Citrus Sinensis ID: 044542

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
Protein Sequence
MGLKHQSCRNSSSFSPLSLRYSTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPYI
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccccccccccEEEEEEccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHccEEEEccccHHHHHHHHHHccEEEEccccccccHHHHHHHHHHcccEEEcccccccccccccccEEEEEcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccEEEEcccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHccccEEEcccccccccHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHcccHccEEEEEccccHHHccccccHHHHHHHHccccccccEEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccEEEEccccHHHHHHHHHHccEEEcccccccHHHHHHHHHHHccccEEEEcccccccEEEcccccEEEccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mglkhqscrnsssfsplslRYSTVLISALFFTSfylfisplrhvpepgflkgegkrfigdlrdakfswnklcfgptfeKLKLAVFSktwpigaapggmerHASTLYHALAARGheihvftapsdrkphndvhqgnlHVHFAandhgsvnlnndgafdyvhtesvslphwrakmvpnvaVTWHGIWYEVMHSKLFGElfsnqngvlpgsmtELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIyqlpqrnvHVILNgvdetkfvhdpeagvrfpeklgvpanVSLVMGVAgrlvrdkghplLYEAFSsitrdhpgVYLLVAgtgpwgrryaeLGQNVKVLGALEAHQLSEFYNAldvfvnptlrpqgldlTLIEAMhcgrtvltpnypsiVRTVVVNeelgytfspNVKSFVEALELVIRDGPKvlqrkglacKEHALSMFTATKMASAYERFFLRMKNPYI
Flexible Loop (DISEMBL)
mglkhqscrnsssfsplSLRYSTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGvrfpeklgvpanVSLVMGVAGRLVRDKGHPLLYEAFssitrdhpgvYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGrtvltpnypSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPYI
Low Complexity Region (SEG)
MGLKHQscrnsssfsplslrysTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPYI
Disordered region (IsUnstruct)
****************LSLRYSTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA*********VHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR******
Disordered Region (DISOPRED)
*******************RYSTVLISALFFTSFYLFISPLRHV********************************FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPY*
Disordered Region (DISEMBL)
***************PLSLRYSTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPYI
Disordered Region (DISPRO)
****************LSLRYSTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPYI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLKHQSCRNSSSFSPLSLRYSTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPYI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	465	2.2.26 [Sep-21-2011]
P37287	484	Phosphatidylinositol N-ac	yes	no	0.655	0.630	0.268	2e-11
D1BZ82	417	D-inositol 3-phosphate gl	yes	no	0.662	0.738	0.258	2e-11
Q64323	485	N-acetylglucosaminyl-phos	yes	no	0.658	0.630	0.268	8e-10
P39862	380	Capsular polysaccharide b	yes	no	0.427	0.523	0.305	5e-08
C7MSY6	431	D-inositol 3-phosphate gl	yes	no	0.698	0.754	0.246	9e-08
D1BD84	420	D-inositol 3-phosphate gl	no	no	0.739	0.819	0.241	1e-07
P32363	452	Phosphatidylinositol N-ac	yes	no	0.397	0.409	0.246	1e-07
B5VSZ6	452	Phosphatidylinositol N-ac	N/A	no	0.397	0.409	0.246	1e-07
B3LKQ3	452	Phosphatidylinositol N-ac	N/A	no	0.397	0.409	0.246	1e-07
P26470	381	Lipopolysaccharide 1,2-N-	yes	no	0.438	0.535	0.237	3e-07

>sp|P37287|PIGA_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 135/339 (39%), Gaps = 34/339 (10%)

Query: 96  GGMERHASTLYHALAARGHEIHVFT-APSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDG 154
           GG+E H   L   L  RGH++ + T A  +RK    +  G L V++       V  N   
Sbjct: 47  GGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSG-LKVYYLPL---KVMYNQST 102

Query: 155 AFDYVHTESVSLPHWRAKMVPN--VAVTWHGIWYEVMHSKLF-GELFSNQNGVLPGSMTE 211
           A    H    SLP  R   V      +  H  +  + H  LF  +    Q      S+  
Sbjct: 103 ATTLFH----SLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFG 158

Query: 212 LQEAMPRLVDEIRFFS--SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD 269
             +    L +++   S    N  IC+S ++ E  V    L    V VI N VD T F  D
Sbjct: 159 FADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPD 218

Query: 270 PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW 329
           P              + S+ + V  RLV  KG  LL      + + +P +  ++ G GP 
Sbjct: 219 P-----------FRRHDSITIVVVSRLVYRKGIDLLSGIIPELCQKYPDLNFIIGGEGPK 267

Query: 330 G------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR 383
                  R   +L   V++LGALE   +        +F+N +L  +   + ++EA  CG 
Sbjct: 268 RIILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSL-TEAFCMAIVEAASCGL 326

Query: 384 TVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI 422
            V++     I    V+ E L     P+VKS  E LE  I
Sbjct: 327 QVVSTRVGGIPE--VLPENLIILCEPSVKSLCEGLEKAI 363

Necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, the very early intermediate in GPI-anchor biosynthesis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 9EC: 8

>sp|D1BZ82|MSHA_XYLCX D-inositol 3-phosphate glycosyltransferase OS=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) GN=mshA PE=3 SV=1

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 150/367 (40%), Gaps = 59/367 (16%)

Query: 74  GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT--APSDRKPHNDV 131
           GP    L +       P     GGM  +   L  ALA RG E+ +FT    S + P  DV
Sbjct: 6   GPRVAMLSVHTSPLDQPGTGDAGGMNVYVLELSRALARRGAEVEIFTRATSSAQPPVVDV 65

Query: 132 HQGNLHVHFAANDHGSVNLNN--------------------DGAFDYVHTESVSLPHWRA 171
             G   +H  A     ++ N+                    +G +D VHT      +W +
Sbjct: 66  QPGIRVLHVPAGPFEGLDKNDLPGQLCAFTAGVLRAEAHRSEGWYDVVHTH-----YWLS 120

Query: 172 KMVPNVAVT-WHGIWYEVMHSKLFGELFSNQNGVL-PGSMTELQEAMPRLVDEIRFFSSY 229
                +A   W       MH+     +   +N  L PG + E Q    R++ E +  ++ 
Sbjct: 121 GQAGWLAAERWDVPLVHTMHT-----MARVKNAALAPGDVPEPQG---RVIGEEQVVAAS 172

Query: 230 NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV----HDPEAGVRFPEKLGVPAN 285
           +  +  +   AE LV++Y      +HV+  GVD   F      D  A     E+LG+P +
Sbjct: 173 DALVASTREEAEDLVRLYGADLDRIHVVPPGVDLDTFTPPVPSDATARTALRERLGLPVD 232

Query: 286 VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYA---------EL 336
             L++  AGR+   KG  +L +A   +  +   V L+V G G  GR  A         + 
Sbjct: 233 SPLIL-FAGRVQLLKGPDVLVQALEHLPEE---VRLVVLG-GASGRPTAVRELEALAHQC 287

Query: 337 GQNVKVL--GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIV 394
           G   +VL    +E  +L+++Y A DV   P+   +   L   EA  CG  V+      + 
Sbjct: 288 GVRDRVLVHPPVERRRLADWYRAADVVAVPSHN-ESFGLVAAEAQACGTPVVAAAVGGL- 345

Query: 395 RTVVVNE 401
           RTVV+++
Sbjct: 346 RTVVLDD 352

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) (taxid: 446471)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|Q64323|PIGA_MOUSE N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein OS=Mus musculus GN=Piga PE=2 SV=1

 Score = 65.5 bits (158), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 134/339 (39%), Gaps = 33/339 (9%)

Query: 96  GGMERHASTLYHALAARGHEIHVFT-APSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDG 154
           GG+E H   L   L  RGH++   T A  +RK    +  G L V++       V  N   
Sbjct: 47  GGVESHIYQLSQCLIERGHKVITVTHAYGNRKGVRYLTNG-LKVYYLP---LRVMYNQST 102

Query: 155 AFDYVHTESVSLPHWRAKMVPN--VAVTWHGIWYEVMHSKLF-GELFSNQNGVLPGSMTE 211
           A    H    SLP  R   V      +  H  +  + H  LF  +    Q      S+  
Sbjct: 103 ATTLFH----SLPLLRYIFVRERITIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFG 158

Query: 212 LQEAMPRLVDEIRFFS--SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD 269
             +    L +++   S    N  IC+S ++ E  V    L    V VI N VD T F  D
Sbjct: 159 FADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPD 218

Query: 270 PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW 329
           P     F     V     + + V  RLV  KG  LL      + + +  ++ L+ G GP 
Sbjct: 219 P-----FRRHDSV-----ITVVVVSRLVYRKGTDLLSGIIPELCQKYQELHFLIGGEGPK 268

Query: 330 G------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR 383
                  R   +L   V++LGALE   +        +F+N +L  +   + ++EA  CG 
Sbjct: 269 RIILEEVRERYQLHDRVQLLGALEHKDVRNVLVQGHIFLNTSL-TEAFCMAIVEAASCGL 327

Query: 384 TVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI 422
            V++     I    V+ E L     P+VKS  + LE  I
Sbjct: 328 QVVSTKVGGIPE--VLPESLIILCEPSVKSLCDGLEKAI 364

Necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, the very early intermediate in GPI-anchor biosynthesis.

Mus musculus (taxid: 10090)

>sp|P39862|CAPM_STAAU Capsular polysaccharide biosynthesis glycosyltransferase CapM OS=Staphylococcus aureus GN=capM PE=3 SV=1

 Score = 59.7 bits (143), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 88/216 (40%), Gaps = 17/216 (7%)

Query: 215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGV 274
           AM    D I    S    I  SN A E  + +      N      G+   KF  D     
Sbjct: 134 AMFCATDIIAISESLKHKIITSNLAKENKITVLGFGSSN------GIQFEKFQLDNN--- 184

Query: 275 RFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYA 334
           +  EK     N + V+G  GR+V+DKG   L ++F  I      V LLV G+        
Sbjct: 185 KLEEKYHKLLNDNFVIGYVGRIVKDKGIHELIQSFKIIVSKGYNVKLLVIGSLETENSID 244

Query: 335 E-----LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN 389
           E     L QN  V+          FYN ++VFV PT R +G     IEA      V+T N
Sbjct: 245 ESDYLFLTQNPNVVLIKHVSDPISFYNNMNVFVFPTHR-EGFGNVSIEAQALEVPVITTN 303

Query: 390 YPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRD 424
               + T VVN E G+     + K+  E +E +I D
Sbjct: 304 VTGAIDT-VVNGETGFIVEKGDFKAIAEKIEKLIND 338

Required for the biosynthesis of type 1 capsular polysaccharide.

