----------------------GWKDRTTVEDMDLAVRASLKGWKFVFVGD--LGVKNELPSTFKAYRYQQHRWSCGPSN 337 (534)
Q Consensus 282 ----------------------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 337 (534)
||.-++++||...+++++.+|||.+|++. ....+.+|.|+.++..||.||+.|.+|
T Consensus 644 l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lq 723 (977)
T PLN02195 644 IKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVE 723 (977)
T ss_pred HHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhh
Confidence 22223469999999999999999999864 346799999999999999999999999
Q ss_pred HHhhhhhhhhh---cCCCChhHHHHHHHHHH
Q 044519 338 LFSKMTREIIL---CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 338 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 365 (534)
++......++. .+++++.+++.++...+
T Consensus 724 I~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~l 754 (977)
T PLN02195 724 IFLSRHCPLWYGYGGGRLKWLQRLAYINTIV 754 (977)
T ss_pred hhhccCCccccccCCCCCCHHHHHHHHHHHH
Confidence 98743334432 36799999998775544
|
|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-26 Score=242.78 Aligned_cols=273 Identities=17% Similarity=0.229 Sum_probs=190.8
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
.++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 328 ~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 407 (1040)
T PLN02189 328 NMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRA 407 (1040)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 3599999999885 455 5678999999999999999999999984 21111
Q ss_pred ----------------c----------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 137 ----------------R----------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 137 ----------------~----------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
. ..+||.....++...++ .+.
T Consensus 408 Pe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~ 487 (1040)
T PLN02189 408 PEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 487 (1040)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCC
Confidence 0 01223222222222100 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|..++.+. ..+++||+.+|+|+.+ +|+.+++.+.+| .|| +
T Consensus 488 ~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCff-lDp~~g~~ 566 (1040)
T PLN02189 488 GGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFL-MDPQIGRK 566 (1040)
T ss_pred CCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhh-cCCccCce
Confidence 012388999988776 69999999997653 2699999999999999 679999999998 577 8
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG------------------ 281 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G------------------ 281 (534)
++.||.++.+.|-+.+-.-. ......|...+... +...-+.+.|+++++||+++-...
T Consensus 567 vAfVQFPQrF~~i~k~D~Yg---n~~~vffdi~~~Gl-DGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~ 642 (1040)
T PLN02189 567 VCYVQFPQRFDGIDTHDRYA---NRNTVFFDINMKGL-DGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPC 642 (1040)
T ss_pred eEEEeCccccCCCCCCCccC---Cccceeeeeeeccc-ccCCCccccccCceeeeeeeeccCcccccccccccccchhhh
Confidence 99999999988765431100 01112233333322 222333456777777776654210
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 722 (1040)
T PLN02189 643 FGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYED 722 (1040)
T ss_pred cccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhcccccc
Confidence
Q ss_pred --------CCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhh---
Q 044519 282 --------GWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIIL--- 348 (534)
Q Consensus 282 --------g~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--- 348 (534)
||.-++++||..++++++.+|||.+|+. .+...+.+|.|+.++..||.||+.|.+|++......++.
T Consensus 723 ~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~ 802 (1040)
T PLN02189 723 KTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYK 802 (1040)
T ss_pred CCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccC
Confidence 2333457999999999999999999994 455679999999999999999999999998754344442
Q ss_pred cCCCChhHHHHHHHHHH
Q 044519 349 CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 349 ~~~~~~~~~~~~~~~~~ 365 (534)
.+++++.+++.++...+
T Consensus 803 ~~~L~l~QRL~Yl~~~l 819 (1040)
T PLN02189 803 GGNLKWLERFAYVNTTI 819 (1040)
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 35689999998775544
|
|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=230.34 Aligned_cols=230 Identities=18% Similarity=0.237 Sum_probs=172.3
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEc-CCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLD-DSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D-ds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
++||+||+|||++.+.++|+|+.+|+||....+|+|+| +|+|++.+ .+++..+ +...++++.. +
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~---------~~~~~~~----~~~~v~~i~~--~ 65 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTRE---------IVQEYAA----KDPRIRLIDN--P 65 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHH---------HHHHHHh----cCCeEEEEeC--C
Confidence 48999999999999999999999999974444555555 57776665 6655433 3456777743 3
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
++|+++|+|.|++.+ ++||++++|+|+.++|++|+++++.+ ++++.+++++.....+.+. ...... ......+.
T Consensus 66 ~~~~~~a~N~g~~~a---~~d~v~~lD~D~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~~-~~~~~~~~ 139 (249)
T cd02525 66 KRIQSAGLNIGIRNS---RGDIIIRVDAHAVYPKDYILELVEAL-KRTGADNVGGPMETIGESK-FQKAIA-VAQSSPLG 139 (249)
T ss_pred CCCchHHHHHHHHHh---CCCEEEEECCCccCCHHHHHHHHHHH-hcCCCCEEecceecCCCCh-HHHHHH-HHhhchhc
Confidence 445899999999999 99999999999999999999999988 6678888887765443321 111111 11111111
Q ss_pred hhhh--cccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 251 VEQE--VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 251 ~~~~--~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.... ............|+++++||++++++|+|++. ..+||.+++.|+.++|+++.++|++.+++..+.+++++.+|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~s~~~~~~~ 219 (249)
T cd02525 140 SGGSAYRGGAVKIGYVDTVHHGAYRREVFEKVGGFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTLKKLARQ 219 (249)
T ss_pred cCCccccccccccccccccccceEEHHHHHHhCCCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcCCCCHHHHHHH
Confidence 1000 00011102235788899999999999999875 34799999999999999999999999999999999999999
Q ss_pred HhhhccchhhHHhhh
Q 044519 328 QHRWSCGPSNLFSKM 342 (534)
Q Consensus 328 r~RW~~G~~~~~~~~ 342 (534)
+.||..|..+..+++
T Consensus 220 ~~r~~~~~~~~~~~~ 234 (249)
T cd02525 220 YFRYGKWRARTLRKH 234 (249)
T ss_pred HHHHhhhhHHHHHhC
Confidence 999999999988765
|
Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. |
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-26 Score=245.81 Aligned_cols=200 Identities=19% Similarity=0.279 Sum_probs=145.9
Q ss_pred cEEEEEecCCCC----CChhHHHHHHHhhhc-cCCcEEEEecCCCCC-CHHHHHHHHHHHhcC---CcEEEEeeeeEeec
Q 044519 161 NVKYETRKNRNG----YKAGALKEGLEKQYV-KDCQFVVIFDADFQP-DEDFLWRTIPYLLEN---KELGLVQARWKFVN 231 (534)
Q Consensus 161 ~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~---~~v~~V~~~~~~~n 231 (534)
.+.|+.|+++.| .||||+|..++.+.. .+++||+.+|||+.+ +++.+++.+.+| .| ++++.||.++++.|
T Consensus 586 ~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~-lD~~g~~vAfVQFPQrF~~ 664 (1135)
T PLN02248 586 MLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFM-MDRGGDRICYVQFPQRFEG 664 (1135)
T ss_pred eeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchhe-ecCCCCceEEEcCCcccCC
Confidence 356777776665 699999999985532 699999999999887 777999999999 45 79999999999887
Q ss_pred CCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC------------------------------
Q 044519 232 ADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG------------------------------ 281 (534)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G------------------------------ 281 (534)
-+.+-.-. ......|...+... +...-..+.|+++++||+++-..+
T Consensus 665 I~k~D~Yg---n~~~Vffdi~~~Gl-DGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1135)
T PLN02248 665 IDPSDRYA---NHNTVFFDVNMRAL-DGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPE 740 (1135)
T ss_pred CCCCCccC---Ccceeeeeeeeccc-cccCCccccccCceeeehhhcCcCCccccccccccccccccccccccccccccc
Confidence 65431100 01112233333322 222333456777777777664210
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 741 ~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 820 (1135)
T PLN02248 741 EQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYED 820 (1135)
T ss_pred ccccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhccccccc
Confidence
Q ss_pred --------CCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhhcCC
Q 044519 282 --------GWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCER 351 (534)
Q Consensus 282 --------g~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~ 351 (534)
||..++++||...+++++.+|||.+|+. .....+.+|+++.++..||.||+.|.+|++......++..++
T Consensus 821 ~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~ 900 (1135)
T PLN02248 821 KTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRR 900 (1135)
T ss_pred CCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccCCC
Confidence 2233347999999999999999999983 445679999999999999999999999998765455566678
Q ss_pred CChhHHHHHHHHHH
Q 044519 352 VSVWKRLYLIYAFF 365 (534)
Q Consensus 352 ~~~~~~~~~~~~~~ 365 (534)
+++.+++.++...+
T Consensus 901 Lsl~QRL~Yl~~~l 914 (1135)
T PLN02248 901 LKFLQRIAYLNVGI 914 (1135)
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999775433
|
|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=241.84 Aligned_cols=273 Identities=18% Similarity=0.221 Sum_probs=189.7
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
+++|.|.|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 425 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 4699999999885 454 4678999999999999999999999984 21111
Q ss_pred ----------------c----------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 137 ----------------R----------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 137 ----------------~----------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
. ..+||.....++...++ .+.
T Consensus 426 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~ 505 (1079)
T PLN02638 426 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 505 (1079)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCC
Confidence 0 01333333223222211 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCc----
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKE---- 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~---- 219 (534)
.-+++.|+.|+++.| .||||+|..++.+. ..+++||+.+|+|+.+ +|+.+++.+.+| -||+
T Consensus 506 ~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~-lDp~~g~~ 584 (1079)
T PLN02638 506 GGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFL-MDPNLGKS 584 (1079)
T ss_pred CccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhh-cCcccCCe
Confidence 113458899988776 69999999997663 2699999999999877 599999999998 5775
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh------------------C
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA------------------G 281 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~------------------G 281 (534)
++.||.++++.|-+.+-.-. ......|...+... +...-+.+.|+++++||+++-.. |
T Consensus 585 vafVQFPQrF~~i~k~D~Yg---n~~~vffdi~~~Gl-DGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~ 660 (1079)
T PLN02638 585 VCYVQFPQRFDGIDRNDRYA---NRNTVFFDINLRGL-DGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCG 660 (1079)
T ss_pred eEEecCCcccCCCCCCCccc---ccceeeeccccccc-cccCCccccccCcceeehhhcCcCCccccccccccccccccc
Confidence 88999999988765431100 01112233333322 22333445677777777776522 0
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~ 740 (1079)
T PLN02638 661 GSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQ 740 (1079)
T ss_pred ccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCC
Confidence
Q ss_pred -----------------------------CCCCCCccchHHHHHHHHhCCCEEEEe-ccC-cccccCCcCHHHHHHHHhh
Q 044519 282 -----------------------------GWKDRTTVEDMDLAVRASLKGWKFVFV-GDL-GVKNELPSTFKAYRYQQHR 330 (534)
Q Consensus 282 -----------------------------g~~~~~~~ED~~l~~rl~~~G~ki~~~-~~~-~~~~~~p~t~~~~~~Qr~R 330 (534)
||.-++++||..++++++.+|||.+|+ |+. ...+.+|.++.++..||.|
T Consensus 741 ~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~R 820 (1079)
T PLN02638 741 SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR 820 (1079)
T ss_pred CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHH
Confidence 122234799999999999999999999 543 4579999999999999999
Q ss_pred hccchhhHHhhhhhhhhh--cCCCChhHHHHHHHHHH
Q 044519 331 WSCGPSNLFSKMTREIIL--CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 331 W~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 365 (534)
|+.|.+|++......++. ++++++.+++.++...+
T Consensus 821 WA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~ 857 (1079)
T PLN02638 821 WALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTI 857 (1079)
T ss_pred HhhcchheeeccCCccccccCCCCCHHHHHHHHHHHH
Confidence 999999998643333442 46899999998775443
|
|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-24 Score=233.89 Aligned_cols=273 Identities=19% Similarity=0.223 Sum_probs=184.0
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
+++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRa 432 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRA 432 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCC
Confidence 4699999999885 454 4678999999999999999999999984 21111
Q ss_pred --------------c------------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 137 --------------R------------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 137 --------------~------------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
. ..+||.....++...++ .++
T Consensus 433 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~ 512 (1085)
T PLN02400 433 PEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHS 512 (1085)
T ss_pred HHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCC
Confidence 0 01333333333322200 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|..++.+. ..++.||+-+|+|+.. +|+.+++.+..|. || +
T Consensus 513 ~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~l-D~~~g~~ 591 (1085)
T PLN02400 513 GGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMM-DPAIGKK 591 (1085)
T ss_pred CCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhhee-ccCCCce
Confidence 114567888988776 69999999999653 3799999999999888 9999999999884 55 7
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHH---------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIE--------------------- 278 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~--------------------- 278 (534)
++.||-++++.|-+.+-.-.- .....|..... +-+...-+.+.|+++++||+++-
T Consensus 592 ~afVQFPQrF~gi~~~D~Y~n---~~~vffdi~~~-GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~ 667 (1085)
T PLN02400 592 TCYVQFPQRFDGIDLHDRYAN---RNIVFFDINLK-GLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCC 667 (1085)
T ss_pred eEEEeCCcccCCCCCCCCccc---ceeEEeecccc-ccccCCCccccccCcceeeeeeccCCCccccccccccccccccc
Confidence 999999999876543310000 00001111111 11111111223333333333332
Q ss_pred --------------------------------------------------------------------------------
Q 044519 279 -------------------------------------------------------------------------------- 278 (534)
Q Consensus 279 -------------------------------------------------------------------------------- 278 (534)
T Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~ 747 (1085)
T PLN02400 668 GSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPST 747 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCC
Confidence
Q ss_pred -------Hh-----------------CCCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhc
Q 044519 279 -------DA-----------------GGWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWS 332 (534)
Q Consensus 279 -------~~-----------------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~ 332 (534)
++ -||--++++||..++++++.+|||.+|+. .+...+.+|+++.++..||.||+
T Consensus 748 ~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA 827 (1085)
T PLN02400 748 NPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWA 827 (1085)
T ss_pred CcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHh
Confidence 10 03333567999999999999999999994 55678999999999999999999
Q ss_pred cchhhHHhhhhhhhhh--cCCCChhHHHHHHHHHH
Q 044519 333 CGPSNLFSKMTREIIL--CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 333 ~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 365 (534)
.|.+|++......++. .+++++.+++.++...+
T Consensus 828 ~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~ 862 (1085)
T PLN02400 828 LGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIV 862 (1085)
T ss_pred hcchheeeccCCccccccCCCCCHHHHHHHHHHHH
Confidence 9999998754334553 47899999998776544
|
|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-24 Score=228.26 Aligned_cols=305 Identities=19% Similarity=0.296 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhhhhchhhh-hhcCCCCcEEEEEeccC---ch-HHHHHHHHHHHcCCCCCC
Q 044519 47 SLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDL-ELNKSYPMVLVQIPMYN---EK-EVYKLSIGAACGLSWPSD 121 (534)
Q Consensus 47 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~VsViIP~yn---e~-~~l~~~L~sl~~q~yp~~ 121 (534)
++..+++..+..+..+.....+.+|.++.. .++.. +.-+++|.|+|.|+++| |+ .....|+-|+++.|||.+
T Consensus 51 W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~---~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~e 127 (756)
T PLN02190 51 WLVAFLCESCFSFVWLLITCIKWSPAEYKP---YPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPAN 127 (756)
T ss_pred HHHHHHHHHHHHHHHHHhccceeeecCCCC---CcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCcc
Confidence 344556666666555444444444544421 11111 11146899999999999 88 788999999999999999
Q ss_pred ceEEEEEcCCC-hhhh--------------------------------------c-----------hhhhhhhHHHHHHH
Q 044519 122 RLIVQVLDDST-NEVL--------------------------------------R-----------TDFFQYTQKLVELE 151 (534)
Q Consensus 122 ~~~I~V~Dds~-D~t~--------------------------------------~-----------~~~~~~~~~~v~~~ 151 (534)
++-++|.||+. .-|. . ..+||.....++..
T Consensus 128 klscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a 207 (756)
T PLN02190 128 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDA 207 (756)
T ss_pred ccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999852 1111 0 01222222222211
Q ss_pred H------------HHHh------------------------hcCccEEEEEecCCCC----CChhHHHHHHHhhhc-cCC
Q 044519 152 C------------LKWI------------------------EKGVNVKYETRKNRNG----YKAGALKEGLEKQYV-KDC 190 (534)
Q Consensus 152 ~------------~~~~------------------------~~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~ 190 (534)
. +.+. .+-+++.|+.|+++.+ .||||+|..++.+.. .++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNa 287 (756)
T PLN02190 208 TGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNA 287 (756)
T ss_pred ccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccC
Confidence 0 0000 0114467888877665 699999999987643 799
Q ss_pred cEEEEecCCCCC-CHHHHHHHHHHHhcCC----cEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccc
Q 044519 191 QFVVIFDADFQP-DEDFLWRTIPYLLENK----ELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGF 265 (534)
Q Consensus 191 d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (534)
++|+.+|+|+.. +|+.+++.+..|..++ +++.||-++.+.+.-.|-.+... ..... +-+...-+..
T Consensus 288 P~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~D~y~n~~~v~f--------~~~~~-GldGlqGP~Y 358 (756)
T PLN02190 288 PYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFYDSNTNELTVLQ--------SYLGR-GIAGIQGPIY 358 (756)
T ss_pred CeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhccccCccceEEE--------EEeec-cccccCCccc
Confidence 999999999866 9999999999985332 68999999987543222111110 00000 0011111112
Q ss_pred cCCcchhhHHH------------------------------------------------------------HHHh-----
Q 044519 266 NGTAGVWRIQA------------------------------------------------------------IEDA----- 280 (534)
Q Consensus 266 ~G~~~~~Rr~~------------------------------------------------------------l~~~----- 280 (534)
.|+++++||++ ++++
T Consensus 359 vGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~s 438 (756)
T PLN02190 359 IGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGH 438 (756)
T ss_pred ccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcc
Confidence 23333333222 2221
Q ss_pred ------------CCCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhh
Q 044519 281 ------------GGWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREI 346 (534)
Q Consensus 281 ------------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~ 346 (534)
-||..++++||..++++++.+|||.+|+. .+...+..|.++.+...||+||+.|.+|++......+
T Consensus 439 C~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl 518 (756)
T PLN02190 439 CHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPL 518 (756)
T ss_pred cCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCc
Confidence 15666678999999999999999999985 3345688999999999999999999999977643444
Q ss_pred hh--cCCCChhHHHHHHHH
Q 044519 347 IL--CERVSVWKRLYLIYA 363 (534)
Q Consensus 347 ~~--~~~~~~~~~~~~~~~ 363 (534)
+. .+++++.+++.++..
T Consensus 519 ~~g~~~~L~l~QRLaYl~~ 537 (756)
T PLN02190 519 IGMFCRKIRFRQRLAYLYV 537 (756)
T ss_pred eeccCCCCCHHHHHHHHHH
Confidence 43 478999999987643
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-24 Score=229.86 Aligned_cols=273 Identities=19% Similarity=0.259 Sum_probs=181.1
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
+++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRa 441 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRA 441 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 5699999999885 454 5678999999999999999999999984 21111
Q ss_pred ----------------c----------hhhhhhhHHHHHHHHHH--------Hh-h------------------------
Q 044519 137 ----------------R----------TDFFQYTQKLVELECLK--------WI-E------------------------ 157 (534)
Q Consensus 137 ----------------~----------~~~~~~~~~~v~~~~~~--------~~-~------------------------ 157 (534)
. ..+||.....++...++ +. +
T Consensus 442 Pe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~ 521 (1094)
T PLN02436 442 PEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHS 521 (1094)
T ss_pred HHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCC
Confidence 0 01333333333332221 00 0
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhhc-cCCcEEEEecCCCC-CCHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQYV-KDCQFVVIFDADFQ-PDEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|..++.+.. .+++||+-+|+|+. -+|+.+++.+..| -|| +
T Consensus 522 ~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfl-lD~~~g~~ 600 (1094)
T PLN02436 522 GVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFM-MDPQSGKK 600 (1094)
T ss_pred CCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhh-cCCccCCe
Confidence 114567888887775 699999999987644 78999999999985 4999999999998 465 8
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHH---------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIE--------------------- 278 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~--------------------- 278 (534)
++.||-++++.|-+.+-.-.- .....|..... +-+...-+.+.|+++++||+++-
T Consensus 601 ~afVQFPQrF~gi~k~D~Y~n---~~~vffdi~~~-GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~ 676 (1094)
T PLN02436 601 ICYVQFPQRFDGIDRHDRYSN---RNVVFFDINMK-GLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKW 676 (1094)
T ss_pred eEEEcCCcccCCCCCCCcccc---cceEeeecccc-ccccCCCccccccCceeeeeeeeccCCccccccccccccccccc
Confidence 999999999877643310000 00000111110 00001111122222222222211
Q ss_pred --------------------------------------------------------------------------------
Q 044519 279 -------------------------------------------------------------------------------- 278 (534)
Q Consensus 279 -------------------------------------------------------------------------------- 278 (534)
T Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~ 756 (1094)
T PLN02436 677 CCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPR 756 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCC
Confidence
Q ss_pred ---------------------------HhCCCCCCCccchHHHHHHHHhCCCEEEEe-ccCc-ccccCCcCHHHHHHHHh
Q 044519 279 ---------------------------DAGGWKDRTTVEDMDLAVRASLKGWKFVFV-GDLG-VKNELPSTFKAYRYQQH 329 (534)
Q Consensus 279 ---------------------------~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~-~~~~-~~~~~p~t~~~~~~Qr~ 329 (534)
++ ||--++++||..++++++.+|||.+|+ |+.. ..+.+|.++.++..||.
T Consensus 757 ~~~~~s~l~eA~~V~sC~YE~~T~WG~ev-GwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~ 835 (1094)
T PLN02436 757 NASPASLLREAIQVISCGYEDKTEWGKEI-GWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVL 835 (1094)
T ss_pred CCCcHHHHHHHHHhhcCCCcccChhhHhh-CeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHH
Confidence 11 344456799999999999999999998 5553 57999999999999999
Q ss_pred hhccchhhHHhhhhhhhh--hcCCCChhHHHHHHHHHHH
Q 044519 330 RWSCGPSNLFSKMTREII--LCERVSVWKRLYLIYAFFI 366 (534)
Q Consensus 330 RW~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 366 (534)
||+.|.+|++......++ ..+++++.+++.++...++
T Consensus 836 RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly 874 (1094)
T PLN02436 836 RWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVY 874 (1094)
T ss_pred HHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHH
Confidence 999999999865333444 2467999999987755443
|
|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-24 Score=228.84 Aligned_cols=84 Identities=21% Similarity=0.378 Sum_probs=69.3
Q ss_pred CCCCCCccchHHHHHHHHhCCCEEEEec-c-CcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhh--cCCCChhHH
Q 044519 282 GWKDRTTVEDMDLAVRASLKGWKFVFVG-D-LGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIIL--CERVSVWKR 357 (534)
Q Consensus 282 g~~~~~~~ED~~l~~rl~~~G~ki~~~~-~-~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--~~~~~~~~~ 357 (534)
||.-++++||..++++++.+|||.+|+. + +...+.+|.++.++..||.||+.|.+|++.+....++. .+++++.++
T Consensus 734 Gw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QR 813 (1044)
T PLN02915 734 GWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLER 813 (1044)
T ss_pred CccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHH
Confidence 3555678999999999999999999994 4 34569999999999999999999999998865444553 478999999
Q ss_pred HHHHHHHH
Q 044519 358 LYLIYAFF 365 (534)
Q Consensus 358 ~~~~~~~~ 365 (534)
+.++...+
T Consensus 814 L~Yl~~~~ 821 (1044)
T PLN02915 814 LAYINTIV 821 (1044)
T ss_pred HHHHHHHH
Confidence 99776544
|
|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=222.43 Aligned_cols=209 Identities=16% Similarity=0.105 Sum_probs=145.4
Q ss_pred EEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 94 LVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 94 sViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
||+||+|||+ +.+.+||+|+.+|+++....+|+ |+|+|+|++.+ .+.+... .....++++++. +++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~---------~~~~~~~--~~~~~~v~vi~~-~~n 68 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELK---------LLLEEYY--KKYLPKVKVLRL-KKR 68 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHH---------HHHHHHH--hhcCCcEEEEEc-CCC
Confidence 6999999999 99999999999999876432333 55668898887 4433111 123457888854 455
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHh-------Hhhh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRL-------QEMS 244 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~-------~~~~ 244 (534)
.|++.|+|.|+++| +||||+++|+|+.++|+||+++++.+.++|.. ++++.....+.+....... ....
T Consensus 69 ~G~~~a~N~g~~~A---~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~-~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (299)
T cd02510 69 EGLIRARIAGARAA---TGDVLVFLDSHCEVNVGWLEPLLARIAENRKT-VVCPIIDVIDADTFEYRGSSGDARGGFDWS 144 (299)
T ss_pred CCHHHHHHHHHHHc---cCCEEEEEeCCcccCccHHHHHHHHHHhCCCe-EEEeeeccccCCCeeEecCCCceeEEeccc
Confidence 66999999999999 99999999999999999999999999766654 5554433222211000000 0000
Q ss_pred cccchh-hh-----hhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCcccc
Q 044519 245 LDYHFS-VE-----QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 245 ~~~~~~-~~-----~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
+...+. .. ............++|+++++||++++++|||++... .||.|++.|+.++|+++.++|++.+.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H 224 (299)
T cd02510 145 LHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGH 224 (299)
T ss_pred ceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEE
Confidence 000000 00 000011122334579999999999999999998653 599999999999999999999999876
Q ss_pred cCC
Q 044519 316 ELP 318 (534)
Q Consensus 316 ~~p 318 (534)
...
T Consensus 225 ~~~ 227 (299)
T cd02510 225 IFR 227 (299)
T ss_pred ecc
Confidence 443
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. |
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=207.20 Aligned_cols=180 Identities=22% Similarity=0.265 Sum_probs=138.2
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||+|||++.+.+||+|+.+|+||..+.+|+ |+|+|+|+|.+ ++++. +..+. ....++++|
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~---------~~~~~-------~~~~~-~~~~~~~~g 63 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQ---------VARAA-------GATVL-ERHDPERRG 63 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHH---------HHHHc-------CCeEE-EeCCCCCCC
Confidence 68999999999999999999999986555554 45668888777 55432 22232 223345667
Q ss_pred ChhHHHHHHHhhh--ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhh
Q 044519 174 KAGALKEGLEKQY--VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 174 Ka~aln~gl~~a~--~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 251 (534)
|++|+|.|++++. ..++|+++++|+|+.++|+++.+++..+.+ +.++|++.....+.+.++.++.+...+......
T Consensus 64 k~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~--~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (183)
T cd06438 64 KGYALDFGFRHLLNLADDPDAVVVFDADNLVDPNALEELNARFAA--GARVVQAYYNSKNPDDSWITRLYAFAFLVFNRL 141 (183)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhh--CCCeeEEEEeeeCCccCHHHHHHHHHHHHHHHH
Confidence 9999999999872 236999999999999999999999999943 346788887777766678887776555444444
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHH
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDL 294 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l 294 (534)
.+......+....+.|+++++||+++++ |||++.+++||.|+
T Consensus 142 ~~~~~~~~~~~~~~~G~~~~~rr~~l~~-~g~~~~~l~ED~~~ 183 (183)
T cd06438 142 RPLGRSNLGLSCQLGGTGMCFPWAVLRQ-APWAAHSLTEDLEF 183 (183)
T ss_pred HHHHHHHcCCCeeecCchhhhHHHHHHh-CCCCCCCcccccCC
Confidence 4444444555566789999999999999 89999999999874
|
The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier. |
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=207.00 Aligned_cols=197 Identities=18% Similarity=0.271 Sum_probs=146.0
Q ss_pred CcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|++||+||+|||+ +.+++||+|+.+|++++.+++| |+|+|+|++.+ ++++.+.+ +..+++++.. +
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiiv-vd~gs~d~~~~--------~~~~~~~~----~~~~~~~~~~-~ 66 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWELCI-ADDASTDPEVK--------RVLKKYAA----QDPRIKVVFR-E 66 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEE-EeCCCCChHHH--------HHHHHHHh----cCCCEEEEEc-c
Confidence 6799999999999 9999999999999998755433 55668887776 45544332 3456766644 4
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccch
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHF 249 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 249 (534)
.+.|++.++|.|++.+ ++||++++|+|+.++|++++++++.+.++|+++++.+.......+........ ...+
T Consensus 67 ~~~g~~~a~n~g~~~a---~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~ 139 (202)
T cd04184 67 ENGGISAATNSALELA---TGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFF----KPDW 139 (202)
T ss_pred cCCCHHHHHHHHHHhh---cCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEecccc----CCCC
Confidence 5566999999999998 99999999999999999999999998778899888776543322211110000 0000
Q ss_pred hhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
.... .....+.|+++++||++++++|||++.. .+||.|++.|+.++|+++.++|++...
T Consensus 140 ~~~~------~~~~~~~~~~~~~~r~~~~~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 140 SPDL------LLSQNYIGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred CHHH------hhhcCCccceEeEEHHHHHHhCCCCcCcccchhHHHHHHHHhccceEEEccHhhhh
Confidence 0000 0011245777899999999999998753 589999999999999999999987653
|
The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=203.57 Aligned_cols=197 Identities=21% Similarity=0.258 Sum_probs=146.5
Q ss_pred EEEEeccCch--HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 94 LVQIPMYNEK--EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 94 sViIP~yne~--~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
||+||+||++ +.+++||+|+.+|+|++.++ |+|+|+|++++.. ++++++.++ .+++++..+ .+
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~ei-iivdd~ss~d~t~--------~~~~~~~~~-----~~i~~i~~~-~n 65 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEV-VLVKDGPVTQSLN--------EVLEEFKRK-----LPLKVVPLE-KN 65 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEE-EEEECCCCchhHH--------HHHHHHHhc-----CCeEEEEcC-cc
Confidence 6999999997 58999999999999997654 3366776454444 366655443 237777554 44
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 251 (534)
.|+++|+|.|++++ +|||++++|+|++++|+++++++..+.++|+++++++.....+.+........ .. ......
T Consensus 66 ~G~~~a~N~g~~~a---~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 140 (201)
T cd04195 66 RGLGKALNEGLKHC---TYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR-LP-TSHDDI 140 (201)
T ss_pred ccHHHHHHHHHHhc---CCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc-CC-CCHHHH
Confidence 56999999999998 99999999999999999999999999888999999998776544332111000 00 000000
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
... ......+.++++++||++++++|||++....||+++..|+..+|+++.++|++.++
T Consensus 141 ~~~----~~~~~~~~~~~~~~rr~~~~~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~~~~ 199 (201)
T cd04195 141 LKF----ARRRSPFNHPTVMFRKSKVLAVGGYQDLPLVEDYALWARMLANGARFANLPEILVK 199 (201)
T ss_pred HHH----hccCCCCCChHHhhhHHHHHHcCCcCCCCCchHHHHHHHHHHcCCceecccHHHhh
Confidence 000 00111245778899999999999999888899999999999999999999987754
|
AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.8e-25 Score=202.91 Aligned_cols=179 Identities=21% Similarity=0.278 Sum_probs=140.6
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--CCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK--NRNG 172 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~--~~~g 172 (534)
|+||+|||++.+.+||+|+.+|+ |+.++ |+|+|+|+|+|.+ +++ . + ..+.+++++.+. +.++
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~~eI-ivvdd~S~D~t~~---------~~~-~-~---~~~~~v~~i~~~~~~~~~ 64 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PNFLV-LVIDDASDDDTAG---------IVR-L-A---ITDSRVHLLRRHLPNART 64 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CCeEE-EEEECCCCcCHHH---------HHh-h-e---ecCCcEEEEeccCCcCCC
Confidence 68999999999999999999999 65443 3255668888777 554 1 1 123567777543 3456
Q ss_pred CChhHHHHHHHhhhc--------cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhh
Q 044519 173 YKAGALKEGLEKQYV--------KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMS 244 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~--------~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~ 244 (534)
||++|+|.|++.+.. .++|+|+++|+|+.++|++|+++...+ ++|+++++++.....|.+.++.+++|.++
T Consensus 65 Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~e 143 (191)
T cd06436 65 GKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF-SDPRVAGTQSRVRMYNRHKNLLTILQDLE 143 (191)
T ss_pred CHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh-cCCceEEEeeeEEEecCCCCHHHHHHHHH
Confidence 799999999998621 124899999999999999999988877 78999999999999998889999999888
Q ss_pred cccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC--Cccch
Q 044519 245 LDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR--TTVED 291 (534)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED 291 (534)
+...+...+..+...+. ..+.|++.++||++++++|||++. +++||
T Consensus 144 ~~~~~~~~~~~~~~~~~-~~~~G~~~~~r~~~l~~vgg~~~~~~~~~ED 191 (191)
T cd06436 144 FFIIIAATQSLRALTGT-VGLGGNGQFMRLSALDGLIGEEPWSDSLLED 191 (191)
T ss_pred HHHHHHHHHHHHHhcCc-EEECCeeEEEeHHHHHHhhcCCCCchhhcCC
Confidence 77666566665555443 457899999999999999776653 78888
|
N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase. |
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=190.02 Aligned_cols=192 Identities=18% Similarity=0.222 Sum_probs=142.6
Q ss_pred EEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 94 LVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
||+||+||+++.+++||+|+.+|++++.+++| |+|+|+|++.+ .+++...+ +.++.. .+++|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~eviv-vDd~s~d~~~~---------~~~~~~~~-------~~~~~~-~~~~g 62 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIV-IDGGSTDGTVD---------IIKKYEDK-------ITYWIS-EPDKG 62 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCceEEE-EeCCCCccHHH---------HHHHhHhh-------cEEEEe-cCCcC
Confidence 68999999999999999999999998754322 55557887766 65543221 233323 45567
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
++.|+|.|++.+ ++||++++|+|+.+.++++.+++..+.++++.+++.|.....+.+........ .....
T Consensus 63 ~~~a~n~~~~~a---~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~----~~~~~--- 132 (202)
T cd06433 63 IYDAMNKGIALA---TGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRR----PPPFL--- 132 (202)
T ss_pred HHHHHHHHHHHc---CCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCC----Ccchh---
Confidence 999999999999 99999999999999999999999777688999999998876554332211110 00000
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcccc
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
.........+.++++++||++++++|+|++. ..+||.+++.|+.++|+++.+.|++.++.
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~~~~ 193 (202)
T cd06433 133 --DKFLLYGMPICHQATFFRRSLFEKYGGFDESYRIAADYDLLLRLLLAGKIFKYLPEVLAAF 193 (202)
T ss_pred --hhHHhhcCcccCcceEEEHHHHHHhCCCchhhCchhhHHHHHHHHHcCCceEecchhhhhh
Confidence 0011111234677889999999999999875 45899999999999999999999887653
|
Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.5e-23 Score=195.89 Aligned_cols=202 Identities=21% Similarity=0.261 Sum_probs=139.3
Q ss_pred EEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
++||+|||+ +.+.+||+|+.+|. . +|+|+||++|++.. +..+ . ...+++++..+ .+.|
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q~---~--~iivvDn~s~~~~~--------~~~~-~------~~~~i~~i~~~-~n~G 59 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQV---D--KVVVVDNSSGNDIE--------LRLR-L------NSEKIELIHLG-ENLG 59 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhccC---C--EEEEEeCCCCccHH--------HHhh-c------cCCcEEEEECC-Ccee
Confidence 589999999 99999999999982 2 35567776666555 2221 1 23567777554 4555
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHH---HHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTI---PYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv---~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
+++|+|.|++.+...++||++++|+|+.++|++|.+++ ..+.++++++++++.....+.... ....+... ....
T Consensus 60 ~~~a~N~g~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~ 136 (237)
T cd02526 60 IAKALNIGIKAALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGEN-SPGVRKSG--YKLR 136 (237)
T ss_pred hHHhhhHHHHHHHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCee-ccceeccC--ccce
Confidence 99999999999822234999999999999999999994 555567788887776543332211 11111000 0000
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEeccCcccccCCcC
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDLGVKNELPST 320 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 320 (534)
................|+++++||++++++|||++... .||.|++.|+.++|+++.++|++.+++..+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~ 208 (237)
T cd02526 137 IQKEGEEGLKEVDFLITSGSLISLEALEKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHELGDK 208 (237)
T ss_pred ecccccCCceEeeeeeccceEEcHHHHHHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEecccCc
Confidence 00000111111122357889999999999999998653 68999999999999999999999998887765
|
Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen. |
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=188.73 Aligned_cols=142 Identities=32% Similarity=0.494 Sum_probs=125.1
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcch
Q 044519 192 FVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGV 271 (534)
Q Consensus 192 ~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 271 (534)
||+++|+|+.++||+++++++.+. +|+++++|++....+ .+++.++.|..++.......+...+..+....++|++++
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 78 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRN-RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGML 78 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecC-CCChhheeehhhhhhhhhhhHHHHHhcCCCccccCccee
Confidence 689999999999999999999995 899999999999864 468888888877654444434444455666668899999
Q ss_pred hhHHHHHHhCCCC-CCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhhhccch
Q 044519 272 WRIQAIEDAGGWK-DRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGP 335 (534)
Q Consensus 272 ~Rr~~l~~~Gg~~-~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 335 (534)
+|+++++++|||+ ....+||.|++.++.++||++.++|++.++++.|.|++++.+||+||.+|.
T Consensus 79 ~r~~~l~~vg~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 79 FRREALREVGGFDDPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred eeHHHHHHhCcccccccccchHHHHHHHHHCCCEEEEecccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999999999 788899999999999999999999999999999999999999999999997
|
|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=190.66 Aligned_cols=199 Identities=19% Similarity=0.109 Sum_probs=143.8
Q ss_pred EEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 94 LVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
||+||+|||++.+.+||+|+++|+||+.+++| |+|+|+|+|.+ ++++..+++ +..+.+. +.+.+.|
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiV-vddgS~d~t~~---------~~~~~~~~~---~~~~~~~-~~~~~~G 66 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELII-SDDGSTDGTVE---------IIKEYIDKD---PFIIILI-RNGKNLG 66 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEE-EeCCCCCCcHH---------HHHHHHhcC---CceEEEE-eCCCCcc
Confidence 68999999999999999999999999644333 55668888776 776665442 1234444 4556667
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
+++++|.|++.+ ++|||+++|+|+.++|++|.+++..+.++++.+++++.....+.+........... .......
T Consensus 67 ~~~~~n~g~~~~---~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 141 (214)
T cd04196 67 VARNFESLLQAA---DGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEY--QKIKPGT 141 (214)
T ss_pred HHHHHHHHHHhC---CCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccc--cccCCcc
Confidence 999999999998 99999999999999999999999996688899999998665544332211111000 0000000
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
. .........+.|+++++||++++++|++++. ...||.++..++.. |.++.++|++.+
T Consensus 142 ~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~ 200 (214)
T cd04196 142 S-FNNLLFQNVVTGCTMAFNRELLELALPFPDADVIMHDWWLALLASA-FGKVVFLDEPLI 200 (214)
T ss_pred C-HHHHHHhCccCCceeeEEHHHHHhhccccccccccchHHHHHHHHH-cCceEEcchhHH
Confidence 0 0001111234688999999999999999887 67899999988877 668999988765
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=187.95 Aligned_cols=177 Identities=20% Similarity=0.206 Sum_probs=141.8
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+|||++.+++||+|+++|++|..+++| |+|+|+|+|.+ .+++..+. .++++++.+ .+.|.