Staphylococcus aureus (taxid: 1280)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|C7MSY6|MSHA_SACVD D-inositol 3-phosphate glycosyltransferase OS=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) GN=mshA PE=3 SV=1

 Score = 58.5 bits (140), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 156/386 (40%), Gaps = 61/386 (15%)

Query: 96  GGMERHASTLYHALAARGHEIHVFT--APSDRKPHNDVHQGNLHVHFAAN-----DHGSV 148
           GGM  + S     +A RG  + VFT    SD+ P  ++  G L  H  A      + G +
Sbjct: 34  GGMNVYISQTAVEMARRGVSVEVFTRATSSDQPPAVELAPGVLVRHIPAGPFEPLERGEL 93

Query: 149 ---------------NLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKL 193
                               G +D +H+      +W +  V  +A    G+   ++H+  
Sbjct: 94  PSQLCAFTSGVLRTEAFQEPGYYDLIHSH-----YWLSGQVGWLARDRWGV--PLVHTA- 145

Query: 194 FGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRN 253
              L   +N  L    T   E   R++ E +  +  ++ +  ++  A+ LV++Y      
Sbjct: 146 -HTLAKVKNAALASGDTP--EPRTRVIGEEQVVAEADRLVVNTDVEADQLVRLYDAAPDA 202

Query: 254 VHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSIT 313
           V  +  GVD  +F     A  R    LGVPA+ ++V+  AGR+   K   +L  A +++ 
Sbjct: 203 VRTVSPGVDLERFRPGSRAAAR--AALGVPAD-AVVLAFAGRIQPLKAPDVLLRATAALV 259

Query: 314 RDHPG----VYLLVAGTGPWGRRY----------AELGQN--VKVLGALEAHQLSEFYNA 357
           R  PG    + +LVAG GP G              ELG +   + L       L   Y A
Sbjct: 260 RRDPGLRRRLVVLVAG-GPSGSGLEQPRSLMDLAVELGIDDVTRFLPPQGGQDLVNVYRA 318

Query: 358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP--NVKSFV 415
            DV   P+   +   L  +EA  CG  V+      +   V V++E+     P  + + + 
Sbjct: 319 ADVVAVPSHN-ESFGLVALEAQACGTPVVAARVGGL--PVAVDDEVSGLLVPTHDTEDWA 375

Query: 416 EALELV-IRDGPKVLQRKGLACKEHA 440
           +AL  V +R  P+V        +EHA
Sbjct: 376 DALARVALR--PEVRAVLSRGAREHA 399

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) (taxid: 471857)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|D1BD84|MSHA_SANKS D-inositol 3-phosphate glycosyltransferase OS=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) GN=mshA PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 157/406 (38%), Gaps = 62/406 (15%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTA-PSDRKPHN-DVHQGNLHVHFAANDHGSVNLNND 153
           GGM  + + L  ALA  G E+ +FT   S  +P   +V  G L  H  A     ++ N+ 
Sbjct: 27  GGMNVYITELSRALARSGAEVEIFTRRTSSAQPDVVEVGDGILVRHITAGPFEGLDKNDL 86

Query: 154 GAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLP------- 206
                       L ++ A ++   A    G WY+V+HS  +    S Q G+L        
Sbjct: 87  PG---------QLCYFSAGVLRTEAARTQG-WYDVVHSHYW---LSGQAGMLAADRWNVP 133

Query: 207 -------------GSMT--ELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQ 251
                        GS+   ++ E   R++ E +     +  +  + + AE LV  Y    
Sbjct: 134 LVHSMHTMALVKNGSLAPGDVPEPAGRVIGEEQVVEVADALVANTAAEAEDLVTHYAADP 193

Query: 252 RNVHVILNGVDETKFVHDPEAGVRFPEK--------LGVPANVSLVMGVAGRLVRDKGHP 303
             VHV+  GVD   F   P AG              LG+PA+  +V+  AGR+   K   
Sbjct: 194 TRVHVVSPGVDLETFTPLPPAGADGARDTAAAERAALGLPADRKVVV-FAGRVQLLKAPD 252

Query: 304 LLYEAFSSITRDHPGVYLLVAGTGPWGRRYA-----------ELGQNVKVLGALEAHQLS 352
           +L  A   +      + LLV   G  GR  A            +  +V  L A+   +L+
Sbjct: 253 VLVRALGVMADHGDELPLLVVLGGASGRPTALRELEALAYQVGVSDDVLFLPAVSRSELA 312

Query: 353 EFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NV 411
            ++   D+   P+ R +   L  +EA  CG  V+  +   + RT V +   G      + 
Sbjct: 313 RWFRCADLVAVPS-RSESFGLVAVEAQACGTPVVAADVGGL-RTAVQDGRSGVLVPDHDP 370

Query: 412 KSFVEALELVIRDGPKV--LQRKGLACKEHALSMFTATKMASAYER 455
             +   L  ++RD  ++  L R  L    H     TA +    YE+
Sbjct: 371 HRWAAVLRDLLRDDERLARLSRGALEVAAHFSWDTTAEETRKVYEQ 416

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) (taxid: 446469)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|P32363|GPI3_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT14 PE=1 SV=4

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 14/199 (7%)

Query: 226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV-HDPEAGVRFPEKLGVPA 284
            ++ ++ IC+SN+  E ++   +L    + VI N V    F   DP  G +  +     +
Sbjct: 145 LTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFKPRDPTGGTKRKQ-----S 199

Query: 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE------LGQ 338
              +V+ V GRL  +KG  LL      +   H  V  +VAG GP    + +      L +
Sbjct: 200 RDKIVIVVIGRLFPNKGSDLLTRIIPKVCSSHEDVEFIVAGDGPKFIDFQQMIESHRLQK 259

Query: 339 NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVV 398
            V++LG++   ++ +     D++++ +L  +     L+EA  C   ++T     I   V+
Sbjct: 260 RVQLLGSVPHEKVRDVLCQGDIYLHASL-TEAFGTILVEAASCNLLIVTTQVGGIPE-VL 317

Query: 399 VNEELGYTFSPNVKSFVEA 417
            NE   Y    +V   V+A
Sbjct: 318 PNEMTVYAEQTSVSDLVQA 336

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|B5VSZ6|GPI3_YEAS6 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 14/199 (7%)

Query: 226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV-HDPEAGVRFPEKLGVPA 284
            ++ ++ IC+SN+  E ++   +L    + VI N V    F   DP  G +  +     +
Sbjct: 145 LTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFKPRDPTGGTKRKQ-----S 199

Query: 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE------LGQ 338
              +V+ V GRL  +KG  LL      +   H  V  +VAG GP    + +      L +
Sbjct: 200 RDKIVIVVIGRLFPNKGSDLLTRIIPKVCSSHEDVEFIVAGDGPKFIDFQQMIESHRLQK 259

Query: 339 NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVV 398
            V++LG++   ++ +     D++++ +L  +     L+EA  C   ++T     I   V+
Sbjct: 260 RVQLLGSVPHEKVRDVLCQGDIYLHASL-TEAFGTILVEAASCNLLIVTTQVGGIPE-VL 317

Query: 399 VNEELGYTFSPNVKSFVEA 417
            NE   Y    +V   V+A
Sbjct: 318 PNEMTVYAEQTSVSDLVQA 336

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

Saccharomyces cerevisiae (strain AWRI1631) (taxid: 545124)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|B3LKQ3|GPI3_YEAS1 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 14/199 (7%)

Query: 226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV-HDPEAGVRFPEKLGVPA 284
            ++ ++ IC+SN+  E ++   +L    + VI N V    F   DP  G +  +     +
Sbjct: 145 LTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFKPRDPTGGTKRKQ-----S 199

Query: 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE------LGQ 338
              +V+ V GRL  +KG  LL      +   H  V  +VAG GP    + +      L +
Sbjct: 200 RDKIVIVVIGRLFPNKGSDLLTRIIPKVCSSHEDVEFIVAGDGPKFIDFQQMIESHRLQK 259

Query: 339 NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVV 398
            V++LG++   ++ +     D++++ +L  +     L+EA  C   ++T     I   V+
Sbjct: 260 RVQLLGSVPHEKVRDVLCQGDIYLHASL-TEAFGTILVEAASCNLLIVTTQVGGIPE-VL 317

Query: 399 VNEELGYTFSPNVKSFVEA 417
            NE   Y    +V   V+A
Sbjct: 318 PNEMTVYAEQTSVSDLVQA 336

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

Saccharomyces cerevisiae (strain RM11-1a) (taxid: 285006)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|P26470|WAAK_SALTY Lipopolysaccharide 1,2-N-acetylglucosaminetransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=waaK PE=3 SV=1

 Score = 57.0 bits (136), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 28/232 (12%)

Query: 248 QLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYE 307
           +LP   V ++ NG     +  +P+  +R  ++L +  + ++++  AGR+  DKG  LL +
Sbjct: 157 RLPAAAVSIVPNGFCAETYKRNPQDNLR--QQLNIAEDATVLL-YAGRISPDKGILLLLQ 213

Query: 308 AFSSITRDHPGVYLLVAGTGPWGRRYAE--------------LGQNVKVLGALEAHQLSE 353
           AF  +      + L+V G  P+  R  E              +G +  + G     Q+  
Sbjct: 214 AFKQLRTLRSNIKLVVVG-DPYASRKGEKAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHN 272

Query: 354 FYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKS 413
           FY+  D+ + P+   +   +  +EAM  G+ VL      I    V++   GY  +  + S
Sbjct: 273 FYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGI-SEFVLDGITGYHLAEPMSS 331

Query: 414 FVEALELVIRDGPKVL---QRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
                + +I D  + L   +R  +A K  +L +F+     +  +RF  +MKN
Sbjct: 332 -----DSIINDINRALADKERHQIAEKAKSL-VFSKYSWENVAQRFEEQMKN 377

Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	465
255566553	484	glycosyltransferase, putative [Ricinus c	0.993	0.954	0.799	0.0
224116698	484	predicted protein [Populus trichocarpa]	0.991	0.952	0.775	0.0
5903105	509	Hypothetical protein [Arabidopsis thalia	0.926	0.846	0.646	1e-167
15219398	486	UDP-glycosyltransferase-like protein [Ar	0.926	0.886	0.646	1e-167
297839185	495	hypothetical protein ARALYDRAFT_316266 [	0.909	0.854	0.643	1e-162
357517395	482	Phosphatidylinositol alpha-mannosyltrans	0.987	0.952	0.479	1e-123
224138428	488	predicted protein [Populus trichocarpa]	0.937	0.893	0.494	1e-120
356529791	484	PREDICTED: uncharacterized protein LOC10	0.877	0.842	0.504	1e-119
356560861	495	PREDICTED: D-inositol-3-phosphate glycos	0.974	0.915	0.468	1e-119
302759971	497	glycosyltransferase, CAZy family GT4 [Se	0.864	0.808	0.511	1e-119

>gi|255566553|ref|XP_002524261.1| glycosyltransferase, putative [Ricinus communis] gi|223536452|gb|EEF38100.1| glycosyltransferase, putative [Ricinus communis]

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/473 (79%), Positives = 410/473 (86%), Gaps = 11/473 (2%)

Query: 1   MGLKHQSCRNSSSFSPLSLRYSTVLISALFFTSFYLFISPLRHV-PEPGFLKGEGKRFIG 59
           MG KHQ+ + +SS +  S+R+ST+LI  LFFTSFYLFISPLRHV  EP    G+   F G
Sbjct: 1   MGFKHQTHKTTSSSNSFSVRFSTILILTLFFTSFYLFISPLRHVNQEPTIFPGKTTSFSG 60

Query: 60  DLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVF 119
           DLRDAKF WNKL FGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVF
Sbjct: 61  DLRDAKFPWNKLSFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVF 120

Query: 120 TAPSDRKPHNDVHQGNLHVHFAANDHGSVN----------LNNDGAFDYVHTESVSLPHW 169
           T PSDRKPH DVH GNLHV+FAANDHGSVN          +N++GAFDYVHTESVSLPHW
Sbjct: 121 TVPSDRKPHVDVHVGNLHVYFAANDHGSVNCSLAFEIFNKVNSNGAFDYVHTESVSLPHW 180

Query: 170 RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSY 229
           RAKMVPN+AVTWHGIWYE+MHSKLF ELFSN NG LPG MTELQE+MPRL+DEIRFFSSY
Sbjct: 181 RAKMVPNLAVTWHGIWYEIMHSKLFEELFSNPNGFLPGPMTELQESMPRLLDEIRFFSSY 240

Query: 230 NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLV 289
            QHICISNSA EVLV IYQLPQRNVHVILNGVD TKFVH+PEAG RF  + G+  +VSLV
Sbjct: 241 KQHICISNSAGEVLVNIYQLPQRNVHVILNGVDNTKFVHNPEAGTRFRRRYGILDDVSLV 300

Query: 290 MGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAH 349
           MG+AGRLVRDKGHPLLYEAFS I + HP V LLVAG+GPWGRRYAELG NVKVLGALE+ 
Sbjct: 301 MGIAGRLVRDKGHPLLYEAFSMILKRHPNVCLLVAGSGPWGRRYAELGPNVKVLGALESS 360

Query: 350 QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP 409
           QLSEFYNA+DVFVNPTLRPQGLDLTLIEAMHCG+ VL PNYPSIV TVVV+E  GYTFSP
Sbjct: 361 QLSEFYNAIDVFVNPTLRPQGLDLTLIEAMHCGKPVLAPNYPSIVGTVVVDENFGYTFSP 420

Query: 410 NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
           NVKS VEALELVIRDGP +LQ+KG+ACKE+ALSMFTATKMA+AYERFFL MK 
Sbjct: 421 NVKSLVEALELVIRDGPVLLQKKGMACKEYALSMFTATKMAAAYERFFLCMKT 473

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116698|ref|XP_002317369.1| predicted protein [Populus trichocarpa] gi|222860434|gb|EEE97981.1| predicted protein [Populus trichocarpa]

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/473 (77%), Positives = 411/473 (86%), Gaps = 12/473 (2%)

Query: 1   MGLKHQSCRNSSSFSPLSLRYSTVLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGD 60
           MGLK+Q+C++SSS +   +RYS++L  A  F+S +L IS LR++ EP  L  E   F GD
Sbjct: 1   MGLKNQACKSSSSSNLFFVRYSSILTLAFLFSSCFLCISMLRYLQEPSVL-AEKDSFNGD 59

Query: 61  LRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120
           LRD KF+WNKLCFGPTFEKLKLAVFSKTWPIGA PGGMERHASTLYHALAARGHEIHVFT
Sbjct: 60  LRDVKFAWNKLCFGPTFEKLKLAVFSKTWPIGAGPGGMERHASTLYHALAARGHEIHVFT 119

Query: 121 APSDRKPH-NDVHQGNLHVHFAANDHGSVN----------LNNDGAFDYVHTESVSLPHW 169
           APSDRKPH +D+H+GNLHV+FAANDHGSVN          +N +G FDYVHTESVSLPHW
Sbjct: 120 APSDRKPHLDDIHEGNLHVYFAANDHGSVNCSLAFEIFNKINANGEFDYVHTESVSLPHW 179

Query: 170 RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSY 229
           RAK+VPNVAVTWHGIWYE+MHSKLF ELF+N +G LPG MTELQEAMPRL+DEIRFFSSY
Sbjct: 180 RAKLVPNVAVTWHGIWYEIMHSKLFEELFTNPDGALPGPMTELQEAMPRLIDEIRFFSSY 239

Query: 230 NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLV 289
            QH+CIS+SA EVLV++YQLP RNVHVILNGVD TKFVHDP+AG RF  K GVP N SLV
Sbjct: 240 KQHVCISHSAGEVLVRVYQLPFRNVHVILNGVDNTKFVHDPDAGARFRRKHGVPDNGSLV 299

Query: 290 MGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAH 349
           MGVAGRLVRDKGHPLL+EAFS I + HPGV+LLVAG+GPWG+RYAELG NVK+LGA+++ 
Sbjct: 300 MGVAGRLVRDKGHPLLHEAFSLIIKRHPGVFLLVAGSGPWGKRYAELGPNVKILGAMDSS 359

Query: 350 QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP 409
           QLSEFYNA+DVFVNPTLRPQGLDLTLIEAMHCG+ VLTPNYPSI+ TVVV EE GYTFSP
Sbjct: 360 QLSEFYNAIDVFVNPTLRPQGLDLTLIEAMHCGKPVLTPNYPSIIGTVVVKEEFGYTFSP 419

Query: 410 NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
           NVKSFVEALEL IRDGPKV + KG+ACKE+ALSMFTATKMASAYERFFL MKN
Sbjct: 420 NVKSFVEALELTIRDGPKVWRNKGMACKEYALSMFTATKMASAYERFFLCMKN 472

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5903105|gb|AAD55663.1|AC008017_36 Hypothetical protein [Arabidopsis thaliana]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 294/455 (64%), Positives = 353/455 (77%), Gaps = 24/455 (5%)

Query: 24  VLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLA 83
           + ++ +F +S+Y+F S   + P       E   F GDLRD  F WNKL  GP  EKLKLA
Sbjct: 28  ITLAFIFCSSYYIFFSQFDYSPVTS--SPENPPFAGDLRDLTFPWNKLSLGPISEKLKLA 85

Query: 84  VFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVH-QGNLHVHFAA 142
           VF K+WP+G+ PGGMERHA TLY +LA+RGHEIHVFT  SDR    + + +G+LHV+FA 
Sbjct: 86  VFCKSWPVGSIPGGMERHAYTLYTSLASRGHEIHVFTVSSDRSNREEYYNKGDLHVYFAP 145

Query: 143 NDHGSVNLN------------NDGAFDYVHTESVSLPHWRAKMVPN--VAVTWHGIWYEV 188
           N+HGS+N +            +  +FDYVHTESVSLPHWR KMVPN  +AVTWHGIWYE+
Sbjct: 146 NEHGSLNHSRAFEIFHKINSLDHHSFDYVHTESVSLPHWRVKMVPNGDIAVTWHGIWYEI 205

Query: 189 MHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQ 248
           MHS LF EL +++    P S  +LQ+ MPRLVDEIRFF  Y QHICISNSA EVLV IYQ
Sbjct: 206 MHSNLFQELSNDR----PSS--DLQQTMPRLVDEIRFFPKYKQHICISNSAREVLVNIYQ 259

Query: 249 LPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLLYE 307
           LP+R VHVI+NGVD+TKFV+ PE+G RF  K G+P N   +VMGV+GRLVRDKGHPLLYE
Sbjct: 260 LPKRKVHVIVNGVDQTKFVYSPESGARFRAKHGIPDNGTYIVMGVSGRLVRDKGHPLLYE 319

Query: 308 AFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR 367
           AF+ + + HP VYLLVAG+GPWG+RYAELG+NV+VLGALE  +LS FYNALDVFVNPTLR
Sbjct: 320 AFALLVKMHPKVYLLVAGSGPWGKRYAELGENVRVLGALEPEELSGFYNALDVFVNPTLR 379

Query: 368 PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPK 427
           PQGLDLT+IEAM CG+ V+ PNYPSIV TVVV+E  GYTFSPNV+S VE L+ V+RDGP+
Sbjct: 380 PQGLDLTIIEAMQCGKPVVAPNYPSIVGTVVVDERFGYTFSPNVRSLVETLDSVVRDGPR 439

Query: 428 VLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
           VL+ KG+ACK +ALSMFTAT+MASAYERFF+ MKN
Sbjct: 440 VLEMKGIACKGYALSMFTATQMASAYERFFMCMKN 474

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219398|ref|NP_177459.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|12324310|gb|AAG52119.1|AC010556_1 putative glycosyl transferase; 61173-59713 [Arabidopsis thaliana] gi|332197299|gb|AEE35420.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana]

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 294/455 (64%), Positives = 353/455 (77%), Gaps = 24/455 (5%)

Query: 24  VLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLA 83
           + ++ +F +S+Y+F S   + P       E   F GDLRD  F WNKL  GP  EKLKLA
Sbjct: 28  ITLAFIFCSSYYIFFSQFDYSPVTS--SPENPPFAGDLRDLTFPWNKLSLGPISEKLKLA 85

Query: 84  VFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVH-QGNLHVHFAA 142
           VF K+WP+G+ PGGMERHA TLY +LA+RGHEIHVFT  SDR    + + +G+LHV+FA 
Sbjct: 86  VFCKSWPVGSIPGGMERHAYTLYTSLASRGHEIHVFTVSSDRSNREEYYNKGDLHVYFAP 145

Query: 143 NDHGSVNLN------------NDGAFDYVHTESVSLPHWRAKMVPN--VAVTWHGIWYEV 188
           N+HGS+N +            +  +FDYVHTESVSLPHWR KMVPN  +AVTWHGIWYE+
Sbjct: 146 NEHGSLNHSRAFEIFHKINSLDHHSFDYVHTESVSLPHWRVKMVPNGDIAVTWHGIWYEI 205

Query: 189 MHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQ 248
           MHS LF EL +++    P S  +LQ+ MPRLVDEIRFF  Y QHICISNSA EVLV IYQ
Sbjct: 206 MHSNLFQELSNDR----PSS--DLQQTMPRLVDEIRFFPKYKQHICISNSAREVLVNIYQ 259

Query: 249 LPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLLYE 307
           LP+R VHVI+NGVD+TKFV+ PE+G RF  K G+P N   +VMGV+GRLVRDKGHPLLYE
Sbjct: 260 LPKRKVHVIVNGVDQTKFVYSPESGARFRAKHGIPDNGTYIVMGVSGRLVRDKGHPLLYE 319

Query: 308 AFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR 367
           AF+ + + HP VYLLVAG+GPWG+RYAELG+NV+VLGALE  +LS FYNALDVFVNPTLR
Sbjct: 320 AFALLVKMHPKVYLLVAGSGPWGKRYAELGENVRVLGALEPEELSGFYNALDVFVNPTLR 379

Query: 368 PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPK 427
           PQGLDLT+IEAM CG+ V+ PNYPSIV TVVV+E  GYTFSPNV+S VE L+ V+RDGP+
Sbjct: 380 PQGLDLTIIEAMQCGKPVVAPNYPSIVGTVVVDERFGYTFSPNVRSLVETLDSVVRDGPR 439

Query: 428 VLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
           VL+ KG+ACK +ALSMFTAT+MASAYERFF+ MKN
Sbjct: 440 VLEMKGIACKGYALSMFTATQMASAYERFFMCMKN 474

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839185|ref|XP_002887474.1| hypothetical protein ARALYDRAFT_316266 [Arabidopsis lyrata subsp. lyrata] gi|297333315|gb|EFH63733.1| hypothetical protein ARALYDRAFT_316266 [Arabidopsis lyrata subsp. lyrata]

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 291/452 (64%), Positives = 347/452 (76%), Gaps = 29/452 (6%)

Query: 29  LFFTSFYLFISPLRHVP---EPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLAVF 85
           +F +S+Y+  S L   P    PG        F GDLRD    WNKL  GP  EKLKLAVF
Sbjct: 33  IFCSSYYILFSRLDCSPVTSSPG-----NPPFAGDLRDLTSPWNKLSLGPISEKLKLAVF 87

Query: 86  SKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVH-QGNLHVHFAAND 144
            K+WP+G+ PGGMERHA TLY +LA+RGHEIHVFT  SDR    + + +G+LHV+FA N+
Sbjct: 88  CKSWPVGSIPGGMERHAYTLYTSLASRGHEIHVFTVSSDRSNREEYYNRGDLHVYFAPNE 147