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiii-vD~~s~d~t~~---------~~~~~~~~-----~~i~~~~~~-~n~g~ 64 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIV-IDNASTDGTAE---------WLTSLGDL-----DNIVYLRLP-ENLGG 64 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEEE-EECCCCcchHH---------HHHHhcCC-----CceEEEECc-cccch
Confidence 6899999999999999999999999765433 66678888777 66554322 236676554 44458
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
+.++|.|++.+...++|+++++|+|++++|+++++++..+ ++++++++.+.....+.
T Consensus 65 ~~~~n~~~~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~---------------------- 121 (202)
T cd04185 65 AGGFYEGVRRAYELGYDWIWLMDDDAIPDPDALEKLLAYA-DKDNPQFLAPLVLDPDG---------------------- 121 (202)
T ss_pred hhHHHHHHHHHhccCCCEEEEeCCCCCcChHHHHHHHHHH-hcCCceEecceeEcCCC----------------------
Confidence 8899999987644579999999999999999999999999 48888888776433221
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCC--CccchHHHHHHHHhCCCEEEEeccCcccccCCcCHH
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR--TTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFK 322 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~ 322 (534)
+++++++||+.++++|++++. ..+||.+++.|+.++|+++ ++|++.+++..+.+..
T Consensus 122 -----------~~~~~~~~~~~~~~~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~~~ 179 (202)
T cd04185 122 -----------SFVGVLISRRVVEKIGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAINKG 179 (202)
T ss_pred -----------ceEEEEEeHHHHHHhCCCChhhhccchHHHHHHHHHHcCCcE-EecceEEEEccccccc
Confidence 245678999999999998874 3589999999999999999 9999999888876543
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-22 Score=190.51 Aligned_cols=209 Identities=19% Similarity=0.133 Sum_probs=145.0
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcC--CCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGL--SWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q--~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
...|+|||+||+|||++.+..+++++.++ ++++ ++|+ |+|+|+|+|.+ ++++..++++ ..++.+
T Consensus 6 ~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~--~eiivvDdgS~D~t~~---------i~~~~~~~~~--~~~v~~ 72 (243)
T PLN02726 6 EGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKD--FEIIVVDDGSPDGTQD---------VVKQLQKVYG--EDRILL 72 (243)
T ss_pred CCCceEEEEEccCCchhhHHHHHHHHHHHhccCCC--eEEEEEeCCCCCCHHH---------HHHHHHHhcC--CCcEEE
Confidence 34689999999999999999999998653 3333 4444 45568888877 7766555431 235556
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC-C--chhhHhH
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD-E--CLMTRLQ 241 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~--~~~~~~~ 241 (534)
+.+ +++.|+++|+|.|++.+ ++||++++|+|+.++|++|.++++.+ .+++.++|.|.....+.. . .+..+..
T Consensus 73 ~~~-~~n~G~~~a~n~g~~~a---~g~~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~r~~~~~~~~~~~~~r~~~ 147 (243)
T PLN02726 73 RPR-PGKLGLGTAYIHGLKHA---SGDFVVIMDADLSHHPKYLPSFIKKQ-RETGADIVTGTRYVKGGGVHGWDLRRKLT 147 (243)
T ss_pred Eec-CCCCCHHHHHHHHHHHc---CCCEEEEEcCCCCCCHHHHHHHHHHH-HhcCCcEEEEccccCCCCcCCccHHHHHH
Confidence 543 44556999999999998 99999999999999999999999998 556788888865433221 1 1211211
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC-CCccchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD-RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~-~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
...... ......+ .......|++.++||+++++++.+.+ ....+|.|++.++.++|+++..+|.....+...+
T Consensus 148 ~~~~~~--~~~~~~~---~~~~d~~g~~~~~rr~~~~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~ 221 (243)
T PLN02726 148 SRGANV--LAQTLLW---PGVSDLTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGE 221 (243)
T ss_pred HHHHHH--HHHHHhC---CCCCcCCCcccceeHHHHHHHHhhccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCCCCc
Confidence 100000 0000011 12233568889999999999976543 4567899999999999999999998776544333
|
|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=205.36 Aligned_cols=289 Identities=20% Similarity=0.341 Sum_probs=176.5
Q ss_pred ccEEEEEecCCCC----CChhHHHHHHHhhhc-cCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCc----EEEEeeeeEe
Q 044519 160 VNVKYETRKNRNG----YKAGALKEGLEKQYV-KDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKE----LGLVQARWKF 229 (534)
Q Consensus 160 ~~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~----v~~V~~~~~~ 229 (534)
+++.|+.|+++.+ .||||+|..++.+.. .+++||+.+|+|.. .+|+.+++.+..| -||+ ++.||.++++
T Consensus 166 P~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~-~d~~~g~~~~~vQfpq~f 244 (720)
T PF03552_consen 166 PMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFF-MDPKIGKKIAFVQFPQRF 244 (720)
T ss_pred CeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhh-ccCCCCCeeEEEeCCcee
Confidence 4567888887765 699999999986533 68999999999985 4999999999998 5665 9999999999
Q ss_pred ecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh-----------------------------
Q 044519 230 VNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA----------------------------- 280 (534)
Q Consensus 230 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~----------------------------- 280 (534)
.|-+.+-.-.-+ ....+..... +.+...-+.+.|+++++||+++-..
T Consensus 245 ~~i~~~d~y~~~---~~~~~~~~~~-g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~ 320 (720)
T PF03552_consen 245 DGIDKNDRYGNQ---NRVFFDINMR-GLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSK 320 (720)
T ss_pred CCCCcCCCCCcc---ceeeeecccc-ccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccc
Confidence 876443110000 1111222221 2222223334566666666555210
Q ss_pred -------------------------------------------------------------C------------------
Q 044519 281 -------------------------------------------------------------G------------------ 281 (534)
Q Consensus 281 -------------------------------------------------------------G------------------ 281 (534)
|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V 400 (720)
T PF03552_consen 321 KKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHV 400 (720)
T ss_pred ccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHH
Confidence 0
Q ss_pred ---------------CCCCCCccchHHHHHHHHhCCCEEEEecc--CcccccCCcCHHHHHHHHhhhccchhhHHhhhhh
Q 044519 282 ---------------GWKDRTTVEDMDLAVRASLKGWKFVFVGD--LGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTR 344 (534)
Q Consensus 282 ---------------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~ 344 (534)
||--.+++||...++++|.+|||.+|+.. ....+.+|.++.+...|++||+.|.+|++.....
T Consensus 401 ~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~ 480 (720)
T PF03552_consen 401 ASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHC 480 (720)
T ss_pred hcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCC
Confidence 11112368999999999999999999964 3467899999999999999999999999874445
Q ss_pred hhhhc--CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cccchh----HHHHHHHHHHHHHHH-Hh---
Q 044519 345 EIILC--ERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLV-PEIQLT----KPIAIYIPATITLLN-AV--- 413 (534)
Q Consensus 345 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~-~~~~~~----~~~~~~l~~~~~~~~-~~--- 413 (534)
.++.. +++++.+++.++...++. + ..+..+.|++ +|.+.++ +....| .|.++++++++++.. .+
T Consensus 481 Pl~~g~~~rL~~lQrLaY~~~~~yp---l-~Sipll~Y~~-lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~ 555 (720)
T PF03552_consen 481 PLWYGYGGRLKFLQRLAYLNYMLYP---L-TSIPLLCYCF-LPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEF 555 (720)
T ss_pred chhccCCCCCcHHHHHHHHHHhhhH---H-HHHHHHHHHH-hHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHH
Confidence 55554 688999998866433321 1 1122334433 4555444 322222 123333333322211 11
Q ss_pred -hcc---chhH-HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCceEEcccCCC
Q 044519 414 -CTP---RSFH-LIVFWILFENVMSLLRAKAAIIGLLEA--NRVNEWVVTEKHGN 461 (534)
Q Consensus 414 -~~~---~~~~-~~~~~~l~~~~~~~~~~~a~l~gl~~~--~~~~~~~~T~K~~~ 461 (534)
... +.+. --.+|.+.. .-....|++.++++. +++..|.+|+|..+
T Consensus 556 ~wsG~si~~WWrnQq~W~I~~---tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~d 607 (720)
T PF03552_consen 556 RWSGVSIREWWRNQQFWMIGG---TSAHLFAVLQGILKVLGGSETSFTVTSKVSD 607 (720)
T ss_pred HhccCcHHHhhcccceeeehh---hHHHHHHHHHHHHHHHcCCccceeecccccc
Confidence 001 1111 112332211 112234566666665 78999999999876
|
The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane |
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-22 Score=181.67 Aligned_cols=176 Identities=21% Similarity=0.216 Sum_probs=131.2
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+||+++.+++||+|+.+|++++.+++| |+|+|+|++.+ ++++..+.. +.++..+.+.+.+.++
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~t~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~ 67 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVII-ADDGSTEETKE---------LIEEFKSQF---PIPIKHVWQEDEGFRK 67 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEE-EeCCCchhHHH---------HHHHHHhhc---CCceEEEEcCCcchhH
Confidence 6899999999999999999999988766443 56668887766 665543321 2344444444444468
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
++++|.|++.+ ++||++++|+|+.++|++|+++++.+ ++++.+++++.. .+.+...
T Consensus 68 ~~~~n~g~~~a---~g~~i~~lD~D~~~~~~~l~~~~~~~--~~~~~v~g~~~~-~~~~~~~------------------ 123 (182)
T cd06420 68 AKIRNKAIAAA---KGDYLIFIDGDCIPHPDFIADHIELA--EPGVFLSGSRVL-LNEKLTE------------------ 123 (182)
T ss_pred HHHHHHHHHHh---cCCEEEEEcCCcccCHHHHHHHHHHh--CCCcEEecceee-cccccce------------------
Confidence 99999999999 99999999999999999999999987 566665555443 2222110
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe-ccCcccc
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV-GDLGVKN 315 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~-~~~~~~~ 315 (534)
..+.|++++++|+.+.++|||++... .||.|++.|+.++|++...+ +++.++|
T Consensus 124 --------~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h 180 (182)
T cd06420 124 --------RGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFH 180 (182)
T ss_pred --------eEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeee
Confidence 22357788899999999999998543 69999999999999555544 4666654
|
Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm |
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=185.33 Aligned_cols=203 Identities=17% Similarity=0.119 Sum_probs=140.1
Q ss_pred EEEeccCchHHHHHHHHHHHcCCC-CCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSW-PSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~y-p~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||+|||++.+.++|+|+.+|.+ ++.++ |+|+|+|+|++.+ +++++.++ ..+++++.. +.++|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~ei-iiVDd~S~d~t~~---------~~~~~~~~----~~~i~~~~~-~~n~G 65 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEI-IVVDDNSPDGTAE---------IVRELAKE----YPRVRLIVR-PGKRG 65 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEE-EEEeCCCCCChHH---------HHHHHHHh----CCceEEEec-CCCCC
Confidence 689999999999999999999998 44333 3255668888876 66554433 455666644 45666
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC-CchhhHhHhhhcccchhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD-ECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~~~~~~~~~~~~~~~~~~~ 252 (534)
+++|+|.|++.| ++|+++++|+|+.++|+++..+++.+ .+++.++|.|........ .++............. ..
T Consensus 66 ~~~a~n~g~~~a---~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 140 (224)
T cd06442 66 LGSAYIEGFKAA---RGDVIVVMDADLSHPPEYIPELLEAQ-LEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANL-LA 140 (224)
T ss_pred hHHHHHHHHHHc---CCCEEEEEECCCCCCHHHHHHHHHHH-hcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHHH-HH
Confidence 999999999999 99999999999999999999999997 455666676654433221 1110000000000000 00
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
+.. .........|++.++||++++++| ++......+|.|++.++.+.|+++.++|.....+..-.
T Consensus 141 ~~~--~~~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~ 206 (224)
T cd06442 141 RLL--LGRKVSDPTSGFRAYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGE 206 (224)
T ss_pred HHH--cCCCCCCCCCccchhhHHHHHHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCc
Confidence 000 112223356888899999999998 55555667889999999999999999998766544433
|
Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, |
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-22 Score=179.34 Aligned_cols=163 Identities=21% Similarity=0.330 Sum_probs=137.0
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+||+++.+.++++|+.+|++++.+++| ++|+|+|++.+ .+++. ..+++++..+ .+.|+
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iii-vdd~s~~~~~~---------~~~~~-------~~~~~~~~~~-~~~g~ 62 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIV-VDNASTDGSVE---------LLREL-------FPEVRLIRNG-ENLGF 62 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEE-EECCCCchHHH---------HHHHh-------CCCeEEEecC-CCcCh
Confidence 6899999999999999999999987655433 66667777666 44322 1256666443 45569
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
++|+|.|++.+ ++|+++++|+|+.++|+++.+++..+..+++++++++.
T Consensus 63 ~~a~n~~~~~~---~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------- 111 (166)
T cd04186 63 GAGNNQGIREA---KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK---------------------------- 111 (166)
T ss_pred HHHhhHHHhhC---CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc----------------------------
Confidence 99999999999 99999999999999999999999988788899888777
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCCC--ccchHHHHHHHHhCCCEEEEeccCccccc
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT--TVEDMDLAVRASLKGWKFVFVGDLGVKNE 316 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 316 (534)
..|+++++|+++++++|||++.. .+||.+++.|+.++|+++.+.|+..++++
T Consensus 112 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 112 ----------VSGAFLLVRREVFEEVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred ----------CceeeEeeeHHHHHHcCCCChhhhccccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 46899999999999999999854 57999999999999999999999987764
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-22 Score=179.31 Aligned_cols=180 Identities=32% Similarity=0.481 Sum_probs=131.5
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+||+++.+.+||+|+.+|.++..+++| |+|+|+|++.+ .+++...+. ...+.++ +..++.|+
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iiv-vdd~s~d~t~~---------~~~~~~~~~---~~~~~~~-~~~~~~g~ 66 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIV-VDDGSTDDTLE---------ILEELAALY---IRRVLVV-RDKENGGK 66 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEE-EeCCCccchHH---------HHHHHhccc---cceEEEE-EecccCCc
Confidence 6899999999999999999999997655433 55667777766 554433221 1334445 34456679
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
+.++|.|++.+ ++|+++++|+|+.++|+++++++..+.++++++++++.....+...++..................
T Consensus 67 ~~~~n~~~~~~---~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
T cd06423 67 AGALNAGLRHA---KGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRR 143 (180)
T ss_pred hHHHHHHHHhc---CCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeee
Confidence 99999999998 999999999999999999999977776889999999998776654344333332222211111111
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCCCccch
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVED 291 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED 291 (534)
..........++|+++++||++++++|||++..++||
T Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~~~~ggf~~~~~~eD 180 (180)
T cd06423 144 AQSALGGVLVLSGAFGAFRREALREVGGWDEDTLTED 180 (180)
T ss_pred hhheecceeecCchHHHHHHHHHHHhCCccccCcCCC
Confidence 1112333455789999999999999999999999998
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the |
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=196.20 Aligned_cols=202 Identities=17% Similarity=0.206 Sum_probs=140.0
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|++.+ ++++++++ ..++++++.
T Consensus 4 ~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIi-VdDgStD~t~~---------i~~~~~~~----~~~i~vi~~- 68 (328)
T PRK10073 4 STPKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIII-VNDGSTDNSVE---------IAKHYAEN----YPHVRLLHQ- 68 (328)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEE-EeCCCCccHHH---------HHHHHHhh----CCCEEEEEC-
Confidence 3589999999999999999999999999998766443 67779998877 77665543 467887743
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeee--EeecCCCch--h--hHhHh
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARW--KFVNADECL--M--TRLQE 242 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~--~~~n~~~~~--~--~~~~~ 242 (534)
.++|.+.|+|.|++.| +||||+++|+|+.++|++++++++.+. +++.+++.+.. ...+..... . .+...
T Consensus 69 -~n~G~~~arN~gl~~a---~g~yi~flD~DD~~~p~~l~~l~~~~~-~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (328)
T PRK10073 69 -ANAGVSVARNTGLAVA---TGKYVAFPDADDVVYPTMYETLMTMAL-EDDLDVAQCNADWCFRDTGETWQSIPSDRLRS 143 (328)
T ss_pred -CCCChHHHHHHHHHhC---CCCEEEEECCCCccChhHHHHHHHHHH-hCCCCEEEEccEEEEeCCCccccccccccccc
Confidence 4677999999999999 999999999999999999999999874 34444444332 222211100 0 00000
Q ss_pred hh-cccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 243 MS-LDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 243 ~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
.. +............ ........+.++||+.+++.| .|++....||.++..++..++.++.+++++..
T Consensus 144 ~~~~~~~~~l~~~l~~---~~~~~~~~~~l~Rr~~l~~~~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ly 213 (328)
T PRK10073 144 TGVLSGPDWLRMALSS---RRWTHVVWLGVYRRDFIVKNNIKFEPGLHHQDIPWTTEVMFNALRVRYTEQSLY 213 (328)
T ss_pred cceechHHHHHHHHhh---CCCCccHhHHHHHHHHHHHcCCccCCCCEeccHHHHHHHHHHCCEEEEECCCEE
Confidence 00 0000000000000 001112345799999999987 36666668999999999999999999998764
|
|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=184.41 Aligned_cols=200 Identities=13% Similarity=0.046 Sum_probs=135.4
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec---CC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK---NR 170 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~---~~ 170 (534)
|+||+||+++.+++||+|+.+|+||+. .+|+ |+|+|+|+|.+ +++++.++++ ..+++++... +.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~-~eiiVvDd~S~d~t~~---------i~~~~~~~~~--~~~~~~~~~~~~~~~ 68 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGT-LELSVFNDASTDKSAE---------IIEKWRKKLE--DSGVIVLVGSHNSPS 68 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCC-EEEEEEeCCCCccHHH---------HHHHHHHhCc--ccCeEEEEecccCCC
Confidence 689999999999999999999999842 3444 55568888877 7777665543 2345555332 23
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhhHhHhhhcccch
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMTRLQEMSLDYHF 249 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~~~ 249 (534)
+.|.+.|+|.|++.+ +|||++++|+|+.++|+++.+++..+.+++. +++++.......+.. ...+... ......
T Consensus 69 ~~G~~~a~N~g~~~a---~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~ 143 (219)
T cd06913 69 PKGVGYAKNQAIAQS---SGRYLCFLDSDDVMMPQRIRLQYEAALQHPN-SIIGCQVRRIPEDSTERYTRWIN-TLTREQ 143 (219)
T ss_pred CccHHHHHHHHHHhc---CCCEEEEECCCccCChhHHHHHHHHHHhCCC-cEEEEEEEecCcccchhhHHHHH-hcCHHH
Confidence 346899999999998 9999999999999999999999888866654 345444332222111 1111110 000000
Q ss_pred hhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC--ccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT--TVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
...+... ..+ ........++||++++++|||++.. ..||.++..|+.++|+++.++|++...
T Consensus 144 ~~~~~~~-~~~--~~~~~~~~~~rr~~~~~~g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~ 207 (219)
T cd06913 144 LLTQVYT-SHG--PTVIMPTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLL 207 (219)
T ss_pred HHHHHHh-hcC--CccccccceeehhHHhhcCCccchhccchhHHHHHHHHHHcCCceEEEcceeee
Confidence 0000000 000 1112334679999999999998753 469999999999999999999997754
|
This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified. |
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=184.64 Aligned_cols=184 Identities=18% Similarity=0.180 Sum_probs=130.6
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
|||+||+||+++.+.++|+|+++|++++.+++| |+|+|+|++.+ ++++ .++++.. .+.
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~eviv-vdd~s~d~~~~---------~~~~---------~~~~~~~---~~~ 58 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIV-VDGGSTDGTVA---------IARS---------AGVVVIS---SPK 58 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEE-EeCCCCccHHH---------HHhc---------CCeEEEe---CCc
Confidence 689999999999999999999999997655433 55567777766 4432 3455542 234
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
|++.++|.|++.+ ++|+++++|+|+.++|+++++++..+ .+++..++.......+.+ ...+..... ..
T Consensus 59 g~~~a~n~g~~~a---~~~~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~---- 126 (221)
T cd02522 59 GRARQMNAGAAAA---RGDWLLFLHADTRLPPDWDAAIIETL-RADGAVAGAFRLRFDDPG--PRLRLLELG--AN---- 126 (221)
T ss_pred CHHHHHHHHHHhc---cCCEEEEEcCCCCCChhHHHHHHHHh-hcCCcEEEEEEeeecCCc--cchhhhhhc--cc----
Confidence 5999999999998 89999999999999999999998777 444554444443333322 111111100 00
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
... ......+.++++++||++++++|||++....||.|++.|+.+.|+++.+ |...+.
T Consensus 127 --~~~-~~~~~~~~~~~~~~r~~~~~~~G~fd~~~~~ED~d~~~r~~~~G~~~~~-~~~~~~ 184 (221)
T cd02522 127 --LRS-RLFGLPYGDQGLFIRRELFEELGGFPELPLMEDVELVRRLRRRGRPALL-PSPVTT 184 (221)
T ss_pred --cee-cccCCCcCCceEEEEHHHHHHhCCCCccccccHHHHHHHHHhCCCEEEc-Cceeee
Confidence 000 0111123466899999999999999998899999999999999999877 555443
|
Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=184.36 Aligned_cols=226 Identities=11% Similarity=0.069 Sum_probs=144.3
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+.+||+|+++|+||+.+++| |+|+|+| .+ .+++..+++ .+.+++++..
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIV-VDDgS~~--~~---------~~~~~~~~~--~~~ri~~i~~- 67 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMII-VDDCSTS--WE---------QLQQYVTAL--NDPRITYIHN- 67 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCC--HH---------HHHHHHHHc--CCCCEEEEEC-
Confidence 4689999999999999999999999999999755433 5555664 22 444444432 2457888744
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc--c
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL--D 246 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~--~ 246 (534)
+.++|.+.|+|.|++.| +||||+++|+|+.++|+.|+.++..+.+.++.+.+.+....... ... ........ .
T Consensus 68 ~~n~G~~~a~N~gi~~a---~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~p~ 142 (279)
T PRK10018 68 DINSGACAVRNQAIMLA---QGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQG-EVY-SQPASLPLYPK 142 (279)
T ss_pred CCCCCHHHHHHHHHHHc---CCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecC-ccc-ccccccCCCCC
Confidence 45667999999999999 99999999999999999999999988655666666554322211 100 00000000 0
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcc-cccCCcCHHHH
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGV-KNELPSTFKAY 324 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~-~~~~p~t~~~~ 324 (534)
..+..... ...++.|+..+.++..+.+ ++|+++ ...||+|+..|+..+|++...+|++.. ++..+.+.+..
T Consensus 143 ~~~~~~~~------~~~n~ig~~~~~~~~~~~~-~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~s~~~~ 215 (279)
T PRK10018 143 SPYSRRLF------YKRNIIGNQVFTWAWRFKE-CLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQIT 215 (279)
T ss_pred CCCCHHHH------HHhcCcCceeeehhhhhhh-cccCCCCCccccHHHHHHHHHhcCceEeeccceEEEEcCCCCcccc
Confidence 00000000 0112345556666666654 578664 458999999999999999999998743 33345444211
Q ss_pred HHHHhhhccchhhHHhhhh
Q 044519 325 RYQQHRWSCGPSNLFSKMT 343 (534)
Q Consensus 325 ~~Qr~RW~~G~~~~~~~~~ 343 (534)
.+..+ .++.++.++++.
T Consensus 216 ~s~~k--~~~~~~~~rk~~ 232 (279)
T PRK10018 216 SSPKK--FSGYFHFYRKHK 232 (279)
T ss_pred CCHHH--HHHHHHHHHHhh
Confidence 11111 244446666653
|
|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-20 Score=186.26 Aligned_cols=213 Identities=22% Similarity=0.282 Sum_probs=154.7
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
.|.++++|++||..+.+.+|++++.+|+|+.+.++ .|+++|+|++.+ .+++.. ..+++++..+
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv-~vDn~s~d~~~~---------~~~~~~------~~~v~~i~~~- 64 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDDVIV-VVDNGSTDGSLE---------ALKARF------FPNVRLIENG- 64 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEE-EccCCCCCCCHH---------HHHhhc------CCcEEEEEcC-
Confidence 47899999999999999999999999999976543 355568888877 443210 4678888554
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh-hh-ccc
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE-MS-LDY 247 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~-~~-~~~ 247 (534)
.|.|-+++.|.|++.|.....+|++++|.|++++|++|.++++.+++++..+++++.....+... ....... .. ...
T Consensus 65 ~NlG~agg~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~ 143 (305)
T COG1216 65 ENLGFAGGFNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESL-YIDRRGGESDGLTG 143 (305)
T ss_pred CCccchhhhhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCc-chheeccccccccc
Confidence 55568999999999984333349999999999999999999999988888888888776543221 1111100 00 000
Q ss_pred -chhhhh---hc-ccccCccc-cccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 248 -HFSVEQ---EV-GSSTCQFF-GFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 248 -~~~~~~---~~-~~~~~~~~-~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
...... .. ........ .++|+++++|+++++++|+++++.. .||.|++.|+.+.|+++.++|++.++|..-.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~ 223 (305)
T COG1216 144 GWRASPLLEIAPDLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAIIYHKIGS 223 (305)
T ss_pred cceecccccccccccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceeehHHHHHHHHHHcCCeEEEeeccEEEEeccC
Confidence 000000 00 00001111 2689999999999999999998554 8999999999999999999999999986655
Q ss_pred C
Q 044519 320 T 320 (534)
Q Consensus 320 t 320 (534)
+
T Consensus 224 s 224 (305)
T COG1216 224 S 224 (305)
T ss_pred C
Confidence 4
|
|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=175.18 Aligned_cols=189 Identities=12% Similarity=0.044 Sum_probs=127.4
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcC---CCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGL---SWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q---~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
|.|||+||+||+++.+++||+|+.+| .+++ ++|+ |+|+|+|+|.+ ++++..+ ..+++++.
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~--~EiIVvDdgStD~t~~---------i~~~~~~-----~~~i~~i~ 64 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGIS--FEWIVVDGGSNDGTRE---------FLENLNG-----IFNLRFVS 64 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCC--EEEEEEECcCcccHHH---------HHHHhcc-----cCCEEEEE
Confidence 68999999999999999999999753 3454 3444 45558998877 6655422 13577774
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
.+ +.|+++|+|.|++.| +||||+++|+|+..+|+.++.+.... .++...++.|.......+.....+...
T Consensus 65 -~~-~~G~~~A~N~Gi~~a---~g~~v~~ld~DD~~~~~~~~~~~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~---- 134 (248)
T PRK10063 65 -EP-DNGIYDAMNKGIAMA---QGRFALFLNSGDIFHQDAANFVRQLK-MQKDNAMIIGDALLDFGDGHKIKRSAK---- 134 (248)
T ss_pred -CC-CCCHHHHHHHHHHHc---CCCEEEEEeCCcccCcCHHHHHHHHH-hCCCCeEEEeeeEEEcCCCcEEEEccC----
Confidence 33 446999999999999 99999999999999998765443333 343344444443322211111111000
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
.. . .......+++.+.++|++.++. |+|++. ...||.|+..|+..+|+++.++|...+.
T Consensus 135 --~~--~----~~~~~~~~~~~~~~~~~~~~~~-~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~ 194 (248)
T PRK10063 135 --PG--W----YIYHSLPASHQAIFFPVSGLKK-WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVSE 194 (248)
T ss_pred --Ch--h----HHhcCCCCCCcEEEEEHHHHhc-CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeEE
Confidence 00 0 0000112356778899998875 678764 4579999999999999999999988874
|
|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=170.72 Aligned_cols=200 Identities=19% Similarity=0.128 Sum_probs=133.8
Q ss_pred EEEeccCchHHHHHHHHHHHcCCC----CCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSW----PSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~y----p~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|+||+|||++.+.++|+++.+|.+ ++.+++ +|+|+|+|+|.+ +++++.+++ +..++++..+ .
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eii-vvdd~S~D~t~~---------~~~~~~~~~---~~~i~~i~~~-~ 66 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEII-VVDDGSKDGTAE---------VARKLARKN---PALIRVLTLP-K 66 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEE-EEeCCCCCchHH---------HHHHHHHhC---CCcEEEEEcc-c
Confidence 689999999999999999998755 443432 255668888877 776665543 2224666444 4
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----CchhhHhHhhhcc
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD----ECLMTRLQEMSLD 246 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~~~~~~~~~~~~ 246 (534)
+.|+++|+|.|++.| ++|||+++|+|..++|+++.+++..+. +++.++|.|.......+ .++.........
T Consensus 67 n~G~~~a~~~g~~~a---~gd~i~~ld~D~~~~~~~l~~l~~~~~-~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~- 141 (211)
T cd04188 67 NRGKGGAVRAGMLAA---RGDYILFADADLATPFEELEKLEEALK-TSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGF- 141 (211)
T ss_pred CCCcHHHHHHHHHHh---cCCEEEEEeCCCCCCHHHHHHHHHHHh-ccCCcEEEEEeeccCCcccccccHHHHHHHHHH-
Confidence 455999999999999 999999999999999999999999973 44556666654433221 122222211110
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCC-CCCccchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWK-DRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~-~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
........+.. ......+..++||++++++++.. .....+|.|+..++.+.|+++.++|- .+.+.|.
T Consensus 142 -~~~~~~~~~~~---~~d~~~g~~~~~r~~~~~~~~~~~~~~~~~d~el~~r~~~~g~~~~~vpi--~~~~~~~ 209 (211)
T cd04188 142 -NFLVRLLLGLG---IKDTQCGFKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVPV--RWVEIPG 209 (211)
T ss_pred -HHHHHHHcCCC---CcccccCceeEcHHHHHHHHhhhhccceEeeHHHHHHHHHcCCeEEEcCc--ceecCCC
Confidence 01000001111 11112345799999999986543 34568899999999999999999983 4555553
|
UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. |
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-20 Score=167.87 Aligned_cols=154 Identities=25% Similarity=0.360 Sum_probs=128.7
Q ss_pred CCCChhHHHHHHHh-hhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccch
Q 044519 171 NGYKAGALKEGLEK-QYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHF 249 (534)
Q Consensus 171 ~g~Ka~aln~gl~~-a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 249 (534)
..+|.+|+..++++ + ++|++++.|+|..++||+|.+++.++ ++|++++|++.....+.+ ++..++.......+.
T Consensus 15 ~N~Kv~nL~~~~~~~a---~~d~~~~~DsDi~v~p~~L~~lv~~l-~~p~vglVt~~~~~~~~~-~~~~~l~~~~~~~~~ 89 (175)
T PF13506_consen 15 CNPKVNNLAQGLEAGA---KYDYLVISDSDIRVPPDYLRELVAPL-ADPGVGLVTGLPRGVPAR-GFWSRLEAAFFNFLP 89 (175)
T ss_pred CChHHHHHHHHHHhhC---CCCEEEEECCCeeECHHHHHHHHHHH-hCCCCcEEEecccccCCc-CHHHHHHHHHHhHHH
Confidence 34699999999998 8 99999999999999999999999999 789999999988766654 666666543333222
Q ss_pred hhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCC----cCHHH
Q 044519 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELP----STFKA 323 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p----~t~~~ 323 (534)
...+. .....+..|.++++||++++++||++. +.++||+.++.+++++|+++...|.+.+.+..| .++++
T Consensus 90 ~~~~a----~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~~v~~~~~~~~~~~s~~~ 165 (175)
T PF13506_consen 90 GVLQA----LGGAPFAWGGSMAFRREALEEIGGFEALADYLADDYALGRRLRARGYRVVLSPYPVVQTSVPRTLEDSFRD 165 (175)
T ss_pred HHHHH----hcCCCceecceeeeEHHHHHHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcchheeecccCccccccHHH
Confidence 22222 234555789999999999999999987 788999999999999999999999988877777 48999
Q ss_pred HHHHHhhhcc
Q 044519 324 YRYQQHRWSC 333 (534)
Q Consensus 324 ~~~Qr~RW~~ 333 (534)
+++|+.||++
T Consensus 166 ~~~r~~RW~r 175 (175)
T PF13506_consen 166 FFRRQLRWAR 175 (175)
T ss_pred HHHHHHhhcC
Confidence 9999999985
|
|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=173.89 Aligned_cols=207 Identities=16% Similarity=0.155 Sum_probs=137.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcC------CCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCc
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGL------SWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGV 160 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q------~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (534)
+..|.+||+||+|||++.++++++++.++ +.+....+|+ |+|+|+|+|.+ ++++++++....+.
T Consensus 67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~---------i~~~~~~~~~~~~~ 137 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLK---------VAKDFWRQNINPNI 137 (333)
T ss_pred CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHH---------HHHHHHHhcCCCCC
Confidence 45788999999999999999999998653 1233234444 55669999888 77666554311234
Q ss_pred cEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc--CCcEEEEeeeeEeecCC-----
Q 044519 161 NVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE--NKELGLVQARWKFVNAD----- 233 (534)
Q Consensus 161 ~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~--~~~v~~V~~~~~~~n~~----- 233 (534)
+++++..+ ++.||++|+|.|++++ +||+++++|+|...+|+.+.++++.+.+ ++++++|.|.......+
T Consensus 138 ~i~vi~~~-~N~G~~~A~~~Gi~~a---~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~ 213 (333)
T PTZ00260 138 DIRLLSLL-RNKGKGGAVRIGMLAS---RGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAK 213 (333)
T ss_pred cEEEEEcC-CCCChHHHHHHHHHHc---cCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCccccc
Confidence 57777444 5556999999999998 9999999999999999999999998843 57788888876543221
Q ss_pred CchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 234 ECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
.++..+.... ..++......+.. ........-++||++++++= ....+...-|.|+..++.+.|+++..+|-..
T Consensus 214 ~~~~r~~~~~--~~~~l~~~~~~~~---i~D~~~Gfk~~~r~~~~~i~~~~~~~~~~fd~Ell~~a~~~g~~I~EvPv~~ 288 (333)
T PTZ00260 214 RKWYRNILMY--GFHFIVNTICGTN---LKDTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNW 288 (333)
T ss_pred CcHHHHHHHH--HHHHHHHHHcCCC---cccCCCCeEEEeHHHHHHHhhhccccCccchHHHHHHHHHcCCCEEEEceee
Confidence 1222222111 1111111111111 11122345689999998761 1111233568999999999999999998753
|
|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-19 Score=174.16 Aligned_cols=197 Identities=14% Similarity=0.131 Sum_probs=132.5
Q ss_pred ccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChh-hhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 99 MYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNE-VLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 99 ~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~-t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
+||++ +.+++||+|+.+|.+ + |+|+|| |+|+ +.+ +.. +...++++++.+ .+.|.+
T Consensus 2 tyn~~~~~l~~~l~sl~~q~~---~--iiVVDN~S~~~~~~~--------~~~--------~~~~~i~~i~~~-~N~G~a 59 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQVD---R--IIAVDNSPHSDQPLK--------NAR--------LRGQKIALIHLG-DNQGIA 59 (281)
T ss_pred ccCccHHHHHHHHHHHHhcCC---E--EEEEECcCCCcHhHH--------HHh--------ccCCCeEEEECC-CCcchH
Confidence 79975 899999999999862 3 445555 5443 333 121 123578888544 455699
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCC-cEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh-
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENK-ELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ- 253 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~-~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~- 253 (534)
+|+|.|++.|...++|||+++|+|+.+++++++++++.+.+++ +++++++.....+. ........... .......
T Consensus 60 ~a~N~Gi~~a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 136 (281)
T TIGR01556 60 GAQNQGLDASFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGT-SRRLPAIHLDG--LLLRQISL 136 (281)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCC-cccCCceeecc--cceeeecc
Confidence 9999999998656799999999999999999999999986555 77887765422111 11100000000 0000000
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEeccCcccccCCcC
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDLGVKNELPST 320 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 320 (534)
.............++++++||++++++|+|+++.. .||.|+++|+.++|+++.++|++.++|....+
T Consensus 137 ~~~~~~~~~~~~~~sg~li~~~~~~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~~ 205 (281)
T TIGR01556 137 DGLTTPQKTSFLISSGCLITREVYQRLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRIGDS 205 (281)
T ss_pred cccCCceeccEEEcCcceeeHHHHHHhCCccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEEecCCc
Confidence 00000111112245667899999999999998643 68999999999999999999999998876654
|
Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids. |
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=163.12 Aligned_cols=169 Identities=21% Similarity=0.251 Sum_probs=112.1
Q ss_pred EEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 94 LVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
||+||+||+++.+.++|+|+.+|.++..+++| |+|+|+|++.+ ++++..+ .+.++++++.+++. |
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~~~~---------~~~~~~~----~~~~i~~i~~~~n~-g 65 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIV-VDDGSTDETEE---------ILEEYAE----SDPNIRYIRNPENL-G 65 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEE-EECS-SSSHHH---------HHHHHHC----CSTTEEEEEHCCCS-H
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEE-ecccccccccc---------ccccccc----cccccccccccccc-c
Confidence 79999999999999999999999766655432 55557677665 6655443 46789999776554 6
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
+++++|.|++++ ++||++++|+|+.++|++|+++++.+.+++. +++.+.......+....................
T Consensus 66 ~~~~~n~~~~~a---~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (169)
T PF00535_consen 66 FSAARNRGIKHA---KGEYILFLDDDDIISPDWLEELVEALEKNPP-DVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKI 141 (169)
T ss_dssp HHHHHHHHHHH-----SSEEEEEETTEEE-TTHHHHHHHHHHHCTT-EEEEEEEEEEECTTETEECCCTSEEEECCHCHH
T ss_pred cccccccccccc---ceeEEEEeCCCceEcHHHHHHHHHHHHhCCC-cEEEEEEEEecCCccccccccchhhhhhhhhHH
Confidence 999999999999 9999999999999999999999999965444 444444444433322211111100001111111
Q ss_pred hcccccCccccccCCcchhhHHHHHHhC
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAG 281 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~G 281 (534)
...........+.|++.++||++++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 142 FNNIRFWKISFFIGSCALFRRSVFEEIG 169 (169)
T ss_dssp HHTTHSTTSSEESSSCEEEEEHHHHHCH
T ss_pred HHhhhcCCcccccccEEEEEHHHHHhhC
Confidence 1233344455568999999999999985
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A .... |
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=158.97 Aligned_cols=179 Identities=19% Similarity=0.139 Sum_probs=121.2
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||+||+++.+.+||+|+.+|.++....+|+|+|| |+|++.+ .+++..++ ...++++..+ .+.|
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~---------~~~~~~~~----~~~~~~~~~~-~n~G 66 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAE---------IARELAAR----VPRVRVIRLS-RNFG 66 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHH---------HHHHHHHh----CCCeEEEEcc-CCCC
Confidence 689999999999999999999988433455556665 6666655 66555443 3445566444 4445
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC--CchhhHhHhhhcccchhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD--ECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~--~~~~~~~~~~~~~~~~~~ 251 (534)
+++|+|.|++.+ ++|+++++|+|+.++|++|++++..+ .+++.++|.|.....+.. .....+....... ...