Query: 145 HGSVNLNN-----------DGAFDYVHTESVSLPHWRAKMVPN--VAVTWHGIWYEVMHS 191
           HG++N +            D  FDYVHTESVSLPHWR KMVPN  +AVTWHGIWYE+MHS
Sbjct: 148 HGTLNHSQAFEIFHKINGLDHPFDYVHTESVSLPHWRVKMVPNGDIAVTWHGIWYEIMHS 207

Query: 192 KLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQ 251
            LF EL +++       +++LQ+ MPRLVDEIRFF  Y QHICISNSA EVLV IYQLP+
Sbjct: 208 NLFQELSNDR------PISDLQQTMPRLVDEIRFFPKYKQHICISNSAREVLVNIYQLPK 261

Query: 252 RNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVS-LVMGVAGRLVRDKGHPLLYEAFS 310
           RNVHVI+NGVD+TKFV+ PE+G RF  K GVP N + +VMGV+GRLVRDKGHPLLYEAF+
Sbjct: 262 RNVHVIVNGVDQTKFVYSPESGARFRVKHGVPDNGTFIVMGVSGRLVRDKGHPLLYEAFA 321

Query: 311 SITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG 370
            + + HP VYLLVAG+GPWG+RYAELG+NV+VLGAL+  +LS FYNALDVFVNPTLRPQG
Sbjct: 322 LLVKMHPQVYLLVAGSGPWGKRYAELGENVRVLGALKPEELSGFYNALDVFVNPTLRPQG 381

Query: 371 LDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQ 430
           LDLT+IEAM C + V+ PNYPSIV TVVV+E  GYTFSPNV+S VE L+ V+RDG  VL+
Sbjct: 382 LDLTIIEAMQCVKPVVVPNYPSIVGTVVVDERFGYTFSPNVRSLVETLDSVVRDGSIVLE 441

Query: 431 RKGLACKEHALSMFTATKMASAYERFFLRMKN 462
            KG+ACK +ALSMFTAT+MASAYERFF+ MKN
Sbjct: 442 MKGIACKVYALSMFTATRMASAYERFFMCMKN 473

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517395|ref|XP_003628986.1| Phosphatidylinositol alpha-mannosyltransferase [Medicago truncatula] gi|355523008|gb|AET03462.1| Phosphatidylinositol alpha-mannosyltransferase [Medicago truncatula]

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/478 (47%), Positives = 313/478 (65%), Gaps = 19/478 (3%)

Query: 1   MGLKHQSCRNSSSFSPLSLRYSTVLISALFFT--SFYLFISPLRHVPEPGFLKGEGKRFI 58
           M L ++S + +S   P +  + T L+  + FT  + +L  +P        F   + K + 
Sbjct: 1   MALNNKSKKPNS---PSNFYFFTTLLFIVLFTIPALFLLHTPTTSSICTTFTSHQSKTWS 57

Query: 59  GDLRDAKFSWNKLCF---GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHE 115
           GDL  A+F+WNKL F         LK+AVFS+ WPIG  PGGMERHA TL+ ALA RGH+
Sbjct: 58  GDLTLAEFAWNKLSFFQQKKPLSPLKIAVFSRKWPIGTTPGGMERHAYTLHTALAQRGHK 117

Query: 116 IHVFTAPSDRKPHNDVHQGN--LHVHFAANDHGSVNL--------NNDGAFDYVHTESVS 165
           +H+FT+P D K      QG   +H H   +D    N         N    FD +H+ESV+
Sbjct: 118 VHIFTSPQDEKTSIKTQQGYPFIHFHEGESDKWRYNKALEQYQEENKKEPFDVIHSESVA 177

Query: 166 LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNG-VLPGSMTELQEAMPRLVDEIR 224
           LPH+ A+ + N+ V+WHGI  E + S +F +L    +  + P     LQ  +P++++EIR
Sbjct: 178 LPHYVARNLSNLVVSWHGIALESLQSSIFQDLARRPDEPISPLFNNSLQGIVPKVLNEIR 237

Query: 225 FFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPA 284
           FF SY  H+ IS+S  E+L   YQ+P R VHVI+NGVDE +F  D E G +F  K+G+P+
Sbjct: 238 FFKSYAHHVAISDSCGEMLRDFYQIPTRRVHVIVNGVDEDEFGEDAELGRKFRTKIGIPS 297

Query: 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLG 344
           N SLV+GVAGRLV+DKGHPLL+EA+S +   HP VYL++AG+GPWG RY +LG  V VLG
Sbjct: 298 NASLVLGVAGRLVKDKGHPLLHEAYSKLITKHPNVYLIIAGSGPWGNRYKDLGNQVLVLG 357

Query: 345 ALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELG 404
           ++    L  FYNA+D+FVNPTLRPQGLDLTL+EAM  G+ +L   +PSI  T++V++E G
Sbjct: 358 SMSPSMLKAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTLLVDDEYG 417

Query: 405 YTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
           Y FSPNV+S +EAL+ V++DGP+ L R+G AC+E+A SMFTA KMA AYER FL +K+
Sbjct: 418 YMFSPNVESLLEALQAVVKDGPQRLARRGKACREYAASMFTAKKMALAYERLFLCIKD 475

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138428|ref|XP_002326600.1| predicted protein [Populus trichocarpa] gi|222833922|gb|EEE72399.1| predicted protein [Populus trichocarpa]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/463 (49%), Positives = 302/463 (65%), Gaps = 27/463 (5%)

Query: 25  LISALFFTSFYLFISP---LRHVPEPG----FLKGEGKRFIGDLRDAKFSWNKLCF---G 74
           L + LFF    LF  P   L H P        +    + + GDLR+A+F+WN+L F    
Sbjct: 21  LCTTLFFV--VLFTIPALFLLHAPTTSICTTLIANHARPWSGDLRNAEFAWNRLAFIENK 78

Query: 75  PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQG 134
           P   KLK+AVFS+ WP G  PGGMERHA TL+ ALA RGH++H+FT+P D    +  H  
Sbjct: 79  PPPVKLKIAVFSRKWPFGTTPGGMERHAYTLHTALAHRGHQVHIFTSPVDENSPSVSHAS 138

Query: 135 NL---HVHFAANDHGSVNLN---------NDGA--FDYVHTESVSLPHWRAKMVPNVAVT 180
            +    +HF   + G    N         N  A  FD VH+ESV+LP+W A+ VPN+AV+
Sbjct: 139 VISYPQIHFHEGEPGKWIHNKAWKQFEEENQRAKPFDVVHSESVALPYWLARRVPNLAVS 198

Query: 181 WHGIWYEVMHSKLFGELFSNQN-GVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSA 239
           WHGI  E + S +F +L    N  + P     LQ  +PR++DEIRFF  Y  H+ IS+S 
Sbjct: 199 WHGIALEGLQSSIFQDLARKPNEAITPYFNKSLQGFVPRVLDEIRFFKKYEHHVAISDSC 258

Query: 240 AEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD 299
            E+L  +YQ+P+R VHVI+NGVDE  F  D  +G  F  ++GVP N SLV+GVAGRLV+D
Sbjct: 259 GEMLRDVYQIPRRRVHVIVNGVDEDDFGEDVRSGHEFRSRIGVPVNASLVLGVAGRLVKD 318

Query: 300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALD 359
           KGHP+LYEAFS    +HP VYL+VAG+GPW +RY ELG  V VLG++   +L  FYN++D
Sbjct: 319 KGHPILYEAFSEFMTEHPDVYLIVAGSGPWEQRYKELGPRVLVLGSMNPSELRAFYNSID 378

Query: 360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALE 419
           +FVNPTLRPQGLDLTL+EAM  G+ V+   +PSI  T+VV++E G+ FSPNV+S +E LE
Sbjct: 379 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFSPNVESLLETLE 438

Query: 420 LVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
            V  +G + L ++G AC+++A SMFTA KMA AYER FL +KN
Sbjct: 439 AVAMEGSRRLAQRGKACRQYAASMFTARKMALAYERLFLCIKN 481

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529791|ref|XP_003533471.1| PREDICTED: uncharacterized protein LOC100785027 [Glycine max]

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/434 (50%), Positives = 295/434 (67%), Gaps = 26/434 (5%)

Query: 55  KRFIGDLRDAKFSWNKLCF---GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAA 111
           K + GDLR A+F+WNKL F    P+   LK+AVFS+ WPIG  PGGMERHA TL+ ALA 
Sbjct: 44  KTWSGDLRLAEFAWNKLPFLEHNPSPVPLKIAVFSRKWPIGTTPGGMERHAFTLHTALAQ 103

Query: 112 RGHEIHVFTAPSDRKPHNDV---HQGNL--------HVHFAANDHGS----------VNL 150
           RGH++H+FT+P   +  +D    HQ +         ++H    + G           +  
Sbjct: 104 RGHKVHIFTSPPQEESASDTTINHQADANANAPSSPYIHCHEGEPGKWRYNKAWEQFLEQ 163

Query: 151 NNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQN--GVLPGS 208
           N    FD VH+ESV+LPHW A+ +PN+AV+WHGI  E + S +F +L   Q+     P  
Sbjct: 164 NQKEPFDVVHSESVALPHWLARELPNLAVSWHGIALESLQSSIFQDLARTQHDEASSPDF 223

Query: 209 MTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH 268
              LQ  +P++++EIRFF  Y  H+ IS+S  E+L  +YQ+P+R VHVILNGVDE  F  
Sbjct: 224 DKGLQGVLPKILNEIRFFRKYAHHVAISDSCGEMLRDVYQIPKRRVHVILNGVDEDGFRE 283

Query: 269 DPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGP 328
           D E G  F  K+G+P+N SLV+GVAGRLV+DKGHPLL+EA+S +   +P VYL+VAG+GP
Sbjct: 284 DLELGKEFRTKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSMLITKYPNVYLIVAGSGP 343

Query: 329 WGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP 388
           W  RY +LG+ V VLG++    L  FYNA+D+FVNPTLRPQGLDLTL+EAM  G+ +L  
Sbjct: 344 WENRYRDLGRQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLAS 403

Query: 389 NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATK 448
            +PSI  +VVV++E G+ FSPNV+S +EAL+ V+++G + L R+G AC+E+A+SMFTATK
Sbjct: 404 RFPSIKGSVVVDDEFGFMFSPNVESLLEALQAVVKEGKERLARRGKACREYAISMFTATK 463

Query: 449 MASAYERFFLRMKN 462
           MA AYER FL +K 
Sbjct: 464 MALAYERLFLCIKE 477

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560861|ref|XP_003548705.1| PREDICTED: D-inositol-3-phosphate glycosyltransferase-like [Glycine max]

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/487 (46%), Positives = 308/487 (63%), Gaps = 34/487 (6%)

Query: 7   SCRNSSSFSPLSLRYSTVLISALFFTSFYLFISPLRHVPEPGFL-----KGEGKRFIGDL 61
           + ++  S SP +  + T L   + FT   LF   L H P    +       + K + GDL
Sbjct: 5   TTKSKKSTSPSNFYFCTTLFFIVLFTIPVLF---LLHAPTTTSICTTLASSQAKTWSGDL 61

Query: 62  RDAKFSWNKLCF---GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHV 118
           +  +F+WN+L F    P+   LK+AVFS+ WPIG  PGGMERHA TL+ ALA RGH++HV
Sbjct: 62  QLVEFAWNRLSFFEHNPSPFALKVAVFSRKWPIGTTPGGMERHAHTLHTALARRGHQVHV 121

Query: 119 FTAP------------SDRKPHNDVHQGNLHVHFAANDHGS----------VNLNNDGAF 156
           FT+P             +   H +    + ++HF   + G           V  N    F
Sbjct: 122 FTSPPEDESISVSSSEVNENKHQEGAPSSPYIHFHEGEPGRWRYNKAWEQFVEENQREPF 181

Query: 157 DYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVL-PGSMTELQEA 215
             VH+ESV+LPHW A+ + N+AV+WHGI  E + S +F +L   Q+  + P     +Q  
Sbjct: 182 HVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLTRRQDEPMSPLFNKSIQGV 241

Query: 216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVR 275
           +P++++EIRFF +Y  H+ IS+S  E+L  +YQ+P R VHVILNGVDE  F  D E G  
Sbjct: 242 VPKVLNEIRFFKNYAHHVAISDSCGEMLRDVYQIPNRRVHVILNGVDEDDFGEDVELGRE 301

Query: 276 FPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE 335
           F  K+G+P N SLV+GVAGRLV+DKGHPLL+EA+S +   HP VYL+VAG+GPW  RY +
Sbjct: 302 FRTKIGIPGNASLVLGVAGRLVKDKGHPLLHEAYSRLITKHPNVYLIVAGSGPWENRYRD 361

Query: 336 LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR 395
           LG  V VLG++    L  FYNA+D+FVNPTLRPQGLDLTL+EAM  G+ +L   +PSI  
Sbjct: 362 LGSQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKG 421

Query: 396 TVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYER 455
           T+VV++E GY FSPNV+S  EALE V+++GP+ L R+G AC+E+A  MFTA KMA AYER
Sbjct: 422 TIVVDDEYGYMFSPNVESLQEALEAVVKEGPQRLARRGKACREYAAKMFTARKMALAYER 481

Query: 456 FFLRMKN 462
            FL +K+
Sbjct: 482 LFLCIKD 488

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302759971|ref|XP_002963408.1| glycosyltransferase, CAZy family GT4 [Selaginella moellendorffii] gi|300168676|gb|EFJ35279.1| glycosyltransferase, CAZy family GT4 [Selaginella moellendorffii]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/430 (51%), Positives = 287/430 (66%), Gaps = 28/430 (6%)

Query: 59  GDLRDAKFSWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHV 118
           GDLR  + +WN+LCFGP  E+L++A+F K WP+G  PGG+ERHA TL+  LAARGHEIHV
Sbjct: 51  GDLRQMEAAWNRLCFGPIQERLRIALFVKKWPVGGVPGGLERHALTLHRNLAARGHEIHV 110

Query: 119 FTAPS-----------DRKPHNDVHQGNLHVHFAANDHG-------------SVNLNNDG 154
           +T+ +           D++ H +  +G LHVHF+  + G             + N  + G
Sbjct: 111 YTSAAAGSDNPEELLDDQQDHGE--RGLLHVHFSRPNAGGGFDYHRAWDQFLADNSTHPG 168

Query: 155 AFDYVHTESVSLPHWRAKMV-PNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTE-L 212
            FD VH+ESV+LPHW+A+++  N+A +WHGI YE++HS L  +L           +   L
Sbjct: 169 GFDIVHSESVALPHWKAQLLGSNLAASWHGIGYEIIHSDLVQDLVRKPGEPRSADLQRSL 228

Query: 213 QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA 272
            E + R+ DEI+FF SY  H+  S+   +VL  IY++P RNVH ILNGVDE++F    +A
Sbjct: 229 GERLTRVADEIKFFPSYRHHVATSDYVGDVLQTIYEIPLRNVHTILNGVDESRFRPSLDA 288

Query: 273 GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRR 332
           G  F  K GVP N SLV G AGRLVRDKGHPLL+EAFS I   HPGV+LLVAG GPWG R
Sbjct: 289 GSAFRRKYGVPVNASLVFGAAGRLVRDKGHPLLFEAFSRIAARHPGVFLLVAGHGPWGDR 348

Query: 333 YAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS 392
           Y EL  N K LG ++   L++FYNALDVFVNPTLR QGLD TL+EAM CG+ +L  ++ S
Sbjct: 349 YRELAPNAKTLGPMDPAHLADFYNALDVFVNPTLRSQGLDHTLLEAMQCGKPLLATHFSS 408

Query: 393 IVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA 452
           I  +VVV+ + G+TFSPNV S  +A+E VI  G   ++RKG  C+++A  MFTATKM +A
Sbjct: 409 ITWSVVVSSDFGHTFSPNVDSLEQAMEAVIAQGRDTMRRKGELCRDYASLMFTATKMGAA 468

Query: 453 YERFFLRMKN 462
           YER FL MKN
Sbjct: 469 YERLFLCMKN 478

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	465
TAIR|locus:2032702	486	AT1G73160 [Arabidopsis thalian	0.926	0.886	0.652	1.7e-155
TAIR|locus:2122920	516	AT4G19460 [Arabidopsis thalian	0.662	0.596	0.517	4e-106
TAIR|locus:2153281	505	AT5G59070 [Arabidopsis thalian	0.544	0.500	0.511	1.5e-89
UNIPROTKB|F1NHQ4	477	PIGA "Uncharacterized protein"	0.658	0.641	0.286	4.1e-12
TIGR_CMR|CPS_5001	365	CPS_5001 "glycosyl transferase	0.503	0.641	0.263	2.1e-11
UNIPROTKB|E1B7B9	485	PIGA "Uncharacterized protein"	0.658	0.630	0.274	4.2e-11
UNIPROTKB|K7GPP7	449	PIGA "Uncharacterized protein"	0.658	0.681	0.277	4.7e-11
UNIPROTKB|P37287	484	PIGA "Phosphatidylinositol N-a	0.653	0.628	0.276	9.2e-11
TIGR_CMR|CPS_4999	367	CPS_4999 "glycosyl transferase	0.556	0.705	0.243	1.3e-10
UNIPROTKB|O53279	414	MT3116 "Glycogen synthase" [My	0.739	0.830	0.266	6.6e-10

TAIR|locus:2032702 AT1G73160 [Arabidopsis thaliana (taxid:3702)]

 Score = 1516 (538.7 bits), Expect = 1.7e-155, P = 1.7e-155
 Identities = 297/455 (65%), Positives = 354/455 (77%)

Query:    24 VLISALFFTSFYLFISPLRHVPEPGFLKGEGKRFIGDLRDAKFSWNKLCFGPTFEKLKLA 83
             + ++ +F +S+Y+F S   + P       E   F GDLRD  F WNKL  GP  EKLKLA
Sbjct:    28 ITLAFIFCSSYYIFFSQFDYSPVTS--SPENPPFAGDLRDLTFPWNKLSLGPISEKLKLA 85

Query:    84 VFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVH-QGNLHVHFAA 142
             VF K+WP+G+ PGGMERHA TLY +LA+RGHEIHVFT  SDR    + + +G+LHV+FA 
Sbjct:    86 VFCKSWPVGSIPGGMERHAYTLYTSLASRGHEIHVFTVSSDRSNREEYYNKGDLHVYFAP 145

Query:   143 NDHGSVN----------LNN--DGAFDYVHTESVSLPHWRAKMVPN--VAVTWHGIWYEV 188
             N+HGS+N          +N+    +FDYVHTESVSLPHWR KMVPN  +AVTWHGIWYE+
Sbjct:   146 NEHGSLNHSRAFEIFHKINSLDHHSFDYVHTESVSLPHWRVKMVPNGDIAVTWHGIWYEI 205

Query:   189 MHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQ 248
             MHS LF EL SN     P S  +LQ+ MPRLVDEIRFF  Y QHICISNSA EVLV IYQ
Sbjct:   206 MHSNLFQEL-SNDR---PSS--DLQQTMPRLVDEIRFFPKYKQHICISNSAREVLVNIYQ 259

Query:   249 LPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVS-LVMGVAGRLVRDKGHPLLYE 307
             LP+R VHVI+NGVD+TKFV+ PE+G RF  K G+P N + +VMGV+GRLVRDKGHPLLYE
Sbjct:   260 LPKRKVHVIVNGVDQTKFVYSPESGARFRAKHGIPDNGTYIVMGVSGRLVRDKGHPLLYE 319

Query:   308 AFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR 367
             AF+ + + HP VYLLVAG+GPWG+RYAELG+NV+VLGALE  +LS FYNALDVFVNPTLR
Sbjct:   320 AFALLVKMHPKVYLLVAGSGPWGKRYAELGENVRVLGALEPEELSGFYNALDVFVNPTLR 379

Query:   368 PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPK 427
             PQGLDLT+IEAM CG+ V+ PNYPSIV TVVV+E  GYTFSPNV+S VE L+ V+RDGP+
Sbjct:   380 PQGLDLTIIEAMQCGKPVVAPNYPSIVGTVVVDERFGYTFSPNVRSLVETLDSVVRDGPR 439

Query:   428 VLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
             VL+ KG+ACK +ALSMFTAT+MASAYERFF+ MKN
Sbjct:   440 VLEMKGIACKGYALSMFTATQMASAYERFFMCMKN 474

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2122920 AT4G19460 [Arabidopsis thaliana (taxid:3702)]

 Score = 840 (300.8 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
 Identities = 161/311 (51%), Positives = 218/311 (70%)

Query:   151 NNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLP-GSM 209
             N    FD VH+ESV+LPHW A+ VPN+AV+WHGI  E + S ++ +L    +     G  
Sbjct:   195 NKKEPFDAVHSESVALPHWIAREVPNLAVSWHGIALESLQSSIYQDLIRKPDEPRSQGFN 254

Query:   210 TELQEA-MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH 268
               L  A +P+++DEIRFF +Y  HI IS+S  E+L  +YQ+P++ VHVILNGVDE  F  
Sbjct:   255 ASLYGAVLPKILDEIRFFHNYAHHIAISDSCGEMLRDVYQIPEKRVHVILNGVDENGFTS 314

Query:   269 DPEAGVRFPEKLGVPANVS-LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG 327
             D +    F  KLG+P N S +V+G AGRLV+DKGHPLL+EAF+ I + +  VYL+VAG+G
Sbjct:   315 DKKLRTLFRSKLGLPENSSAIVLGAAGRLVKDKGHPLLFEAFAKIIQTYSNVYLVVAGSG 374

Query:   328 PWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLT 387
             PW +RY ELG+ V +LG+L  ++L  FYN +D+FVNPTLRPQGLDLTL+EAM  G+ V+ 
Sbjct:   375 PWEQRYKELGEKVSILGSLNPNELKGFYNGIDLFVNPTLRPQGLDLTLMEAMLSGKPVMA 434

Query:   388 PNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTAT 447
               Y SI RT+VVN+E G+ F+PNV++    +E+ + +G + L  +G  CKE+A  MFTA+
Sbjct:   435 SRYASIKRTIVVNDEFGFMFAPNVEALTAVMEVAVAEGAERLAERGRKCKEYAAEMFTAS 494

Query:   448 KMASAYERFFL 458
             KMA AYER FL
Sbjct:   495 KMALAYERLFL 505

GO:0005634 "nucleus" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2153281 AT5G59070 [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
 Identities = 134/262 (51%), Positives = 171/262 (65%)

Query:   206 PGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETK 265
             P S   L E   R+V+E++FF  Y  H+  S+   +VL +IY +P+  VH+ILNGVDE  
Sbjct:   232 PPSSPALTERAKRVVEEVKFFQRYAHHVATSDHCGDVLKRIYMIPEERVHIILNGVDENV 291