T Consensus 67 ~~~a~n~g~~~a---~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~ 140 (185)
T cd04179 67 KGAAVRAGFKAA---RGDIVVTMDADLQHPPEDIPKLLEKL-LEGGADVVIGSRFVRGGGAGMPLLRRLGSRLFN--FLI 140 (185)
T ss_pred ccHHHHHHHHHh---cCCEEEEEeCCCCCCHHHHHHHHHHH-hccCCcEEEEEeecCCCcccchHHHHHHHHHHH--HHH
Confidence 999999999999 99999999999999999999999986 345677777776554432 2222222111000 011
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhC--CCCCCCccchHHHHHH
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAG--GWKDRTTVEDMDLAVR 297 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G--g~~~~~~~ED~~l~~r 297 (534)
... .........|+++++||++++++| +++ ....+|.|+..|
T Consensus 141 ~~~---~~~~~~~~~~~~~~~~r~~~~~i~~~~~~-~~~~~~~~~~~~ 184 (185)
T cd04179 141 RLL---LGVRISDTQSGFRLFRREVLEALLSLLES-NGFEFGLELLVG 184 (185)
T ss_pred HHH---cCCCCcCCCCceeeeHHHHHHHHHhhccc-cCcceeeEeeec
Confidence 110 112223346888999999999994 444 456777776655
|
DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex |
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.7e-18 Score=165.34 Aligned_cols=205 Identities=18% Similarity=0.249 Sum_probs=132.6
Q ss_pred EEEEeccCchH------HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 94 LVQIPMYNEKE------VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 94 sViIP~yne~~------~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
|||||++++.. .+..||.++..+.-+ .+++|+|+|++++++.. +.+++.+++ .....++..
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~-~~~eiIvvd~~s~~~~~--------~~l~~~~~~----~~~~~~i~~ 67 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSD-PDFEIIVVDDGSSDEFD--------EELKKLCEK----NGFIRYIRH 67 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCchhHH--------HHHHHHHhc----cCceEEEEc
Confidence 79999999983 455557777664333 34566677765554443 244444443 223335543
Q ss_pred cCCC--CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHH---HHhcCCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 168 KNRN--GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIP---YLLENKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 168 ~~~~--g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~---~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
+..+ -+++.|+|.|++.| ++|+|+++|+|++++|+++.+++. .+.++++. .+..+..+.+.+.+. ....
T Consensus 68 ~~~~~~f~~a~arN~g~~~A---~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~-~~~~p~~yl~~~~~~--~~~~ 141 (281)
T PF10111_consen 68 EDNGEPFSRAKARNIGAKYA---RGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNA-FLVYPCLYLSEEGSE--KFYS 141 (281)
T ss_pred CCCCCCcCHHHHHHHHHHHc---CCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCc-eEEEeeeeccchhhH--HHhh
Confidence 3222 26999999999999 999999999999999999999999 66444433 333344444433221 1110
Q ss_pred hh-cccchhhh-hh--cccccCccccccCCcchhhHHHHHHhCCCCCCC---ccchHHHHHHHHhCCCEEEEeccCcccc
Q 044519 243 MS-LDYHFSVE-QE--VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT---TVEDMDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 243 ~~-~~~~~~~~-~~--~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
.. ........ .. ..+.........|++++++|+.+.++||||++. -.||.|++.|+.+.|.++...++..+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~ 221 (281)
T PF10111_consen 142 QFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYH 221 (281)
T ss_pred cchhcchHHHHHHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhccc
Confidence 00 00000101 01 111222233356799999999999999999865 3799999999999999999999988865
Q ss_pred cC
Q 044519 316 EL 317 (534)
Q Consensus 316 ~~ 317 (534)
..
T Consensus 222 ~~ 223 (281)
T PF10111_consen 222 SH 223 (281)
T ss_pred cc
Confidence 33
|
|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=175.51 Aligned_cols=147 Identities=19% Similarity=0.283 Sum_probs=130.7
Q ss_pred cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccC
Q 044519 188 KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNG 267 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 267 (534)
.+-++|+++|+|+.++|+++.++++.|..||++|+++| +..|..++|+...|.+++..++..+....+..+...+.+|
T Consensus 439 ~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish~l~Ka~ESvFG~VsclPG 516 (862)
T KOG2571|consen 439 PSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACG--RILNKGGSWVVAYQNFEYAISHNLQKATESVFGCVSCLPG 516 (862)
T ss_pred CcceEEEEecCCCccCcHHHHHHHHHhccCcccceecc--ccccCCCceEEeHHHHHHHHHHHHHHhhhhhceeEEecCc
Confidence 45678999999999999999999999988999999999 4567778999999999999999988888999999999999
Q ss_pred CcchhhHHHHHHhC----------C---CCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhhhccc
Q 044519 268 TAGVWRIQAIEDAG----------G---WKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCG 334 (534)
Q Consensus 268 ~~~~~Rr~~l~~~G----------g---~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 334 (534)
+.+++|-+++.+-- + ......+||..|+.++.++||++.|++++.+.++.|+++.++..||+||..|
T Consensus 517 cfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a~s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 517 CFSLYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVAASDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred hhHHHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeeeccccccccCcHhHHHHHHHhhhhccc
Confidence 99999998876531 0 0112379999999999999999999999999999999999999999999999
Q ss_pred hh
Q 044519 335 PS 336 (534)
Q Consensus 335 ~~ 336 (534)
.+
T Consensus 597 ~f 598 (862)
T KOG2571|consen 597 IF 598 (862)
T ss_pred ch
Confidence 44
|
|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=162.80 Aligned_cols=198 Identities=19% Similarity=0.123 Sum_probs=127.6
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCC-C-CCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSW-P-SDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~y-p-~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
...|+|||+||+|||++.|.++|+++.+|.+ + .+++ |+|+|+|+|+|.+ ++++...+.. .....+
T Consensus 28 ~~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EI-IVVDDgStD~T~~---------ia~~~~~~v~---~~~~~~ 94 (306)
T PRK13915 28 KAGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDEL-IVIDSGSTDATAE---------RAAAAGARVV---SREEIL 94 (306)
T ss_pred cCCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEE-EEEeCCCccHHHH---------HHHHhcchhh---cchhhh
Confidence 4678999999999999999999999998765 2 2333 3356679998887 5544322110 011111
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeec--------CCCch
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVN--------ADECL 236 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n--------~~~~~ 236 (534)
.....+.||+.|+|.|++.+ ++|+++++|+|+. ++|+++.+++..+.+++++++|.|.....- .....
T Consensus 95 ~~~~~n~Gkg~A~~~g~~~a---~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr 171 (306)
T PRK13915 95 PELPPRPGKGEALWRSLAAT---TGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGR 171 (306)
T ss_pred hccccCCCHHHHHHHHHHhc---CCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCc
Confidence 12245567999999999998 9999999999997 899999999999966899999988532110 00111
Q ss_pred hhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHh-CCC-EEEEec
Q 044519 237 MTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASL-KGW-KFVFVG 309 (534)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~-~G~-ki~~~~ 309 (534)
.++.... ..+... ...........++..++||++++++. ++. ..+.|.++...+.+ .|. ++..++
T Consensus 172 ~~~~~~~---~l~~~~---~~~l~~i~dp~sG~~a~rr~~l~~l~-~~~-~yg~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 172 VTELVAR---PLLNLL---RPELAGFVQPLGGEYAGRRELLESLP-FVP-GYGVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred hHHHHHH---HHHHHH---HHhhhcccCcchHhHHHHHHHHHhCC-CCC-CCeehHHHHHHHHHHhCcCceEEEE
Confidence 1111000 000000 00011111223445789999999984 553 35668888888774 576 666665
|
|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-17 Score=156.71 Aligned_cols=229 Identities=16% Similarity=0.204 Sum_probs=179.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
..+|.|||+.|..+-++++-..+||....+|++.|+. +++++++|+.++ ++++..++|+. ...++...
T Consensus 82 ~~LPgVSiikPl~G~d~nl~~Nlesffts~Y~~~ElL-fcv~s~eDpAi~---------vv~~Ll~kyp~--VdAklf~g 149 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVDPNLYHNLESFFTSQYHKYELL-FCVESSEDPAIE---------VVERLLKKYPN--VDAKLFFG 149 (431)
T ss_pred CCCCCceEEeecccCCchhHHhHHHHHhhccCceEEE-EEEccCCCcHHH---------HHHHHHhhCCC--cceEEEEc
Confidence 3689999999999999999999999999999977654 488999999988 99999998863 34444433
Q ss_pred cCCCC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc
Q 044519 168 KNRNG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245 (534)
Q Consensus 168 ~~~~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~ 245 (534)
.+..| .|..|+.-|.+.| ++|+|++.|+|....||.+..++..|...++.+.|++.....++++ +-.......+
T Consensus 150 G~~vg~npKInN~mpgy~~a---~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~dr~G-f~atle~~~f 225 (431)
T KOG2547|consen 150 GEKVGLNPKINNMMPGYRAA---KYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKDRQG-FDATLEQVYF 225 (431)
T ss_pred ccccccChhhhccCHHHHHh---cCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeecccc-chhhhhheee
Confidence 33333 5999999999999 9999999999999999999999999987889999988877766654 2222221111
Q ss_pred ccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHH
Q 044519 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKA 323 (534)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~ 323 (534)
........ ......++.+..|-..+.||+++++.||... ..+.||...+..+..+|||..+...+.-.+..-.+...
T Consensus 226 gTsh~r~y-l~~n~~~~~c~tgms~~mrK~~ld~~ggi~~f~~yLaedyFaaksllSRG~ksaist~palQnSas~~mss 304 (431)
T KOG2547|consen 226 GTSHPRIY-LSGNVLGFNCSTGMSSMMRKEALDECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTHPALQNSASVTMSS 304 (431)
T ss_pred ccCCceEE-EccccccccccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhhHHHH
Confidence 11111111 1223444566789999999999999999876 45799999999999999999998877777777788889
Q ss_pred HHHHHhhhcc
Q 044519 324 YRYQQHRWSC 333 (534)
Q Consensus 324 ~~~Qr~RW~~ 333 (534)
+.+|-.||.+
T Consensus 305 f~~Ri~rwvk 314 (431)
T KOG2547|consen 305 FLDRIIRWVK 314 (431)
T ss_pred HHHHHHHhhh
Confidence 9999999865
|
|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.8e-17 Score=149.49 Aligned_cols=174 Identities=18% Similarity=0.146 Sum_probs=117.7
Q ss_pred EEEeccCchHHHHHHHHHHHcCC---CCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLS---WPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~---yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
|+||+|||++.+.++++++.++. ++..+++ +|+|+|+|++.+ ++++..++ ..+++++... ++
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eii-vvdd~s~d~t~~---------~~~~~~~~----~~~i~~i~~~-~n 65 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEII-FVDDGSTDRTLE---------ILRELAAR----DPRVKVIRLS-RN 65 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEE-EEeCCCCccHHH---------HHHHHHhh----CCCEEEEEec-CC
Confidence 68999999999999998886543 4544433 255668888776 66554433 4567777554 45
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 251 (534)
.|+++|+|.|++++ ++|+++++|+|+.++|++|.++++.+ +++.++|.|.....+ .+...+...........
T Consensus 66 ~G~~~a~n~g~~~a---~~d~i~~~D~D~~~~~~~l~~l~~~~--~~~~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~- 137 (181)
T cd04187 66 FGQQAALLAGLDHA---RGDAVITMDADLQDPPELIPEMLAKW--EEGYDVVYGVRKNRK--ESWLKRLTSKLFYRLIN- 137 (181)
T ss_pred CCcHHHHHHHHHhc---CCCEEEEEeCCCCCCHHHHHHHHHHH--hCCCcEEEEEecCCc--chHHHHHHHHHHHHHHH-
Confidence 56999999999999 99999999999999999999999986 334566666654433 33333322111000000
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHH
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLA 295 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~ 295 (534)
.. .........|++.++||++++++|+|++.. ..+|.+..
T Consensus 138 -~~---~~~~~~~~~~~~~~~~r~~~~~i~~~d~~~~~~~~~~~~ 178 (181)
T cd04187 138 -KL---SGVDIPDNGGDFRLMDRKVVDALLLLPERHRFLRGLIAW 178 (181)
T ss_pred -HH---cCCCCCCCCCCEEEEcHHHHHHHHhcCCCCccHHHHHHH
Confidence 00 112222346788899999999999999854 35565543
|
A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. |
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-15 Score=150.93 Aligned_cols=193 Identities=15% Similarity=0.149 Sum_probs=123.9
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHc---CCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACG---LSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~---q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.+++||+||+|||++.+.++++++.+ |..++.++ |+|+|+|+|+|.+ ++++..++ .+.+++.+.
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EI-IvVDDgS~D~T~~---------il~~~~~~---~~~~v~~i~ 71 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEI-LLIDDGSSDNSAE---------MLVEAAQA---PDSHIVAIL 71 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEE-EEEeCCCCCcHHH---------HHHHHHhh---cCCcEEEEE
Confidence 46799999999999999999988743 44333333 3356669998887 66554332 245565553
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
. +++.||++|+|.|+++| ++|+++++|||...+|+.+.++++.+.+ +.++|.+... +...++..+.-...+.
T Consensus 72 ~-~~n~G~~~A~~~G~~~A---~gd~vv~~DaD~q~~p~~i~~l~~~~~~--~~DvV~~~r~--~~~~~~~r~~~s~~~~ 143 (325)
T PRK10714 72 L-NRNYGQHSAIMAGFSHV---TGDLIITLDADLQNPPEEIPRLVAKADE--GYDVVGTVRQ--NRQDSWFRKTASKMIN 143 (325)
T ss_pred e-CCCCCHHHHHHHHHHhC---CCCEEEEECCCCCCCHHHHHHHHHHHHh--hCCEEEEEEc--CCCCcHHHHHHHHHHH
Confidence 3 45667999999999999 9999999999999999999999999843 3556766542 3233444433211111
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
. ......+... ....+..-++||++++++-...+. +..+...+...|+++..+|-..
T Consensus 144 ~--l~~~~~g~~~---~d~~~gfr~~~r~~~~~l~~~~~~----~~~~~~l~~~~g~~i~evpv~~ 200 (325)
T PRK10714 144 R--LIQRTTGKAM---GDYGCMLRAYRRHIVDAMLHCHER----STFIPILANTFARRAIEIPVHH 200 (325)
T ss_pred H--HHHHHcCCCC---CCCCcCeEEEcHHHHHHHHHCCCC----ccHHHHHHHHcCCCEEEEEeEe
Confidence 1 1111111111 111233458999999988433332 2233455567899988877543
|
|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.4e-15 Score=131.79 Aligned_cols=152 Identities=27% Similarity=0.322 Sum_probs=119.0
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||++|+.+.+.++++|+.+|+++..+ |+++|| ++|++.+ .+++..+. ....... ....++|
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~--i~i~~~~~~~~~~~---------~~~~~~~~----~~~~~~~-~~~~~~g 64 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFE--VIVVDDGSTDGTLE---------ILEEYAKK----DPRVIRV-INEENQG 64 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceE--EEEEeCCCCccHHH---------HHHHHHhc----CCCeEEE-EecCCCC
Confidence 5899999999999999999999986544 444554 5555444 44433221 2334444 3345567
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
+++++|.+++.+ ++|+++++|+|..++|+++..++..+..+++.+++++.
T Consensus 65 ~~~~~~~~~~~~---~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~--------------------------- 114 (156)
T cd00761 65 LAAARNAGLKAA---RGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP--------------------------- 114 (156)
T ss_pred hHHHHHHHHHHh---cCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc---------------------------
Confidence 999999999998 99999999999999999999986666578888888776
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEE
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~ 306 (534)
++++++++.++++|++++... .||.++..++...|++..
T Consensus 115 --------------~~~~~~~~~~~~~~~~~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 115 --------------GNLLFRRELLEEIGGFDEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred --------------chheeeHHHHHHhCCcchHhcCCcchHHHHHHHHhhccccc
Confidence 678899999999999987555 599999999999887653
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als |
| >KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=126.09 Aligned_cols=202 Identities=18% Similarity=0.148 Sum_probs=131.4
Q ss_pred CcEEEEEeccCchHHHHHHHH---HHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 91 PMVLVQIPMYNEKEVYKLSIG---AACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~---sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
++.||++|+|||.+++.-++. ....+.-.+.++ |+|+|+|+|.|.+ .++++.+.+ .+.++....|
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~ei-IivDD~SpDGt~~---------~a~~L~k~y--g~d~i~l~pR 70 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEI-IIVDDASPDGTQE---------VAKALQKIY--GEDNILLKPR 70 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEE-EEEeCCCCCccHH---------HHHHHHHHh--CCCcEEEEec
Confidence 578999999999976654433 333333333333 3366679999988 777666555 3567877777
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh-hhcc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE-MSLD 246 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~-~~~~ 246 (534)
.+..| -..|--.|+++| +|||++++|||-..+|.++.++++.. .+.+.++|.|.....+..-.-+..-+. ++..
T Consensus 71 ~~klG-LgtAy~hgl~~a---~g~fiviMDaDlsHhPk~ipe~i~lq-~~~~~div~GTRYa~~ggV~gW~mkRk~IS~g 145 (238)
T KOG2978|consen 71 TKKLG-LGTAYIHGLKHA---TGDFIVIMDADLSHHPKFIPEFIRLQ-KEGNYDIVLGTRYAGGGGVYGWDMKRKIISRG 145 (238)
T ss_pred cCccc-chHHHHhhhhhc---cCCeEEEEeCccCCCchhHHHHHHHh-hccCcceeeeeeEcCCCceecchhhHHHHhhh
Confidence 65555 888999999999 99999999999999999999999986 566778888876544432111111110 1111
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCC-CCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGG-WKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
..+. .+.. ...+....+|++.++|+++++..-. -...-..--+|+..|+.++|+.+.-+|-..
T Consensus 146 An~l-a~~l--l~~~~sdltGsFrLykk~vl~~li~e~vSkGyvfqmEll~ra~~~~y~IgEvPitF 209 (238)
T KOG2978|consen 146 ANFL-ARIL--LNPGVSDLTGSFRLYKKEVLEKLIEESVSKGYVFQMELLARARQHGYTIGEVPITF 209 (238)
T ss_pred hHHH-HHHh--ccCCCccCcceeeeehHHHHHhhHHHhhccchhhhHHHHHhccccCceEeecceEE
Confidence 1111 1110 0123344689999999999886410 000112347899999999998886666443
|
|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.3e-13 Score=128.97 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=84.0
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
+|||+||+|||++.+++||+|+..|. +++ |+|+|+|+|+|.+ ++++ .++++++. .+
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~---~ei-ivvD~gStD~t~~---------i~~~---------~~~~v~~~--~~ 56 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV---DEI-IVVDSGSTDRTVE---------IAKE---------YGAKVYQR--WW 56 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc---CEE-EEEeCCCCccHHH---------HHHH---------cCCEEEEC--CC
Confidence 48999999999999999999998873 243 3366679998877 6542 23455544 55
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 223 (534)
.|.+.++|.|++.+ ++|+|+++|+|..++|++++++...+.++|..+..
T Consensus 57 ~g~~~~~n~~~~~a---~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~~~~~ 105 (229)
T cd02511 57 DGFGAQRNFALELA---TNDWVLSLDADERLTPELADEILALLATDDYDGYY 105 (229)
T ss_pred CChHHHHHHHHHhC---CCCEEEEEeCCcCcCHHHHHHHHHHHhCCCCcEEE
Confidence 66999999999999 99999999999999999999999999666654333
|
UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. |
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-12 Score=121.29 Aligned_cols=106 Identities=28% Similarity=0.253 Sum_probs=85.1
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
.|.+||+||+||+++.+.++|+|+++|++++.+ +|+|+|+|+|+|.+ ++++...+. .++... ...
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~---------~~~~~~~~~----~~~~~~-~~~ 66 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTE---------IAIEYGAKD----VRVIRL-INE 66 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHH---------HHHHHhhhc----ceEEEe-ecc
Confidence 479999999999999999999999999999855 44477779999888 666554331 233333 345
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
.++|++.|+|.|+..+ .+|+++++|+|.. +++.+..+....
T Consensus 67 ~~~g~~~~~~~~~~~~---~~~~~~~~d~d~~-~~~~~~~~~~~~ 107 (291)
T COG0463 67 RNGGLGAARNAGLEYA---RGDYIVFLDADDQ-HPPELIPLVAAG 107 (291)
T ss_pred cCCChHHHHHhhHHhc---cCCEEEEEccCCC-CCHHHHHHHHHh
Confidence 6677999999999998 8899999999999 888888855544
|
|
| >KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-12 Score=124.52 Aligned_cols=210 Identities=16% Similarity=0.082 Sum_probs=142.8
Q ss_pred cCCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 87 NKSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 87 ~~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
++++|.+||+|.-+||. ..+.+|+.|+..-+-++.--+|+ |+|+|+.+-.+ +-++++...+ +-.+++
T Consensus 151 pe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLk--------ekLDeYv~~f---nGlVkV 219 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLK--------EKLDEYVKLF---NGLVKV 219 (603)
T ss_pred cccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHH--------HHHHHHHHHh---cCEEEE
Confidence 47899999999999999 99999999998866554433444 44557666666 6667776665 345666
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----------C
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD----------E 234 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----------~ 234 (534)
++.+++. |-..|+..|.++| .||.++++||.|.+.-+||.-++.++..|..+--| .-....+.+ .
T Consensus 220 ~Rne~RE-GLI~aRSiGA~~a---tGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTV-P~IDgId~n~~EyrpvyG~d 294 (603)
T KOG3737|consen 220 FRNERRE-GLIQARSIGAQKA---TGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTV-PLIDGIDGNTYEYRPVYGGD 294 (603)
T ss_pred Eecchhh-hhhhhhccchhhc---cccEEEEEecceeeecccccccccccccCceEEEE-eeeeeecCCceEEeeccCCc
Confidence 6444444 4888899999998 99999999999999999999999998555433221 111111111 1
Q ss_pred chhhHhHhhhcccch------hhhhh---cccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCC
Q 044519 235 CLMTRLQEMSLDYHF------SVEQE---VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKG 302 (534)
Q Consensus 235 ~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G 302 (534)
+-..+. .+++...+ ..++. ..+.....+.-.|.-+++.|+.+.+.|.||+... +|.+|+++++++-|
T Consensus 295 n~h~rG-ifeWgmLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCG 373 (603)
T KOG3737|consen 295 NDHARG-IFEWGMLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCG 373 (603)
T ss_pred chhhcc-hhhhhheeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeC
Confidence 100000 00111111 11111 1122222333468889999999999999998654 89999999999999
Q ss_pred CEEEEeccCcc
Q 044519 303 WKFVFVGDLGV 313 (534)
Q Consensus 303 ~ki~~~~~~~~ 313 (534)
-++.++|-..+
T Consensus 374 G~i~fVPCSrV 384 (603)
T KOG3737|consen 374 GKILFVPCSRV 384 (603)
T ss_pred CEEEEEEcccc
Confidence 99999997664
|
|
| >KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-12 Score=126.61 Aligned_cols=205 Identities=18% Similarity=0.128 Sum_probs=148.9
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEE-EEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIV-QVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I-~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
.++|+-||||.-+||+ ..+-+|+.|+++++-++.-.+| +|+|.|.|++.- +.+ .++ .+++++
T Consensus 121 ~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped~--------~~L----~ri----~kvr~L 184 (559)
T KOG3738|consen 121 VDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPEDG--------KLL----KRI----PKVRVL 184 (559)
T ss_pred cCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHHH--------HHH----hhh----heeeee
Confidence 4689999999999999 8999999999998855543344 455569988766 333 222 577887
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhhH---hH
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMTR---LQ 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~---~~ 241 (534)
+.+++. |-...++.|.+.| ++.++.|+|+.|....+||+-+++...+| ...+|++...+.|.+.- .... +.
T Consensus 185 RN~~Re-GLirSRvrGAdvA---~a~vltFLDSHcEvN~~WLePLL~Rvaed-~trvVsPiiDvIn~dnf~Y~~asadLr 259 (559)
T KOG3738|consen 185 RNNERE-GLIRSRVRGADVA---QATVLTFLDSHCEVNEGWLEPLLERVAED-TTRVVSPIIDVINLDNFSYVGASADLR 259 (559)
T ss_pred cccchh-hhhhhhccccccc---cceEEEEEecceeecchhhHHHHHHHhhc-ccceeecccccccccccccccchhhhc
Confidence 444444 4888899999988 99999999999999999999999998555 45677777777776521 1111 10
Q ss_pred -hhhcccchhhhhhc----cc-----ccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe
Q 044519 242 -EMSLDYHFSVEQEV----GS-----STCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 242 -~~~~~~~~~~~~~~----~~-----~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~ 308 (534)
.+.+..+|..++.. .+ .....+.+.|.-.++.|+.+.+.|.|+.+.- +|..|+++|++.-|..+..+
T Consensus 260 GGFDWsLhF~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIv 339 (559)
T KOG3738|consen 260 GGFDWSLHFKWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIV 339 (559)
T ss_pred CCcceEEEEEehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEE
Confidence 12333455444431 11 1112234679999999999999999997542 89999999999999999888
Q ss_pred ccCcc
Q 044519 309 GDLGV 313 (534)
Q Consensus 309 ~~~~~ 313 (534)
|-..+
T Consensus 340 PCSRV 344 (559)
T KOG3738|consen 340 PCSRV 344 (559)
T ss_pred eccch
Confidence 86654
|
|
| >KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-12 Score=131.51 Aligned_cols=211 Identities=15% Similarity=0.155 Sum_probs=149.6
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChh-hhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNE-VLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~-t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
+.+|..||||+-+||. .++-+++.|+.+..-+.--.+|+++||++|. ... +.++++.+++ ..++++
T Consensus 139 ~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~--------~~Ld~y~k~~----~~v~i~ 206 (578)
T KOG3736|consen 139 DKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLK--------DKLEEYVKRF----SKVRIL 206 (578)
T ss_pred cccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhh--------hhhHHHHhhh----cceeEE
Confidence 5689999999999999 8899999999887755444456666765544 334 3455555544 337777
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhH---hH-
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR---LQ- 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~---~~- 241 (534)
+.+++.| +..|+..|.+.| +||.++|+|+.+.....||+-++..+.+| ...+|++.....+.+.-.... ..
T Consensus 207 r~~~R~G-LIrARl~GA~~A---~geVL~FLDsHcE~n~gWLePLL~~I~~~-r~tvv~PvID~Id~~tf~y~~~~~~~r 281 (578)
T KOG3736|consen 207 RTKKREG-LIRARLLGASMA---TGEVLTFLDSHCEVNVGWLEPLLARIAED-RKTVVCPVIDVIDDNTFEYEKQSELMR 281 (578)
T ss_pred eecchhh-hHHHHhhhhhhh---hchheeeeecceeEecCcchHHHHHhhhc-CceeecceEEeecCcCceecccCccce
Confidence 6665665 999999999999 99999999999999999999999999544 556676666655543211111 00
Q ss_pred -hhhcccchhhhh------hcc---cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe
Q 044519 242 -EMSLDYHFSVEQ------EVG---SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 242 -~~~~~~~~~~~~------~~~---~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~ 308 (534)
.+.+...|.... ..+ ......+...|+..+++|+.|.++|+||+..- +|..|+++|++.-|-++..+
T Consensus 282 GgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~ 361 (578)
T KOG3736|consen 282 GGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIV 361 (578)
T ss_pred eeeecceeEEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEec
Confidence 111111222111 010 11222334679999999999999999998543 79999999999999999999
Q ss_pred ccCcccc
Q 044519 309 GDLGVKN 315 (534)
Q Consensus 309 ~~~~~~~ 315 (534)
|-..+-|
T Consensus 362 PCSrVGH 368 (578)
T KOG3736|consen 362 PCSRVGH 368 (578)
T ss_pred Cccceee
Confidence 9777644
|
|
| >KOG2977 consensus Glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.5e-10 Score=103.93 Aligned_cols=209 Identities=17% Similarity=0.091 Sum_probs=126.2
Q ss_pred cEEEEEeccCchHHHHHHHHHHH---cCCCCC---CceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAAC---GLSWPS---DRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~---~q~yp~---~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
.+||+||+|||+..+...++..+ +..|.. ...+|+ |+|||+|.|.+ ++-+++.++ ...++++
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~---------~a~k~s~K~--~~d~irV 136 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVE---------VALKFSRKL--GDDNIRV 136 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHH---------HHHHHHHHc--CcceEEE
Confidence 69999999999965554444332 233433 444554 45669999988 666777554 3467888
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCC--CCC-CHHHHHHHHHHHhc-CCcEEEEeeeeEeecCCCchhhH-
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDAD--FQP-DEDFLWRTIPYLLE-NKELGLVQARWKFVNADECLMTR- 239 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD--~~~-~pd~L~~lv~~~~~-~~~v~~V~~~~~~~n~~~~~~~~- 239 (534)
+...+ |.||+||...|+.++ +|+++++.||| +.+ +-+.|++.+..... .++-++++|...+....+....+
T Consensus 137 ~~l~~-nrgKGgAvR~g~l~~---rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va~GsrahLe~~~a~a~rs 212 (323)
T KOG2977|consen 137 IKLKK-NRGKGGAVRKGMLSS---RGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVACGSRAHLENTEAVAKRS 212 (323)
T ss_pred eehhc-cCCCCcceehhhHhc---cCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCceeecCHHHhhccHHHHHHh
Confidence 86554 445999999999999 99999999999 444 66777777765532 23444555554443321222222
Q ss_pred hHh--hhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCccccc
Q 044519 240 LQE--MSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVKNE 316 (534)
Q Consensus 240 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 316 (534)
+.. +.+.+|..+...+....... .-.+-++.|++.+.+-.|..- .-+-|.|+-+.+.+.+-.+.-+|. -|+|
T Consensus 213 ~~r~iLM~gFH~lv~~~a~rsI~DT---QcgfklftR~aa~~if~~lh~e~W~fdvEll~La~~~~ipi~ei~v--~w~E 287 (323)
T KOG2977|consen 213 VIRNILMYGFHKLVWIFAIRSIRDT---QCGFKLFTRAAARRIFPWLHVERWAFDVELLYLAKRFTIPIKEIPV--EWTE 287 (323)
T ss_pred HhhHHHHHHHHHHHHHHhcCccccc---chhHHHhHHHHHHhhcchhheeeeeccHHHHHHHHHcCCCcEEeee--EEEE
Confidence 111 11222332222222222111 123568889998888544432 236699998888887766655543 4666
Q ss_pred CCcC
Q 044519 317 LPST 320 (534)
Q Consensus 317 ~p~t 320 (534)
.+.|
T Consensus 288 IdgS 291 (323)
T KOG2977|consen 288 IDGS 291 (323)
T ss_pred cCCc
Confidence 6655
|
|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.2e-09 Score=105.00 Aligned_cols=173 Identities=19% Similarity=0.176 Sum_probs=106.3
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC-
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR- 170 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~- 170 (534)
+.|+|++||.++.+++||+|+++|........|+|.+| +.+++.+ .++.+. .+++++...+.
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~---------~v~~~~-------~~i~~i~~~~~~ 65 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVAD---------VAKSFG-------DGVTHIQHPPIS 65 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHH---------HHHhhc-------cccEEEEccccc
Confidence 57999999999999999999999852222233445544 5444333 443321 23444432211
Q ss_pred --C-C---------CChh----HHHHHHHhhhccCCcEEEEecCCCCCCHHHH---HHHHHHHhcCCcEEEEeeeeEeec
Q 044519 171 --N-G---------YKAG----ALKEGLEKQYVKDCQFVVIFDADFQPDEDFL---WRTIPYLLENKELGLVQARWKFVN 231 (534)
Q Consensus 171 --~-g---------~Ka~----aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L---~~lv~~~~~~~~v~~V~~~~~~~n 231 (534)
+ | +-+. |+|.+++.. ++++++++|+|+++.||++ +++++.+++|+.+.+|++... |
T Consensus 66 ~~~~~~~~~~~~y~~ia~hyk~aln~vF~~~---~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd--n 140 (334)
T cd02514 66 IKNVNPPHKFQGYYRIARHYKWALTQTFNLF---GYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND--N 140 (334)
T ss_pred ccccCcccccchhhHHHHHHHHHHHHHHHhc---CCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc--C
Confidence 1 0 0122 788888776 8999999999999999955 777888888999999998642 2
Q ss_pred CCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHH--HhCCCEE
Q 044519 232 ADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRA--SLKGWKF 305 (534)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl--~~~G~ki 305 (534)
+........ .........++|.+=+.+|+++++.. .|+. -|+|..+|. +++|-.+
T Consensus 141 G~~~~~~~~---------------~~~lyrs~ff~glGWml~r~~W~e~~~~wp~----~~WD~w~R~~~~rkgr~c 198 (334)
T cd02514 141 GKEHFVDDT---------------PSLLYRTDFFPGLGWMLTRKLWKELEPKWPK----AFWDDWMRLPEQRKGREC 198 (334)
T ss_pred CcccccCCC---------------cceEEEecCCCchHHHHHHHHHHHhCCCCCC----CChHHhhcchhhhcCCcc
Confidence 111000000 00111112346777677788887762 2332 388888886 4666444
|
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. |
| >PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.6e-09 Score=98.16 Aligned_cols=181 Identities=14% Similarity=0.207 Sum_probs=95.9
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
||| |.|.|.++..++|++++.++..|+.+ .| -+|+.. +. .
T Consensus 1 isi-I~c~n~~~~~~~~~~~i~~~~~~~~~-~i-~i~~~~------------------------------------~~-~ 40 (217)
T PF13712_consen 1 ISI-IICVNDEELYEECLRSIKRLIGPPGE-LI-EIDNVR------------------------------------NA-K 40 (217)
T ss_dssp EEE-EEEES-HHHHHHHHHHHHHTT--TEE-EE-EEE-SS------------------------------------S--S
T ss_pred CEE-EEEECCHHHHHHHHHHHHhhCCCCce-EE-EEeccC------------------------------------CC-c
Confidence 344 45557777888899999999888643 22 222211 11 2
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEe--eeeEeecCCCchhhHhHh----hhc
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQ--ARWKFVNADECLMTRLQE----MSL 245 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~--~~~~~~n~~~~~~~~~~~----~~~ 245 (534)
+-+.+.|.|+++| +++|+++++.|..+ +++|+.++++.|+++|++|+++ |... ..++..++..... ..+
T Consensus 41 s~~~~yN~a~~~a---~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~-~~~~~~~w~~~~~~g~~~~~ 116 (217)
T PF13712_consen 41 SMAAAYNEAMEKA---KAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKR-LPPNGVWWESPNKVGKVREY 116 (217)
T ss_dssp -TTTHHHHHGGG-----SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEES-S-S-TTS---EEEEEETTEE
T ss_pred CHHHHHHHHHHhC---CCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCc-CCCCCccccccccccccccc
Confidence 2667899999999 99999999999777 7999999999998899987765 2221 1222222211100 000
Q ss_pred ccc---hhh---hhh-c----ccccCccccccCCcchhhHHHHHHhCCCCCCCc----cchHHHHHHHHhCCCEEEEecc
Q 044519 246 DYH---FSV---EQE-V----GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT----VEDMDLAVRASLKGWKFVFVGD 310 (534)
Q Consensus 246 ~~~---~~~---~~~-~----~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~----~ED~~l~~rl~~~G~ki~~~~~ 310 (534)
... ... ... . ......+-.+-|..++.+++.+ +|+++.. .-|.|+++++.++|+++ ++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v-~~~~ 191 (217)
T PF13712_consen 117 GRIMHGHGPNSAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRV-VVPP 191 (217)
T ss_dssp EE----E-------------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EE-EE--
T ss_pred ccccccccccccccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEE-EecC
Confidence 000 000 000 0 0011222235699999999998 7888743 46999999999999999 6677
Q ss_pred CcccccCCcCHH
Q 044519 311 LGVKNELPSTFK 322 (534)
Q Consensus 311 ~~~~~~~p~t~~ 322 (534)
+.+.|....++.
T Consensus 192 ~~~~H~s~g~~~ 203 (217)
T PF13712_consen 192 PWCIHFSGGSFD 203 (217)
T ss_dssp ---EE-S----S
T ss_pred ceEEEcCCCCcc
Confidence 778888877654
|
|
| >cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.5e-08 Score=88.92 Aligned_cols=177 Identities=16% Similarity=0.124 Sum_probs=112.7
Q ss_pred cEEEEEeccCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAAC----GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
+|+|+||-+|.++.+...+..+. +|. -+..|+|+....+.
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~---~~~~i~vi~Q~~~~--------------------------------- 46 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQ---LDYRIFVIEQVGNF--------------------------------- 46 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHHHHHhcC---CcEEEEEEEecCCc---------------------------------
Confidence 68999999999988888776663 232 22345555443221
Q ss_pred cCCCCCChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 168 KNRNGYKAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
.-.|+..+|.|+..|.. .+.|++++-|.|-+|..+.+... +.+.|.-..+.-. .....
T Consensus 47 ---~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y~---~~~~p~H~s~~~~---------------~~~~~ 105 (219)
T cd00899 47 ---RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPENDRNLYG---CEEGPRHLSVPLD---------------KFHYK 105 (219)
T ss_pred ---cchhhhhhhHHHHHHhhcCCccEEEEecccccccCcccccc---CCCCCeEEEEeec---------------ccccc
Confidence 11266678998887733 24799999999999988875432 1122221111100 00000
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCcc-----cc-c-
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLGV-----KN-E- 316 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~-----~~-~- 316 (534)
. ....+.|++++++|+.+.+++||++... +||.|+..|+..+|.++...+.... ++ +
T Consensus 106 l-------------py~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~ 172 (219)
T cd00899 106 L-------------PYKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHD 172 (219)
T ss_pred c-------------CcccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCC
Confidence 0 0112358899999999999999998554 6999999999999999888876553 12 1
Q ss_pred -----CCcCHHHHHHHHhhhccchhhH
Q 044519 317 -----LPSTFKAYRYQQHRWSCGPSNL 338 (534)
Q Consensus 317 -----~p~t~~~~~~Qr~RW~~G~~~~ 338 (534)
-|.-++....++.||+...+..
T Consensus 173 ~r~~~N~~r~~~l~~~~~~~~~dGLns 199 (219)
T cd00899 173 KRNRDNPNRFALLQNSRERDHSDGLNS 199 (219)
T ss_pred cccccCHHHHHHHHhhCeEeccCCccc
Confidence 1223444566677777766543
|
Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen. |
| >PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.8e-05 Score=75.45 Aligned_cols=116 Identities=17% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEE-EEEcCCC--hhhhchhhhhhhHHHHHHHHHHHhh------c
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIV-QVLDDST--NEVLRTDFFQYTQKLVELECLKWIE------K 158 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I-~V~Dds~--D~t~~~~~~~~~~~~v~~~~~~~~~------~ 158 (534)
.+-|+|-|+.|..|.+..+.+-.+.+.+++||++.+.+ +++.+++ |.+.+ .+++..++.+. +
T Consensus 22 ~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~---------~l~~~~~~~q~~~~~~~~ 92 (269)
T PF03452_consen 22 RNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLK---------ILEAALKKLQSHGPESKR 92 (269)
T ss_pred ccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHH---------HHHHHHHHHhccCcccCC
Confidence 56789999999999999999999999999999998877 5667777 66665 55444444322 1
Q ss_pred CccEEEEEec----------CCCC---------CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHH
Q 044519 159 GVNVKYETRK----------NRNG---------YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIP 212 (534)
Q Consensus 159 ~~~v~~~~r~----------~~~g---------~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~ 212 (534)
...+.+++.+ ++.. --|.|+|..+-.+.....+||+.+|+|.+- +|+.++.++.