Query:   266 FVHDPEAGVRFPEKLGVPANVS----LVMGVAGRLVRDKGHPLLYEAFSSITRDHP---- 317
             F  D      F EK GV +  +    LV+G+AGRLVRDKGHPL++ A   +  ++     
Sbjct:   292 FKPDVSKRESFREKFGVRSGKNKKSPLVLGIAGRLVRDKGHPLMFSALKRVFEENKEARE 351

Query:   318 GVYLLVAGTGPWGRRYAELGQ-NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLI 376
              V +LVAG GPWG RY +LG  NV VLG L+  +L+ FYNA+DVFVNPTLR QGLD TL+
Sbjct:   352 NVVVLVAGDGPWGNRYKDLGSTNVIVLGPLDQEKLAGFYNAIDVFVNPTLRAQGLDHTLL 411

Query:   377 EAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLAC 436
             EAM  G+ VL     SI  +VVV   LGYTFSPNV+S  EA+  V+ DG + LQRKG   
Sbjct:   412 EAMVSGKPVLATRLASITGSVVVGPHLGYTFSPNVESLTEAILRVVSDGTEELQRKGKEA 471

Query:   437 KEHALSMFTATKMASAYERFFL 458
             +E +L +FTATKMA +YERFFL
Sbjct:   472 RERSLRLFTATKMADSYERFFL 493

GO:0005886 "plasma membrane" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|F1NHQ4 PIGA "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 192 (72.6 bits), Expect = 4.1e-12, P = 4.1e-12
 Identities = 97/339 (28%), Positives = 140/339 (41%)

Query:    96 GGMERHASTLYHALAARGHEIHVFT-APSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDG 154
             GG+E H   L   L  RGH++ V T A   RK    +  G L V++       V  N   
Sbjct:    21 GGVESHIYQLSQCLIERGHKVLVVTHAYGSRKGVRYLTNG-LKVYYLPL---RVMYNQST 76

Query:   155 AFDYVHTESVSLPHWRAKMV-PNVAVTW-HGIWYEVMHSKLFGELFSNQNGVLPG-SMTE 211
             A    H    SLP  R   V   V +   H  +  + H  LF         V    S+  
Sbjct:    77 ATTLFH----SLPLLRYIFVRERVTIVHAHSSFSAMAHDALFHAKTMGLRTVFTDHSLFG 132

Query:   212 LQEAMPRLVDEIRFFS--SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD 269
               +    L +++   S    N  IC+S ++ E  V    L  R V VI N VD T F  D
Sbjct:   133 FADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALDPRIVSVIPNAVDPTDFTPD 192

Query:   270 PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW 329
             P    R  +     + V++V  V  RLV  KG  LL      + + +P ++ LV G GP 
Sbjct:   193 PS---RRDD-----STVTIV--VVSRLVYRKGIDLLSGIIPELCQKYPELHFLVGGEGPK 242

Query:   330 G------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR 383
                    R   +L   V++LGALE   + +      +F+N +L  +   + ++EA  CG 
Sbjct:   243 RIVLEEVRERYQLHDRVRLLGALEHQDVRDVLVQGHIFLNTSLT-EAFCMAIVEAASCGL 301

Query:   384 TVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI 422
              V++     I    V+ E L     P+VKS  + LE  I
Sbjct:   302 QVVSTRVGGIPE--VLPENLIILCEPSVKSLCDGLEKAI 338

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

TIGR_CMR|CPS_5001 CPS_5001 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 183 (69.5 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 65/247 (26%), Positives = 111/247 (44%)

Query:   219 LVDEIRFFSSYNQHIC-ISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD-PEAGVRF 276
             L  +I +F+     I  +S    +++ +     +  +  I NGV  T F    P+   + 
Sbjct:   124 LTTKINYFTLQKSKIIGVSADITQIMQQWIAKNKSPIEYIANGVSLTAFKEQIPKELAK- 182

Query:   277 PEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRR---Y 333
              EKL +  +   V G+  RL   K H LL +A ++I++  P + L++ G GP   +   Y
Sbjct:   183 -EKLSISQSTFCV-GIVARLSEPKDHLLLIDAIAAISKTFPDIKLIIVGGGPLQNKIETY 240

Query:   334 AELGQNVKVLGAL-EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS 392
              +      ++  L E   ++   NALDVF   T   +G+ +T++EAM     V+  N   
Sbjct:   241 IKANHLENIVTMLGERKDIANILNALDVFAL-TSSSEGIPMTILEAMAANLPVIATNVGG 299

Query:   393 IVRTVVVNEELGYTFSPNVKS-FVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS 451
             I + VV+N E G       K+  + A+E  I+  PK L   G   +    S ++  +   
Sbjct:   300 IPQ-VVLNNETGILVENKDKAGLITAIESFIKS-PKKLTEYGKQGRLLLESNYSINQAIE 357

Query:   452 AYERFFL 458
              YE  +L
Sbjct:   358 KYECIYL 364

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|E1B7B9 PIGA "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 183 (69.5 bits), Expect = 4.2e-11, P = 4.2e-11
 Identities = 93/339 (27%), Positives = 139/339 (41%)

Query:    96 GGMERHASTLYHALAARGHEIHVFT-APSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDG 154
             GG+E H   L   L  RGH++ + T A  +RK    +  G L V++       V  N   
Sbjct:    47 GGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTNG-LKVYYLPL---KVMYNQST 102

Query:   155 AFDYVHTESVSLPHWRAKMV-PNVAVTW-HGIWYEVMHSKLF-GELFSNQNGVLPGSMTE 211
             A    H    SLP  R   V   V +   H  +  + H  LF  +    Q      S+  
Sbjct:   103 ATTLFH----SLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFG 158

Query:   212 LQEAMPRLVDEIRFFS--SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD 269
               +    L +++   S    N  IC+S ++ E  V    L    V VI N VD T F  D
Sbjct:   159 FADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPD 218

Query:   270 PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW 329
             P    R  + +     +++V  V  RLV  KG  LL      + + +P +  ++ G GP 
Sbjct:   219 P---FRRHDSI-----ITIV--VVSRLVYRKGTDLLSGIIPELCQKYPDLKFIIGGEGPK 268

Query:   330 G------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR 383
                    R   +L   V++LGALE   +        +F+N +L  +   + ++EA  CG 
Sbjct:   269 RIILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLT-EAFCMAIVEAASCGL 327

Query:   384 TVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI 422
              V++     I    V+ E L     P+VKS  E LE  I
Sbjct:   328 QVVSTRVGGIPE--VLPENLIILCEPSVKSLCEGLEKAI 364

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

UNIPROTKB|K7GPP7 PIGA "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 182 (69.1 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 94/339 (27%), Positives = 138/339 (40%)

Query:    96 GGMERHASTLYHALAARGHEIHVFT-APSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDG 154
             GG+E H   L   L  RGH++ + T A  +RK    +  G L V++       V  N   
Sbjct:    11 GGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTNG-LKVYYLPL---KVMYNQST 66

Query:   155 AFDYVHTESVSLPHWRAKMV-PNVAVTW-HGIWYEVMHSKLF-GELFSNQNGVLPGSMTE 211
             A    H    SLP  R   V   V +   H  +  + H  LF  +    Q      S+  
Sbjct:    67 ATTLFH----SLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFG 122

Query:   212 LQEAMPRLVDEIRFFS--SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD 269
               +    L +++   S    N  IC+S ++ E  V    L    V VI N VD T F  D
Sbjct:   123 FADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPD 182

Query:   270 PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW 329
             P     F     V   +++V  V  RLV  KG  LL      + + +P +  ++ G GP 
Sbjct:   183 P-----FRRHDSV---ITIV--VVSRLVYRKGTDLLSGIIPELCQKYPDLNFVIGGEGPK 232

Query:   330 G------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR 383
                    R   +L   V++LGALE   +        +F+N +L  +   + ++EA  CG 
Sbjct:   233 RIILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLT-EAFCMAIVEAASCGL 291

Query:   384 TVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI 422
              V++     I    V+ E L     P+VKS  E LE  I
Sbjct:   292 QVVSTRVGGIPE--VLPESLIILCEPSVKSLCEGLEKAI 328

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

UNIPROTKB|P37287 PIGA "Phosphatidylinositol N-acetylglucosaminyltransferase subunit A" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 9.2e-11, P = 9.2e-11
 Identities = 94/340 (27%), Positives = 138/340 (40%)

Query:    96 GGMERHASTLYHALAARGHEIHVFT-APSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDG 154
             GG+E H   L   L  RGH++ + T A  +RK    +  G L V++       V  N   
Sbjct:    47 GGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSG-LKVYYLPL---KVMYNQST 102

Query:   155 AFDYVHTESVSLPHWRAKMV-PNVAVTW-HGIWYEVMHSKLF-GELFSNQNGVLPGSMTE 211
             A    H    SLP  R   V   V +   H  +  + H  LF  +    Q      S+  
Sbjct:   103 ATTLFH----SLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFG 158

Query:   212 LQEAMPRLVDEIRFFS--SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD 269
               +    L +++   S    N  IC+S ++ E  V    L    V VI N VD T F  D
Sbjct:   159 FADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPD 218

Query:   270 PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW 329
             P     F        + S+ + V  RLV  KG  LL      + + +P +  ++ G GP 
Sbjct:   219 P-----FRR------HDSITIVVVSRLVYRKGIDLLSGIIPELCQKYPDLNFIIGGEGPK 267

Query:   330 G-------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG 382
                      RY +L   V++LGALE   +        +F+N +L  +   + ++EA  CG
Sbjct:   268 RIILEEVRERY-QLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLT-EAFCMAIVEAASCG 325

Query:   383 RTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI 422
               V++     I    V+ E L     P+VKS  E LE  I
Sbjct:   326 LQVVSTRVGGIPE--VLPENLIILCEPSVKSLCEGLEKAI 363

GO:0016021 "integral to membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA;TAS

GO:0006506 "GPI anchor biosynthetic process" evidence=TAS

GO:0009893 "positive regulation of metabolic process" evidence=TAS

GO:0017176 "phosphatidylinositol N-acetylglucosaminyltransferase activity" evidence=TAS

GO:0006501 "C-terminal protein lipidation" evidence=TAS

GO:0008194 "UDP-glycosyltransferase activity" evidence=TAS

GO:0016254 "preassembly of GPI anchor in ER membrane" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

TIGR_CMR|CPS_4999 CPS_4999 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 70/287 (24%), Positives = 128/287 (44%)

Query:   194 FGELFSNQNGVLPGSMT-------ELQEAMPRLVDE-IRFFSSYNQHICISNSAAEVLVK 245
             F +L+++  GV  G  T       +L +  P +V++ I+ F+S+   + +S+    +L  
Sbjct:    91 FSQLYASIAGVTCGIKTVATFHRSDLSKYQPNMVNKLIKLFASH--FVAVSHDRLSLLTN 148

Query:   246 IYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPL 304
               +LP    HV+  G V E K         R    LG+P +  +++ + G L   KGH  
Sbjct:   149 NLKLPLNKCHVVHGGSVIEKKPTVTSINKAR--ADLGIPLDQLMLLSI-GHLGEIKGHQD 205