T Consensus 93 F~~itIl~~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~ 166 (269)
T PF03452_consen 93 FRSITILRKDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIA 166 (269)
T ss_pred cceEEEEcCCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHh
Confidence 2334444322 1111 134566888877766688999999999766 7777777755
|
These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes []. |
| >COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00069 Score=63.06 Aligned_cols=196 Identities=15% Similarity=0.143 Sum_probs=106.4
Q ss_pred CcEEEEEeccCch--H-HHHHHHH--HHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 91 PMVLVQIPMYNEK--E-VYKLSIG--AACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 91 P~VsViIP~yne~--~-~l~~~L~--sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
|+.+++||+-..+ + .-.+.+. ++++---+.+...|+++|+++-. . ..+ ..+-++..++.|+
T Consensus 2 ~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~--d--------~~i----~~~i~~~~~~~yl 67 (346)
T COG4092 2 QPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVM--D--------RLI----RSYIDPMPRVLYL 67 (346)
T ss_pred CCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhH--H--------HHH----HHHhccccceEEE
Confidence 5678889886443 2 2233333 22332234556677788885521 1 133 3333456788888
Q ss_pred EecCCCCC--ChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHHHHHHh---cCCcE-EEEeeeeEeecCCCchhh
Q 044519 166 TRKNRNGY--KAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRTIPYLL---ENKEL-GLVQARWKFVNADECLMT 238 (534)
Q Consensus 166 ~r~~~~g~--Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~---~~~~v-~~V~~~~~~~n~~~~~~~ 238 (534)
.-..++.. -+...|.|...+.. -+.++|+++|+||....|-..+++.... -..++ +...-++.+.|...+..-
T Consensus 68 ~~~s~~~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~ 147 (346)
T COG4092 68 DFGSPEPFASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVF 147 (346)
T ss_pred ecCCCccccchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHH
Confidence 54333321 24455666666521 2489999999999999776666653221 01233 334445566776433211
Q ss_pred -HhHhhhcccch--hhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHh
Q 044519 239 -RLQEMSLDYHF--SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASL 300 (534)
Q Consensus 239 -~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~ 300 (534)
....+.++... ......+....-+.....+..++.|+.+...||++++.. +||.|+..|+..
T Consensus 148 f~~~d~f~d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l 215 (346)
T COG4092 148 FDVEDMFLDAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGL 215 (346)
T ss_pred HHHHHHhhhhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHH
Confidence 11111111100 000011112222223345667899999999999998654 799999998864
|
|
| >PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00034 Score=68.26 Aligned_cols=131 Identities=18% Similarity=0.235 Sum_probs=72.5
Q ss_pred CCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 90 YPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 90 ~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
+-..+|+||+.||+ +.++..|.++ |++..+| |+.+|+.... +.|+.-.++++.+|+.- .-++..+|..
T Consensus 49 l~~maIVVP~KnE~l~lleGVL~gI-----Ph~C~II-vVSNS~r~~~--d~f~~E~d~l~~f~~~t---~r~~~~vHQk 117 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKLKLLEGVLSGI-----PHDCLII-VVSNSSREPV--DRFKMEVDLLKHFCRLT---RRQIIIVHQK 117 (381)
T ss_dssp HTTEEEEEEESS--HHHHHHHHHCS------TTSEEE-EEE---CSSS--CHHHHHHHHHHHHHHHC---T--EEEEETT
T ss_pred HhCcEEEEECCCCchhhhhhhhhcC-----CCCCeEE-EEECCCCCCc--cHHHHHHHHHHHHHHhh---cCceEEEecC
Confidence 45789999999999 7777766655 7776666 6666554332 23444446777776541 2334444431
Q ss_pred -----------------CC----CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHH-hcCCcEEEE
Q 044519 169 -----------------NR----NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYL-LENKELGLV 223 (534)
Q Consensus 169 -----------------~~----~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~-~~~~~v~~V 223 (534)
.. +.||+.++-.|+-.|.....+||-|+|||...+-..-+.+ ...| .+.....+|
T Consensus 118 Dp~lA~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiPGaV~EYvk~yAAGf~ms~spytMV 197 (381)
T PF09488_consen 118 DPGLAEAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIPGAVNEYVKDYAAGFAMSESPYTMV 197 (381)
T ss_dssp -HHHHHHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-HHHHHHHHHHHHHHHHC-SSSCEEE
T ss_pred CHHHHHHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCcchHHHHHHHHHhhhcccCCCceEE
Confidence 11 1269999999998887778999999999988755433332 2222 245677788
Q ss_pred eeeeEeec
Q 044519 224 QARWKFVN 231 (534)
Q Consensus 224 ~~~~~~~n 231 (534)
--.|.+..
T Consensus 198 Ri~W~~KP 205 (381)
T PF09488_consen 198 RIHWRSKP 205 (381)
T ss_dssp EEE-----
T ss_pred EEEecCCC
Confidence 77777654
|
Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A. |
| >PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00043 Score=70.55 Aligned_cols=187 Identities=17% Similarity=0.182 Sum_probs=91.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
...|.+.|+|-+||.++.+.+||+++++..-..++..|+|..|+.++... +.++. + +..+.+++.
T Consensus 90 ~~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~--------~vi~~----y---~~~v~~i~~ 154 (434)
T PF03071_consen 90 NKEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVA--------EVIKS----Y---GDQVTYIQH 154 (434)
T ss_dssp -------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHH--------HHHHG----G---GGGSEEEE-
T ss_pred cCCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHH--------HHHHH----h---hhhheeeec
Confidence 45678899999999999999999999986522345556677776665555 34443 2 123444432
Q ss_pred cC------CCCC-C-------hhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHH---HHHHhcCCcEEEEeeeeEe
Q 044519 168 KN------RNGY-K-------AGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRT---IPYLLENKELGLVQARWKF 229 (534)
Q Consensus 168 ~~------~~g~-K-------a~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~~~~ 229 (534)
.. .++. | +.....|+.+... .+++.++++.+|..+.||+++.+ .+.+.+||.+-+|++--
T Consensus 155 ~~~~~i~~~~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawN-- 232 (434)
T PF03071_consen 155 PDFSPITIPPKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWN-- 232 (434)
T ss_dssp S--S-----TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES----
T ss_pred CCcCCceeCcccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEccc--
Confidence 21 1110 1 1122333443322 36899999999999999999764 45567799999998752
Q ss_pred ecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEE
Q 044519 230 VNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVF 307 (534)
Q Consensus 230 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~ 307 (534)
.|+........ ........-.++|-+=+.+|+.++++. .|+.. .- |..+-....++|-.++.
T Consensus 233 dnG~~~~~~~~--------------~~~~lyRsdffpglGWml~r~~w~el~~~Wp~~-~W-DdwmR~~~~rkgR~cIr 295 (434)
T PF03071_consen 233 DNGKEHFVDDS--------------RPSLLYRSDFFPGLGWMLTRELWDELEPKWPKA-FW-DDWMRQPEQRKGRQCIR 295 (434)
T ss_dssp TT-BGGGS-TT---------------TT-EEEESS---SSEEEEHHHHHHHGGG--SS--H-HHHHTSHHHHTT-EEEE
T ss_pred cCCccccccCC--------------CccceEecccCCchHHHhhHHHHHhhcccCCCC-Cc-hhhhcCccccCCCceee
Confidence 12111110000 001111222357888899999999875 36532 22 33344445678877665
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A. |
| >KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0019 Score=62.87 Aligned_cols=202 Identities=18% Similarity=0.167 Sum_probs=116.4
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-+.|.|.+++|..++.....+...+++...-.+-++.|+...-|.|+..++ +.+ ..++.+..++..+..
T Consensus 226 i~~pgih~i~pl~gr~~~f~rf~q~~c~~~d~~l~l~vv~f~~se~e~ak~-------e~~----tslra~f~~~q~l~l 294 (494)
T KOG3588|consen 226 IEDPGIHMIMPLRGRAAIFARFAQSICARGDDRLALSVVYFGYSEDEMAKR-------ETI----TSLRASFIPVQFLGL 294 (494)
T ss_pred ccCCCceEEEeccchHHHhhhhhHHHhccCCCceEEEEEEecCCChHHHhh-------hHH----HHHhhcCCceEEecc
Confidence 356889999999999999999999988765444444443333455554441 122 233334456655532
Q ss_pred cCCCCCChhHHHHHHHhhhccCCc-EEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeE-eecCCCchhhHhHhhhc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQ-FVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWK-FVNADECLMTRLQEMSL 245 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d-~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~-~~n~~~~~~~~~~~~~~ 245 (534)
+..-..+.||..|.+.. +.+ .+.+.|.|....-++|.++-..- -|+--+--+... ..|+ ..+.. |...
T Consensus 295 -ngeFSRa~aL~vGAe~~---~~nvLLFfcDVDi~FT~efL~rcr~Nt--~~gkqiyfPivFS~ynp-~ivy~--~~~~- 364 (494)
T KOG3588|consen 295 -NGEFSRAKALMVGAETL---NANVLLFFCDVDIYFTTEFLNRCRLNT--ILGKQIYFPIVFSQYNP-EIVYE--QDKP- 364 (494)
T ss_pred -cchhhhhHHHHhhHHHh---ccceeEEEeccceeehHHHHHHHhhcc--CCCceEEEEEEEeecCc-ceeec--CCCC-
Confidence 22234777899998886 455 45567999999999999874332 233222211111 1122 11111 1000
Q ss_pred ccchhhhhhcc--cccCcccccc-CCcchhhHHHHHHhCCCCCCC---ccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 246 DYHFSVEQEVG--SSTCQFFGFN-GTAGVWRIQAIEDAGGWKDRT---TVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 246 ~~~~~~~~~~~--~~~~~~~~~~-G~~~~~Rr~~l~~~Gg~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
...++... ...+.+-.+. |-.+.+ |+.+.++||||.+. -.||.++-.+..+.|.+++-.|++-..
T Consensus 365 ---~p~e~~~~~~~~tGfwRdfGfGmtc~y-rsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~ 435 (494)
T KOG3588|consen 365 ---LPAEQQLVIKKDTGFWRDFGFGMTCQY-RSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLF 435 (494)
T ss_pred ---CchhHheeeccccccccccCCceeEEe-eccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceE
Confidence 00111100 0111111122 444444 56677899999643 379999999999999999999987643
|
|
| >PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00067 Score=66.18 Aligned_cols=130 Identities=17% Similarity=0.201 Sum_probs=79.0
Q ss_pred CCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-.-..+|+|||.||. ..++..|.++ |++..+| |+.+|+.+.. +.|+...++++.+|+-- + -++..++.
T Consensus 49 i~~~mAIVVP~KdE~l~lleGVL~gI-----Ph~c~iI-vVSNS~r~~~--d~f~~E~dlv~~f~~~t-~--r~~i~vHQ 117 (393)
T PRK14503 49 ILGRMAIVVPVKNERLKLLEGVLKGI-----PHECPII-VVSNSKREPP--DRFKLEVDLVRHFYRLT-Q--RPIIIVHQ 117 (393)
T ss_pred HHhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCCc--hHHHHHHHHHHHHHhhh-c--CceEEEEc
Confidence 345789999999999 7666666555 7776666 6667654332 24444446676666531 1 22233322
Q ss_pred c-----------------CC----CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHH-hcCCcEEE
Q 044519 168 K-----------------NR----NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYL-LENKELGL 222 (534)
Q Consensus 168 ~-----------------~~----~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~-~~~~~v~~ 222 (534)
. .. +.||+.++-.|+-.|.....+||-|+|||...+-..-+.+ ...| .+.....+
T Consensus 118 kDp~la~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPGaV~EYvk~yAAGf~ma~spytM 197 (393)
T PRK14503 118 KDPGLAEALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIPGAVNEYVKIYAAGFLMAESPYTM 197 (393)
T ss_pred CCHHHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCCchHHHHHHHHHhhhcccCCCCce
Confidence 1 11 1269999999998876678999999999988765433332 2222 12233455
Q ss_pred EeeeeEe
Q 044519 223 VQARWKF 229 (534)
Q Consensus 223 V~~~~~~ 229 (534)
|--.|.+
T Consensus 198 VRi~W~~ 204 (393)
T PRK14503 198 VRIHWRY 204 (393)
T ss_pred EEEEecC
Confidence 5555543
|
|
| >TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00076 Score=65.39 Aligned_cols=130 Identities=16% Similarity=0.179 Sum_probs=78.9
Q ss_pred CCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-.-..+|+|||.||. ..++..|.++ |++..+| |+.+|+.+.. +.|+...++++.+|+-- .-++..++.
T Consensus 48 i~~~maIVVP~KdE~l~lleGVL~gI-----Ph~c~iI-vVSNS~r~~~--d~f~~E~d~~~~f~~~t---~r~~i~vHQ 116 (381)
T TIGR02460 48 LLGKTAIVVPVKNEKLHLLEGVLSGI-----PHECPII-IVSNSKREPP--DRFKMEVDLIRHFSNLT---HRKIIIIHQ 116 (381)
T ss_pred HHhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCCh--hHHHHHHHHHHHHHHhh---cCceEEEEc
Confidence 345789999999999 6666666554 7776666 6666654332 24444445676666531 122333332
Q ss_pred c------------------C---CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHH---HHH-hcCCcEEE
Q 044519 168 K------------------N---RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTI---PYL-LENKELGL 222 (534)
Q Consensus 168 ~------------------~---~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv---~~~-~~~~~v~~ 222 (534)
. + -+.||+.++-.|+-.|.....+||-|+|||...+-..-+.+- ..| .+.....+
T Consensus 117 kDp~la~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPGaV~EYvk~yAaGf~ma~spy~M 196 (381)
T TIGR02460 117 KDPALAEAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFPGAVNEYVKIYAAGFLMATSPYSM 196 (381)
T ss_pred CCHHHHHHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCCchHHHHHHHHHhhhcccCCCCee
Confidence 1 1 112699999999988766789999999999887654333332 222 12233455
Q ss_pred EeeeeEe
Q 044519 223 VQARWKF 229 (534)
Q Consensus 223 V~~~~~~ 229 (534)
|--.|.+
T Consensus 197 VRi~W~~ 203 (381)
T TIGR02460 197 VRIHWRY 203 (381)
T ss_pred EEEEecC
Confidence 5555543
|
This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase. |
| >PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0094 Score=63.38 Aligned_cols=205 Identities=18% Similarity=0.134 Sum_probs=113.0
Q ss_pred CCCcEEEEEeccCc-hHHHHHHHHHHHc---CCCCCCceEEEEEcCC-ChhhhchhhhhhhHHHHHHHHHHHhhcCccEE
Q 044519 89 SYPMVLVQIPMYNE-KEVYKLSIGAACG---LSWPSDRLIVQVLDDS-TNEVLRTDFFQYTQKLVELECLKWIEKGVNVK 163 (534)
Q Consensus 89 ~~P~VsViIP~yne-~~~l~~~L~sl~~---q~yp~~~~~I~V~Dds-~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~ 163 (534)
+...|.||||+.+. .+.+.+-++...+ +.-.+-.+.| |...+ .|..... ...+.++++.+++ ...++.
T Consensus 245 ~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~v-V~~~~~~~~~~~~----~ik~~l~~l~~k~--~~~~i~ 317 (499)
T PF05679_consen 245 ESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTV-VLFYDPSDSDSIS----QIKELLEELERKY--PFSRIK 317 (499)
T ss_pred CCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEE-EEecCcccchhHH----HHHHHHHHHHHhC--CccceE
Confidence 34789999999999 6777777766543 2211222333 44433 3322110 0113555555554 346677
Q ss_pred EEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEe--ecCCCchhhHhH
Q 044519 164 YETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKF--VNADECLMTRLQ 241 (534)
Q Consensus 164 ~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~--~n~~~~~~~~~~ 241 (534)
++......-.++.+++.|++.. ...+++.++|.|..+++|+|.++-..-... -- |--|..+ .|++...-. ..
T Consensus 318 ~i~~~~~~fsr~~~Ld~g~~~~--~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g--~q-vy~PI~Fs~y~p~~~~~~-~~ 391 (499)
T PF05679_consen 318 WISVKTGEFSRGAALDVGAKKF--PPDSLLFFCDVDMVFTSDFLNRCRMNTIPG--KQ-VYFPIVFSQYNPDIVYAG-KP 391 (499)
T ss_pred EEEecCCCccHHHHHHhhcccC--CCCcEEEEEeCCcccCHHHHHHHHHhhhcC--cE-EEEeeeccccCCcccccC-CC
Confidence 7765534445888999999864 567899999999999999999985443122 11 1222222 122210000 00
Q ss_pred hhhcccchhhhhhcccccCcccccc-CCcchhhHHHHHHh--CCCCCC---CccchHHHHHHHHhCC--CEEEEeccCcc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFN-GTAGVWRIQAIEDA--GGWKDR---TTVEDMDLAVRASLKG--WKFVFVGDLGV 313 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~Rr~~l~~~--Gg~~~~---~~~ED~~l~~rl~~~G--~ki~~~~~~~~ 313 (534)
.....+.. ....|.+-.++ |-.++++.+ +.++ ||++.. ...||.|+.-+..+.| .++.-.+++..
T Consensus 392 --~~~~~~~i----~~~~G~w~~~gfg~~~~YksD-y~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~L 464 (499)
T PF05679_consen 392 --PEPDQFDI----SKDTGFWRRFGFGMVCFYKSD-YMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPGL 464 (499)
T ss_pred --CccccCcc----CCCCCccccCCCceEEEEhhh-hhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCCe
Confidence 00000111 11111111111 445555554 5555 667653 3489999999999999 78887777653
|
Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0045 Score=66.64 Aligned_cols=111 Identities=16% Similarity=0.207 Sum_probs=72.3
Q ss_pred CCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-.-..+|+|||.||+ ..++..|.++ |++..+| |+.+|+.+... .|+...++++.+|+-- . -++..+|.
T Consensus 53 ~~~~~aivvp~k~e~~~~~~gvl~~i-----p~~c~ii-~vsns~r~~~d--~~~~e~~~~~~~~~~~-~--~~~~~vhq 121 (694)
T PRK14502 53 VEKKMAIVLPIKDEDLKVFEGVLSGI-----PHDCLMI-VISNSSKQEVD--NFKNEKDIVNRFCRIT-H--RQAIVVHQ 121 (694)
T ss_pred HHhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCchH--HHHHHHHHHHHHHHhh-c--CceEEEEc
Confidence 345789999999999 7677666555 7776666 67776543322 3444445676666532 1 12223322
Q ss_pred c--------------------C-CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH
Q 044519 168 K--------------------N-RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 168 ~--------------------~-~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
. . -+.||+.++-.|+-.|.....+||-|+|||...+-...+.+
T Consensus 122 ~dp~~a~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~pg~v~ey~ 185 (694)
T PRK14502 122 KNPELANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIPGAVWEYA 185 (694)
T ss_pred CCHHHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCCchHHHHH
Confidence 1 1 11269999999998887778999999999988765544443
|
|
| >KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0027 Score=61.51 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=79.9
Q ss_pred ChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 174 KAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 174 Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
+|.-+|.|+..|.. ...|-+++-|.|.+|..|- |. ..|+.. ...+...+.... |.
T Consensus 199 RakL~NVGf~eAlkd~~wdCfIFHDVDllPenDr----------Nl---Y~C~~~-----PRH~sva~dk~g----y~-- 254 (372)
T KOG3916|consen 199 RAKLLNVGFLEALKDYGWDCFIFHDVDLLPENDR----------NL---YGCPEQ-----PRHMSVALDKFG----YR-- 254 (372)
T ss_pred HHHhhhhHHHHHHHhcCCCEEEEecccccccCCC----------Cc---cCCCCC-----Ccchhhhhhhcc----cc--
Confidence 56667888887743 4678899999999886541 10 011110 011111111110 00
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCcc-----cc----c--CC
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLGV-----KN----E--LP 318 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~-----~~----~--~p 318 (534)
.....+-|.-.++.++-++++.||+.... +||-|+.-|+...|++|---|.... .+ + -|
T Consensus 255 -------LPY~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~n~ 327 (372)
T KOG3916|consen 255 -------LPYKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEPNP 327 (372)
T ss_pred -------ccchhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCCCh
Confidence 00111347778899999999999997544 8999999999999999854332221 11 1 13
Q ss_pred cCHHHHHHHHhhhccchhhHHh
Q 044519 319 STFKAYRYQQHRWSCGPSNLFS 340 (534)
Q Consensus 319 ~t~~~~~~Qr~RW~~G~~~~~~ 340 (534)
..++-+.+-..||.+..+..+.
T Consensus 328 ~Ry~lL~~tk~r~~~DGLnsl~ 349 (372)
T KOG3916|consen 328 GRYKLLRNTKERQTQDGLNSLK 349 (372)
T ss_pred HHHHHHHhhhhhhhhcccccee
Confidence 3455556666777776665443
|
|
| >PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.00079 Score=51.98 Aligned_cols=49 Identities=29% Similarity=0.202 Sum_probs=35.1
Q ss_pred cccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCc
Q 044519 264 GFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 264 ~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
.+.|+..+++|+.++++|||++... .||.|+..|+..+|.++...+...
T Consensus 18 ~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~ 69 (78)
T PF02709_consen 18 NFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSI 69 (78)
T ss_dssp T---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTT
T ss_pred CeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCce
Confidence 3569999999999999999998655 699999999999999987766544
|
The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A .... |
| >PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0038 Score=50.50 Aligned_cols=82 Identities=16% Similarity=0.083 Sum_probs=50.9
Q ss_pred cCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC--C-CChh
Q 044519 100 YNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN--G-YKAG 176 (534)
Q Consensus 100 yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~--g-~Ka~ 176 (534)
+||+..|.+.|....++... ++.| ++|+|+|+|.+ ++++. .++.++....+. . .+..
T Consensus 1 rne~~~L~~wl~~~~~lG~d--~i~i-~d~~s~D~t~~---------~l~~~--------~~v~i~~~~~~~~~~~~~~~ 60 (97)
T PF13704_consen 1 RNEADYLPEWLAHHLALGVD--HIYI-YDDGSTDGTRE---------ILRAL--------PGVGIIRWVDPYRDERRQRA 60 (97)
T ss_pred CChHHHHHHHHHHHHHcCCC--EEEE-EECCCCccHHH---------HHHhC--------CCcEEEEeCCCccchHHHHH
Confidence 69999999999999887653 3444 67779998877 65432 223344332211 1 1222
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCC
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPD 203 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~ 203 (534)
.++...+. ..++|+++++|+|-.+.
T Consensus 61 ~~~~~~~~--~~~~dWvl~~D~DEfl~ 85 (97)
T PF13704_consen 61 WRNALIER--AFDADWVLFLDADEFLV 85 (97)
T ss_pred HHHHHHHh--CCCCCEEEEEeeeEEEe
Confidence 33333333 24889999999996653
|
|
| >PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.014 Score=55.30 Aligned_cols=93 Identities=15% Similarity=0.104 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhhh
Q 044519 107 KLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQY 186 (534)
Q Consensus 107 ~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~ 186 (534)
.-||.|+.+|+-|++.+.|++.++.+++ .. +.++++++.+ ++++.+..++ +....++...++.+.
T Consensus 45 ~~~LpSl~~QTd~dF~~lv~~~~~~P~~-~~--------~rL~~l~~~~----p~~~i~~~~~--~~~~~~~~~~~~~~~ 109 (234)
T PF11316_consen 45 TYCLPSLRAQTDQDFTWLVLFDDDLPEP-YR--------ERLRDLLADY----PQFRIVFRPP--GPHRDAMRRAINAAR 109 (234)
T ss_pred HHHhhHHHhccCCCeEEEEEECCCCCHH-HH--------HHHHHHhccC----CCcEEEecCC--chHHHHHHHHHhhhc
Confidence 4589999999999888777444444443 33 3555555443 3455553433 325567777775544
Q ss_pred ccCCcEEEEe--cCCCCCCHHHHHHHHHHH
Q 044519 187 VKDCQFVVIF--DADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 187 ~~~~d~v~~l--DaD~~~~pd~L~~lv~~~ 214 (534)
....++++.+ |+|+-++.|+++++-...
T Consensus 110 ~~~~~~~~~~RLDdDDAl~~dFV~rlr~~a 139 (234)
T PF11316_consen 110 RDGADPVLQFRLDDDDALHRDFVARLRRAA 139 (234)
T ss_pred cCCCCEEEEEEECCcchhhHHHHHHHHHHH
Confidence 4567777665 999999999999998876
|
|
| >PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=96.05 E-value=0.01 Score=57.61 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=28.8
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL 215 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 215 (534)
.+|.|+-.+ +.||++.+|+|+.|..|.--..+..+.
T Consensus 82 ~R~fGyL~s---~~~yivsiDDD~~P~~D~~g~~~~~v~ 117 (348)
T PF03214_consen 82 CRNFGYLVS---KKDYIVSIDDDCLPAKDDFGTHIDAVA 117 (348)
T ss_pred hhhhHhhhc---ccceEEEEccccccccCCccceehhhh
Confidence 468898887 889999999999998777665555553
|
It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction |
| >PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.027 Score=54.44 Aligned_cols=103 Identities=18% Similarity=0.117 Sum_probs=69.7
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--C
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK--N 169 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~--~ 169 (534)
.++-.|=+.||+..++++|+|++-.- ++. |+.-+||+|+|.+ ++.++|+++|+. .++.|-... .
T Consensus 88 ~~~~~iRvKnE~~tl~~si~S~Lpai---~~g-VI~yNdc~D~t~E---------iil~fckkyP~f-ip~~Ypy~v~~~ 153 (347)
T PF06306_consen 88 NPWAFIRVKNEAMTLAESIESILPAI---DEG-VIGYNDCTDGTEE---------IILEFCKKYPSF-IPIKYPYEVIIK 153 (347)
T ss_pred CcceEEEEcchhhhHHHHHHHHHHHH---hcc-EEEeecCCCCHHH---------HHHHHHHhCccc-ccccCcchhhcc
Confidence 57888999999999999999997522 234 4478999999976 899999998752 333331110 1
Q ss_pred CCC----CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH
Q 044519 170 RNG----YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 170 ~~g----~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
+.. .+..=-|.++... .+++|++=+|+|.+.+++-|-+.
T Consensus 154 n~~~~~n~l~~YYNy~ls~i--pk~~w~iKID~DhIy~~~KL~ks 196 (347)
T PF06306_consen 154 NPKSEENSLYNYYNYVLSFI--PKNEWAIKIDADHIYDTKKLYKS 196 (347)
T ss_pred CCchhhhhhhhhhhhhhccc--ccceEEEEeccceeecHHHHhhh
Confidence 111 0111224444332 47899999999999999877554
|
|
| >KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.22 Score=48.80 Aligned_cols=176 Identities=16% Similarity=0.113 Sum_probs=104.5
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCC-CceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHh--h----cCc
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPS-DRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI--E----KGV 160 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~-~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~--~----~~~ 160 (534)
...|.+.|++=++|.++.++++++.++.+. |. ++.-|+|.-|+.++.+. +.++.+-.... . ...
T Consensus 64 ~~~~v~pvvVf~csR~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk--------~~~~~~g~~v~~i~~~~h~~~ 134 (411)
T KOG1413|consen 64 NWPPVIPVVVFACSRADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVK--------KKLLSYGSDVSHIQHPMHLKD 134 (411)
T ss_pred CCCCceeEEEEecCcHHHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHH--------HHHHHhccchhhhcCcccccc
Confidence 345678899999999999999999999877 54 45566688777776666 34433322110 0 011
Q ss_pred cEEEEEec-CCCCCChh------HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHHhcCCcEEEEeeeeEee
Q 044519 161 NVKYETRK-NRNGYKAG------ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYLLENKELGLVQARWKFV 230 (534)
Q Consensus 161 ~v~~~~r~-~~~g~Ka~------aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~~~~~ 230 (534)
.+.+-.+. +.++++.- |+|+.+.. .+.+.+++.-+|--..||+.... ...+..||.+-+|+.-- .
T Consensus 135 ei~v~~~~~k~~~Yy~IarHYkwAL~q~F~~---~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcvsaWN--D 209 (411)
T KOG1413|consen 135 EISVPPRHKKFNAYYKIARHYKWALNQLFIV---FRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCVSAWN--D 209 (411)
T ss_pred ccccCCcccccchhHHHHHHHHHHHhhHHhh---cCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEeeeec--c
Confidence 11111111 12222322 34444433 48899999999999999988764 44556788887775532 2
Q ss_pred cCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCC-CCCCCccchH
Q 044519 231 NADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGG-WKDRTTVEDM 292 (534)
Q Consensus 231 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~ 292 (534)
|+........+ .+.....-.|.|-+=++.++.+++... |+ ....||+
T Consensus 210 NGk~~~Id~~~--------------~~~lYRtDFFpGLGWml~~~~W~ELsp~wP-~~fWDDW 257 (411)
T KOG1413|consen 210 NGKKQTIDSTR--------------PSLLYRTDFFPGLGWMLTKKLWEELSPKWP-VAFWDDW 257 (411)
T ss_pred CCCcccccccc--------------cchhhhccccccchHHHHHHHHHhhCCCCc-ccchhhh
Confidence 33322211111 111222233578888999999999753 54 4556665
|
|
| >PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.25 Score=49.63 Aligned_cols=219 Identities=11% Similarity=0.067 Sum_probs=112.7
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC--CChhh-hchh-----------hhhhhHHHHHH-HHHHHh-
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD--STNEV-LRTD-----------FFQYTQKLVEL-ECLKWI- 156 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd--s~D~t-~~~~-----------~~~~~~~~v~~-~~~~~~- 156 (534)
|-|.|+.|..++ +..||.++.++.-.++++.|-|++. ..|+. .... +-+......+. .+.+.+
T Consensus 2 IFvsiasyRD~~-c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 80 (343)
T PF11397_consen 2 IFVSIASYRDPE-CAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWPD 80 (343)
T ss_pred EEEEEeeecCch-HHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhccccccccc
Confidence 568899999865 8889998877544446777766654 22222 1100 00000001100 000000
Q ss_pred ----hcCccEEEEEecCC-CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcC-CcEEEEeeeeEee
Q 044519 157 ----EKGVNVKYETRKNR-NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLEN-KELGLVQARWKFV 230 (534)
Q Consensus 157 ----~~~~~v~~~~r~~~-~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~-~~v~~V~~~~~~~ 230 (534)
....+|++++.+.. ..|-..|++.+.+.- .+-+|++.+|+.+...++|=..+++.+.+- .+-++.++.....
T Consensus 81 ~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~--~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~~ 158 (343)
T PF11397_consen 81 GALCLRSDQIRVIRVDASEARGPCWARYLAQKLY--RGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPGY 158 (343)
T ss_pred ccccccCCeEEEEEeCHHHCcChHHHHHHHHHHh--CCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCCc
Confidence 11345666654422 223566666666654 467899999999999999988888877432 3344555443332
Q ss_pred cC-C-C-----chhhHhHhhhc--ccchhhhhh-ccc--c--cCccccccCCcchh-hHHHHHHhCCCCCCC----ccch
Q 044519 231 NA-D-E-----CLMTRLQEMSL--DYHFSVEQE-VGS--S--TCQFFGFNGTAGVW-RIQAIEDAGGWKDRT----TVED 291 (534)
Q Consensus 231 n~-~-~-----~~~~~~~~~~~--~~~~~~~~~-~~~--~--~~~~~~~~G~~~~~-Rr~~l~~~Gg~~~~~----~~ED 291 (534)
+. + . +..+.+-...+ +........ ... . ......+.+++..| +-++++++ .+|++. .+|.
T Consensus 159 ~~~~~~~~~~~~~~~~lc~~~~~~~g~~~~~~~~~~~~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~GEE 237 (343)
T PF11397_consen 159 EPDGGQPEPEKTTVPRLCAARFGPDGMVRLGARWIKPAPKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFDGEE 237 (343)
T ss_pred ccccCCccccCCcccEEEEeEECCCCcEeecceecccccccCCCeeeceecccEEEcchhheecC-CCCCCcccccccHH
Confidence 22 0 0 00001000000 000000000 000 0 01112233444444 44555555 777765 3899
Q ss_pred HHHHHHHHhCCCEEEEeccCcccc
Q 044519 292 MDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 292 ~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
+-++.|+..+||.+.--+...+++
T Consensus 238 ~~~aaRlwT~GYD~Y~P~~~v~~H 261 (343)
T PF11397_consen 238 ISMAARLWTHGYDFYSPTRNVLFH 261 (343)
T ss_pred HHHHHHHHHcCCccccCCCceeEE
Confidence 999999999999995555666554
|
|
| >PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.59 Score=41.27 Aligned_cols=46 Identities=13% Similarity=0.163 Sum_probs=34.8
Q ss_pred CCCCCChhHHHHHHHhhh-ccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 169 NRNGYKAGALKEGLEKQY-VKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
+.|.+|-......+++-. .-+.++.+++|+.+.|.++.|.++.+.|
T Consensus 117 e~N~kKinSHrWfFnaf~~~l~P~vcvllDvGT~P~~~siy~Lwkaf 163 (163)
T PF01644_consen 117 EKNAKKINSHRWFFNAFCRQLQPNVCVLLDVGTKPGKDSIYHLWKAF 163 (163)
T ss_pred cccccccchhhHHHHHHHhhcCCcEEEEEecCCCcCchHHHHHHhhC
Confidence 445568777666665421 1388999999999999999999988764
|
4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process |
| >PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.4 Score=44.21 Aligned_cols=119 Identities=14% Similarity=0.020 Sum_probs=66.3
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeec-CCCchhhHhHhhhcccchhhhhhc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVN-ADECLMTRLQEMSLDYHFSVEQEV 255 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~ 255 (534)
+++.+.++. .+.+|++.+|+|+.+.++.|.+.+.....++.-..+.|...... .......++. ......
T Consensus 70 ~~~w~~~~c--~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~-------v~~~~y- 139 (195)
T PF01762_consen 70 GLKWASKHC--PNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWY-------VSEEEY- 139 (195)
T ss_pred HHHHHHhhC--CchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCce-------eeeeec-
Confidence 345555554 34899999999999999888887776522222222222221111 0000000000 000000
Q ss_pred ccccCccccccCCcchhhHHHHHHhCCCC---CCCccchHHHHHHHHhCCCEEE
Q 044519 256 GSSTCQFFGFNGTAGVWRIQAIEDAGGWK---DRTTVEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 256 ~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~---~~~~~ED~~l~~rl~~~G~ki~ 306 (534)
........++|.+.++.+++++.+.... ...-.||..++.-+.+.|.+..
T Consensus 140 -~~~~yP~y~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~ 192 (195)
T PF01762_consen 140 -PDDYYPPYCSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPI 192 (195)
T ss_pred -ccccCCCcCCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCcc
Confidence 0111223357999999999998864322 2233799999999998887654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane |
| >TIGR03584 PseF pseudaminic acid CMP-transferase | Back alignment and domain information |
|---|
Probab=94.00 E-value=1.6 Score=41.17 Aligned_cols=159 Identities=17% Similarity=0.128 Sum_probs=83.5
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC----CCCCChh
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN----RNGYKAG 176 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~----~~g~Ka~ 176 (534)
+....+..+++++++....+ + |+|..| |+... +.++++ +..+.+. |+. ..-+...
T Consensus 22 ~GkpLi~~ti~~a~~s~~~d-~--IvVstd--~~~i~------------~~a~~~---g~~v~~~-r~~~l~~d~~~~~~ 80 (222)
T TIGR03584 22 CGKPMIAYSIEAALNSGLFD-K--VVVSTD--DEEIA------------EVAKSY---GASVPFL-RPKELADDFTGTAP 80 (222)
T ss_pred CCcCHHHHHHHHHHhCCCCC-E--EEEeCC--CHHHH------------HHHHHc---CCEeEEe-ChHHHcCCCCCchH
Confidence 44568899999998866432 2 334333 22222 222222 3444333 322 1224667
Q ss_pred HHHHHHHhhhc-cCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEeeeeEee-cCCCchhhHh-Hhhhcccchhhh
Q 044519 177 ALKEGLEKQYV-KDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQARWKFV-NADECLMTRL-QEMSLDYHFSVE 252 (534)
Q Consensus 177 aln~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~-n~~~~~~~~~-~~~~~~~~~~~~ 252 (534)
++..|++.... .+.|.++++++|.-+ +++.+.+++..+.+ .+.+.+.+..... ++..++ .. ..-.........
T Consensus 81 si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~-~~~ds~~sv~~~~~~~~~~~--~~~~~g~~~~~~~~~ 157 (222)
T TIGR03584 81 VVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ-PNAHFVFSVTSFAFPIQRAF--KLKENGGVEMFFPEH 157 (222)
T ss_pred HHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh-CCCCEEEEeeccCCChHHhe--EECCCCcEEecCCCc
Confidence 78888876411 247999999999766 99999999999854 3344443332211 110000 00 000000001000
Q ss_pred h-hcccccCccccccCCcchhhHHHHHHhCCC
Q 044519 253 Q-EVGSSTCQFFGFNGTAGVWRIQAIEDAGGW 283 (534)
Q Consensus 253 ~-~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~ 283 (534)
. ..+......+..+|+..+++++.+.+-+.+
T Consensus 158 ~~~~rQd~~~~y~~nga~y~~~~~~~~~~~~~ 189 (222)
T TIGR03584 158 FNTRSQDLEEAYHDAGQFYWGKSQAWLESGPI 189 (222)
T ss_pred ccCCCCCCchheeeCCeEEEEEHHHHHhcCCc
Confidence 0 011223334456899999999999876544
|
The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. |
| >PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.073 Score=45.20 Aligned_cols=77 Identities=16% Similarity=0.273 Sum_probs=49.1
Q ss_pred CCcEEEEEeccCchHHHHHHHHHH----HcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAA----CGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl----~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
.-+|+|+||-+|.++.+...+..+ .+|.- ...|+|+..+.+....
T Consensus 46 ~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~---~y~I~vieQ~~~~~FN---------------------------- 94 (136)
T PF13733_consen 46 RHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQL---DYRIFVIEQVDNGPFN---------------------------- 94 (136)
T ss_dssp S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT----EEEEEEEEE-SSS-------------------------------
T ss_pred ccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcc---eEEEEEEeeccCCCCc----------------------------
Confidence 348999999999998888877765 23442 3556666554332211
Q ss_pred EecCCCCCChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHH
Q 044519 166 TRKNRNGYKAGALKEGLEKQYV-KDCQFVVIFDADFQPDED 205 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd 205 (534)
|+.-+|.|+..|.. .+.|.+++-|.|.+|..|
T Consensus 95 --------Rg~L~NvGf~eA~~~~~~dc~ifHDVDllP~~~ 127 (136)
T PF13733_consen 95 --------RGKLMNVGFLEALKDDDFDCFIFHDVDLLPEND 127 (136)
T ss_dssp --------HHHHHHHHHHHHHHHS--SEEEEE-TTEEESBT
T ss_pred --------hhhhhhHHHHHHhhccCCCEEEEecccccccCC
Confidence 66678888887744 368999999999998654
|
... |
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
Probab=93.64 E-value=6.8 Score=38.68 Aligned_cols=184 Identities=13% Similarity=0.049 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe-cCCCCCChhHHHHH
Q 044519 103 KEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR-KNRNGYKAGALKEG 181 (534)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r-~~~~g~Ka~aln~g 181 (534)
...+...++.+.+... .+. |+|..+ ++.+. +.+++ .+ +.++.+ +...+|-.++ ..|
T Consensus 72 kPLL~~vi~~a~~~~~-~~~--VVV~~~--~e~I~------------~~~~~---~~--v~vi~~~~~~~~GT~~~-~~a 128 (293)
T PLN02917 72 KPMIQRTWERAKLATT-LDH--IVVATD--DERIA------------ECCRG---FG--ADVIMTSESCRNGTERC-NEA 128 (293)
T ss_pred EEHHHHHHHHHHcCCC-CCE--EEEECC--hHHHH------------HHHHH---cC--CEEEeCCcccCCchHHH-HHH
Confidence 3478888888876542 222 334433 22222 22222 12 333322 2334454444 567
Q ss_pred HHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH---h--hhcccch-h-h-h
Q 044519 182 LEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ---E--MSLDYHF-S-V-E 252 (534)
Q Consensus 182 l~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~---~--~~~~~~~-~-~-~ 252 (534)
++.. ..+.|+++++++|.- .+++.+.+++..+.++++..+.+........+..-..+.. . -..-++. . + +
T Consensus 129 ~~~l-~~~~d~Vlil~gD~PlI~~~tI~~li~~~~~~~~~iv~t~~~~~~~~~~~~ygrv~vv~~~~g~alyfsr~~Ipe 207 (293)
T PLN02917 129 LKKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDASDPNRVKCVVDNQGYAIYFSRGLIPY 207 (293)
T ss_pred HHhc-cCCCCEEEEecCCcCCCCHHHHHHHHHHHHhcCCceEEEEeeecCHHHhcCCCceEEEECCCCeEEEeecCcCCc
Confidence 6654 224789999999966 5999999999988555544443332211111111111110 0 0000000 0 1 1
Q ss_pred hhc-ccccCccccccCCcchhhHHHHHHhCCCCCCCc-cchHHHHHHHHhCCCEEEEecc
Q 044519 253 QEV-GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT-VEDMDLAVRASLKGWKFVFVGD 310 (534)
Q Consensus 253 ~~~-~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~-~ED~~l~~rl~~~G~ki~~~~~ 310 (534)
..- ........-.+....+||++.+.....++.+.. .|-.-.-.++.++|+++..++.