Query:   305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYA--------ELGQNVKVLGALEAHQLSEFYN 356
                A S  T+  P ++L +AG G    +          ++ +NV  LG +  +    +  
Sbjct:   206 TLVALSKFTKTMPALHLYIAGDGAAQEKQKLTELVNKLQINENVTFLGQI--NNAFSWLE 263

Query:   357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVE 416
             A D+F+ P++  +   L  +EA    + V+      I + ++V++E G    P+    VE
Sbjct:   264 ACDIFIQPSVE-EAFGLVFVEAGAKAKPVIATTVGGI-KEIIVSKETGLLVLPSSPKAVE 321

Query:   417 -ALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462
              AL ++I + P + Q+ G    +     F+ T M + Y   F +  N
Sbjct:   322 HALAILI-NSPPLRQQYGENGYKRITEHFSLTNMVNKYTDIFNQAVN 367

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|O53279 MT3116 "Glycogen synthase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 171 (65.3 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 107/401 (26%), Positives = 173/401 (43%)

Query:    96 GGMERHASTLYHALAARGHEIHVFT-APSDRKP--H---NDVHQGNLHVHFAANDHGSVN 149
             GG+ RH   L  ALAA GH++ V +  PS   P  H   ++V +G + V  AA D     
Sbjct:    16 GGLGRHVHHLSTALAAAGHDVVVLSRCPSGTDPSTHPSSDEVTEG-VRVIAAAQDPHEFT 74

Query:   150 LNNDG-AFDYVHTESVSLPHWRAKMV-------PNV--AVTW---HGI-----WYEV-MH 190
               ND  A+      ++     R K +       P+V  A  W   H       +Y+V M 
Sbjct:    75 FGNDMMAWTLAMGHAMIRAGLRLKKLGTDRSWRPDVVHAHDWLVAHPAIALAQFYDVPMV 134

Query:   191 SKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLP 250
             S +        +G + G+++    A+   +  +R   S    I  S S  + + +++   
Sbjct:   135 STIHATEAGRHSGWVSGALSRQVHAVESWL--VRESDSL---ITCSASMNDEITELFGPG 189

Query:   251 QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG-HPLLYEAF 309
                + VI NG+D  ++   P A  R P + G PA +  V    GRL  +KG H  +  A 
Sbjct:   190 LAEITVIRNGIDAARW---PFAARR-P-RTG-PAELLYV----GRLEYEKGVHDAI-AAL 238

Query:   310 SSITRDHPGVYLLVAGTGP---W----GRRYAELGQNVKVLGALEAHQLSEFYNALDVFV 362
               + R HPG  L +AG G    W     R++  L +  + +G L+  +L    +  D  V
Sbjct:   239 PRLRRTHPGTTLTIAGEGTQQDWLIDQARKHRVL-RATRFVGHLDHTELLALLHRADAAV 297

Query:   363 NPT-LRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALEL 420
              P+   P GL    +EA   G  ++T N   +   V+ N + G + +P +V     A+  
Sbjct:   298 LPSHYEPFGL--VALEAAAAGTPLVTSNIGGLGEAVI-NGQTGVSCAPRDVAGLAAAVRS 354

Query:   421 VIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK 461
             V+ D P   QR+  A ++   S F    +A+A  + +L  K
Sbjct:   355 VL-DDPAAAQRRARAARQRLTSDFDWQTVATATAQVYLAAK 394

GO:0005978 "glycogen biosynthetic process" evidence=IMP

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IMP

GO:0040007 "growth" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	465
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	7e-59
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	4e-38
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	8e-35
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	1e-29
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	3e-27
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	5e-26
cd03795	357	cd03795, GT1_like_4, This family is most closely r	1e-25
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	4e-25
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	2e-24
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	8e-24
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	3e-20
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	7e-20
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	5e-19
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	1e-17
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	2e-17
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	6e-17
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	9e-17
cd03812	358	cd03812, GT1_CapH_like, This family is most closel	4e-16
cd03814	364	cd03814, GT1_like_2, This family is most closely r	4e-15
cd03825	365	cd03825, GT1_wcfI_like, This family is most closel	6e-15
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	1e-14
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	3e-14
cd03796	398	cd03796, GT1_PIG-A_like, This family is most close	8e-14
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	1e-13
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	4e-13
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	2e-12
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	3e-11
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	6e-11
cd04955	363	cd04955, GT1_like_6, This family is most closely r	6e-11
TIGR04157	406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	2e-10
cd04962	371	cd04962, GT1_like_5, This family is most closely r	1e-09
pfam13439	171	pfam13439, Glyco_transf_4, Glycosyltransferase Fam	1e-09
PRK15484	380	PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety	2e-09
TIGR04047	373	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M	6e-09
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	8e-09
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	1e-08
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	1e-08
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	5e-08
cd03813	475	cd03813, GT1_like_3, This family is most closely r	9e-08
TIGR04005	406	TIGR04005, wcaL, colanic acid biosynthesis glycosy	7e-05
PRK15179	694	PRK15179, PRK15179, Vi polysaccharide biosynthesis	9e-05
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	2e-04
pfam13579	158	pfam13579, Glyco_trans_4_4, Glycosyl transferase 4	3e-04
cd03805	392	cd03805, GT1_ALG2_like, This family is most closel	6e-04
cd03792	372	cd03792, GT1_Trehalose_phosphorylase, Trehalose ph	0.001
cd03818	396	cd03818, GT1_ExpC_like, This family is most closel	0.003

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  197 bits (503), Expect = 7e-59
 Identities = 108/400 (27%), Positives = 165/400 (41%), Gaps = 50/400 (12%)

Query: 81  KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHF 140
           K+ + +  +P   + GG ERH   L  ALAARGHE+ V T      P  +   G + V  
Sbjct: 1   KILLVTPEYP--PSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRP 58

Query: 141 AANDHGSVNLNNDGA------------FDYVHTES--VSLPHWRAKMVPNVAV--TWHGI 184
                    L                 FD VH       L    A  +  + +  T HG+
Sbjct: 59  PPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGL 118

Query: 185 WYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLV 244
            +    ++L   L                        E R     ++ I +S +  E L 
Sbjct: 119 EFGRPGNELGLLLK------------------LARALERRALRRADRIIAVSEATREELR 160

Query: 245 KIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPL 304
           ++  +P   + VI NGVD  +F   P A      +LG+P +   V+   GRLV  KG  L
Sbjct: 161 ELGGVPPEKITVIPNGVDTERFRPAPRA---ARRRLGIPED-EPVILFVGRLVPRKGVDL 216

Query: 305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYAE------LGQNVKVLGALEAHQLSEFYNAL 358
           L EA + + +++P V L++ G GP             LG  V  LG +    L   Y A 
Sbjct: 217 LLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAA 276

Query: 359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEA 417
           DVFV P+L  +G  L L+EAM  G  V+  +   I   VV + E G    P + ++  EA
Sbjct: 277 DVFVLPSLY-EGFGLVLLEAMAAGLPVVASDVGGI-PEVVEDGETGLLVPPGDPEALAEA 334

Query: 418 LELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF 457
           +  ++ D P++ +R G A +E     F+  ++A+  E  +
Sbjct: 335 ILRLLDD-PELRRRLGEAARERVAERFSWDRVAARTEEVY 373

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  142 bits (360), Expect = 4e-38
 Identities = 98/401 (24%), Positives = 145/401 (36%), Gaps = 79/401 (19%)

Query: 96  GGMERHASTLYHALAARGHEIHVFT------APSDRKPHNDVHQGNLHVH---------- 139
           GG       L  ALA RG E+ V           D      V    L V           
Sbjct: 14  GGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGP 73

Query: 140 ----FAANDHGSVNLNNDGAFDYVHTESVSLPHW------------RAKMVPNVAVTWHG 183
                AA     +        D +H       H+            R   +P + VT HG
Sbjct: 74  LLYLLAARALLKLLKLKRFRPDLIHA------HFAYPDGFAAALLKRKLGIP-LVVTLHG 126

Query: 184 IWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVL 243
               ++  K                   L+ A+ R  D +         I +S + A+ L
Sbjct: 127 SDVNLLPRKRLLRAL-------------LRRAL-RRADAV---------IAVSEALADEL 163

Query: 244 VKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP 303
             +  +    V VI NGVD  +F     A  R   KLG+P +   V+   GRLV  KG  
Sbjct: 164 KALG-IDPEKVTVIPNGVDTERFSPADRAEAR---KLGLPED-KKVILFVGRLVPRKGID 218

Query: 304 LLYEAFSSITRDHPGVYLLVAGTGP------WGRRYAELGQNVKVLGALEAHQLSEFYNA 357
            L EA + + +  P V+L++ G GP             L   V  LGA+   ++  +Y A
Sbjct: 219 YLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAA 278

Query: 358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVE 416
            DVFV P+LR +G  L L+EAM CG  V+  +   I   ++ + E G    P + ++  E
Sbjct: 279 ADVFVLPSLR-EGFGLVLLEAMACGLPVVATDVGGI-PEIITDGENGLLVPPGDPEALAE 336

Query: 417 ALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF 457
           A+  ++ D    L R            F+   +A      +
Sbjct: 337 AILRLLADPWLRLGRAAR---RRVAERFSWENVAERLLELY 374

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  132 bits (335), Expect = 8e-35
 Identities = 75/245 (30%), Positives = 111/245 (45%), Gaps = 22/245 (8%)

Query: 224 RFFSSYNQH-ICISNSAAEVLVKI-YQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLG 281
           R  SS+    +  S +AAE    I Y  P + + VI NGVD  +F  D +A  R  E+LG
Sbjct: 131 RLLSSFIPLIVANSAAAAEYHQAIGY--PPKKIVVIPNGVDTERFSPDLDARARLREELG 188

Query: 282 VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE------ 335
           +P +   ++G+  RL   K H  L  A + + +  P   LL+ G GP  R   E      
Sbjct: 189 LPEDT-FLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGP-DRANLELLALKE 246

Query: 336 --LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI 393
             L   V +LG      +    NALDVFV  +   +G    L+EAM CG  V+  +    
Sbjct: 247 LGLEDKVILLGERS--DVPALLNALDVFVLSS-LSEGFPNVLLEAMACGLPVVATDVGDN 303

Query: 394 VRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA 452
              V    + G+   P + ++  EA+E ++ D P + Q  G A +E     F+   M  A
Sbjct: 304 AELV---GDTGFLVPPGDPEALAEAIEALLAD-PALRQALGEAARERIEENFSIEAMVEA 359

Query: 453 YERFF 457
           YE  +
Sbjct: 360 YEELY 364

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score =  119 bits (298), Expect = 1e-29
 Identities = 93/400 (23%), Positives = 153/400 (38%), Gaps = 38/400 (9%)

Query: 81  KLAVFSKTWPIGAAPGGMERHASTLYHALAA--RGHEIHVFTAPSDRKPHNDVHQGNLHV 138
           K+ +     P     GG+ER+   L  AL    RGHE+ V           +V +     
Sbjct: 2   KILILIIYPPPR--VGGIERYVLELAKALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVS 59

Query: 139 HFAANDHGSVN-------LNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHS 191
                             L     +D +H  S+ L      +   +           +H 
Sbjct: 60  LPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSL-LLAPGGLLALLLLKLLGIPLVVTLHG 118

Query: 192 KLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQ 251
            +   L   +  +L G +  L + +     +       ++ I +S +  E+L  +     
Sbjct: 119 LIPRILLLPRLLLLLGLLRLLLKRL-----KKALRLLADRVIAVSPALKELLEALG--VP 171