T Consensus 208 ~kd~~~~~~~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl~~le~G~~i~~~~~ 267 (293)
T PLN02917 208 NKSGKVNPQFPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQLKVLENGYKMKVIKV 267 (293)
T ss_pred CCCcccccccceEEEEEEEEeCHHHHHHHHcCCCCcccchhccHHHHHHhCCCceEEEEe
Confidence 110 000111122356678999999998776766544 2222222257799999877653
|
|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.64 Score=42.07 Aligned_cols=93 Identities=24% Similarity=0.245 Sum_probs=57.8
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+.. .+++.| |.++. +.... +... ...+.++..+....|-..++..
T Consensus 24 ~g~~li~~~i~~l~~~~--~~~i~v-v~~~~-~~~~~------------~~~~-----~~~~~~~~~~~~~~G~~~~i~~ 82 (186)
T cd04182 24 DGKPLLRHALDAALAAG--LSRVIV-VLGAE-ADAVR------------AALA-----GLPVVVVINPDWEEGMSSSLAA 82 (186)
T ss_pred CCeeHHHHHHHHHHhCC--CCcEEE-ECCCc-HHHHH------------HHhc-----CCCeEEEeCCChhhCHHHHHHH
Confidence 44578899999887752 234433 43332 22111 1111 2234444333333457788899
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
|++.+. .+.|+++++++|. .++++.++++++.+.
T Consensus 83 al~~~~-~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (186)
T cd04182 83 GLEALP-ADADAVLILLADQPLVTAETLRALIDAFR 117 (186)
T ss_pred HHHhcc-ccCCEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 998761 1379999999998 569999999998874
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
Probab=93.11 E-value=4.3 Score=38.75 Aligned_cols=187 Identities=21% Similarity=0.168 Sum_probs=91.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. +....+..+++.+.+.. -++++| +.|+ +... +.++++ +.++. .......||..
T Consensus 19 ~~l-~GkPli~~~le~~~~~~--~d~VvV-vt~~---~~i~------------~~~~~~---g~~~v-~~~~~~~~Gt~- 74 (238)
T TIGR00466 19 EDI-FGKPMIVHVAENANESG--ADRCIV-ATDD---ESVA------------QTCQKF---GIEVC-MTSKHHNSGTE- 74 (238)
T ss_pred ccc-CCcCHHHHHHHHHHhCC--CCeEEE-EeCH---HHHH------------HHHHHc---CCEEE-EeCCCCCChhH-
Confidence 444 34567888999887643 344433 4442 2122 222221 33322 22223344433
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----CchhhHhHh-hhcccchh
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNAD----ECLMTRLQE-MSLDYHFS 250 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~~~~~~~~-~~~~~~~~ 250 (534)
....+++.....+.|+++++|+|.= ++|+.+.++++.+ .+++.+++.......+.. .+-...... -.....+.
T Consensus 75 r~~~~~~~l~~~~~d~Vli~~gD~Pli~~~~I~~li~~~-~~~~~~~a~~~~~~~d~~~~~~p~~vk~v~~~~g~alyfs 153 (238)
T TIGR00466 75 RLAEVVEKLALKDDERIVNLQGDEPFIPKEIIRQVADNL-ATKNVPMAALAVKIHDAEEAFNPNAVKVVLDSQGYALYFS 153 (238)
T ss_pred HHHHHHHHhCCCCCCEEEEEcCCcCcCCHHHHHHHHHHH-hcCCCCEEEEeeecCCHHHccCCCceEEEeCCCCeEEEec
Confidence 2333433221125689999999965 5999999999988 343344333332222200 000000000 00000000
Q ss_pred hhh--hccccc------Cc-cccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEec
Q 044519 251 VEQ--EVGSST------CQ-FFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 251 ~~~--~~~~~~------~~-~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 309 (534)
... ..+... .. ....+=+-.+||++++++.-.++...+ .|+.| .+|+..+|+++....
T Consensus 154 r~~ip~~R~~~~~~~tpq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le~~e~le-qlr~le~g~~i~~~~ 222 (238)
T TIGR00466 154 RSLIPFDRDFFAKRQTPVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLEEIEKLE-QLRVLYYGEKIHVKI 222 (238)
T ss_pred CCCCCCCCCcccccccccccceeEEEEEEeCCHHHHHHHHhCCCCcccccchhH-HHhhhhcCCceEEEE
Confidence 000 000000 00 001122356899999999877776544 67777 468889999997755
|
|
| >PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.2 Score=48.12 Aligned_cols=103 Identities=19% Similarity=0.159 Sum_probs=59.0
Q ss_pred EEEEec-cCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 94 LVQIPM-YNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 94 sViIP~-yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
||+|-+ |+..+.+.+.|+++.+..+-+ +++| |=.+ ..+... . .++...+..++++..+ ++
T Consensus 2 Tvvi~t~~~R~~~L~~~l~~l~~~~~l~-~IvV-vWn~-~~~~P~---------~-----~~~~~~~vpV~~~~~~-~n- 62 (247)
T PF09258_consen 2 TVVINTSYKRSDLLKRLLRHLASSPSLR-KIVV-VWNN-PNPPPP---------S-----SKWPSTGVPVRVVRSS-RN- 62 (247)
T ss_dssp EEEEEE-SS-HHHHHHHHHHHTTSTTEE-EEEE-EEE--TS--TH---------H-----HHHT---S-EEEEEES-SH-
T ss_pred EEEEEecccchHHHHHHHHHHHcCCCCC-eEEE-EeCC-CCCCCc---------c-----cccCCCCceEEEEecC-Cc-
Confidence 788888 999999999999996665432 2222 3243 222111 1 2233445777777432 21
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCc
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKE 219 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~ 219 (534)
.-.++-.-.... +.|-|+.+|+|..++++.|+.......++|+
T Consensus 63 -sLnnRF~p~~~i---~T~AVl~~DDDv~~~~~~l~faF~~W~~~pd 105 (247)
T PF09258_consen 63 -SLNNRFLPDPEI---ETDAVLSLDDDVMLSCDELEFAFQVWREFPD 105 (247)
T ss_dssp -HGGGGGS--TT-----SSEEEEEETTEEE-HHHHHHHHHHHCCSTT
T ss_pred -cHHhcCcCcccc---CcceEEEecCCcccCHHHHHHHHHHHHhChh
Confidence 111222222344 8999999999999999999999888877775
|
They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B. |
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
Probab=92.54 E-value=1 Score=40.92 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=60.3
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. +....+..+++++.+.. .++++| |+++..++ ..+..++ ..++.++.......|-..
T Consensus 20 l~~-~g~pll~~~i~~l~~~~--~~~iiv-v~~~~~~~------------~~~~~~~-----~~~v~~v~~~~~~~g~~~ 78 (188)
T TIGR03310 20 LPY-KGKTILEHVVDNALRLF--FDEVIL-VLGHEADE------------LVALLAN-----HSNITLVHNPQYAEGQSS 78 (188)
T ss_pred ccc-CCeeHHHHHHHHHHHcC--CCcEEE-EeCCcHHH------------HHHHhcc-----CCCeEEEECcChhcCHHH
Confidence 344 44678888998887654 234433 44443221 2212211 234555544333334667
Q ss_pred HHHHHHH-hhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc
Q 044519 177 ALKEGLE-KQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE 219 (534)
Q Consensus 177 aln~gl~-~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~ 219 (534)
++..|++ .. +.|.++++++|. .++++.++++++.+..+++
T Consensus 79 si~~~l~~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 120 (188)
T TIGR03310 79 SIKLGLELPV---QSDGYLFLLGDQPFVTPDIIQLLLEAFALKND 120 (188)
T ss_pred HHHHHhcCCC---CCCEEEEEeCCcCCCCHHHHHHHHHHHHhCCC
Confidence 7788877 33 678999999997 5699999999987744444
|
Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate. |
| >KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.22 Score=49.66 Aligned_cols=109 Identities=18% Similarity=0.106 Sum_probs=70.9
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|.|-|.+-.+|-...+.--+..+-++|||+.+.-|++- |-+.|.+++ ..++..+........|.+....+
T Consensus 3 ptvl~alL~rn~ah~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie---------~freWL~nv~~~y~~V~~e~~~e 73 (568)
T KOG4179|consen 3 PTVLCALLFRNFAHSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIE---------YFREWLENVGDLYHRVKWEPFIE 73 (568)
T ss_pred ceeehHHHHHHHHhhhhhccCChhccCCcccccceEEecCccccchHH---------HHHHHHHhcCCccceeEEEecCC
Confidence 55666666777777777777777889999988777665 558888887 66555555433444555543221
Q ss_pred C------CCC--------------ChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHH
Q 044519 170 R------NGY--------------KAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIP 212 (534)
Q Consensus 170 ~------~g~--------------Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~ 212 (534)
+ .|. |-.|+|.|=+ .-.||+++.|.|+.+ .+|.|.-+++
T Consensus 74 ~~s~~d~~~pk~W~~sr~q~lm~lKeea~~~~r~----~~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 74 PKSYPDEHGPKHWPDSRFQHLMSLKEEALNWARS----GWADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred ccccCcccCCccCchHHHHHHHHHHHHHHHHHHh----hhcceeEEeehhheeeCCchHhHHHh
Confidence 1 121 2333444332 367999999999988 7887776654
|
|
| >COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.78 E-value=11 Score=35.12 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=80.6
Q ss_pred CccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchh
Q 044519 159 GVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLM 237 (534)
Q Consensus 159 ~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~ 237 (534)
|..+..- +.+...|- .-+..+++.....+.|+|+-+-.|. ..+|.-+.++++.+ ++.++++++......+..+-+-
T Consensus 63 G~~avmT-~~~h~SGT-dR~~Ev~~~l~~~~~~iIVNvQGDeP~i~p~~I~~~~~~L-~~~~~~~aTl~~~i~~~ee~~n 139 (247)
T COG1212 63 GGEAVMT-SKDHQSGT-DRLAEVVEKLGLPDDEIIVNVQGDEPFIEPEVIRAVAENL-ENSNADMATLAVKITDEEEAFN 139 (247)
T ss_pred CCEEEec-CCCCCCcc-HHHHHHHHhcCCCcceEEEEccCCCCCCCHHHHHHHHHHH-HhCCcceeeeeeecCCHHHhcC
Confidence 4444333 44333333 3355555554345778999999994 44999999999999 4558888877766544322110
Q ss_pred hHhH----h-hhcccchhhhhh--cccccCccccc--cCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEE
Q 044519 238 TRLQ----E-MSLDYHFSVEQE--VGSSTCQFFGF--NGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 238 ~~~~----~-~~~~~~~~~~~~--~~~~~~~~~~~--~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~ 306 (534)
...- . -.+...|...-. .+.. .+...+ .=.-..||+.++++...|.+..+ .|+.| -.|+..+|.|+.
T Consensus 140 PN~VKvV~d~~g~ALYFSRs~iP~~rd~-~~~~p~l~HIGIYayr~~~L~~f~~~~ps~LE~~E~LE-QLR~Le~G~kI~ 217 (247)
T COG1212 140 PNVVKVVLDKEGYALYFSRAPIPYGRDN-FGGTPFLRHIGIYAYRAGFLERFVALKPSPLEKIESLE-QLRVLENGEKIH 217 (247)
T ss_pred CCcEEEEEcCCCcEEEEEcCCCCCcccc-cCCcchhheeehHHhHHHHHHHHHhcCCchhHHHHHHH-HHHHHHcCCeeE
Confidence 0000 0 001111111000 0000 000111 12246799999999988987554 45555 467778999986
Q ss_pred Eec
Q 044519 307 FVG 309 (534)
Q Consensus 307 ~~~ 309 (534)
..-
T Consensus 218 v~i 220 (247)
T COG1212 218 VEI 220 (247)
T ss_pred EEE
Confidence 653
|
|
| >PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.31 Score=47.03 Aligned_cols=109 Identities=14% Similarity=0.067 Sum_probs=56.8
Q ss_pred cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccC
Q 044519 188 KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNG 267 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 267 (534)
.+.+|.++.|+|+.+..+-|.+++..+ ||+-...-|.......... ..+.... .....+..+.-.|
T Consensus 85 ~~~~Wf~~~DDDtyv~~~~L~~~L~~~--~~~~~~yiG~~~~~~~~~~-~~~~~~~-----------~~~~~~~~f~~GG 150 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVNVENLRRLLSKY--DPSEPIYIGRPSGDRPIEI-IHRFNPN-----------KSKDSGFWFATGG 150 (252)
T ss_dssp HT-SEEEEEETTEEE-HHHHHHHHTTS---TTS--EEE-EE----------------------------------EE-GG
T ss_pred CCceEEEEEeCCceecHHHHHHHHhhC--CCccCEEeeeeccCcccee-ecccccc-----------ccCcCceEeeCCC
Confidence 377999999999999999999999987 4444444444332211110 0000000 0011122233468
Q ss_pred CcchhhHHHHHHhC------CCCC----CCccchHHHHHHHHh-CCCEEEEecc
Q 044519 268 TAGVWRIQAIEDAG------GWKD----RTTVEDMDLAVRASL-KGWKFVFVGD 310 (534)
Q Consensus 268 ~~~~~Rr~~l~~~G------g~~~----~~~~ED~~l~~rl~~-~G~ki~~~~~ 310 (534)
++.+++|.+++++. .+.. ....||+.+++-+.. .|.+....+.
T Consensus 151 aG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~ 204 (252)
T PF02434_consen 151 AGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPL 204 (252)
T ss_dssp G-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT
T ss_pred eeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechh
Confidence 99999999999872 2222 134799999999988 9998877765
|
It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A. |
| >PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ] | Back alignment and domain information |
|---|
Probab=90.92 E-value=4.8 Score=38.35 Aligned_cols=121 Identities=14% Similarity=0.116 Sum_probs=71.5
Q ss_pred EEEEeccCchHHHHHHHH-HHHcC--CCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 94 LVQIPMYNEKEVYKLSIG-AACGL--SWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~-sl~~q--~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
-|..-.||.++.+..... ++++. ...++.+-|-|. .||+|.|.+ .++.+...+...+.+-.+...+.
T Consensus 3 fIA~~l~~~~~iL~~~~~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~---------~L~~L~~~L~~lgv~~~i~~~~~ 73 (241)
T PF11735_consen 3 FIAANLYNNEDILPSLWGDALLELIRFLGPENVFVSIYESGSWDGTKE---------ALRALDAELDALGVPHSIVLSDI 73 (241)
T ss_pred EEEEEcccCHhHHHHHHHHHHHHHHHHhCcCeEEEEEEeCCCCccHHH---------HHHHHHHHHHhCCCCeEEEeCCC
Confidence 344456777777776655 55441 222344544444 568898887 77766666656666655543221
Q ss_pred CCC-------------CChhHHHHHHHhhh------ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEee
Q 044519 170 RNG-------------YKAGALKEGLEKQY------VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQA 225 (534)
Q Consensus 170 ~~g-------------~Ka~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~ 225 (534)
... .-|.-+|.+++-.. ..+.|-|++++ |....++-+.+++..- +..+.+++++
T Consensus 74 ~~~~~~~~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~-~~~~~~~aCa 146 (241)
T PF11735_consen 74 THRDEIERPPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTR-NRGNYDMACA 146 (241)
T ss_pred cccccccccchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhc-Ccccccchhh
Confidence 111 12455677776432 13567899999 8788777777776664 2245566655
|
It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor. |
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
Probab=89.74 E-value=4.6 Score=37.90 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=60.7
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.-+ ...+..+++++.+.. -.++.| |+... ++... +... ..++.++.++.. .|.++
T Consensus 21 ~~v~g-kpli~~~i~~l~~~~--i~~i~i-v~~~~-~~~i~------------~~~~-----~~~~~~~~~~~~-~g~~~ 77 (229)
T cd02540 21 HPLAG-KPMLEHVLDAARALG--PDRIVV-VVGHG-AEQVK------------KALA-----NPNVEFVLQEEQ-LGTGH 77 (229)
T ss_pred ceeCC-ccHHHHHHHHHHhCC--CCeEEE-EECCC-HHHHH------------HHhC-----CCCcEEEECCCC-CCCHH
Confidence 45545 478899999998754 234444 33221 22222 2222 134555544433 45889
Q ss_pred HHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
++..|++.. ..+.|.++++++|. ..+++.+.++++.+.+
T Consensus 78 ai~~a~~~~-~~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 78 AVKQALPAL-KDFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred HHHHHHHhh-ccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 999998875 11268999999998 5688999999887744
|
The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively. |
| >cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis | Back alignment and domain information |
|---|
Probab=89.43 E-value=5.2 Score=37.38 Aligned_cols=103 Identities=17% Similarity=0.048 Sum_probs=59.3
Q ss_pred CcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 91 PMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 91 P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
|.|-++-|+|.... .+.+.-..+.-- |+ +.=+|++|+...+.. +.+..++ -|..-+++..
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~--l~WIVVEd~~~~t~~----------va~lL~~---sgl~y~HL~~ 63 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRLV--PP--LHWIVVEDSEEKTPL----------VAELLRR---SGLMYTHLNA 63 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhcC--Cc--eEEEEEeCCCCCCHH----------HHHHHHH---cCCceEEecc
Confidence 57889999999873 444444444433 33 444466665433322 2222222 2454455433
Q ss_pred cCC---CCC---ChhHHHHHHHhhhcc----CCcEEEEecCCCCCCHHHHHHH
Q 044519 168 KNR---NGY---KAGALKEGLEKQYVK----DCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 168 ~~~---~g~---Ka~aln~gl~~a~~~----~~d~v~~lDaD~~~~pd~L~~l 210 (534)
+.+ +.. -...+|.|+++.... ..-+|.|.|+|...+-+..+++
T Consensus 64 ~~~~~~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~em 116 (223)
T cd00218 64 KTPSDPTWLKPRGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEM 116 (223)
T ss_pred CCCCCcccCCcccHHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHH
Confidence 222 111 245789999886332 3468889999999998887774
|
Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
| >PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum | Back alignment and domain information |
|---|
Probab=89.16 E-value=5.9 Score=39.03 Aligned_cols=122 Identities=11% Similarity=0.058 Sum_probs=66.6
Q ss_pred CCCcEEEEEeccCch--HHHHHHHHHHHcCCCCCC--ceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 89 SYPMVLVQIPMYNEK--EVYKLSIGAACGLSWPSD--RLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 89 ~~P~VsViIP~yne~--~~l~~~L~sl~~q~yp~~--~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
.-++++|=||+-..+ ..+.+||.|++..--|.+ .+.|+|.=..+|++.... ..+++...+..+... | .+.+
T Consensus 50 ~~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~---~~~~i~~~f~~~i~s-G-~l~V 124 (297)
T PF04666_consen 50 TGKKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPS---VAQNISTRFADHIES-G-LLEV 124 (297)
T ss_pred CCCeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHH---HHHHHHHHhHHHHHh-C-ceEE
Confidence 345699999997765 789999999988666654 344434433334433210 001122222222211 1 2333
Q ss_pred EEecCC----------CCCC---------hhHHH--HHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 165 ETRKNR----------NGYK---------AGALK--EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 165 ~~r~~~----------~g~K---------a~aln--~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
++.+.. +.+- ..++. ..++.+ ...++|.+.+.+|.+..|+|+.++.....+
T Consensus 125 I~~p~~~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~-~~~~~YyL~LEDDVia~~~f~~~i~~~v~~ 196 (297)
T PF04666_consen 125 ISPPPSYYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYC-QNLGDYYLQLEDDVIAAPGFLSRIKRFVEA 196 (297)
T ss_pred EecccccCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHH-HhcCCeEEEecCCeEechhHHHHHHHHHHH
Confidence 322110 0000 00111 222222 247899999999999999999999888743
|
N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane |
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
Probab=89.02 E-value=3.1 Score=37.52 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHH
Q 044519 162 VKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYL 214 (534)
Q Consensus 162 v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~ 214 (534)
+.++..+....|...++..|+++. +.|.++++++|.- ++++.+++++..+
T Consensus 59 ~~~v~~~~~~~G~~~si~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 59 VPVIPDEPPGKGPLAGILAALRAA---PADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CcEeeCCCCCCCCHHHHHHHHHhc---CCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 344433333445788999999987 7899999999984 5999999998877
|
The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target. |
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
Probab=87.67 E-value=4.9 Score=36.75 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=34.2
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
.|-..++..|++.. +.|+++++++|. .++++.+.++++.+.
T Consensus 74 ~g~~~~i~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 74 PGPLAGILAGLKQA---RTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CCCHHHHHHHHHhc---CCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 34667888888876 789999999997 669999999998773
|
|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
Probab=87.43 E-value=8.8 Score=34.96 Aligned_cols=46 Identities=26% Similarity=0.178 Sum_probs=35.0
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK 218 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~ 218 (534)
|...++..|++++...+.|+++++++|.-. +++.+.+++..+.+.+
T Consensus 79 G~~~si~~gl~~~~~~~~d~vlv~~~D~P~v~~~~i~~L~~~~~~~~ 125 (190)
T TIGR03202 79 GQAHSLKCGLRKAEAMGADAVVILLADQPFLTADVINALLALAKRRP 125 (190)
T ss_pred hHHHHHHHHHHHhccCCCCeEEEEeCCCCCCCHHHHHHHHHHHhhCC
Confidence 466788888887522357999999999554 9999999998874333
|
In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental. |
| >PLN03153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.98 E-value=3.2 Score=43.51 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=62.0
Q ss_pred cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccC
Q 044519 188 KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNG 267 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 267 (534)
.+.++++++|+|+.+.++-|.+.+..+ +..+--.++......+.+ .. .+..+.++|
T Consensus 209 pd~kWfVf~DDDTyf~~~NLv~~Ls~Y-Dptkp~YIGs~Se~~~qn-------------~~----------f~~~fA~GG 264 (537)
T PLN03153 209 PDVRWFVLGDDDTIFNADNLVAVLSKY-DPSEMVYVGGPSESHSAN-------------SY----------FSHNMAFGG 264 (537)
T ss_pred CCCCEEEEecCCccccHHHHHHHHhhc-CCCCCEEecccccccccc-------------cc----------cccccccCC
Confidence 578999999999999888888888776 222222333222111100 00 011234579
Q ss_pred CcchhhHHHHHHhCC--------CCCCCccchHHHHHHHHhCCCEEEEeccC
Q 044519 268 TAGVWRIQAIEDAGG--------WKDRTTVEDMDLAVRASLKGWKFVFVGDL 311 (534)
Q Consensus 268 ~~~~~Rr~~l~~~Gg--------~~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 311 (534)
++.++.+.+++.+.. ++ ...++|..++.-+.+.|-+....+.-
T Consensus 265 AG~~LSrPLae~L~~~~d~C~~rY~-~~~~gD~rL~~CL~elGV~LT~~~gf 315 (537)
T PLN03153 265 GGIAISYPLAEALSRILDDCLDRYP-KLYGSDDRLHACITELGVPLSREPGF 315 (537)
T ss_pred ceEEEcHHHHHHHHHHhhhhhhhcc-cCCCcHHHHHHHHHHcCCCceecCCc
Confidence 999999966555322 22 23578999999999999777666653
|
|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
Probab=85.69 E-value=4 Score=35.92 Aligned_cols=102 Identities=15% Similarity=0.196 Sum_probs=64.0
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. ++...++.+++.+.+... ++++| +..+ ++ .. +.+ . ..++.++..+....|-..
T Consensus 19 ~~i-~g~~li~~~l~~l~~~~~--~~Ivv-v~~~--~~-~~--------~~~----~-----~~~~~~v~~~~~~~G~~~ 74 (160)
T PF12804_consen 19 LPI-GGKPLIERVLEALREAGV--DDIVV-VTGE--EE-IY--------EYL----E-----RYGIKVVVDPEPGQGPLA 74 (160)
T ss_dssp SEE-TTEEHHHHHHHHHHHHTE--SEEEE-EEST--HH-HH--------HHH----T-----TTTSEEEE-STSSCSHHH
T ss_pred eeE-CCccHHHHHHHHhhccCC--ceEEE-ecCh--HH-HH--------HHH----h-----ccCceEEEeccccCChHH
Confidence 455 666788899988877642 33332 3333 22 22 111 1 234666644444566888
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCC-cEEEEe
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENK-ELGLVQ 224 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~-~v~~V~ 224 (534)
++..|++.. .+.+.++++.+|.. ++++.+.+++..+.+++ ++.++.
T Consensus 75 sl~~a~~~~--~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~ 122 (160)
T PF12804_consen 75 SLLAALSQL--PSSEPVLVLPCDQPFLSPELLRRLLEALEKSPADIVVPV 122 (160)
T ss_dssp HHHHHHHTS--TTSSEEEEEETTETTS-HHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHhc--ccCCCcEEEeCCccccCHHHHHHHHHHHhccCCcEEEEE
Confidence 888888864 37899999999984 59999999999985433 444333
|
... |
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
Probab=85.14 E-value=8.7 Score=35.54 Aligned_cols=96 Identities=17% Similarity=0.199 Sum_probs=57.5
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|..| ...+..+++++.+... .++.| +++...+ ... +...+....+.++.++..+.. .|-++
T Consensus 24 l~v~g-~pli~~~l~~l~~~g~--~~i~v-v~~~~~~-~i~------------~~~~~~~~~~~~i~~~~~~~~-~g~~~ 85 (217)
T cd04181 24 LPIAG-KPILEYIIERLARAGI--DEIIL-VVGYLGE-QIE------------EYFGDGSKFGVNIEYVVQEEP-LGTAG 85 (217)
T ss_pred cEECC-eeHHHHHHHHHHHCCC--CEEEE-EeccCHH-HHH------------HHHcChhhcCceEEEEeCCCC-CccHH
Confidence 44444 4789999999988652 34433 4443322 222 222211112345656543333 45788
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++..+.+.. +.+.++++++|.+.+.+. .+++...
T Consensus 86 al~~~~~~~---~~~~~lv~~~D~~~~~~~-~~~~~~~ 119 (217)
T cd04181 86 AVRNAEDFL---GDDDFLVVNGDVLTDLDL-SELLRFH 119 (217)
T ss_pred HHHHhhhhc---CCCCEEEEECCeecCcCH-HHHHHHH
Confidence 999988876 688999999999888774 4444544
|
Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. |
| >PLN03180 reversibly glycosylated polypeptide; Provisional | Back alignment and domain information |
|---|
Probab=85.00 E-value=2.1 Score=42.16 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=27.3
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHH-------HHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDED-------FLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd-------~L~~lv~~~ 214 (534)
.+|.|+-.+ +.+|++.+|+|+.|..| ++.+-+..+
T Consensus 84 ~R~fGyL~s---~~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~NL 125 (346)
T PLN03180 84 CRCFGYLVS---KKKYIFTIDDDCFVAKDPSGKLINALEQHIKNL 125 (346)
T ss_pred chhhhheee---cceEEEEECCCCCCCCCCccccccHHHHHHHhc
Confidence 468888777 89999999999999776 666554433
|
|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
Probab=84.84 E-value=8.2 Score=36.08 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=57.3
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
.+|.-+. ..+...++++.+.... ++ + |+-+...+... +...+ ...+.++.+.......-|-+
T Consensus 24 llpi~g~-~li~~~l~~l~~~gi~--~i-~-iv~~~~~~~i~------------~~~~~-~~~~~~i~~~~~~~~~~g~~ 85 (221)
T cd06422 24 LVPVAGK-PLIDHALDRLAAAGIR--RI-V-VNTHHLADQIE------------AHLGD-SRFGLRITISDEPDELLETG 85 (221)
T ss_pred eeeECCE-EHHHHHHHHHHHCCCC--EE-E-EEccCCHHHHH------------HHHhc-ccCCceEEEecCCCcccccH
Confidence 4566565 8999999999887543 23 3 33332222222 22221 11244555543221233478
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY 213 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~ 213 (534)
+++..+.+.. +.|.++++++|.+.+.|....+..+
T Consensus 86 ~~l~~~~~~~---~~~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 86 GGIKKALPLL---GDEPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred HHHHHHHHhc---CCCCEEEEeCCeeeCCCHHHHHHHH
Confidence 8899998876 4588999999999988765544333
|
This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. |
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=84.71 E-value=7 Score=43.49 Aligned_cols=180 Identities=14% Similarity=0.152 Sum_probs=99.0
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHH--HHHHHHHHhc-----------------CCcEEEEeeeeEeecC
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDF--LWRTIPYLLE-----------------NKELGLVQARWKFVNA 232 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~--L~~lv~~~~~-----------------~~~v~~V~~~~~~~n~ 232 (534)
||..|-|.++--. +||++-.+|+.- -.-.++ ++.++..|++ .+.+.+++.+-.....
T Consensus 275 GK~eNQNhaiiF~---rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~ 351 (817)
T PF02364_consen 275 GKPENQNHAIIFT---RGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSE 351 (817)
T ss_pred CCccccceeEEEE---ccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecC
Confidence 7999999999887 999999999872 112222 2345666643 1345666665544443
Q ss_pred CCchhhH---hHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC----CCccchHHHHHHHHhCCCEE
Q 044519 233 DECLMTR---LQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD----RTTVEDMDLAVRASLKGWKF 305 (534)
Q Consensus 233 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~----~~~~ED~~l~~rl~~~G~ki 305 (534)
+.+-+.. .|+..+. ...|+.-...+.- .-=|.-=++.|-....-||.+. -++.||..-++....+|.++
T Consensus 352 ~vg~L~~~aa~qE~~F~---Tl~qR~la~p~~r-lHYGHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i 427 (817)
T PF02364_consen 352 NVGSLGDFAAGQEQSFG---TLFQRTLANPLVR-LHYGHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRI 427 (817)
T ss_pred CcchHHHHhhhhhHHHH---HHHHHHHhcchhh-ccCCCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCce
Confidence 3332222 2221111 1111111011100 0014444555555555566654 35799999999999999999
Q ss_pred EEeccCcccccCCcCHHHHHHHHhhhccchh-hHHhhhhhhhh-hcCCCChhHHHHHHH
Q 044519 306 VFVGDLGVKNELPSTFKAYRYQQHRWSCGPS-NLFSKMTREII-LCERVSVWKRLYLIY 362 (534)
Q Consensus 306 ~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 362 (534)
.++.-..|-----..+.+...=...-+.|+- |.+.+ ... ...++++.+.+.+.+
T Consensus 428 ~h~ey~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSR---e~yrLg~~ld~~R~LSfyy 483 (817)
T PF02364_consen 428 KHCEYIQCGKGRDVGFNSILNFETKIASGMGEQMLSR---EYYRLGTRLDFFRFLSFYY 483 (817)
T ss_pred eehhhhhcccccccCchhhhhhHhHhcCCccchhhhH---HHHHhhccCCHHHHHHHHh
Confidence 9988766522222344444444455567776 44332 222 235677777776543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane |
| >TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial | Back alignment and domain information |
|---|
Probab=84.70 E-value=8.5 Score=34.81 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
.|-.+++..|+++. +.|.++++++|. .++++.+++++..+.
T Consensus 73 ~g~~~si~~al~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 114 (186)
T TIGR02665 73 PGPLAGILAGLRWA---GTDWVLTVPCDTPFLPEDLVARLAAALE 114 (186)
T ss_pred CCCHHHHHHHHHhc---CCCeEEEEecCCCcCCHHHHHHHHHHhh
Confidence 45788899999887 789999999997 679999999999874
|
In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family. |
| >KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=83.67 E-value=14 Score=36.09 Aligned_cols=101 Identities=21% Similarity=0.172 Sum_probs=62.2
Q ss_pred CCcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEE-cC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 90 YPMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVL-DD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 90 ~P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~-Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
.|.|-|+-|+|+... .+.+.-..+. + -|+ +.=+|+ |+ +..+.+. .+++ ..|..-+|
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~-~-V~n--LhWIVVEd~~~~~p~v~--------~~L~-------rtgl~yth 146 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLR-L-VPN--LHWIVVEDGEGTTPEVS--------GILR-------RTGLPYTH 146 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHh-h-cCC--eeEEEEecCCCCCHHHH--------HHHH-------HcCCceEE
Confidence 688999999999973 3333333332 2 233 333345 44 3333333 2333 23666667
Q ss_pred EEecCCCCCC----hhHHHHHHHhhh-----c-cCCcEEEEecCCCCCCHHHHHH
Q 044519 165 ETRKNRNGYK----AGALKEGLEKQY-----V-KDCQFVVIFDADFQPDEDFLWR 209 (534)
Q Consensus 165 ~~r~~~~g~K----a~aln~gl~~a~-----~-~~~d~v~~lDaD~~~~pd~L~~ 209 (534)
+..+.+.++| -..+|.|++... . +..-+|.|-|+|...+-+...+
T Consensus 147 l~~~t~~~~~~~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e 201 (330)
T KOG1476|consen 147 LVHKTPMGYKARRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE 201 (330)
T ss_pred EeccCCCCCccccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH
Confidence 7666666767 458899998763 1 2345778889999988887777
|
|
| >KOG3917 consensus Beta-1,4-galactosyltransferase B4GALT7/SQV-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.34 E-value=3.2 Score=38.18 Aligned_cols=151 Identities=14% Similarity=0.218 Sum_probs=88.2
Q ss_pred cCCCCcEEEEEeccCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccE
Q 044519 87 NKSYPMVLVQIPMYNEKEVYKLSIGAAC----GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNV 162 (534)
Q Consensus 87 ~~~~P~VsViIP~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v 162 (534)
+..+.+.+|++|-++.-+.+.+-+..+. +|.-. -.|+|.+.- |+ .
T Consensus 70 ~aS~HklavlVPfRdRfEELl~FvPHM~~FL~rq~v~---HHI~vlNQv-D~---------------------------f 118 (310)
T KOG3917|consen 70 GASYHKLAVLVPFRDRFEELLEFVPHMSKFLHRQNVS---HHILVLNQV-DP---------------------------F 118 (310)
T ss_pred CccceeEEEEechHHHHHHHHHhhHHHHHHHhhcCcc---eEEEEeecc-Cc---------------------------c
Confidence 3567889999998877666655554442 34432 345455431 11 0
Q ss_pred EEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 163 KYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 163 ~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
++ ..|.-+|.|+..| ...+||+++-|.|-.|-.+-|.. .-|+. .|+.....+.-
T Consensus 119 RF--------NRAsLINVGf~ea-s~~~DYiaMhDVDLLPlN~el~Y------~fP~~---~gp~HiasP~l-------- 172 (310)
T KOG3917|consen 119 RF--------NRASLINVGFNEA-SRLCDYIAMHDVDLLPLNPELPY------DFPGI---GGPRHIASPQL-------- 172 (310)
T ss_pred ee--------chhhheecchhhh-cchhceeeecccccccCCCCCCC------CCCcc---CCcccccCccc--------
Confidence 00 1444567777776 34589999999998773321110 11221 12211111110
Q ss_pred hhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe
Q 044519 243 MSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~ 308 (534)
......-.+.|.-.+.+++.++...|.+.... -||-|+-.|+..+|....-.
T Consensus 173 --------------HPkYHY~~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqltRp 227 (310)
T KOG3917|consen 173 --------------HPKYHYEKFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLTRP 227 (310)
T ss_pred --------------CchhhhhhhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEecc
Confidence 00111122468889999999999999887544 58999999999999876443
|
|
| >PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
Probab=82.69 E-value=7.2 Score=36.03 Aligned_cols=52 Identities=15% Similarity=0.198 Sum_probs=39.8
Q ss_pred cEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHh
Q 044519 161 NVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLL 215 (534)
Q Consensus 161 ~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~ 215 (534)
++.++.......|-..++..|++.. +.|+++++++|.-. +++.++++++...
T Consensus 67 ~~~~i~~~~~~~G~~~si~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 67 GCHWLREPPPSQGPLVAFAQGLPQI---KTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CCeEecCCCCCCChHHHHHHHHHhC---CCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 3555544444445678899999987 67999999999654 9999999998873
|
|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
Probab=82.43 E-value=15 Score=33.98 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=55.6
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.-|. ..+...++.+.+..- +++.| +.+. .++... +...+....+.++.+. ++....|.++
T Consensus 24 l~i~g~-pli~~~l~~l~~~g~--~~v~v-v~~~-~~~~i~------------~~~~~~~~~~~~~~~~-~~~~~~G~~~ 85 (223)
T cd06915 24 APVAGR-PFLEYLLEYLARQGI--SRIVL-SVGY-LAEQIE------------EYFGDGYRGGIRIYYV-IEPEPLGTGG 85 (223)
T ss_pred cEECCc-chHHHHHHHHHHCCC--CEEEE-Eccc-CHHHHH------------HHHcCccccCceEEEE-ECCCCCcchH
Confidence 444454 678999999887542 23333 4433 222222 1211100012334444 3333445788
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++..+++.. +.|.++++++|...+++ +.+++..+
T Consensus 86 ~l~~a~~~~---~~~~~lv~~~D~~~~~~-~~~~l~~~ 119 (223)
T cd06915 86 AIKNALPKL---PEDQFLVLNGDTYFDVD-LLALLAAL 119 (223)
T ss_pred HHHHHHhhc---CCCCEEEEECCcccCCC-HHHHHHHH
Confidence 888888876 67889999999977665 56677766
|
WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars. |
| >cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule | Back alignment and domain information |
|---|
Probab=81.80 E-value=13 Score=34.90 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=54.3
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|..+. ..++.+|+++.++. ..+++| |. +....... .+++..+.. ..++.+...++...|-+
T Consensus 23 ll~i~g~-pli~~~l~~l~~~g--~~~ivv-v~-~~~~~~~~---------~~~~~~~~~---~~~~~i~~~~~~~~g~~ 85 (231)
T cd04183 23 LIEVDGK-PMIEWVIESLAKIF--DSRFIF-IC-RDEHNTKF---------HLDESLKLL---APNATVVELDGETLGAA 85 (231)
T ss_pred eeEECCE-EHHHHHHHhhhccC--CceEEE-EE-ChHHhhhh---------hHHHHHHHh---CCCCEEEEeCCCCCcHH
Confidence 3566665 78999999998765 233333 44 21111111 222211111 12333332333344577
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY 213 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~ 213 (534)
+++..+.... ...+.++++++|.+.+.+....+..+
T Consensus 86 ~~l~~a~~~l--~~~~~~lv~~~D~i~~~~~~~~~~~~ 121 (231)
T cd04183 86 CTVLLAADLI--DNDDPLLIFNCDQIVESDLLAFLAAF 121 (231)
T ss_pred HHHHHHHhhc--CCCCCEEEEecceeeccCHHHHHHHh
Confidence 8888887764 22477889999999888866544433
|
GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
Probab=81.66 E-value=7 Score=37.18 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=63.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|..|....+...|+.+.+... .++++ |+-+...+ .+++..++....+.++.++..+... |-++
T Consensus 25 l~i~g~~pli~~~l~~l~~~g~--~~ii~-V~~~~~~~------------~i~~~~~~~~~~~~~i~~i~~~~~~-Gta~ 88 (248)
T PF00483_consen 25 LPIGGKYPLIDYVLENLANAGI--KEIIV-VVNGYKEE------------QIEEHLGSGYKFGVKIEYIVQPEPL-GTAG 88 (248)
T ss_dssp SEETTEEEHHHHHHHHHHHTTC--SEEEE-EEETTTHH------------HHHHHHTTSGGGTEEEEEEEESSSS-CHHH
T ss_pred ceecCCCcchhhhhhhhcccCC--ceEEE-EEeecccc------------cccccccccccccccceeeeccccc-chhH
Confidence 6777876789999999988553 23333 44433222 2223333322234567777555444 5899
Q ss_pred HHHHHHHhhhccCCc----EEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 177 ALKEGLEKQYVKDCQ----FVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 177 aln~gl~~a~~~~~d----~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
|+..+.... +.+ .++++.+|.+.+. .+..+++...+
T Consensus 89 al~~a~~~i---~~~~~~~~~lv~~gD~i~~~-~~~~~l~~~~~ 128 (248)
T PF00483_consen 89 ALLQALDFI---EEEDDDEDFLVLNGDIIFDD-DLQDMLEFHRE 128 (248)
T ss_dssp HHHHTHHHH---TTSEE-SEEEEETTEEEEST-THHHHHHHHHH
T ss_pred HHHHHHHHh---hhccccceEEEEeccccccc-hhhhHHHhhhc
Confidence 999998887 444 5999999998887 44556655533
|
; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C .... |
| >cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production | Back alignment and domain information |
|---|
Probab=81.50 E-value=27 Score=32.42 Aligned_cols=103 Identities=19% Similarity=0.164 Sum_probs=58.7
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|. +....++.+++++.+.... +++.| |.++......+ .. .+. .....+.+. .. .. +..
T Consensus 22 l~~i-~Gkpll~~~i~~l~~~~~~-~~ivV-v~~~~~~~~~~------------~~-~~~-~~~~~~~~~-~~-~~-~~~ 81 (218)
T cd02516 22 FLEL-GGKPVLEHTLEAFLAHPAI-DEIVV-VVPPDDIDLAK------------EL-AKY-GLSKVVKIV-EG-GA-TRQ 81 (218)
T ss_pred eeEE-CCeEHHHHHHHHHhcCCCC-CEEEE-EeChhHHHHHH------------HH-Hhc-ccCCCeEEE-CC-ch-HHH
Confidence 3444 4557899999999875432 33333 44432211111 11 111 011233333 21 12 256
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCC
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENK 218 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~ 218 (534)
.++..|+++....+.|.++++++|.- ++++.++++++.+.+++
T Consensus 82 ~si~~al~~~~~~~~~~vlv~~~D~P~i~~~~i~~li~~~~~~~ 125 (218)
T cd02516 82 DSVLNGLKALPDADPDIVLIHDAARPFVSPELIDRLIDALKEYG 125 (218)
T ss_pred HHHHHHHHhcccCCCCEEEEccCcCCCCCHHHHHHHHHHHhhCC
Confidence 77888888641125789999999965 59999999999884443
|
4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs. |
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.39 E-value=18 Score=34.18 Aligned_cols=99 Identities=10% Similarity=0.116 Sum_probs=56.3
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
++...+..+++++.+.... +++.| |+++... . .+++.++++.....++.++ ....+ ...++..
T Consensus 28 ~gkpll~~~i~~~~~~~~~-~~ivV-v~~~~~~---~---------~~~~~~~~~~~~~~~~~~v--~~g~~-r~~sv~~ 90 (230)
T PRK13385 28 VGEPIFIHALRPFLADNRC-SKIII-VTQAQER---K---------HVQDLMKQLNVADQRVEVV--KGGTE-RQESVAA 90 (230)
T ss_pred CCeEHHHHHHHHHHcCCCC-CEEEE-EeChhhH---H---------HHHHHHHhcCcCCCceEEc--CCCch-HHHHHHH
Confidence 4567889999988764322 33333 5544221 1 2222222221111123333 11122 3477788
Q ss_pred HHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC
Q 044519 181 GLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK 218 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~ 218 (534)
|++.. .+.+.++++|+|.=. +++.+.+++..+.+++
T Consensus 91 gl~~~--~~~d~vli~~~d~P~i~~~~i~~li~~~~~~~ 127 (230)
T PRK13385 91 GLDRI--GNEDVILVHDGARPFLTQDIIDRLLEGVAKYG 127 (230)
T ss_pred HHHhc--cCCCeEEEccCCCCCCCHHHHHHHHHHHhhCC
Confidence 88764 246889999999544 9999999999884433
|
|
| >PF14097 SpoVAE: Stage V sporulation protein AE1 | Back alignment and domain information |
|---|
Probab=81.33 E-value=23 Score=31.35 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=55.6
Q ss_pred EEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe--cCCCCCChhHHHHHHHhhhccCCc-EEEEecCCCC
Q 044519 125 VQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR--KNRNGYKAGALKEGLEKQYVKDCQ-FVVIFDADFQ 201 (534)
Q Consensus 125 I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r--~~~~g~Ka~aln~gl~~a~~~~~d-~v~~lDaD~~ 201 (534)
|+|-|+ |...+ +.+|..+++ ...+.++. .+++.-...-+-..++.| .+| .++++|+--.
T Consensus 3 IlvTDG--D~~A~--------ravE~aa~~-----iGgRCIS~S~GNPT~lsG~elV~lIk~a---~~DPV~VMfDD~G~ 64 (180)
T PF14097_consen 3 ILVTDG--DEYAK--------RAVEIAAKN-----IGGRCISQSAGNPTPLSGEELVELIKQA---PHDPVLVMFDDKGF 64 (180)
T ss_pred EEEECC--hHHHH--------HHHHHHHHH-----hCcEEEeccCCCCCcCCHHHHHHHHHhC---CCCCEEEEEeCCCC
Confidence 446677 55544 455544443 34445543 344433445677777777 555 5666677666
Q ss_pred CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC
Q 044519 202 PDEDFLWRTIPYLLENKELGLVQARWKFVNAD 233 (534)
Q Consensus 202 ~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~ 233 (534)
.....=++.+.+...+|++.+.+.--...|..
T Consensus 65 ~g~G~GE~Al~~v~~h~~IeVLG~iAVASnT~ 96 (180)
T PF14097_consen 65 IGEGPGEQALEYVANHPDIEVLGAIAVASNTH 96 (180)
T ss_pred CCCCccHHHHHHHHcCCCceEEEEEEEEecCC
Confidence 66666677778887889887776665555544
|
|
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=81.30 E-value=4.3 Score=38.07 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=60.8
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC-CCChhHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN-GYKAGALKE 180 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~-g~Ka~aln~ 180 (534)
..+.+.++|+++.+..- .++ ++|+.+-.. ++++++..++ +.+.+++..+... ++-...+-.
T Consensus 30 gr~ii~~~i~~L~~~gi--~e~-vvV~~g~~~------------~lve~~l~~~---~~~~~iv~N~~y~ktN~~~Sl~~ 91 (239)
T COG1213 30 GREIIYRTIENLAKAGI--TEF-VVVTNGYRA------------DLVEEFLKKY---PFNAKIVINSDYEKTNTGYSLLL 91 (239)
T ss_pred CeEeHHHHHHHHHHcCC--ceE-EEEeccchH------------HHHHHHHhcC---CcceEEEeCCCcccCCceeEEee
Confidence 34678999999988653 233 336656333 3555555554 3355555433222 112335666
Q ss_pred HHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 044519 181 GLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 223 (534)
|.+.. +++ ++++|+|++.+|++++++++.= .+..++.
T Consensus 92 akd~~---~~~-fii~~sD~vye~~~~e~l~~a~--~~~li~d 128 (239)
T COG1213 92 AKDYM---DGR-FILVMSDHVYEPSILERLLEAP--GEGLIVD 128 (239)
T ss_pred ehhhh---cCc-EEEEeCCEeecHHHHHHHHhCc--CCcEEEe
Confidence 77776 666 8899999999999999998852 3444443
|
|
| >cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
Probab=80.79 E-value=20 Score=33.69 Aligned_cols=97 Identities=14% Similarity=0.072 Sum_probs=53.7
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-+. ..+..+++++.+... .++.| |+.. ..+... +...+....+.++.++..+ ...|-+
T Consensus 25 l~~i~g~-~li~~~l~~l~~~~~--~~i~v-v~~~-~~~~~~------------~~~~~~~~~~~~i~~~~~~-~~~g~~ 86 (236)
T cd04189 25 LIPVAGK-PIIQYAIEDLREAGI--EDIGI-VVGP-TGEEIK------------EALGDGSRFGVRITYILQE-EPLGLA 86 (236)
T ss_pred eeEECCc-chHHHHHHHHHHCCC--CEEEE-EcCC-CHHHHH------------HHhcchhhcCCeEEEEECC-CCCChH
Confidence 4565554 788999999987542 33333 4433 222222 2222211123455555333 223478
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
+++..|.+.. +.+-++++.+|.+.+++... ++..+
T Consensus 87 ~sl~~a~~~i---~~~~~li~~~D~~~~~~~~~-~~~~~ 121 (236)
T cd04189 87 HAVLAARDFL---GDEPFVVYLGDNLIQEGISP-LVRDF 121 (236)
T ss_pred HHHHHHHHhc---CCCCEEEEECCeecCcCHHH-HHHHH
Confidence 8888888765 33335558899988877554 55444
|
This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in |
| >cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis | Back alignment and domain information |
|---|
Probab=80.66 E-value=29 Score=33.93 Aligned_cols=117 Identities=16% Similarity=0.211 Sum_probs=59.3
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK-- 168 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~-- 168 (534)
.++|+....|-.+.+..++.|++.-. +..+.+.|. |+.+++..+ .+.+. +...+..+.....+
T Consensus 2 ~~~iv~~~~~y~~~~~~~i~Sil~n~--~~~~~fhii~d~~s~~~~~---------~l~~~---~~~~~~~i~f~~i~~~ 67 (280)
T cd06431 2 HVAIVCAGYNASRDVVTLVKSVLFYR--RNPLHFHLITDEIARRILA---------TLFQT---WMVPAVEVSFYNAEEL 67 (280)
T ss_pred EEEEEEccCCcHHHHHHHHHHHHHcC--CCCEEEEEEECCcCHHHHH---------HHHHh---ccccCcEEEEEEhHHh
Confidence 46777777554588899999998743 233555555 444444333 22222 11224455555332
Q ss_pred -CC-----CCCChhH---HHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHH---HhcCCcEEEEe
Q 044519 169 -NR-----NGYKAGA---LKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY---LLENKELGLVQ 224 (534)
Q Consensus 169 -~~-----~g~Ka~a---ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~---~~~~~~v~~V~ 224 (534)
+. +...+.. ....+......+.|-++.+|+|.++..| +.++... + .+..+.++.
T Consensus 68 ~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~d-i~eL~~~~~~~-~~~~~~a~v 133 (280)
T cd06431 68 KSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATD-IAELWKIFHKF-TGQQVLGLV 133 (280)
T ss_pred hhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCC-HHHHHHHhhhc-CCCcEEEEe
Confidence 11 1111111 1112222222368999999999888444 3444443 3 333455543
|
The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil |
| >PLN02458 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=80.34 E-value=29 Score=34.28 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=58.3
Q ss_pred CCCcEEEEEeccC-ch---HHHHHHHHHHHcCCCCCCceEEEEEcCCC-hhhhchhhhhhhHHHHHHHHHHHhhcCccEE
Q 044519 89 SYPMVLVQIPMYN-EK---EVYKLSIGAACGLSWPSDRLIVQVLDDST-NEVLRTDFFQYTQKLVELECLKWIEKGVNVK 163 (534)
Q Consensus 89 ~~P~VsViIP~yn-e~---~~l~~~L~sl~~q~yp~~~~~I~V~Dds~-D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~ 163 (534)
..+.|-||-|+|. .. ..+.+.-..+.--.+| -.. ||++|+. -+++. ++++ + -|..-+
T Consensus 110 ~~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~p-L~W--IVVEd~~~t~~va--------~lLr----r---sGl~y~ 171 (346)
T PLN02458 110 PRRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPP-LLW--IVVEGQSDSEEVS--------EMLR----K---TGIMYR 171 (346)
T ss_pred CCceEEEECCCCCCcchhHHHHHHHHHHHhcCCCC-ceE--EEEeCCCCCHHHH--------HHHH----H---cCCceE
Confidence 3456888999998 33 3455555555444333 333 3454433 22222 2333 2 245444
Q ss_pred EEEecCC----CCCChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHH
Q 044519 164 YETRKNR----NGYKAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 164 ~~~r~~~----~g~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
++..+++ .+.....+|.|+++... ...-+|.|.|+|...+-+..+++
T Consensus 172 HL~~k~~~~~~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEm 223 (346)
T PLN02458 172 HLVFKENFTDPEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEI 223 (346)
T ss_pred EeccCCCCCCccchhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHH
Confidence 4432211 12235668999998733 23458888999999988877764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 534 | ||||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 2e-23 |
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 534 | |||
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 7e-04 |
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 4e-06
Identities = 44/296 (14%), Positives = 88/296 (29%), Gaps = 53/296 (17%)
Query: 71 RYTEYKLEEMKEDLELNKSY-PMVLVQIPMYNEKEVYKLSIGAACG-LSWPSDRLIVQVL 128
Y + +D + + + IP YN ++ +++ C + +IV
Sbjct: 72 DYVWAGKRKELDDYPRKQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIV-AD 130
Query: 129 DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVK 188
D S + E ++ E +N+KY +K+ GL
Sbjct: 131 DGSKENIE--------------EIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRA---- 172
Query: 189 DCQ--FVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL- 245
+ +V I D D P+ ++ + L + + L+ R + + L + SL
Sbjct: 173 -AKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLI 231
Query: 246 -------------------------DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA 280
HF + F F+G + + + A
Sbjct: 232 NEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA 291
Query: 281 GGWK---DRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSC 333
G + ED + R +G F V ++ P + + +
Sbjct: 292 GWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETDRAAGKNI 347
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 76/481 (15%), Positives = 149/481 (30%), Gaps = 153/481 (31%)
Query: 4 LIFQEPKERV---TDGTSGISYAW--NSIRASVIVPLLHLAIILCSVMSLMLFIE---RV 55
+ + +E V + I+Y + + I+ P M ++IE R+
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP----------SMMTRMYIEQRDRL 119
Query: 56 YMAIVILYVK--VLRKKRYTEYK--LEEMK--EDLELN------KSYPMVL--------- 94
Y ++ K V R + Y + + L E++ +++ ++ K+ +
Sbjct: 120 Y-NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT---WVALDVCLSYK 175
Query: 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVL---------------DDSTNEVLRTD 139
VQ M + ++ L++ S ++++L D S+N LR
Sbjct: 176 VQCKMDFK--IFWLNLKNCN-----SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 140 FFQYTQKLVEL-------ECL--------KWIEKGVNVK----YETR----------KNR 170
Q +L L CL N+ TR
Sbjct: 229 SIQ--AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286
Query: 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQ--PDEDFLWRTIPYLLENKELGLVQA--- 225
L VK + D Q P E + T P L ++
Sbjct: 287 THISLDHHSMTLTPDEVKS-LLLKYLDCRPQDLPRE--VLTTNPRRL-----SIIAESIR 338
Query: 226 -------RWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFF--GFNGTAGVWRIQA 276
WK VN D+ +T + E SL+ E F + + +
Sbjct: 339 DGLATWDNWKHVNCDK--LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI- 395
Query: 277 IEDAGGWKDRTTVEDMDLA---VRASL--KGWK--FVFVGDLGVKNELPSTFKAY----- 324
W D + M + + SL K K + + + ++ ++ +
Sbjct: 396 ------WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI 449
Query: 325 --RYQQHR----WSCGPSNL----FSKMT---REIILCERVSVWKRLYLIYAFFIVRKII 371
Y + P L +S + + I ER+++++ ++L + F+ +KI
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR-FLEQKIR 508
Query: 372 A 372
Sbjct: 509 H 509
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 6e-05
Identities = 64/388 (16%), Positives = 123/388 (31%), Gaps = 109/388 (28%)
Query: 161 NVKYETRKNRNGYKAGALKEGLEKQYVKD--CQFV------VIFDADF-----QPDEDFL 207
++ +ET +++ YK + E +V + C+ V ++ + D
Sbjct: 6 HMDFETGEHQYQYKD--ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 208 WRTIPYLLENKELGLVQARWKFVNAD-----ECLMTRLQEM----SLDYHFSVEQ-EVGS 257
+ + L +K+ +VQ KFV + LM+ ++ S+ +EQ +
Sbjct: 64 TLRLFWTLLSKQEEMVQ---KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 258 STCQFFG-FNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFV-GDLGV-K 314
+ Q F +N V R+Q K R + L+ K V + G LG K
Sbjct: 121 NDNQVFAKYN----VSRLQPY-----LKLRQALL--------ELRPAKNVLIDGVLGSGK 163
Query: 315 NEL-PSTFKAYRYQQHR-----W----SCGPS--------NLFSKMT-----------RE 345
+ +Y+ Q W +C L ++
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 346 IILCERVSVWKRLYLIY-----AFFIVRKI--IAHWVTFFFYC-IVIPTSVLVPEIQLTK 397
+ + R L ++ + W F C I++ T Q+T
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR----FKQVTD 279
Query: 398 PIAIYIPATITL--LNAVCTPR-SFHLIVFWILFENVMSLLRAKA--------AIIGLL- 445
++ I+L + TP L++ ++ + L + +II
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYL--DCRPQDLPREVLTTNPRRLSIIAESI 337
Query: 446 --EANRVNEWVVTEKHGNTKKQKNNIKT 471
+ W KH N K I++
Sbjct: 338 RDGLATWDNW----KHVNCDKLTTIIES 361
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Length = 657 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 7e-04
Identities = 43/319 (13%), Positives = 82/319 (25%), Gaps = 60/319 (18%)
Query: 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRL-IVQVLDDSTNEVLRTDFFQYTQKLVE 149
+ V IP +N ++ + V V D +V F
Sbjct: 180 ANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFP------- 232
Query: 150 LECLKWIEKGVNVKYETRKNRNGYKAG---ALKEGLEKQYVKDCQFVVIFDADFQPDEDF 206
G + + N G G + E L+ DCQ ++ D D + + D
Sbjct: 233 ---AAAARLGSRLSIHDQPNL-GGSGGYSRVMYEALKN---TDCQQILFMDDDIRLEPDS 285
Query: 207 LWRTIPYLLENKELGLVQA-------RWK------FVNADECLMTRLQEMSLDYHFS--- 250
+ R + K LV V+ + T D+ F+
Sbjct: 286 ILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYP 345
Query: 251 -----VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD---RTTVEDMDLAVRASLKG 302
++ + Q E+ G + +D D +RA+ G
Sbjct: 346 LNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIK--WDDADYGLRAAEHG 403
Query: 303 WKFVFVGDLGV----KNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRL 358
+ V + + ++ Y R N ++ K
Sbjct: 404 YPTVTLPGAAIWHMAWSDKDDAIDWQAYFHLR------NRL------VVAAMHWDGPKAQ 451
Query: 359 YLIYAFFIVRKIIAHWVTF 377
+ ++ + H
Sbjct: 452 VIGLVRSHLKATLKHLACL 470
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.94 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.94 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.93 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.93 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.92 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.91 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.9 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 99.9 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 99.87 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 99.83 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 99.8 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 99.79 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 99.75 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 99.62 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 99.14 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 98.93 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 98.88 | |
| 3lw6_A | 287 | FI08434P, beta-4-galactosyltransferase 7; protein- | 98.44 | |
| 2c0n_A | 203 | A197; thermophil protein, thermophilic virus, STIV | 96.71 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 95.62 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 94.61 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 93.96 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 93.46 | |
| 3cu0_A | 281 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 92.51 | |
| 2d0j_A | 246 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 91.74 | |
| 1omz_A | 293 | Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro | 91.18 | |
| 1v84_A | 253 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 90.77 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 84.9 | |
| 3f1c_A | 246 | Putative 2-C-methyl-D-erythritol 4-phosphate cytid | 83.08 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 82.55 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 82.37 | |
| 3d5n_A | 197 | Q97W15_sulso; NESG, SSR125, structural genomics, P | 82.13 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 80.88 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=388.81 Aligned_cols=356 Identities=24% Similarity=0.373 Sum_probs=246.1
Q ss_pred CCCCcEEEEEeccCchH-HHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhch------hhhhhhHHHHHHHHHHHhhcC
Q 044519 88 KSYPMVLVQIPMYNEKE-VYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRT------DFFQYTQKLVELECLKWIEKG 159 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~-~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~------~~~~~~~~~v~~~~~~~~~~~ 159 (534)
++.|+|||+||+|||++ .+++||+|+.+|+||+++++|+|+|| |+|+|.+. +..+...+.+++.+++
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~----- 211 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRE----- 211 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHH-----
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHh-----
Confidence 56899999999999995 45999999999999987776766665 88887431 1111111233333333
Q ss_pred ccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhH
Q 044519 160 VNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR 239 (534)
Q Consensus 160 ~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~ 239 (534)
.+++++.++++++||++|+|.|++++ ++|||+++|+|++++||+++++++.+++||++++|+++....|++. ....
T Consensus 212 ~~v~~i~~~~~~~GKa~alN~gl~~a---~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~ 287 (802)
T 4hg6_A 212 LGVVYSTRERNEHAKAGNMSAALERL---KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRN 287 (802)
T ss_dssp HTCEEEECSSCCSHHHHHHHHHHHHC---CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHH
T ss_pred cCcEEEEecCCCCcchHHHHHHHHhc---CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-Hhhh
Confidence 46778888888788999999999999 9999999999999999999999999988999999999988777642 1111
Q ss_pred hHhh-----hcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 240 LQEM-----SLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 240 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
.... +....+...+...... ....++|+++++||++++++|||+++.++||.+++.|+.++||++.++|++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~ 366 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRW-GGAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIA 366 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHT-TCCCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEE
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhc-CCceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEE
Confidence 1100 0011122222211111 223368999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cc-
Q 044519 315 NELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLV-PE- 392 (534)
Q Consensus 315 ~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~-~~- 392 (534)
++.|+|++++.+||+||.+|..|.+.++. .+..++++..+++.++..+.. ++.++..+ .+ ++.|+.++. +.
T Consensus 367 ~~~p~t~~~~~~Qr~RW~~G~~q~l~~~~--pl~~~~l~~~~rl~~l~~~~~---~~~~~~~l-i~-ll~p~~~ll~~~~ 439 (802)
T 4hg6_A 367 GLQPETFASFIQQRGRWATGMMQMLLLKN--PLFRRGLGIAQRLCYLNSMSF---WFFPLVRM-MF-LVAPLIYLFFGIE 439 (802)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHHHHHHHSC--TTSCSSCCHHHHHHHHHHHHH---TTHHHHHH-HH-HHHHHHHHHHCCC
T ss_pred ecCCCCHHHHHHHHHHHHccHHHHHHHhC--ccccCCCCHHHHHHHHHHHHH---HHHHHHHH-HH-HHHHHHHHHHhHH
Confidence 99999999999999999999999988753 234467888888876654332 11111111 11 122332222 11
Q ss_pred ---cchhHHHHHHHHHHHHHH---HHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCCCcc
Q 044519 393 ---IQLTKPIAIYIPATITLL---NAVCTPRSFHLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTK 463 (534)
Q Consensus 393 ---~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~~~~ 463 (534)
.....+..+++|.++... ..+....... ....+++.+++++.+.+++.++++ .++.+|.+|+|++..+
T Consensus 440 ~~~~~~~~~~~~~lp~~l~~~~~~~~~~~~~r~~--~~~~l~~~~~~~~~~~a~l~~l~~-~~~~~f~VT~Kg~~~~ 513 (802)
T 4hg6_A 440 IFVATFEEVLAYMPGYLAVSFLVQNALFARQRWP--LVSEVYEVAQAPYLARAIVTTLLR-PRSARFAVTAKDETLS 513 (802)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHHHHHHHTTTSCT--THHHHHHHHHHHHHHHHHHHHHHS-TTCCCCCCCCCCCCCS
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHhcCcHHH--HHHHHHHHHHHHHHHHHHHHHHhC-CCCCcceECCCCcccc
Confidence 112223333444333211 1122222211 122466777888889999999994 4678999999976544
|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-27 Score=223.02 Aligned_cols=206 Identities=15% Similarity=0.115 Sum_probs=139.0
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+ +++++.++ ..++++++ .
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIv-vDd~S~d~t~~---------~~~~~~~~----~~~i~~i~-~ 67 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIIL-IDDESPDNCPK---------ICDDYAAQ----YPNIKVIH-K 67 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEE-EECCCSSSHHH---------HHHHHHHH----CSSEEEEE-C
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEE-EECCCCcCHHH---------HHHHHHhh----CCCEEEEE-C
Confidence 3689999999999999999999999999998655433 56668888877 77665544 46788885 3
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc-cc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL-DY 247 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~-~~ 247 (534)
++.|++.|+|.|+++| +||||+++|+|+.++|++|+++++.+.+ ++.+++.+.....+.+............ ..
T Consensus 68 -~n~G~~~a~N~g~~~a---~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (240)
T 3bcv_A 68 -KNAGLGMACNSGLDVA---TGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKL 142 (240)
T ss_dssp -CCCCHHHHHHHHHHHC---CSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEE
T ss_pred -CCCChHHHHHHHHHHc---CCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCcccccccccccccc
Confidence 4667999999999999 9999999999999999999999999954 3455555544333322210000000000 00
Q ss_pred chhhh---hhcccccCc--------cccccCCcchhhHHHHHHhC-CCCCC--CccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 248 HFSVE---QEVGSSTCQ--------FFGFNGTAGVWRIQAIEDAG-GWKDR--TTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 248 ~~~~~---~~~~~~~~~--------~~~~~G~~~~~Rr~~l~~~G-g~~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
.+... ......... ....+|+++++||++++++| ||++. ...||.+++.|+.++|+++.++|++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~ 222 (240)
T 3bcv_A 143 YKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFY 222 (240)
T ss_dssp ECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC----
T ss_pred ccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeE
Confidence 00000 000000000 11235788999999999999 99986 458999999999999999999999865
Q ss_pred c
Q 044519 314 K 314 (534)
Q Consensus 314 ~ 314 (534)
+
T Consensus 223 ~ 223 (240)
T 3bcv_A 223 N 223 (240)
T ss_dssp -
T ss_pred E
Confidence 4
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-26 Score=238.45 Aligned_cols=240 Identities=14% Similarity=0.095 Sum_probs=168.0
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCc-cEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGV-NVKY 164 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~ 164 (534)
++.|.|||+||+|||+ +.+.+||+|+++|+||+...+|+|+ |+|+|+... ++++++.++ .. ++++
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~--------~~l~~~~~~----~~~~v~v 93 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLK--------RPLESYVKK----LKVPVHV 93 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGT--------HHHHHHHHS----SSSCEEE
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHH--------HHHHHHHHH----CCCcEEE
Confidence 5689999999999999 9999999999999998753445455 558876444 366665543 34 6888
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhh---HhH
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMT---RLQ 241 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~---~~~ 241 (534)
++.+++ .|+++|+|.|+++| +||||+++|+|+.++|++|++++..+.++++++++ +.....+.+..... ...
T Consensus 94 i~~~~n-~G~~~a~N~g~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~ 168 (472)
T 1xhb_A 94 IRMEQR-SGLIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMT 168 (472)
T ss_dssp EECSSC-CCHHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTE
T ss_pred EECCCC-CChHHHHHHHHHhc---cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcc
Confidence 855544 45999999999999 99999999999999999999999999778877654 44433333211000 000
Q ss_pred --hhhcccchhhh------hhcc----cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEE
Q 044519 242 --EMSLDYHFSVE------QEVG----SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 242 --~~~~~~~~~~~------~~~~----~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~ 306 (534)
.+.....+... ...+ ..........|+++++||++++++|||++... +||.|+++|+.+.|+++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~ 248 (472)
T 1xhb_A 169 YGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLE 248 (472)
T ss_dssp EEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEE
T ss_pred cceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEE
Confidence 00000000000 0000 00112233578999999999999999998665 799999999999999999
Q ss_pred EeccCcccccCCcC-------------HHHHHHHHhhhccchhhHHhhhhh
Q 044519 307 FVGDLGVKNELPST-------------FKAYRYQQHRWSCGPSNLFSKMTR 344 (534)
Q Consensus 307 ~~~~~~~~~~~p~t-------------~~~~~~Qr~RW~~G~~~~~~~~~~ 344 (534)
++|.+.++|....+ .+...+...+|..+..+.+....+
T Consensus 249 ~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p 299 (472)
T 1xhb_A 249 IVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISP 299 (472)
T ss_dssp EEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTST
T ss_pred EccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999886654333 345566677899888776655433
|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-27 Score=225.74 Aligned_cols=216 Identities=13% Similarity=0.122 Sum_probs=152.1
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN- 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~- 169 (534)
|.|||+||+||+++.+++||+|+++|+||+.+++| |+|+|+|+|.+ +++++ .. +.++++++.+.
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiiv-vDd~S~d~t~~---------~~~~~----~~-~~~i~~i~~~~~ 65 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLN---------VIRPF----LN-DNRVRFYQSDIS 65 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEE-EECSCCHHHHH---------HHGGG----GG-STTEEEEECCCC
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEE-EECCCCchHHH---------HHHHH----hh-cCCEEEEecccc
Confidence 68999999999999999999999999999655433 56668888776 55433 22 56788886541
Q ss_pred ------CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEee--cCCCchhhHhH
Q 044519 170 ------RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFV--NADECLMTRLQ 241 (534)
Q Consensus 170 ------~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~--n~~~~~~~~~~ 241 (534)
.+.|+++|+|.|+++| +||||+++|+|+.++|++|++++..+.++|++++|++..... +.+........
T Consensus 66 ~~~~~~~n~G~~~a~N~gi~~a---~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 142 (255)
T 1qg8_A 66 GVKERTEKTRYAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETV 142 (255)
T ss_dssp SHHHHHSSCHHHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEE
T ss_pred cccccccccCHHHHHHHHHHHc---CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhcc
Confidence 3556999999999999 999999999999999999999999998889999999988765 43322111100
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CC------CC-CCccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GW------KD-RTTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~------~~-~~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
.... .........+.|+++++||++++++| || ++ ....||.+++.|+.+.| ++.++|++.+
T Consensus 143 -------~~~~---~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~ 211 (255)
T 1qg8_A 143 -------RPAA---QVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELD 211 (255)
T ss_dssp -------ECCC---SCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEE
T ss_pred -------CchH---HHHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEE
Confidence 0000 00001223357899999999999998 77 43 23589999999999987 6999998876
Q ss_pred ccc-CCcCHHH--HHHHHhhhccch
Q 044519 314 KNE-LPSTFKA--YRYQQHRWSCGP 335 (534)
Q Consensus 314 ~~~-~p~t~~~--~~~Qr~RW~~G~ 335 (534)
... .+.+... ..+|+.+|.+..
T Consensus 212 ~~r~~~~s~s~~~~~~~~~~~~~~~ 236 (255)
T 1qg8_A 212 LNYITDQSIHFQLFELEKNEFVRNL 236 (255)
T ss_dssp EEEEC--------------CTGGGS
T ss_pred EEEEcCCccchhHHHHHHHHHHHhc
Confidence 543 3444433 345566665544
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-25 Score=236.00 Aligned_cols=237 Identities=14% Similarity=0.092 Sum_probs=168.4
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
+..|.||||||+|||+ +.+.+||+|+++|+||+...+|+ |+|+|+|++.. +++++++++ ..+++++
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~--------~~l~~~~~~----~~~v~vi 176 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLK--------KPLEDYMAL----FPSVRIL 176 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGT--------HHHHHHHTT----STTEEEE
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHH--------HHHHHHHHh----CCeEEEE
Confidence 5689999999999999 99999999999999987533444 55568898844 377665543 3678888
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHh----H
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRL----Q 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~----~ 241 (534)
+.+ .+.|++.|+|.|+++| ++|||+++|+|+.++|++|+.++..+.+++++ +|++.....+.+....... .
T Consensus 177 ~~~-~n~G~~~A~N~G~~~A---~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~ 251 (570)
T 2d7i_A 177 RTK-KREGLIRTRMLGASVA---TGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAM 251 (570)
T ss_dssp ECS-SCCCHHHHHHHHHHHC---CSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSC
T ss_pred ECC-CCCCHHHHHHHHHHhc---CCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcc
Confidence 554 4455999999999999 99999999999999999999999999777765 5666555544432110000 0
Q ss_pred hhhccc--chhhhhh-----cc--cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEec
Q 044519 242 EMSLDY--HFSVEQE-----VG--SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 242 ~~~~~~--~~~~~~~-----~~--~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~ 309 (534)
...+.. .+..... .. ........+.|+++++||++++++|||++... .||.|+++|+.+.|+++.++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 331 (570)
T 2d7i_A 252 RGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIP 331 (570)
T ss_dssp EEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEcc
Confidence 000000 0000000 00 01112233579999999999999999998654 799999999999999999999
Q ss_pred cCcccccC----CcC-------HHHHHHHHhhhccchhhHHhh
Q 044519 310 DLGVKNEL----PST-------FKAYRYQQHRWSCGPSNLFSK 341 (534)
Q Consensus 310 ~~~~~~~~----p~t-------~~~~~~Qr~RW~~G~~~~~~~ 341 (534)
.+.+++.. |.+ .+...+...+|.....+.+.+
T Consensus 332 ~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~ 374 (570)
T 2d7i_A 332 CSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ 374 (570)
T ss_dssp EEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT
T ss_pred CeEEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99887642 211 345566677898887665543
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=237.99 Aligned_cols=219 Identities=19% Similarity=0.215 Sum_probs=159.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|.|||+||+|||++.+.+||+|+.+|+++.. .+|+ |+|+|+|++.+ +++++. ...+++++.
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~-~eiivvDd~s~d~t~~---------~~~~~~-----~~~~i~~i~ 154 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYD-YEVIVADDGSKENIEE---------IVREFE-----SLLNIKYVR 154 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSC-EEEEEEEESCSSCHHH---------HHHTTT-----TTSCEEEEE
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCCC-eEEEEEeCCCchhHHH---------HHHHhh-----hcCCeEEEE
Confidence 3458999999999999999999999999988743 4444 55568887766 655432 235788887
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
+++.++|+++|+|.|+++| ++|||+++|+|+.++|++|.+++..+.++|+++++++.....+...............
T Consensus 155 ~~~~~~g~~~a~N~g~~~a---~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 231 (625)
T 2z86_A 155 QKDYGYQLCAVRNLGLRAA---KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLI 231 (625)
T ss_dssp ECCCSCCHHHHHHHHHHHC---CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGG
T ss_pred eCCCCcchhHHHHHHHHhC---CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHh
Confidence 7665667999999999999 9999999999999999999999999987899998888776554432221111100000
Q ss_pred c---------------------c-----hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHH
Q 044519 247 Y---------------------H-----FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVR 297 (534)
Q Consensus 247 ~---------------------~-----~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~r 297 (534)
. . +...............+.|+++++||++++++|||++... .||.|++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~R 311 (625)
T 2z86_A 232 NEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYR 311 (625)
T ss_dssp GTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHH
T ss_pred hhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhh
Confidence 0 0 0000000111112233689999999999999999998664 699999999
Q ss_pred HHhCCCEEEEeccCcccccCCcCHHHH
Q 044519 298 ASLKGWKFVFVGDLGVKNELPSTFKAY 324 (534)
Q Consensus 298 l~~~G~ki~~~~~~~~~~~~p~t~~~~ 324 (534)
+.++|+++.++|++.+++..|.+-...
T Consensus 312 l~~~G~~i~~~p~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 312 LYREGCYFRSVEGAMAYHQEPPGKENE 338 (625)
T ss_dssp HHHTTCEEEECGGGCEEEECCC-----
T ss_pred HHhCCceEEEcccchhhccCCccccch
Confidence 999999999999999999888765443
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=227.74 Aligned_cols=208 Identities=15% Similarity=0.101 Sum_probs=149.8
Q ss_pred CCCCcEEEEEeccCchH-HHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKE-VYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~-~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
++.|.||||||+|||++ .+.++|+|+++|++|+...+|+ |+|+|+|++.+ +.+ ++..+++++
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~--------~~~--------~~~~~v~vi 126 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG--------ALL--------GKIEKVRVL 126 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH--------HGG--------GGBTTEEEE
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH--------HHH--------hcCCCEEEE
Confidence 56899999999999996 9999999999999987533444 45558888765 222 224678888
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhh-Hh----
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMT-RL---- 240 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~-~~---- 240 (534)
+.+ ++.|++.|+|.|+++| +||||+++|+|+.++|++|+.++..+.+++. ++|++.....+.+..... ..
T Consensus 127 ~~~-~n~G~~~A~N~G~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
T 2ffu_A 127 RND-RREGLMRSRVRGADAA---QAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLK 201 (501)
T ss_dssp ECS-SCCHHHHHHHHHHHHC---CSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEE
T ss_pred ECC-CCcCHHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccc
Confidence 554 4455999999999999 9999999999999999999999999966655 477776655543321000 00
Q ss_pred Hhhhcccchh-----hh-hhcc----cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEE
Q 044519 241 QEMSLDYHFS-----VE-QEVG----SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVF 307 (534)
Q Consensus 241 ~~~~~~~~~~-----~~-~~~~----~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~ 307 (534)
........+. .. ...+ ........+.|++.++||++++++|||++... +||.|+++|+.+.|+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 281 (501)
T 2ffu_A 202 GGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEI 281 (501)
T ss_dssp EEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred eEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEE
Confidence 0000000000 00 0000 00111223579999999999999999998654 8999999999999999999
Q ss_pred eccCccccc
Q 044519 308 VGDLGVKNE 316 (534)
Q Consensus 308 ~~~~~~~~~ 316 (534)
+|++.+.+.
T Consensus 282 ~p~~~v~H~ 290 (501)
T 2ffu_A 282 IPCSRVGHV 290 (501)
T ss_dssp EEEEEEEEC
T ss_pred ccCcEEEEE
Confidence 999888775
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-24 Score=231.68 Aligned_cols=222 Identities=14% Similarity=0.150 Sum_probs=166.2
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+ +++++.+ +..++++++
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiiv-vdd~S~d~t~~---------~~~~~~~----~~~~i~~~~-- 436 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCI-CDDGSTDDTLR---------ILQEHYA----NHPRVRFIS-- 436 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEE-EEESCSSSHHH---------HHHHHHT----TCTTEEEEE--
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEE-EECcCChhHHH---------HHHHHHh----hCCcEEEEe--
Confidence 4689999999999999999999999999998755433 66779998877 6665443 346788884
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYH 248 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 248 (534)
+++.|+++|+|.|++.| +||||+++|+|++++|++|++++..+.++|++++|++.....+.+......... .. .
T Consensus 437 ~~n~G~~~a~n~g~~~a---~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~-~ 510 (625)
T 2z86_A 437 QKNKGIGSASNTAVRLC---RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYN--WP-I 510 (625)
T ss_dssp ECCCCHHHHHHHHHHHC---CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCC--CS-S
T ss_pred CCCCCHHHHHHHHHHhc---CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcc--cc-c
Confidence 35566999999999999 999999999999999999999999998899999999987766655433221100 00 0
Q ss_pred hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHHHHHHhCCCEEEEeccCccc---ccCCcCHHHH
Q 044519 249 FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLAVRASLKGWKFVFVGDLGVK---NELPSTFKAY 324 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~---~~~p~t~~~~ 324 (534)
+..... ....+.|+++++||++++++|||++.. .+||.|++.|+.+.| ++.++|++..+ +....+.+..
T Consensus 511 ~~~~~~------~~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~ 583 (625)
T 2z86_A 511 YSREKL------TSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKL 583 (625)
T ss_dssp CCHHHH------TTSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSH
T ss_pred CCHHHH------hhcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhH
Confidence 000000 012246889999999999999999853 589999999999999 99999998765 3445566666
Q ss_pred HHHHhhhccchhhHH
Q 044519 325 RYQQHRWSCGPSNLF 339 (534)
Q Consensus 325 ~~Qr~RW~~G~~~~~ 339 (534)
..|+.+|.+...+.+
T Consensus 584 ~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 584 DIQKENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 677766655444433
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=227.97 Aligned_cols=230 Identities=16% Similarity=0.127 Sum_probs=156.2
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCce-EEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRL-IVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~-~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
...|+|||+||+||+++.+.+||+|+.+|+|+.+.. +|+|+ |+|+|++... +.. +..++ .+.+++++
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~-------~~~-e~~~~---~~~~I~vI 245 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHP-------DFP-AAAAR---LGSRLSIH 245 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGST-------THH-HHHHH---HGGGEEEE
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchH-------HHH-HHHHh---cCCCEEEE
Confidence 346899999999999999999999999999832222 34445 5577753220 122 22222 24578888
Q ss_pred EecCCCCCChhHHHHHHHhhhcc-CCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCch------hh
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVK-DCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECL------MT 238 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~-~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~------~~ 238 (534)
..+ |.|.++|.|.|++.|... ++|||+++|+|++++|++|++++..+..++++++|++.....+.+... ..
T Consensus 246 ~~~--N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~ 323 (657)
T 4fix_A 246 DQP--NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVD 323 (657)
T ss_dssp ECC--CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEE
T ss_pred ECC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEec
Confidence 543 666999999999998443 679999999999999999999999998888999998876544432111 00
Q ss_pred H-------hHhhhcccchh---h-----hhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHHHHHHhCC
Q 044519 239 R-------LQEMSLDYHFS---V-----EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLAVRASLKG 302 (534)
Q Consensus 239 ~-------~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G 302 (534)
. .....+...+. . ...............|+++++||++++++||+++.. ..||.|++.|+.++|
T Consensus 324 ~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G 403 (657)
T 4fix_A 324 RSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHG 403 (657)
T ss_dssp TTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcC
Confidence 0 00000000000 0 000001111223457899999999999999998533 379999999999999
Q ss_pred CEEEEeccCcccccCCcC------HHHHHHHHhh
Q 044519 303 WKFVFVGDLGVKNELPST------FKAYRYQQHR 330 (534)
Q Consensus 303 ~ki~~~~~~~~~~~~p~t------~~~~~~Qr~R 330 (534)
++++++|++.++|....+ ++.+...|.|
T Consensus 404 ~ki~~~p~a~V~H~~~~~~~~~s~~r~Yy~~RN~ 437 (657)
T 4fix_A 404 YPTVTLPGAAIWHMAWSDKDDAIDWQAYFHLRNR 437 (657)
T ss_dssp CCEEEEEEEEEEECCSSSSCCTTSTHHHHHHHHH
T ss_pred CeEEEECCEEEEEcCcCccccccHHHHHHHHHHH
Confidence 999999999998865432 3445544444
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.3e-23 Score=205.66 Aligned_cols=204 Identities=15% Similarity=0.051 Sum_probs=138.5
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCC-CceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPS-DRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~-~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
...|.|||+||+|||++.+.+||+|+++|+||. .++ |+|+|+|+|+|.+ +++++..+. ..+++++.
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~ei-ivVDdgS~D~t~~---------~~~~~~~~~---~~~~~~~~ 111 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDEL-IVLDSGSTDDTEI---------RAVAAGARV---VSREQALP 111 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEE-EEEECSCCSSHHH---------HHHHTTCEE---EEHHHHCT
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEE-EEEeCCCCchHHH---------HHHHhhhhh---ccceeeec
Confidence 456899999999999999999999999999985 443 3366679998877 655431110 01111221
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecC-CC-------chh
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNA-DE-------CLM 237 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~-~~-------~~~ 237 (534)
+.+.+.||+.|+|.|++.| +||||+++|+|+. ++|++|.+++..+.++|++++|+|....... +. ...
T Consensus 112 ~~~~n~G~~~a~n~g~~~a---~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~ 188 (329)
T 3ckj_A 112 EVPIRPGKGEALWRSLAAS---RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGG 188 (329)
T ss_dssp TSCCCCSHHHHHHHHHHHC---CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------
T ss_pred cCCCCCCHHHHHHHHHHhC---CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCC
Confidence 2456677999999999999 9999999999999 8999999999997688999999997654221 00 111
Q ss_pred hHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHh-CCCE-EEEeccCc
Q 044519 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASL-KGWK-FVFVGDLG 312 (534)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~-~G~k-i~~~~~~~ 312 (534)
.+.........+. .............|++.++||++++++| |++ ...||.++..++.+ .|++ +..+|...
T Consensus 189 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~-~~~~D~~l~~r~~~~~g~~~i~~v~~~~ 260 (329)
T 3ckj_A 189 GRVTELVARPLLA---ALRPELGCILQPLGGEYAATRELLTSVP-FAP-GYGVEIGLLVDTFDRLGLDAIAQVNLGV 260 (329)
T ss_dssp CHHHHHTHHHHHH---HHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCC-GGGHHHHHHHHHHHHHCGGGEEEEEEEE
T ss_pred CceehhhHHHHHH---HhhhhhccccCCCccceeeeHHHHHhCC-CCC-CCcccHHHHHHHHHhcCCccEeeecceE
Confidence 1111000000000 0011112223345777899999999996 764 45799999999986 6764 77776544
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-22 Score=222.08 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=0.0
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+ +++++.+++ +.++++++.+ .
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIV-VDDgStD~t~~---------il~~~~~~~---~~~i~~i~~~-~ 67 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIKQQRTQDFNLII-VNDGSTDQSKK---------LMDEAIKDY---DKNIRFIDLD-E 67 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCCcHHH---------HHHHHHHhC---CCCEEEEECC-C
Confidence 78999999999999999999999999999766443 66678998887 776665543 3578888544 4
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
+.|.++|+|.|++.| +||||+++|+|+.++|++|+++++.+. ++++ +.+.....+.+.............. ..
T Consensus 68 n~G~~~arN~gi~~A---~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~--v~~~~~~~~~~~~~~~~~~~~~~~~-~~ 140 (729)
T 3l7i_A 68 NSGHAHARNIALEEV---ETPYFMFLDADDELASYAITFYLEKFN-NTDG--LIAPIHSFTTQRPQFVDLDRVRVEY-FN 140 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHhc---cCCEEEEECCCCCCChhHHHHHHHHhc-CCCE--EEEeeEEeecCCCccccccceeeee-ec
Confidence 556999999999999 999999999999999999999999994 4443 3333322222211111111100000 00
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCC-ccchHHHHHHHHhCCCEEEEe-ccCcc
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRT-TVEDMDLAVRASLKGWKFVFV-GDLGV 313 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~-~~ED~~l~~rl~~~G~ki~~~-~~~~~ 313 (534)
..... ........+++.++||++++++| +|++.. ..||.+++.|+..+|+++.++ +.+..
T Consensus 141 ~~~~~---~~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~ 203 (729)
T 3l7i_A 141 AKENI---NSFLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFY 203 (729)
T ss_dssp ------------------------------------------------------------------
T ss_pred chhhH---HHHhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEE
Confidence 00000 01111346788999999999999 899864 699999999999999999999 55554
|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=3.9e-20 Score=180.37 Aligned_cols=179 Identities=17% Similarity=0.194 Sum_probs=127.3
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHH---cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAAC---GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~---~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
..|+||||||+||+++.++++|+|+. +|++++ .+|+|+||++|.+.
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~~f----------------------------- 111 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDTIF----------------------------- 111 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSCC-----------------------------
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCCcc-----------------------------
Confidence 45899999999999999999999998 677775 55667777665321
Q ss_pred EecCCCCCChhHHHHHH----HhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH
Q 044519 166 TRKNRNGYKAGALKEGL----EKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl----~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~ 241 (534)
+++.++|.|+ +.| ++||++++|+|++++||++... ...+|+. .. .....
T Consensus 112 -------~~a~a~N~G~~~al~~A---~gd~i~flD~D~i~~~d~~~~~---~~~~p~~---------~~---~~~~~-- 164 (287)
T 2fy7_A 112 -------NRAKLLNVGFQEALKDY---DYTCFVFSDVDLIPMNDHNAYR---CFSQPRH---------IS---VAMDK-- 164 (287)
T ss_dssp -------CHHHHHHHHHHHHHHHS---CCCEEEEECTTEEESBTTSCCS---CCSSCEE---------CC---CEEGG--
T ss_pred -------chhhhhhhHHHHHHHhC---CCCEEEEECCCcccCCCcceEe---cCCCCce---------EE---Eeecc--
Confidence 2567788888 777 9999999999999999952100 0011110 00 00000
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEecc-----Ccc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGD-----LGV 313 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~-----~~~ 313 (534)
.. + . .....+.|+++++||++++++|||++... .||.|++.|+.++|+++...+. ...
T Consensus 165 -~~----~------~---~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i 230 (287)
T 2fy7_A 165 -FG----F------S---LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHI 230 (287)
T ss_dssp -GT----T------S---CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEEC
T ss_pred -cc----c------C---CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEE
Confidence 00 0 0 01123568999999999999999998755 5999999999999999884432 222
Q ss_pred c-------ccCCcCHHHHHHHHhhhccchhhHH
Q 044519 314 K-------NELPSTFKAYRYQQHRWSCGPSNLF 339 (534)
Q Consensus 314 ~-------~~~p~t~~~~~~Qr~RW~~G~~~~~ 339 (534)
+ ...|..++...+|+.||.++.++.+
T Consensus 231 ~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 231 RHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp C---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred ecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 2 2457788899999999999987654
|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5e-19 Score=179.92 Aligned_cols=197 Identities=14% Similarity=0.023 Sum_probs=137.1
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHc--CCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACG--LSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~--q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
..|+|||+||+|||++.|.+||+|+.+ |+||....+|+|+|+|+|+|.+ ++++.. . +++.
T Consensus 92 ~~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~---------i~~~~~-------~--~v~~ 153 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAG---------VAASHG-------A--EVYS 153 (387)
T ss_dssp HTCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHH---------HHHHTT-------C--EEEE
T ss_pred CCCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHH---------HHHHhC-------c--hhcc
Confidence 468999999999999999999999987 4665332233366779999887 665431 1 2222
Q ss_pred ------ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC------
Q 044519 167 ------RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNAD------ 233 (534)
Q Consensus 167 ------r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~------ 233 (534)
+.+.+.||+.|+|.|++.| +||||+++|+|+. ++|++|.+++..+.++|++++|.|........
T Consensus 154 ~~~~~i~~~~n~G~g~A~n~G~~~A---~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~ 230 (387)
T 3f1y_A 154 ENELMSGYGDAHGKGDAMWRALSVT---RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEE 230 (387)
T ss_dssp GGGTTGGGCSCCSHHHHHHHHTTTC---CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CC
T ss_pred cceeEecCCccCCHHHHHHHHHHhc---CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeecccccccccccc
Confidence 2235667999999999999 9999999999999 89999999999997788999999865422111
Q ss_pred --CchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHH-hCCCE-EEEec
Q 044519 234 --ECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS-LKGWK-FVFVG 309 (534)
Q Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~-~~G~k-i~~~~ 309 (534)
.+...+... ...+.. ............|++.++||++++++ +++ ...++|.++..++. +.|++ +..+|
T Consensus 231 ~~~g~v~~~~~---~~l~~~---~~~~l~~~~d~~sG~~a~rR~~l~~i-~f~-~gyg~e~ell~~~~~~~G~~~I~eVp 302 (387)
T 3f1y_A 231 DGGGRVTELTA---KPLFNL---FYPELAGFVQPLAGEFVADRELFCSI-PFL-TGYAVETGIMIDVLKKVGLGAMAQVD 302 (387)
T ss_dssp BCCSHHHHHTH---HHHHHH---HCGGGTTCSCTTCSCEEEEHHHHTTS-CEE-CSTTHHHHHHHHHHHHHCGGGEEEEE
T ss_pred ccCCchhhhhH---HHHHHH---HhHhhccccccccccEEEEHHHHHhC-CCC-CCcchHHHHHHHHHHhcCCCeEEEEe
Confidence 111111100 000000 00111122333577889999999999 675 45788999999885 56987 99998
Q ss_pred cCccc
Q 044519 310 DLGVK 314 (534)
Q Consensus 310 ~~~~~ 314 (534)
-....
T Consensus 303 i~~~~ 307 (387)
T 3f1y_A 303 LGERQ 307 (387)
T ss_dssp EEECC
T ss_pred cceee
Confidence 76643
|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.4e-18 Score=162.79 Aligned_cols=184 Identities=10% Similarity=0.015 Sum_probs=121.2
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcC-CCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGL-SWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q-~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|.+|| ||+||+++.+++||+|+.+. ..+.. .+|+|+||++.+ .
T Consensus 13 ~~~~~iSI-I~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d--~----------------------------- 59 (249)
T 2nxv_A 13 ESTLMFSV-CSLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGN--Q----------------------------- 59 (249)
T ss_dssp CCCCSEEE-EEEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSC--S-----------------------------
T ss_pred CCcceEEE-EEeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCC--c-----------------------------
Confidence 34678997 47799999999999977642 21222 567677774421 0
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc----CCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE----NKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~----~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
.|.+.|+|.|++.| +|||++++|+|+.++|++|+++++.+++ +|++++++......+...... ....
T Consensus 60 -----~g~a~a~N~Gi~~A---~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~ 130 (249)
T 2nxv_A 60 -----FHGFSWHKQMLPRC---KGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQA 130 (249)
T ss_dssp -----CCTTTHHHHHGGGC---CSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCE
T ss_pred -----ccHHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eecc
Confidence 13578999999999 9999999999999999999999999865 499988875433222111000 0000
Q ss_pred hhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC---ccchHHHHHHHHhCCCEEEEeccCcccccC
Q 044519 243 MSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT---TVEDMDLAVRASLKGWKFVFVGDLGVKNEL 317 (534)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 317 (534)
.............+..........|+++++||++ .|||++.. ..||.|++.|+.++|+++.+.|.. ++|..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 131 LHISDVFGNDRRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEEEETTEEEEEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred cccCCccccccccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 0000000000000011111223579999999999 78899632 358999999999999999999865 55544
|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.6e-15 Score=149.73 Aligned_cols=194 Identities=12% Similarity=0.050 Sum_probs=121.9
Q ss_pred EEEeccCchHHHHHHHHHHH-cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHh-hcCccEEEEEec-CC-
Q 044519 95 VQIPMYNEKEVYKLSIGAAC-GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI-EKGVNVKYETRK-NR- 170 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~-~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~r~-~~- 170 (534)
|+||+ ||+ .+..+++++. .+.+|..++ |+|+|||+|+|.+ ++++.+++.+ +.+.++...... ..
T Consensus 4 VIiP~-~eE-~I~~vl~~l~~~~~~~~~EI-IVVDDGStD~T~e---------ia~~la~~~~~~~g~~vi~~~~~r~~~ 71 (397)
T 2bo4_A 4 VVFPF-KHE-HPEVLLHNVRVAAAHPRVHE-VLCIGYERDQTYE---------AVERAAPEISRATGTPVSVRLQERLGT 71 (397)
T ss_dssp EEEEC-CSS-CHHHHHHHHHHHHHSTTCCE-EEEEESSCCHHHH---------HHHHHHHHHHHHHSCCEEEEECCCCSS
T ss_pred EEEeC-Ccc-CHHHHHHHHHHhccCCCeEE-EEEECcCCccHHH---------HHHHhhhhcccccCCeEEEEecccCCC
Confidence 45555 443 4777777774 234555554 4477889999998 7776666654 445555443212 12
Q ss_pred -CCCChhHHHHHH----HhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH-hh
Q 044519 171 -NGYKAGALKEGL----EKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ-EM 243 (534)
Q Consensus 171 -~g~Ka~aln~gl----~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~-~~ 243 (534)
+.||+.|++.|+ +++ +||+++++|||.. .+|+++.++++.+. + ++++|.|...- ....+...+.. ..
T Consensus 72 ~n~GkG~Al~~G~~~Al~~a---~gd~vv~mDADlq~~~P~~i~~Ll~~l~-~-g~D~V~g~~~r-~~~~~~~~~~~~~~ 145 (397)
T 2bo4_A 72 LRPGKGDGMNTALRYFLEET---QWERIHFYDADITSFGPDWITKAEEAAD-F-GYGLVRHYFPR-ASTDAMITWMITRT 145 (397)
T ss_dssp SSSSHHHHHHHHHHHHHHHC---CCSEEEECCTTCSSCCHHHHHHHHHHHH-T-TCSEEEEECCC-CTTSCHHHHHTHHH
T ss_pred CCCCHHHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCHHHHHHHHHHHH-c-CCCEEEEEecc-ccCCcHHHHHHHHH
Confidence 567999999999 666 9999999999997 79999999999883 3 47777774221 11122222211 00
Q ss_pred hcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCC----CCCCccchHHHHHHHHhCCCEEEEeccC
Q 044519 244 SLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGW----KDRTTVEDMDLAVRASLKGWKFVFVGDL 311 (534)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~----~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 311 (534)
-....+...+.. ......++..++||++++++... .....+.|.++..++.++|+++..+|-.
T Consensus 146 ll~~~~~~~~~~-----~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 146 GFALLWPHTELS-----WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp HHHHHCTTSSGG-----GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred HHHHHHHHhhcc-----ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 000011111100 11111344558999999987321 2344567999999999999999998843
|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2.2e-10 Score=110.69 Aligned_cols=109 Identities=13% Similarity=-0.021 Sum_probs=77.3
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
...++|||||||||+.. +++++++|.+.+.++ |+|+|+|+|.+... .++++++++. .+.++.+++..
T Consensus 51 i~~klSIVVPvYNEe~~---lLesVl~qi~~d~eI-IlVdDGS~D~s~~e------~dil~~~~~~---~~~ri~viHQk 117 (391)
T 2wvl_A 51 VLEQTAIVVPTRNERLK---LLEGVLSGIPHEALI-LVASNSSPDRFQME------RDLLEEFAHL---TERPALIFHQK 117 (391)
T ss_dssp HHTTEEEEEEESSCCHH---HHHHHHHTSCTTSEE-EEEECCCHHHHHHH------HHHHHHHHHH---TTCCEEEEETT
T ss_pred HHhceEEEEeccCcHHH---HHHHHHhcCCCCceE-EEEECCCCCChHhH------HHHHHHHHhh---cccceEEEecc
Confidence 45789999999999964 699999999876443 33667788887430 0255555432 24567777531
Q ss_pred ---------------------CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH
Q 044519 169 ---------------------NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 169 ---------------------~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
..+.||+.++-.|+..|...++|||.|+|||...+.+..+.+
T Consensus 118 n~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv 180 (391)
T 2wvl_A 118 DPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV 180 (391)
T ss_dssp CHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH
T ss_pred ChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH
Confidence 122358888888998874458999999999999977766554
|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=4.9e-09 Score=104.50 Aligned_cols=111 Identities=17% Similarity=0.113 Sum_probs=70.2
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHc-CCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACG-LSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~-q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
.++||+||+|||++.+ +..+++ ..+ ..+ +|+|+|+|+|++-+ |....+++++.++.. .....+++.++
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i~~-~~e-IIvVDDgSrD~tD~---~~~~~~~l~~~~~~~---~~~~~Vl~~~~ 119 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAIPH-KCP-IIIVSNSKREGPNR---YKLEVDLIRHFYNLT---HSKIIMIHQKD 119 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHSCT-TSC-EEEEECCCCSSSCH---HHHHHHHHHHHHHHH---CCCEEEEETTC
T ss_pred CCEEEEEecCcccHHH---HHHHHHcCCC-CcE-EEEEECcCcccccc---hhhHHHHHHHHhhcc---ccceEEEecCC
Confidence 4799999999999543 444433 233 233 44467778776622 000002454444432 23344444432
Q ss_pred ----------------------CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 170 ----------------------RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 170 ----------------------~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++ ||..|+-.|+.+|...++|+|+++|||. ..|..+.+.+..+
T Consensus 120 p~v~~~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy 184 (394)
T 2zu9_A 120 PGLAKAFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDY 184 (394)
T ss_dssp HHHHHHHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHH
T ss_pred cchhHHhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHh
Confidence 24 6999999999887444899999999999 6788887777665
|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.4e-09 Score=104.87 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=79.1
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK-- 168 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~-- 168 (534)
+.++|+|++||.++ ++++|+|+++|+.+....+|+|.||+++++++ ++++++. .++.++..+
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~--------~vi~~~~-------~~I~~~~~~d~ 65 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETA--------QVIASYG-------SAVTHIRQPDL 65 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHH--------HHHHTTG-------GGSEEEECSCC
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHH--------HHHHHcC-------CceEEEEcCCc
Confidence 56899999999999 99999999999855444445567665544444 3554321 234444211
Q ss_pred ------CCCCCCh----------hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHHhcCCcEEEEeee
Q 044519 169 ------NRNGYKA----------GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYLLENKELGLVQAR 226 (534)
Q Consensus 169 ------~~~g~Ka----------~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~ 226 (534)
+++.|-+ .++|.+++.+ ++|+++++|+|++++||+++.+ .+.+++|+.+.++++.
T Consensus 66 ~~~~~~~~N~g~~~y~~ia~h~~~al~~vf~~~---~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~ 139 (343)
T 1fo8_A 66 SNIAVQPDHRKFQGYYKIARHYRWALGQIFHNF---NYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW 139 (343)
T ss_dssp CCCCCCTTCGGGHHHHHHHHHHHHHHHHHHTTS---CCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC
T ss_pred cccccchhhcCcccchhHhHHHHHHHHHHHHhc---cCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc
Confidence 1111111 3555556555 8999999999999999999655 4455678999888764
|
| >3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.44 E-value=6.2e-07 Score=84.15 Aligned_cols=180 Identities=13% Similarity=0.111 Sum_probs=116.8
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAAC----GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
.-+|+||||-+|.++.+...|..+. +|.- ...|+|++...+..
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~~~------------------------------ 96 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDRFR------------------------------ 96 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSSSC------------------------------
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCCCc------------------------------
Confidence 3489999999999988888876653 3532 34566666542211
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~ 245 (534)
-.++..+|.|+..| .++.|++++-|.|.+|..|.... ..|+. ....+...+.
T Consensus 97 ------FNRa~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd~n~Y------~c~~~----~~P~Hls~~~----------- 148 (287)
T 3lw6_A 97 ------FNRASLINVGFQFA-SDVYDYIAMHDVDLLPLNDNLLY------EYPSS----LGPLHIAGPK----------- 148 (287)
T ss_dssp ------CCHHHHHHHHHHHS-CTTCCEEEEECTTEEECCTTSCC------CCCCT----TCCEESSCTT-----------
T ss_pred ------cchhheecccHHHH-hccCCEEEEecccccccCCCccc------cCCCC----CCceEEeecc-----------
Confidence 12777899999987 34689999999999986542110 01100 0111111100
Q ss_pred ccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccC-c-----cc--
Q 044519 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDL-G-----VK-- 314 (534)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~-~-----~~-- 314 (534)
.++. .....+.|...+++++.+.++|||++... .||.|+..|+..+|.++...+.. . ..
T Consensus 149 -~~~~---------~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~ 218 (287)
T 3lw6_A 149 -LHPK---------YHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHI 218 (287)
T ss_dssp -TCSS---------CCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEEC
T ss_pred -ccCC---------CCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEecc
Confidence 0000 11233568999999999999999998655 79999999999999998766542 1 11
Q ss_pred c-------cCCcCHHHHHHHHhhhccchhhHHh
Q 044519 315 N-------ELPSTFKAYRYQQHRWSCGPSNLFS 340 (534)
Q Consensus 315 ~-------~~p~t~~~~~~Qr~RW~~G~~~~~~ 340 (534)
+ +.|..+.....++.||..+.+..++
T Consensus 219 hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl~ 251 (287)
T 3lw6_A 219 HNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNVK 251 (287)
T ss_dssp CCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGCC
T ss_pred ccccccCCcccchhhhhhhhcEEccCCCCeeeE
Confidence 1 2234556667888999888876543
|
| >2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0027 Score=56.12 Aligned_cols=130 Identities=11% Similarity=0.055 Sum_probs=78.4
Q ss_pred hcCccEEEEEecCCCCCChhHHHHHHHhhh-ccCCcEEEEecCC---CCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecC
Q 044519 157 EKGVNVKYETRKNRNGYKAGALKEGLEKQY-VKDCQFVVIFDAD---FQPDEDFLWRTIPYLLENKELGLVQARWKFVNA 232 (534)
Q Consensus 157 ~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~-~~~~d~v~~lDaD---~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~ 232 (534)
+.+..++.... ..--+.|+|..+.... ..++|+++++||| ...+|+.+.+++.. +.++|.|.......
T Consensus 23 ~~gi~~~l~~~---~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~-----g~DVV~GsYp~K~~ 94 (203)
T 2c0n_A 23 KNDIEYVILSR---RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE-----GYDVVCGYYYLKTL 94 (203)
T ss_dssp HTTCCEEEECC---CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHHH-----TCSEEEEECBCTTS
T ss_pred hCCCeEEEEcc---ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHhC-----CCCEEEEEeeccCC
Confidence 35677766644 3336677777776632 2478999999999 88899999998832 45566665433221
Q ss_pred CCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC--CC-------CCCCccchHHHHHHHHhCCC
Q 044519 233 DECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG--GW-------KDRTTVEDMDLAVRASLKGW 303 (534)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G--g~-------~~~~~~ED~~l~~rl~~~G~ 303 (534)
+ . .+.. ...+... .. .......++.++++||++++.+- .| ..+..+||..++..+..+|+
T Consensus 95 ~-~-~s~~-----a~~y~~~--i~--~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~ 163 (203)
T 2c0n_A 95 R-G-YSVY-----RKDWEKE--IF--DGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTY 163 (203)
T ss_dssp S-S-BSEE-----SSSBCSS--CC--CEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEE
T ss_pred C-c-cchH-----HHHHHHh--cc--CceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccc
Confidence 1 1 0000 0001000 00 01222345678899999999872 22 12456899999999998887
Q ss_pred EE
Q 044519 304 KF 305 (534)
Q Consensus 304 ki 305 (534)
.+
T Consensus 164 ~~ 165 (203)
T 2c0n_A 164 AL 165 (203)
T ss_dssp EE
T ss_pred cc
Confidence 76
|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.065 Score=50.52 Aligned_cols=183 Identities=11% Similarity=0.091 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHH
Q 044519 104 EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLE 183 (534)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~ 183 (534)
..+..+++.+.+.. -+++.| +.| ++.. ++.++++ +.++.+. .++..+|.++ +..+++
T Consensus 35 Pli~~~l~~l~~~~--i~~VvV-vt~---~~~i------------~~~~~~~---g~~v~~~-~~~~~~Gt~~-i~~a~~ 91 (256)
T 3tqd_A 35 PMIQHVYESAIKSG--AEEVVI-ATD---DKRI------------RQVAEDF---GAVVCMT-SSDHQSGTER-IAEAAV 91 (256)
T ss_dssp EHHHHHHHHHHHTT--CSEEEE-EES---CHHH------------HHHHHHT---TCEEEEC-CTTCCSHHHH-HHHHHH
T ss_pred hHHHHHHHHHHhCC--CCEEEE-ECC---HHHH------------HHHHHHc---CCeEEEe-CCCCCCcHHH-HHHHHH
Confidence 47888999887754 234433 443 2222 2333332 4555443 3333334444 566666
Q ss_pred hhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcEEEEeeeeEeec----CCCchhhH-hHhhhcccchhhhhh--c
Q 044519 184 KQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKELGLVQARWKFVN----ADECLMTR-LQEMSLDYHFSVEQE--V 255 (534)
Q Consensus 184 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n----~~~~~~~~-~~~~~~~~~~~~~~~--~ 255 (534)
.....+.|.++++++|. ..+++.+.++++.+.++++.+++.......+ .+.+...- ...-.....|..... .
T Consensus 92 ~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~ 171 (256)
T 3tqd_A 92 ALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWG 171 (256)
T ss_dssp HTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCC
T ss_pred HhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCC
Confidence 53112579999999998 5689999999999865554433322221111 01111000 000000000100000 0
Q ss_pred cccc--------CccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEecc
Q 044519 256 GSST--------CQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGD 310 (534)
Q Consensus 256 ~~~~--------~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~ 310 (534)
+... .....-+....+||+++++....++...+ .|..| ..|+..+|+++.....
T Consensus 172 r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e~le-qlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 172 RDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALE-QLRILWHGGRIHMVVA 235 (256)
T ss_dssp TTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCT-THHHHHTTCCCEEEEC
T ss_pred CcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchhhhH-HHHHHHCCCeEEEEEe
Confidence 0000 00111245578999999999876765432 23333 2577889999877653
|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
Probab=94.61 E-value=0.26 Score=46.56 Aligned_cols=180 Identities=14% Similarity=0.095 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHH
Q 044519 104 EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLE 183 (534)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~ 183 (534)
..+..+++.+.+.. -++++| +.| ++..+ +.++++ +.++.+. ++...+|.++ +..+++
T Consensus 44 Pmi~~~l~~l~~~~--i~~IvV-~t~---~~~i~------------~~~~~~---g~~v~~~-~~~~~~Gt~~-i~~~~~ 100 (264)
T 3k8d_A 44 PMIVHVLERARESG--AERIIV-ATD---HEDVA------------RAVEAA---GGEVCMT-RADHQSGTER-LAEVVE 100 (264)
T ss_dssp EHHHHHHHHHHHTT--CSEEEE-EES---CHHHH------------HHHHHT---TCEEEEC-CTTCCSHHHH-HHHHHH
T ss_pred EHHHHHHHHHHhCC--CCEEEE-ECC---HHHHH------------HHHHHc---CCEEEEe-cCCCCCCHHH-HHHHHH
Confidence 37888999888764 244433 443 22222 233332 4444332 3333444444 555665
Q ss_pred hhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc--EEEEeeeeEe----ecCCC-chh-h-HhHhhhcccchhh-h
Q 044519 184 KQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE--LGLVQARWKF----VNADE-CLM-T-RLQEMSLDYHFSV-E 252 (534)
Q Consensus 184 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~--v~~V~~~~~~----~n~~~-~~~-~-~~~~~~~~~~~~~-~ 252 (534)
.....+.|+++++++|. ..+++.+.++++.+. +++ +.....+..- .|++. ... . ......+...-.. .
T Consensus 101 ~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~-~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~~l~fsr~~ip~~ 179 (264)
T 3k8d_A 101 KCAFSDDTVIVNVQGDEPMIPATIIRQVADNLA-QRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWD 179 (264)
T ss_dssp HHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHH-TSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSBEEEEESSCCSCC
T ss_pred HhccCCCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCCEEEEEEEcCCHHHccCCCceEEEECCCCeEEEEecCCCCCC
Confidence 43112579999999998 559999999999984 433 3333332210 01100 000 0 0000000000000 0
Q ss_pred hhc----ccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEe
Q 044519 253 QEV----GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 253 ~~~----~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~ 308 (534)
+.. ..........+....+||++.+++.-.++...+ .|..+. .|+..+|+++...
T Consensus 180 r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE~~e~leq-lr~le~G~~I~~~ 240 (264)
T 3k8d_A 180 RDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQ-LRVLWYGEKIHVA 240 (264)
T ss_dssp HHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHHHHHTCTT-HHHHHTTCCEEEE
T ss_pred CccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhhhHHHHHH-HHHHHCCCceEEE
Confidence 000 000001112356678999999999766654322 233332 4677899999875
|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
Probab=93.96 E-value=0.17 Score=47.50 Aligned_cols=185 Identities=12% Similarity=0.116 Sum_probs=92.3
Q ss_pred CchHHHHHHH-HHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHH
Q 044519 101 NEKEVYKLSI-GAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALK 179 (534)
Q Consensus 101 ne~~~l~~~L-~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln 179 (534)
+....+..++ +++.+.. -++++| +.|+ +.+. +.+++ .+.++.+. ++...+|. +++.
T Consensus 24 ~GkPli~~~i~~~~~~~~--~~~vvV-vt~~---~~i~------------~~~~~---~g~~v~~~-~~~~~~Gt-~~i~ 80 (253)
T 4fcu_A 24 HDRPMILRVVDQAKKVEG--FDDLCV-ATDD---ERIA------------EICRA---EGVDVVLT-SADHPSGT-DRLS 80 (253)
T ss_dssp TTEEHHHHHHHHHHTCTT--CCEEEE-EESC---HHHH------------HHHHT---TTCCEEEC-CTTCCCHH-HHHH
T ss_pred CCeEhHHHHHHHHHHhcC--CCEEEE-ECCH---HHHH------------HHHHH---cCCeEEEe-CCCCCChH-HHHH
Confidence 3445788999 8887643 344433 4442 2222 23332 24444332 33333333 3566
Q ss_pred HHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc--EEEEeeeeE----eecCCCc-hhhHh--Hhhhcccch
Q 044519 180 EGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE--LGLVQARWK----FVNADEC-LMTRL--QEMSLDYHF 249 (534)
Q Consensus 180 ~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~--v~~V~~~~~----~~n~~~~-~~~~~--~~~~~~~~~ 249 (534)
.+++.....+.|+++++++|. ..+++.+.+++..+.++++ ++.+..+.. ..|++.- ....- ....+....
T Consensus 81 ~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d~~g~~l~fsr~~ 160 (253)
T 4fcu_A 81 EVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRAT 160 (253)
T ss_dssp HHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECTTSBEEEEESSC
T ss_pred HHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccEEEECCCCeEEEecCCC
Confidence 777665112469999999998 6699999999999866654 333333211 1122110 00000 000000000
Q ss_pred hhhhhccccc-----CccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEec
Q 044519 250 SVEQEVGSST-----CQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 250 ~~~~~~~~~~-----~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 309 (534)
.......... ......+....+||++.+++...++...+ .|..+ ..|+.++|+++....
T Consensus 161 ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~le~~e~le-~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 161 IPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLE-QLRVLENGHRIAIAV 226 (253)
T ss_dssp CSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCT-THHHHHTTCCEEEEE
T ss_pred CCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCcccchhHHH-HHHHHHCCCceEEEE
Confidence 0000000000 01111255678999999999876654322 22222 235568899987654
|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
Probab=93.46 E-value=0.29 Score=45.82 Aligned_cols=188 Identities=15% Similarity=0.089 Sum_probs=92.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|..+ ...+..+++++.+.. -++++| +.| ++ .+++.+++ .+.++.+. .++..+|.++
T Consensus 22 ~~i~G-kPli~~~l~~l~~~~--~~~ivV-v~~---~~------------~i~~~~~~---~g~~v~~~-~~~~~~Gt~~ 78 (252)
T 3oam_A 22 ADIGG-KPMIQWVYEQAMQAG--ADRVII-ATD---DE------------RVEQAVQA---FGGVVCMT-SPNHQSGTER 78 (252)
T ss_dssp CEETT-EEHHHHHHHHHHHTT--CSEEEE-EES---CH------------HHHHHHHH---TTCEEEEC-CTTCCSHHHH
T ss_pred eeECC-EEHHHHHHHHHHhCC--CCeEEE-ECC---HH------------HHHHHHHH---cCCEEEEc-CCCCCCcHHH
Confidence 34434 358889999988765 244433 443 22 22233333 24555443 3333344554
Q ss_pred HHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC-CcEEEEeeeeE----eecCCCc-hhhH--hHhhhccc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN-KELGLVQARWK----FVNADEC-LMTR--LQEMSLDY 247 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~-~~v~~V~~~~~----~~n~~~~-~~~~--~~~~~~~~ 247 (534)
+..+++.....+.|.++++++|. .++++.+.++++.+.++ .++.....+.. +.+++.. .... .....+..
T Consensus 79 -~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g~v~~fsr 157 (252)
T 3oam_A 79 -LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSR 157 (252)
T ss_dssp -HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTTSBEEEEES
T ss_pred -HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCCCeEEEEeC
Confidence 44455442112578999999998 56999999999988543 23444433321 1111000 0000 00000000
Q ss_pred chhhhhhcc----cc-cCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEec
Q 044519 248 HFSVEQEVG----SS-TCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 248 ~~~~~~~~~----~~-~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 309 (534)
....+.... .. .......+....+|+++.+++.-....... .|..+. .|+..+|.++...+
T Consensus 158 ~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~-lr~l~~G~~i~~~~ 225 (252)
T 3oam_A 158 ATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQ-LRVLWHGEKIHVAV 225 (252)
T ss_dssp SCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTT-HHHHHTTCCEEEEE
T ss_pred CCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhHH-HHHHHCCCeEEEEE
Confidence 000000000 00 011122456788999999998755543222 333332 35668899987753
|
| >3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* | Back alignment and structure |
|---|
Probab=92.51 E-value=1.3 Score=41.49 Aligned_cols=106 Identities=14% Similarity=0.076 Sum_probs=58.5
Q ss_pred CCCCcEEEEEeccCchHH---HHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 88 KSYPMVLVQIPMYNEKEV---YKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~---l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
+..|.|-||-|+|..... +.+.-..+ .+- |+ +.=+|++|+.+.+.. ..++++ + -+..-++
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtRLa~TL-~~V-p~--L~WIVVEd~~~~t~~------va~lL~----r---sGl~y~H 80 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVRLSQTL-SLV-PR--LHWLLVEDAEGPTPL------VSGLLA----A---SGLLFTH 80 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHHHHHHH-TTS-SS--EEEEEEESSSSCCHH------HHHHHH----H---HCSEEEE
T ss_pred CCCCeEEEEeCCCCCcchhHHHHHHHHHH-hcC-Cc--eEEEEEcCCCCCCHH------HHHHHH----H---cCCceEE
Confidence 578999999999999733 33333333 322 43 444466664432222 002433 2 2555555
Q ss_pred EEecCCCCCC-------------hhHHHHHHHhhh--------cc------CCcEEEEecCCCCCCHHHHHHH
Q 044519 165 ETRKNRNGYK-------------AGALKEGLEKQY--------VK------DCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 165 ~~r~~~~g~K-------------a~aln~gl~~a~--------~~------~~d~v~~lDaD~~~~pd~L~~l 210 (534)
+.-..+...| ..++|.|++... .. ..-+|.|.|+|...+-+..+++
T Consensus 81 L~~~~p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 81 LVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp EECCCC-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred eccCCCccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 5333222211 467899998873 11 2358899999999998887764
|
| >2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.74 E-value=1.7 Score=40.00 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=60.0
Q ss_pred CCcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 90 YPMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 90 ~P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.|.|-+|-|+|.... .+.+.-..+. +- |+ +.=+|++|+.+.+. .+.+..+ .-|..-+++.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~V-p~--l~WIVVEd~~~~~~----------~v~~lL~---~sgl~y~HL~ 64 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFR-QV-AQ--LHWILVEDAAARSE----------LVSRFLA---RAGLPSTHLH 64 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHT-TS-TT--EEEEEEESSSSCCH----------HHHHHHH---HSCSCEEEEE
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHh-cC-Cc--eEEEEEcCCCCCCH----------HHHHHHH---HcCCceEEEe
Confidence 688999999999973 3344333333 22 44 44446665443221 2222222 2355555554
Q ss_pred ecCCCCC-------ChhHHHHHHHhhhcc------CCcEEEEecCCCCCCHHHHHHH
Q 044519 167 RKNRNGY-------KAGALKEGLEKQYVK------DCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 167 r~~~~g~-------Ka~aln~gl~~a~~~------~~d~v~~lDaD~~~~pd~L~~l 210 (534)
-+.+... -..++|.|++..... ..-+|.|.|+|...+-+...++
T Consensus 65 ~~~~~~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 65 VPTPRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp CCCCCC----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred cCCccccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 3321111 236789999775322 2468899999999998877764
|
| >1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* | Back alignment and structure |
|---|
Probab=91.18 E-value=0.63 Score=44.22 Aligned_cols=116 Identities=10% Similarity=0.055 Sum_probs=70.6
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
.....|++|-+|+..+.+.+.++.+.+..+- . +|+|+ .+..++..+ ... .........++++..
T Consensus 26 ~~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v--~-~IvVvWn~~~~~pp~--------~~~----~~~~~~~vpv~v~~~ 90 (293)
T 1omz_A 26 ALDSFTLIMQTYNRTDLLLRLLNHYQAVPSL--H-KVIVVWNNVGEKGPE--------ELW----NSLGPHPIPVIFKPQ 90 (293)
T ss_dssp CTTCEEEEEEESSCHHHHHHHHHHHTTSTTE--E-EEEEEECCTTCCCTH--------HHH----HHTCCCSSCEEEEEC
T ss_pred CCCceEEEEEeecccHHHHHHHHHHhcCCCC--C-eEEEEeCCCCCCCCh--------hhc----cccCCCCccEEEEeC
Confidence 3458999999999989999999888665432 2 23344 443222222 111 111122356766633
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeee
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQAR 226 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~ 226 (534)
..+ .-.++-.-.... +.|-|+.+|+|..++.+.|+.......++|+- +|+-.
T Consensus 91 -~~n--sLnnRF~p~~~i---~T~AVLslDDDv~l~~~el~faF~vWr~~PdR-lVGf~ 142 (293)
T 1omz_A 91 -TAN--KMRNRLQVFPEV---ETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ-IIGFV 142 (293)
T ss_dssp -SSC--CGGGGGSCCTTC---CSSEEEEECTTEEECHHHHHHHHHHHTTSTTS-EEESC
T ss_pred -CCC--chhhccCCCccC---CcCEEEEEcCCCCCCHHHHHHHHHHHHHCccc-eecCc
Confidence 222 111221122333 89999999999999999999988888778873 44433
|
| >1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* | Back alignment and structure |
|---|
Probab=90.77 E-value=1.3 Score=40.83 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=59.2
Q ss_pred CCcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 90 YPMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 90 ~P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.|.|-+|-|+|.... .+.+.-..+ .+ -|+ +.=+|++|+.+.+.. ..++++ + -|..-+++.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~-Vp~--L~WIVVEd~~~~t~~------va~lL~----~---sgl~y~HL~ 64 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LH-VPN--LHWLVVEDAPRRTPL------TARLLR----D---TGLNYTHLH 64 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TT-SSS--EEEEEEESSSSCCHH------HHHHHH----H---HCCEEEEEE
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-cc-CCc--eEEEEEeCCCCCCHH------HHHHHH----H---cCCceEEee
Confidence 689999999999973 344444444 22 254 444466654432222 002433 2 255545553
Q ss_pred ecCC----------CCC---ChhHHHHHHHhhhc------cCCcEEEEecCCCCCCHHHHHHH
Q 044519 167 RKNR----------NGY---KAGALKEGLEKQYV------KDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 167 r~~~----------~g~---Ka~aln~gl~~a~~------~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
-+.+ +.. -...+|.|++.... ...-+|.|.|+|...+-+..+++
T Consensus 65 ~~~p~~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em 127 (253)
T 1v84_A 65 VETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 127 (253)
T ss_dssp CCCCHHHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred cCCCccccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence 3211 000 13478999987632 13468899999999999887774
|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=84.90 E-value=5.3 Score=36.19 Aligned_cols=89 Identities=10% Similarity=0.048 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe-cCCCCCChhHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR-KNRNGYKAGALKE 180 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r-~~~~g~Ka~aln~ 180 (534)
....++.+++++.+. . +++.| +.++ + ... +.+++ . +.++.. +...+|.+++. .
T Consensus 26 g~pli~~~l~~~~~~--~-~~i~v-~~~~--~-~i~------------~~~~~----~--~~~~~~~~~~~~g~~~~~-~ 79 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT--G-ERVIL-ATDS--E-RVK------------EVVED----L--CEVFLTPSDLPSGSDRVL-Y 79 (234)
T ss_dssp TEEHHHHHHHHHHTT--T-SCEEE-EESC--H-HHH------------HHHTT----T--SEEEECCTTCCSHHHHHH-H
T ss_pred CEEHHHHHHHHHHHh--C-CEEEE-ECCh--H-HHH------------HHHHh----c--eEEEECCcccccchHHHH-H
Confidence 347889999999876 2 34433 4433 2 222 22222 1 233322 22344466555 4
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE 219 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~ 219 (534)
+++.. +.|+++++++|. ..+++.+.++++.+.++++
T Consensus 80 ~~~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 80 VVRDL---DVDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp HHTTC---CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred HHHhC---CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 56554 679999999999 8899999999988754444
|
| >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 | Back alignment and structure |
|---|
Probab=83.08 E-value=12 Score=34.41 Aligned_cols=100 Identities=14% Similarity=0.059 Sum_probs=59.2
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....+..+++++.+.... +++.| |++....+ .+++..+++. ....+.++. . ..+..+++..
T Consensus 30 ~Gkpll~~~l~~~~~~~~~-~~ivv-v~~~~~~~------------~~~~~~~~~~-~~~~~~~~~-~--~~~~~~sv~~ 91 (246)
T 3f1c_A 30 NGKPIIVHTVEKFILNTRF-DKILI-SSPKEWMN------------HAEDNIKKYI-SDDRIVVIE-G--GEDRNETIMN 91 (246)
T ss_dssp TTEEHHHHHHHHHHTCTTC-SEEEE-EECGGGHH------------HHHHHHHHHC-CCTTEEEEE-C--CSSHHHHHHH
T ss_pred CCeeHHHHHHHHHHcCCCC-CEEEE-EeCHHHHH------------HHHHHHHHhC-CCCCEEEEC-C--CCchHHHHHH
Confidence 3447899999999876432 34433 44432111 1222223331 122454442 1 1235677888
Q ss_pred HHHhhhc----cCCcEEEEecCCC-CCCHHHHHHHHHHHhcCC
Q 044519 181 GLEKQYV----KDCQFVVIFDADF-QPDEDFLWRTIPYLLENK 218 (534)
Q Consensus 181 gl~~a~~----~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~ 218 (534)
|++.... .+.|+++++|+|. .++++.+.++++.+.+++
T Consensus 92 al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~ 134 (246)
T 3f1c_A 92 GIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG 134 (246)
T ss_dssp HHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS
T ss_pred HHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 8876521 1368999999996 669999999999885543
|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
Probab=82.55 E-value=27 Score=31.36 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=31.0
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcC
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLEN 217 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 217 (534)
+++..|++.. .+.|.++++++|.- .+++.+.++++.+.++
T Consensus 83 ~~v~~al~~~--~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 83 DAIVEFLNYH--NEVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp HHHHHHHTTC--TTCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 5667777654 35799999999985 5899999999987444
|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
Probab=82.37 E-value=4.8 Score=35.28 Aligned_cols=91 Identities=18% Similarity=0.129 Sum_probs=54.0
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+.. -+++.| |.+.. ++... +.+. ..++.++..+....|-.+++..
T Consensus 29 ~g~pll~~~l~~l~~~~--~~~i~v-v~~~~-~~~~~------------~~~~-----~~~~~~~~~~~~~~g~~~~i~~ 87 (197)
T 2wee_A 29 RDTTVLGATLDVARQAG--FDQLIL-TLGGA-ASAVR------------AAMA-----LDGTDVVVVEDVERGCAASLRV 87 (197)
T ss_dssp TTEEHHHHHHHHHHHTT--CSEEEE-EECTT-HHHHH------------HHSC-----CTTSEEEECC----CCHHHHHH
T ss_pred CCccHHHHHHHHHHhcC--CCcEEE-EeCCC-HHHHH------------HHhc-----cCCCEEEECCCcccCHHHHHHH
Confidence 34478899999997754 234333 44332 22222 2211 1234444333222357788888
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHH
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPY 213 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~ 213 (534)
|++.. ..+.|.++++++|. .++++.++++++.
T Consensus 88 al~~~-~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 88 ALARV-HPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp HHTTS-CTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHh-cccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 88764 11468999999998 5699999999887
|
| >3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=82.13 E-value=3.6 Score=36.45 Aligned_cols=40 Identities=23% Similarity=0.150 Sum_probs=32.3
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHH
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYL 214 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~ 214 (534)
|-.+++..|++.. .+.|.++++++|. .++++.+.++++.+
T Consensus 72 G~~~si~~al~~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF--KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT--TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh--ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 4677888888876 2248999999998 56999999998876
|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
Probab=80.88 E-value=6.4 Score=40.60 Aligned_cols=112 Identities=20% Similarity=0.121 Sum_probs=66.4
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|+.|.+ .|...|+++.+... .++.| |+ +...+.++ +.+.+..++ .+.++.|...+++.| -+
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g~--~~i~v-v~-~~~~~~i~--------~~~~~~~~~---~~~~i~~~~q~~~lG-Ta 96 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLAP--QRLIV-VL-GHDHQRIA--------PLVGELADT---LGRTIDVALQDRPLG-TG 96 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHCC--SEEEE-EE-CTTHHHHH--------HHHHHHHHH---HTSCCEEEECSSCCC-HH
T ss_pred HeEECChh-HHHHHHHHHHhCCC--CEEEE-Ee-CCCHHHHH--------HHHHHHHHh---cCCcEEEEEcCCCCC-cH
Confidence 57888875 78888888877542 34433 33 33233333 233322222 367788886665555 89
Q ss_pred hHHHHHHHhhhccCCcEEEEecCC-CCCCHHHHHHHHHHHhcCC-cEEEEe
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDAD-FQPDEDFLWRTIPYLLENK-ELGLVQ 224 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~-~v~~V~ 224 (534)
+|+..+.+.......+.++++.+| .+.+++.+.+++....++. ++.+..
T Consensus 97 ~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 97 HAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp HHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 999998887522222355555555 5668999999988764333 343433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 534 | ||||
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 3e-04 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 27/231 (11%), Positives = 65/231 (28%), Gaps = 6/231 (2%)
Query: 88 KSYPMVLVQIPMYNEKEVY-KLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQ 145
+ P V I +NE ++ + S + ++DD S + L+ Y +
Sbjct: 19 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK 78
Query: 146 KLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDED 205
KL + +E+ + K G + L+ ++ A + D
Sbjct: 79 KLKVPVHVIRMEQRSGLIRARLKGAA-VSRGQVITFLDAHCECTAGWLEPLLARIKHDRR 137
Query: 206 FLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGF 265
+ I ++ + + + + + +
Sbjct: 138 TVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTM 197
Query: 266 NGTAGVWRIQAIEDAGGWKDRTTV---EDMDLAVRASLKGWKFVFVGDLGV 313
G ++ G + + E+++++ R G V V
Sbjct: 198 AGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHV 248
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.96 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.89 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 99.79 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 99.34 | |
| d1pzta_ | 271 | beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos | 98.29 | |
| d1fo8a_ | 343 | N-acetylglucosaminyltransferase I {Rabbit (Oryctol | 97.67 | |
| d1h7ea_ | 245 | CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn | 91.76 | |
| d1v82a_ | 252 | Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human ( | 90.52 | |
| d1g97a2 | 250 | N-acetylglucosamine 1-phosphate uridyltransferase | 90.05 | |
| d3cu0a1 | 261 | 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo | 86.31 | |
| d1qwja_ | 228 | CMP acylneuraminate synthetase {Mouse (Mus musculu | 84.18 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=2e-28 Score=243.51 Aligned_cols=213 Identities=15% Similarity=0.100 Sum_probs=151.5
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
++.|.||||||+|||. +.|.+||+|+++|+||+...+|+ |+|+|+|++.+ +.++++.++. ..+++++
T Consensus 19 ~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~--------~~l~~~~~~~---~~~i~vi 87 (328)
T d1xhba2 19 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLK--------RPLESYVKKL---KVPVHVI 87 (328)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGT--------HHHHHHHHSS---SSCEEEE
T ss_pred CCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHH--------HHHHHHHHhc---CCCeEEE
Confidence 6789999999999997 68999999999999987643444 55568898887 5666555432 4567887
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCch-h-----h-
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECL-M-----T- 238 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~-~-----~- 238 (534)
+. +.+.|.++|+|.|+++| +||||+++|+|++++|++|+.++..+.+++.. ++.+.....+.+... . .
T Consensus 88 ~~-~~n~G~~~a~N~Gi~~a---~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~-~v~~~~~~i~~~~~~~~~~~~~~~ 162 (328)
T d1xhba2 88 RM-EQRSGLIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLARIKHDRRT-VVCPIIDVISDDTFEYMAGSDMTY 162 (328)
T ss_dssp EC-SSCCCHHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHHHHHCTTE-EEEEEEEEECSSSCCEECCCTTEE
T ss_pred Ee-cccccchHHHHHHHHhh---hcceeeecCcccccChhHHHHHHHHHhcCCCe-EEecceeeeccCceeeccCCcccc
Confidence 44 45666999999999999 99999999999999999999999999666554 444444333322100 0 0
Q ss_pred -HhH-hhhcccc--hhhh--hh--cccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEE
Q 044519 239 -RLQ-EMSLDYH--FSVE--QE--VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVF 307 (534)
Q Consensus 239 -~~~-~~~~~~~--~~~~--~~--~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~ 307 (534)
... ....... .... .. ..........++|+++++||++++++|||++... +||.|+++|+.++|+++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~ 242 (328)
T d1xhba2 163 GGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEI 242 (328)
T ss_dssp EEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEE
T ss_pred ccccccccccccccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEE
Confidence 000 0000000 0000 00 0011112233579999999999999999998653 5999999999999999999
Q ss_pred eccCccccc
Q 044519 308 VGDLGVKNE 316 (534)
Q Consensus 308 ~~~~~~~~~ 316 (534)
+|++.++|.
T Consensus 243 ~p~~~v~H~ 251 (328)
T d1xhba2 243 VTCSHVGHV 251 (328)
T ss_dssp EEEEEEEEE
T ss_pred eCCeEEEEe
Confidence 999988764
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=6e-24 Score=202.89 Aligned_cols=204 Identities=14% Similarity=0.120 Sum_probs=143.4
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK-- 168 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~-- 168 (534)
|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+ ++++.. +..++++++.+
T Consensus 1 P~vSiiip~yN~~~~l~~~l~Si~~Qt~~~~eiiv-vdd~S~d~t~~---------~l~~~~-----~~~~i~~~~~~~~ 65 (255)
T d1qg8a_ 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLN---------VIRPFL-----NDNRVRFYQSDIS 65 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEE-EECSCCHHHHH---------HHGGGG-----GSTTEEEEECCCC
T ss_pred CEEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCccHHH---------HHHHhh-----hhccccccccccc
Confidence 89999999999999999999999999999865433 66669998887 665443 24667777543
Q ss_pred -----CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhh
Q 044519 169 -----NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEM 243 (534)
Q Consensus 169 -----~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~ 243 (534)
..+.|+++|+|.|++.| +|||++++|+|+.++|++|+++++.+.++|+++++.+.....+.+.+.... .
T Consensus 66 ~~~~~~~~~g~~~a~N~gi~~a---~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~-- 139 (255)
T d1qg8a_ 66 GVKERTEKTRYAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV-K-- 139 (255)
T ss_dssp SHHHHHSSCHHHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE-E--
T ss_pred ccccccccchhccccccccccc---ccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCcEe-e--
Confidence 24567999999999999 999999999999999999999999998899999998776554433221100 0
Q ss_pred hcccchhhhhhcccccCccccccCCcchhhHHHHHHhC----CCCCC----CccchHHHHHHHHhCCCEEEEeccCcc-c
Q 044519 244 SLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG----GWKDR----TTVEDMDLAVRASLKGWKFVFVGDLGV-K 314 (534)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G----g~~~~----~~~ED~~l~~rl~~~G~ki~~~~~~~~-~ 314 (534)
...... ..........+.+++.++|++++++++ ++.++ ...||.|+..|+.+ ++++.++++... +
T Consensus 140 --~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~~-~~~~~~i~~~l~~~ 213 (255)
T d1qg8a_ 140 --ETVRPA---AQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FYPFYPLDEELDLN 213 (255)
T ss_dssp --EEEECC---CSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TCCBEEEEEEEEEE
T ss_pred --eecccc---hhhhhhhcccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHHc-CCCEEEecCCEEEE
Confidence 000000 011112222346777899999998863 44432 23699999999964 668888887654 3
Q ss_pred ccCCcCH
Q 044519 315 NELPSTF 321 (534)
Q Consensus 315 ~~~p~t~ 321 (534)
...+.+.
T Consensus 214 ~~~~~s~ 220 (255)
T d1qg8a_ 214 YITDQSI 220 (255)
T ss_dssp EEC----
T ss_pred EEcCCcc
Confidence 3344443
|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Exostosin domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=4.5e-20 Score=173.96 Aligned_cols=183 Identities=8% Similarity=-0.008 Sum_probs=122.0
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
.++||+||+||+++.+++||+|+++|+|++ + +|+|+|||+|++.+ .+.+ +..+ .+..++.. ++
T Consensus 3 ~~~tvii~tyn~~~~l~~~l~sl~~q~~~~-~-~iiV~d~~sd~~~~---------~i~~---~~~~--~~~~~~~~-~~ 65 (265)
T d1omza_ 3 DSFTLIMQTYNRTDLLLRLLNHYQAVPSLH-K-VIVVWNNVGEKGPE---------ELWN---SLGP--HPIPVIFK-PQ 65 (265)
T ss_dssp TCEEEEEEESSCHHHHHHHHHHHTTSTTEE-E-EEEEECCTTCCCTH---------HHHH---HTCC--CSSCEEEE-EC
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHcCCCcC-e-EEEEECCCCCccHH---------HHHH---Hhcc--cceEEEEe-cC
Confidence 479999999999999999999999999996 3 46688889998888 3322 2211 22223322 34
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
++|+++|+|.|++.| +||||+++|+|++++|++|+++++.++++|+..++++........... .... ...
T Consensus 66 ~~g~~~a~n~~~~~a---~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~------~~~ 135 (265)
T d1omza_ 66 TANKMRNRLQVFPEV---ETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGI-YSYG------GFE 135 (265)
T ss_dssp SSCCGGGGGSCCTTC---CSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTE-EEEE------CTT
T ss_pred CCCchhhhhhhHHhC---CcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcceecccccccccCCcc-cccc------ccc
Confidence 566999999999999 999999999999999999999999997777766655554333221110 0000 000
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCC--------CccchHHHHHHHHh
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR--------TTVEDMDLAVRASL 300 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--------~~~ED~~l~~rl~~ 300 (534)
................|++.++||+.++..+.+... ...+|.+.......
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (265)
T d1omza_ 136 LQTPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQNCDDIAMNFLVTR 193 (265)
T ss_dssp SCCCSSSSSCCBSEECTTEEEEETHHHHHHHTSCHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred ccccccccccccceeccceeEecHHHHHHHhhhHHHHhhhhhhhcchHHHHHHHHHHH
Confidence 000001111222234588889999999887665432 33566666665553
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=99.34 E-value=4e-12 Score=124.57 Aligned_cols=197 Identities=13% Similarity=0.038 Sum_probs=114.1
Q ss_pred EEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec---C
Q 044519 94 LVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK---N 169 (534)
Q Consensus 94 sViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~---~ 169 (534)
-|+||+|||+ +.+..+++.+.+ +|..+. |+|+|||+|+|.. ++.+...+.....+..+....+. .
T Consensus 2 lVVIP~~NEe~~il~~~v~~~a~--~P~~~e-IvVvDdsSdDtt~--------~i~~~~~~~~~~~~~~v~~~~~~~l~~ 70 (381)
T d2bo4a1 2 LVVFPFKHEHPEVLLHNVRVAAA--HPRVHE-VLCIGYERDQTYE--------AVERAAPEISRATGTPVSVRLQERLGT 70 (381)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHH--STTCCE-EEEEESSCCHHHH--------HHHHHHHHHHHHHSCCEEEEECCCCSS
T ss_pred EEEEEcCCCcHHHHHHHHHHHHh--CCCeeE-EEEEcCCCCCcHH--------HHHHHhhhhhccccccchhhhhccccc
Confidence 4899999998 677777765544 354444 4477888887777 23333222222223333322121 1
Q ss_pred CCCCChhHH----HHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhh
Q 044519 170 RNGYKAGAL----KEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMS 244 (534)
Q Consensus 170 ~~g~Ka~al----n~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~ 244 (534)
.+.||+.++ ..|++++ +||+++++|||. -.+|+++.+++..+. .+.++|.+... .....+-.++.-...
T Consensus 71 ~~~GKG~g~~~A~~~g~~~a---~gd~lvflDADl~~~~pe~i~~L~~~i~--~g~d~V~g~y~-R~~~~grvt~~l~~p 144 (381)
T d2bo4a1 71 LRPGKGDGMNTALRYFLEET---QWERIHFYDADITSFGPDWITKAEEAAD--FGYGLVRHYFP-RASTDAMITWMITRT 144 (381)
T ss_dssp SSSSHHHHHHHHHHHHHHHC---CCSEEEECCTTCSSCCHHHHHHHHHHHH--TTCSEEEEECC-CCTTSCHHHHHTHHH
T ss_pred ccCCCcHHHHHHHHHHHHhC---CCCEEEEEcCCcCcCCHHHHHHHHHHHh--hhcCeEEEeec-cccCCCceehHhhHH
Confidence 223576654 4555666 999999999997 468999999999984 34555555221 112222233221111
Q ss_pred cc-cchhhhhhcccccCccccccCCcchhhHHHHHHhC----CCCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 245 LD-YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG----GWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G----g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
+. ..+.. .....+....|...+++|++++++- .+.+...+=|.++...+.++|.|+..+|...
T Consensus 145 ll~~l~~~-----~~~~~i~dPl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~ 212 (381)
T d2bo4a1 145 GFALLWPH-----TELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPE 212 (381)
T ss_dssp HHHHHCTT-----SSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTT
T ss_pred HHHHHhhh-----hcccccccCCcccceeeHHHHHHhhhhccccccCCcccchHHHHHHHHcCCeEEecCCCH
Confidence 10 00000 0011111223667799999998751 1222345779999999999999999987643
|
| >d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: beta 1,4 galactosyltransferase (b4GalT1) domain: beta 1,4 galactosyltransferase (b4GalT1) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.29 E-value=5.6e-07 Score=83.20 Aligned_cols=179 Identities=15% Similarity=0.158 Sum_probs=109.8
Q ss_pred CcEEEEEeccCchHHHHHHHHHHH---c-CCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAAC---G-LSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~---~-q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
-+|+||||-+|.++.++..+..+. + |. ....|+|++...+...
T Consensus 49 ~kvaIIIPyRdR~~hL~~fl~~l~~~L~~q~---~~y~I~vieQ~~~~~F------------------------------ 95 (271)
T d1pzta_ 49 HKVAIIIPFRNRQEHLKYWLYYLHPILQRQQ---LDYGIYVINQAGESMF------------------------------ 95 (271)
T ss_dssp CEEEEEEEESSCHHHHHHHHHHHHHHHHHTT---CEEEEEEEEECSSSCC------------------------------
T ss_pred ceEEEEEecCChHHHHHHHHHHHHHHHHhcC---CCEEEEEEeccCCcch------------------------------
Confidence 479999999999987876666653 2 33 2355667766443211
Q ss_pred ecCCCCCChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc
Q 044519 167 RKNRNGYKAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~ 245 (534)
.++..+|.|+..|.. .+.+++++.|.|..|..+.... ..++ ...+... .....
T Consensus 96 ------NRg~llNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~Y------~~~~------~p~h~~~------~~~~~-- 149 (271)
T d1pzta_ 96 ------NRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTY------RCFS------QPRHISV------AMDKF-- 149 (271)
T ss_dssp ------CHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCC------SCCS------SCEECCC------EEGGG--
T ss_pred ------hhhhhhhHHHHHhhhccCccEEEEecCCcCcccccccc------cccc------cCcceee------ecccc--
Confidence 166678888887632 4678899999999986653210 0000 0001000 00000
Q ss_pred ccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCcc-----cc--
Q 044519 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLGV-----KN-- 315 (534)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~-----~~-- 315 (534)
........+.|...+++++.+++++||++... +||.|+..|+..+|.++...+.... .+
T Consensus 150 -----------~~~~~y~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~~~~~~y~~l~H~~ 218 (271)
T d1pzta_ 150 -----------GFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSR 218 (271)
T ss_dssp -----------TTSCSCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCCTTTTEEEECCCSS
T ss_pred -----------ccccccccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccCCCccccceeeccC
Confidence 00111122357788899999999999997544 7999999999999988765433221 11
Q ss_pred -----cCCcCHHHHHHHHhhhccchhhHH
Q 044519 316 -----ELPSTFKAYRYQQHRWSCGPSNLF 339 (534)
Q Consensus 316 -----~~p~t~~~~~~Qr~RW~~G~~~~~ 339 (534)
..+..+..+.+.+.||....+..+
T Consensus 219 d~~~~~n~~r~~~l~~~~~~~~~dGLnsl 247 (271)
T d1pzta_ 219 DKKNEPNPQRFDRIAHTKETMLSDGLNSL 247 (271)
T ss_dssp CCCCCCCCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CcccccchHHHHHHHHHhhcccCCCCcce
Confidence 123345567777888877655443
|
| >d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: N-acetylglucosaminyltransferase I domain: N-acetylglucosaminyltransferase I species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.67 E-value=5.1e-05 Score=71.78 Aligned_cols=119 Identities=12% Similarity=0.082 Sum_probs=71.2
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|-|-|+|-+||.+ .+++||+|++++.-..++..|+ ..|++.+++.+ .++++. ..+.++....
T Consensus 2 ~viPVlv~a~NRP-~l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~~~---------~v~~~~-------~~v~~I~~~~ 64 (343)
T d1fo8a_ 2 AVIPILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQ---------VIASYG-------SAVTHIRQPD 64 (343)
T ss_dssp CCCCEEEEESSCT-THHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHH---------HHHTTG-------GGSEEEECSC
T ss_pred CcccEEEEEcCHH-HHHHHHHHHHhcCccccCccEEEEecCCchhHHH---------HHHHHH-------HHHHHhcCCc
Confidence 4567899999998 5899999998765333333333 44655544433 433221 2233432211
Q ss_pred CC------CCChhHHH--------HHHHhhhc-cCCcEEEEecCCCCCCHHHHH---HHHHHHhcCCcEEEEeee
Q 044519 170 RN------GYKAGALK--------EGLEKQYV-KDCQFVVIFDADFQPDEDFLW---RTIPYLLENKELGLVQAR 226 (534)
Q Consensus 170 ~~------g~Ka~aln--------~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~---~lv~~~~~~~~v~~V~~~ 226 (534)
.. ..+...-| .|+..... .++|.++++.+|..+.||++. .+++.+++|+.+-+|+|.
T Consensus 65 ~~~~~~~~~~~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D~~i~~IS~w 139 (343)
T d1fo8a_ 65 LSNIAVQPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW 139 (343)
T ss_dssp CCCCCCCTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC
T ss_pred cccceecchhhcccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 00 01111112 22222211 247999999999999999994 566677789999999875
|
| >d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Cytidylytransferase domain: CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase species: Escherichia coli, KpsU [TaxId: 562]
Probab=91.76 E-value=1.8 Score=37.46 Aligned_cols=182 Identities=11% Similarity=0.054 Sum_probs=89.6
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHH
Q 044519 103 KEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGL 182 (534)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl 182 (534)
.+.+..+++++.+...-+ + |+|+.|+ +... ..+..+ +..+ +.+.+....-......++
T Consensus 27 kPli~~~i~~a~~~~~~d-~--Iiv~td~--~~i~------------~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~ 84 (245)
T d1h7ea_ 27 KPMIQHVYERALQVAGVA-E--VWVATDD--PRVE------------QAVQAF---GGKA--IMTRNDHESGTDRLVEVM 84 (245)
T ss_dssp EEHHHHHHHHHHTCTTCC-E--EEEEESC--HHHH------------HHHHHT---TCEE--EECCSCCSSHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCC-e--EEEeccc--ccch------------hhhhhc---CceE--EEecCccccccHHHHHHH
Confidence 347889999988766432 3 3344332 1111 222222 3333 323333322344445555
Q ss_pred HhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEeeeeEeec---CCCchhhHhHhhhcc-cchhhhhh--c
Q 044519 183 EKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQARWKFVN---ADECLMTRLQEMSLD-YHFSVEQE--V 255 (534)
Q Consensus 183 ~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~n---~~~~~~~~~~~~~~~-~~~~~~~~--~ 255 (534)
+.. +.|+++.+++|+.. +++.+..++..+..+.....+........ .+.........-... ..+..... .
T Consensus 85 ~~~---~~d~vv~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~~~~~ 161 (245)
T d1h7ea_ 85 HKV---EADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYP 161 (245)
T ss_dssp HHS---CCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSCEEEECTTCBEEEEESSCSSCC
T ss_pred Hhc---CCCEEEEecchhhhcccccchhhhhcccccccccccccccccccccccCCcceeeccchhhhhhhhhhhhhhhh
Confidence 555 89999999999765 88999999888755544333332221110 000000000000000 00000000 0
Q ss_pred ccccCccccccCCcchhhHHHHHHhCCCCCCC--ccchHHHHHHHHhCCCEEEEecc
Q 044519 256 GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT--TVEDMDLAVRASLKGWKFVFVGD 310 (534)
Q Consensus 256 ~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~ 310 (534)
...........++...++++.+++...+.... ..|+.|. .|+...|.++..+..
T Consensus 162 ~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~s~~e~~e~ie~-lr~l~ng~~I~~~~~ 217 (245)
T d1h7ea_ 162 RNAEKARYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQ-LRLMNAGINIRTFEV 217 (245)
T ss_dssp TTGGGCCEEEEEEEEEEEHHHHHHGGGSCCCHHHHHHTCTT-HHHHHTTCCEEEEEC
T ss_pred hcccccccceeeeeEEeeeccccccccccCChhhhhhhHHH-HHHHHCCCeEEEEEe
Confidence 01111111123556789999999876665432 2455554 467789999876653
|
| >d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: 1,3-glucuronyltransferase domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.52 E-value=0.85 Score=39.91 Aligned_cols=104 Identities=15% Similarity=0.102 Sum_probs=59.7
Q ss_pred CCcEEEEEeccCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 90 YPMVLVQIPMYNEK---EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 90 ~P~VsViIP~yne~---~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.|.|-+|-|+|... ..+.+.-..+ .+- |+ +.=+|+.|+.+.|.. ..++++ + -|..-+++.
T Consensus 1 lp~I~vVTPTy~R~~Q~~~LtRLa~TL-~lV-p~--l~WIVVEda~~~t~~------va~lL~----~---sgl~y~HL~ 63 (252)
T d1v82a_ 1 LPTIHVVTPTYSRPVQKAELTRMANTL-LHV-PN--LHWLVVEDAPRRTPL------TARLLR----D---TGLNYTHLH 63 (252)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TTC-SS--EEEEEEESSSSCCHH------HHHHHH----H---HCCEEEEEE
T ss_pred CCCEEEECCCCCchhhHHHHHHHHhHH-hcC-CC--ceEEEEeCCCCCCHH------HHHHHH----H---cCCceEeec
Confidence 48899999999997 3455544444 333 54 444566654433332 002433 2 244444443
Q ss_pred ecCC----------CCC---ChhHHHHHHHhhhc------cCCcEEEEecCCCCCCHHHHHHH
Q 044519 167 RKNR----------NGY---KAGALKEGLEKQYV------KDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 167 r~~~----------~g~---Ka~aln~gl~~a~~------~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
...+ ... -...+|.|+++... +..-+|.|.|+|...+-+...++
T Consensus 64 ~~~p~~~~~~~~~~~~~~~rg~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdem 126 (252)
T d1v82a_ 64 VETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 126 (252)
T ss_dssp CCCCHHHHCCC-----CCCTTHHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHH
T ss_pred cCCCcccccccccccccccccHHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHH
Confidence 2211 000 12478999987621 12468899999999999888765
|
| >d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=90.05 E-value=1.8 Score=37.28 Aligned_cols=99 Identities=9% Similarity=0.030 Sum_probs=57.4
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|+ |....|+.+++.+.++. ..+++| |+.. .+.... .. ......+.....+. |..+
T Consensus 24 ~~i-~Gkpli~~~l~~l~~~~--~~~iiv-v~~~-~~~~~~------------~~------~~~~~~~~~~~~~~-g~~~ 79 (250)
T d1g97a2 24 HKV-AGISMLEHVFRSVGAIQ--PEKTVT-VVGH-KAELVE------------EV------LAGQTEFVTQSEQL-GTGH 79 (250)
T ss_dssp SEE-TTEEHHHHHHHHHGGGC--CSEEEE-EECT-THHHHH------------HH------TTTTSEEEECSSCC-CHHH
T ss_pred eEE-CCeeHHHHHHHHHHHcC--CCeEEE-eccc-ccchhh------------hh------cccccccccccccc-ccch
Confidence 444 45568999999998864 233333 4433 222111 11 12334444344344 4777
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKE 219 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~ 219 (534)
++..+.........+.+.+.++|....++-+++++.....+..
T Consensus 80 ~~~~a~~~l~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~ 122 (250)
T d1g97a2 80 AVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKN 122 (250)
T ss_dssp HHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhcccCcceEEecCCCccCHHHHHHHHHHHhhhcc
Confidence 7766666542234566777777788899999999887744443
|
| >d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: 1,3-glucuronyltransferase domain: 1,3-Glucuronyltransferase I (glcAT-I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.31 E-value=4.2 Score=35.42 Aligned_cols=102 Identities=12% Similarity=0.020 Sum_probs=57.6
Q ss_pred cEEEEEeccCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 92 MVLVQIPMYNEK---EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 92 ~VsViIP~yne~---~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
.|-||-|+|... ..+.+.-..+.-- |+ +.=+|++|+...|.. +.+..++ .+...+++.-.
T Consensus 2 TIyvVTPTY~R~~Q~a~LtRLa~TL~lV--p~--l~WIVVEDa~~~t~~----------v~~lL~~---sgl~y~HL~~~ 64 (261)
T d3cu0a1 2 TIYVVTPTYARLVQKAELVRLSQTLSLV--PR--LHWLLVEDAEGPTPL----------VSGLLAA---SGLLFTHLVVL 64 (261)
T ss_dssp EEEEEEEECCSTTHHHHHHHHHHHHTTS--SS--EEEEEEESSSSCCHH----------HHHHHHH---HCSEEEEEECC
T ss_pred eEEEECCCCCCchhHHHHHHHHHHHhcC--CC--eeEEEEECCCCCCHH----------HHHHHHH---cCCceEEeecC
Confidence 467888999987 3455544444333 54 444566665443332 1122222 25554444322
Q ss_pred CCCCC-------------ChhHHHHHHHhhhcc--------------CCcEEEEecCCCCCCHHHHHHH
Q 044519 169 NRNGY-------------KAGALKEGLEKQYVK--------------DCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 169 ~~~g~-------------Ka~aln~gl~~a~~~--------------~~d~v~~lDaD~~~~pd~L~~l 210 (534)
.+... -...+|.|++..... ..-+|.|.|+|...+-+...++
T Consensus 65 tp~~~~~~~~~~~~~~prgv~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~em 133 (261)
T d3cu0a1 65 TPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 133 (261)
T ss_dssp CC-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred CchhhcccccCcccccccCHHHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHH
Confidence 11111 114789999986211 2368899999999999888775
|
| >d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Cytidylytransferase domain: CMP acylneuraminate synthetase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.18 E-value=8.7 Score=32.16 Aligned_cols=108 Identities=15% Similarity=0.083 Sum_probs=62.6
Q ss_pred CcEEEEEeccCch--------------HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHh
Q 044519 91 PMVLVQIPMYNEK--------------EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI 156 (534)
Q Consensus 91 P~VsViIP~yne~--------------~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~ 156 (534)
|+|+.+||++... ..++.+++++.+..+- ++ |+|..|+ +... +.+..+
T Consensus 2 ~ki~aiIpaR~~S~Rlp~K~l~~i~gkpLi~~~i~~~~ks~~i-d~--Iivstd~--~~i~------------~~~~~~- 63 (228)
T d1qwja_ 2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAGVF-QS--VWVSTDH--DEIE------------NVAKQF- 63 (228)
T ss_dssp CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHTCC-SE--EEEEESC--HHHH------------HHHHHT-
T ss_pred CCEEEEeccCCCCCCCCCcchhhhCCeeHHHHHHHHHHhcCCc-ce--EEEecch--hhhh------------hhhhhc-
Confidence 6889999988543 3688899988776643 22 3344442 2222 222222
Q ss_pred hcCccEEEEEec-CCCCCChhHH---HHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEE
Q 044519 157 EKGVNVKYETRK-NRNGYKAGAL---KEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 157 ~~~~~v~~~~r~-~~~g~Ka~al---n~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V 223 (534)
+. ....++ ...+.....+ ..+++. ....++++++.+|+-+ +++.+.+++..+..+ +.+.+
T Consensus 64 --~~--~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~~-~~d~~ 128 (228)
T d1qwja_ 64 --GA--QVHRRSSETSKDSSTSLDAIVEFLNY--HNEVDIVGNIQATSPCLHPTDLQKVAEMIREE-GYDSV 128 (228)
T ss_dssp --TC--EEEECCGGGSSTTCCHHHHHHHHHTT--CTTCSEEEEECTTCTTCCHHHHHHHHHHHHSS-CCSEE
T ss_pred --Cc--cccccccccccccchhhhhhhhcccc--ccccceeeeecccccccCchhhhhhhhhhhcc-Ccccc
Confidence 33 333333 2233333333 333332 2468999999999766 999999999988543 44433
|