Query: 252 RNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSS 311
             + VI NG+D  KF       +    K         V+   GRL  +KG  LL EA + 
Sbjct: 172 NKIVVIPNGIDTEKFAPARIGLLPEGGKF--------VVLYVGRLDPEKGLDLLIEAAAK 223

Query: 312 ITRDHPGVYLLVAGTGPWGRRYAE-------LGQNVKVLGALEAHQLSEFYNALDVFVNP 364
           + +  P + L++ G GP  R   E       L  NVK LG +   +L+E   + DVFV P
Sbjct: 224 LKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLP 283

Query: 365 TLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIR 423
           +L   G  L L+EAM  G  V+  +   I   VV + E G    P +V+   +ALE ++ 
Sbjct: 284 SLSE-GFGLVLLEAMAAGTPVIASDVGGI-PEVVEDGETGLLVPPGDVEELADALEQLLE 341

Query: 424 DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP 463
           D P++ +  G A +E     F+  ++A      +  +   
Sbjct: 342 D-PELREELGEAARERVEEEFSWERIAEQLLELYEELLAE 380

Length = 381

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  111 bits (281), Expect = 3e-27
 Identities = 96/394 (24%), Positives = 147/394 (37%), Gaps = 68/394 (17%)

Query: 91  IGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNL 150
           I    GG+      L  AL A G+E+HV   P D     ++    + V     D   +N 
Sbjct: 5   IVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE--ELEALGVKVIPIPLDRRGINP 62

Query: 151 NND-------------GAFDYVHTESV------SLPHWRAKMVPNVAVTWHGIWYEVMHS 191
             D                D VHT +        L    A  VP V  T HG+ +     
Sbjct: 63  FKDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAG-VPKVIYTVHGLGF----- 116

Query: 192 KLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQH-ICISNSAAEVLVKIYQLP 250
                +F++      G    L   +       R    +    I  +    ++ +K+  + 
Sbjct: 117 -----VFTS-----GGLKRRLYLLL------ERLALRFTDKVIFQNEDDRDLALKLGIIK 160

Query: 251 QRNVHVIL-NGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAF 309
           ++   +I  +GVD  +F   PE     PE          V     RL++DKG   L EA 
Sbjct: 161 KKKTVLIPGSGVDLDRFSPSPE---PIPED-------DPVFLFVARLLKDKGIDELLEAA 210

Query: 310 SSITRDHPGVYLLVAGTGPWGRRYAE-------LGQNVKVLGALEAHQLSEFYNALDVFV 362
             +    P V LL+ G G      A        L   V+ LG      + E   A DVFV
Sbjct: 211 RILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFR--DDVPELLAAADVFV 268

Query: 363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELV 421
            P+ R +GL   L+EAM  GR V+  + P   R  V++   G+   P + ++  +A+E +
Sbjct: 269 LPSYR-EGLPRVLLEAMAMGRPVIATDVPG-CREAVIDGVNGFLVPPGDAEALADAIERL 326

Query: 422 IRDGPKVLQRKGLACKEHALSMFTATKMASAYER 455
           I D P++  R G A ++ A   F    +      
Sbjct: 327 IED-PELRARMGQAARKRAEEEFDEEIVVKKLLE 359

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  108 bits (271), Expect = 5e-26
 Identities = 71/380 (18%), Positives = 124/380 (32%), Gaps = 58/380 (15%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNN--- 152
           GG ER    L + L  RG+++ +     +      +      +        S+       
Sbjct: 12  GGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAIL 71

Query: 153 -------DGAFDYVHTESVSLPH----WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQ 201
                      D V +   + P+      A++   + V  H      +  KL        
Sbjct: 72  RLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELKRKLR------- 124

Query: 202 NGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV 261
                            L+   + +   ++ + +S    E L+K+  +P   + VI N +
Sbjct: 125 ----------------LLLLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPI 168

Query: 262 DETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL 321
           D  +     E  +        P     V+   GRL   KG   L  AF+ + ++ P   L
Sbjct: 169 DIEEIRALAEEPLELGIPPDGP-----VILAVGRLSPQKGFDTLIRAFALLRKEGPDARL 223

Query: 322 LVAGTGP---WGRRYAE---LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL 375
           ++ G GP        A+   L   V  LG         +  A D+FV  +   +G    L
Sbjct: 224 VILGDGPLREELEALAKELGLADRVHFLGFQS--NPYPYLKAADLFVLSSRY-EGFPNVL 280

Query: 376 IEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLA 435
           +EAM  G  V+  + P   R ++ + E G    P       AL         +L    L 
Sbjct: 281 LEAMALGTPVVATDCPGP-REILEDGENGL-LVPVGD--EAALAAAALALLDLLLDPELR 336

Query: 436 CKEHALSMFTATKMASAYER 455
                L+     ++A  Y +
Sbjct: 337 ---ERLAAAARERVAREYSK 353

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  107 bits (269), Expect = 1e-25
 Identities = 91/395 (23%), Positives = 142/395 (35%), Gaps = 71/395 (17%)

Query: 85  FSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND 144
             K +P     GG+E+    L   LAARG E+ V  A    +P     + N H    A  
Sbjct: 5   VGKFYPP--DRGGIEQVIRDLAEGLAARGIEVAVLCA--SPEPKGRDEERNGHRVIRAPS 60

Query: 145 HGSVNLNNDGAFDY-------------VHTESVSLP----HWRAKMVPN---VAVTWHGI 184
             +V      +  +             +H   +  P         ++P    V V WH  
Sbjct: 61  LLNVAST-PFSPSFFKQLKKLAKKADVIH---LHFPNPLADLALLLLPRKKPVVVHWHS- 115

Query: 185 WYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLV 244
             +++  KL  +L+       P     LQ    R  D I           ++ S      
Sbjct: 116 --DIVKQKLLLKLYR------P-----LQRRFLRRADAI-----------VATSPNYAET 151

Query: 245 KIYQLP-QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP 303
                  +  V VI  G+D  ++            +         V    GRLV  KG  
Sbjct: 152 SPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRAAGRPFFLFV----GRLVYYKGLD 207

Query: 304 LLYEAFSSITRDHPGVYLLVAGTGP---WGRRYAE---LGQNVKVLGALEAHQLSEFYNA 357
           +L EA        P   L++ G GP        A    L   V+ LG L+  + +    A
Sbjct: 208 VLLEA----AAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAA 263

Query: 358 LDVFVNP-TLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFV 415
            DVFV P   R +   + L+EAM  G+ V++    +    V ++   G    P +  +  
Sbjct: 264 CDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALA 323

Query: 416 EALELVIRDGPKVLQRKGLACKEHALSMFTATKMA 450
           EA+  ++ D P++ +R G A +E A   FTA +M 
Sbjct: 324 EAIRRLLED-PELRERLGEAARERAEEEFTADRMV 357

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  105 bits (265), Expect = 4e-25
 Identities = 95/388 (24%), Positives = 151/388 (38%), Gaps = 56/388 (14%)

Query: 96  GGMERHASTLYHALAARGHEIHVFT-APSDRKPHNDVH---------QGNLHVHFAANDH 145
            G+      L   L  RGHE++V   +        +V                       
Sbjct: 14  NGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIP 73

Query: 146 GSVNLNNDG-AFDYVHTESVSLPHWRAKMV------PNVAVTWHGIWYEVMHSKLFGELF 198
            ++ +       D VHT +          V      P VA T+H ++ +  H    G L 
Sbjct: 74  RALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVA-TYHTMYEDYTHYVPLGRLL 132

Query: 199 SNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVL----VKIYQLPQRNV 254
           +               A+ R     RF++  +  I  S   A++L    VK      R +
Sbjct: 133 AR--------------AVVRRKLSRRFYNRCDAVIAPSEKIADLLREYGVK------RPI 172

Query: 255 HVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITR 314
            VI  G+D  +F  +P  G     KLG+P +   V+   GRL ++K    L  AF+ + +
Sbjct: 173 EVIPTGIDLDRF--EPVDGDDERRKLGIPED-EPVLLYVGRLAKEKNIDFLIRAFARLLK 229

Query: 315 DHPGVYLLVAGTGPWGRRYAE------LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRP 368
           + P V L++ G GP      E      L   V   G +   +L ++Y A D+FV  +   
Sbjct: 230 EEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTE 289

Query: 369 -QGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPK 427
            QG  L L+EAM  G  V+  + P  +  +V + E G+ F P  ++  EAL L +   P+
Sbjct: 290 TQG--LVLLEAMAAGLPVVAVDAPG-LPDLVADGENGFLFPPGDEALAEAL-LRLLQDPE 345

Query: 428 VLQRKGLACKEHALSMFTATKMASAYER 455
           + +R     +E A     A K+   YE 
Sbjct: 346 LRRRLSKNAEESAEKFSFAKKVEKLYEE 373

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score =  103 bits (259), Expect = 2e-24
 Identities = 81/376 (21%), Positives = 133/376 (35%), Gaps = 79/376 (21%)

Query: 108 ALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLN------------NDGA 155
           AL A GHE+ +F   S R P + +         A   + + +L                 
Sbjct: 23  ALEAAGHEVEIF---SLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLG 79

Query: 156 FDYVHTESVSLPHWRAKMV------PNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSM 209
            D++H    + P     M+         + T HG   ++  S    +L            
Sbjct: 80  IDHIHAHFGTTP-ATVAMLASRLGGIPYSFTAHG--KDIFRSPDAIDL------------ 124

Query: 210 TELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD 269
                     +    F       + IS    + L+++       +HV+  GVD       
Sbjct: 125 -------DEKLARADFV------VAISEYNRQQLIRLLGCDPDKIHVVHCGVDLE----- 166

Query: 270 PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW 329
                RFP +   P    L +   GRLV  KG   L EA + +        L + G GP 
Sbjct: 167 -----RFPPRPPPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL 221

Query: 330 GRRYAE------LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ-----GLDLTLIEA 378
                       L   V +LGA    ++ E   A D+FV P++        GL + L+EA
Sbjct: 222 RDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEA 281

Query: 379 MHCGRTVLTPNY---PSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGL 434
           M  G  V++ +    P +V     + E G    P + ++  +A+E ++ D P++ +  G 
Sbjct: 282 MAMGLPVISTDVSGIPELVE----DGETGLLVPPGDPEALADAIERLLDD-PELRREMGE 336

Query: 435 ACKEHALSMFTATKMA 450
           A +      F   K A
Sbjct: 337 AGRARVEEEFDIRKQA 352

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score = 97.0 bits (242), Expect = 8e-24
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 9/146 (6%)

Query: 289 VMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRY------AELGQNVKV 342
           ++   GRLV +KG  LL EAF+ +   HP + L++ G G   ++         L  NV  
Sbjct: 4   IILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIF 63

Query: 343 LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEE 402
           +G +    L E Y   D+FV P+   +G  L L+EAM  G  V+  +       +V + E
Sbjct: 64  VGFVPDEDLIELYRIADLFVLPSRY-EGFGLVLLEAMAAGVPVIATDVGGPAE-IVKDGE 121

Query: 403 LGYTFSP-NVKSFVEALELVIRDGPK 427
            G    P + ++  EA+E +++D   
Sbjct: 122 TGLLVDPGDAEALAEAIEKLLKDEEL 147

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 91.5 bits (228), Expect = 3e-20
 Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 16/230 (6%)

Query: 233 ICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVR---FPEKLGVPANVSLV 289
           I +SN  A+ + + Y +    + VI  GVD  +F        R      +  +P    ++
Sbjct: 129 IAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVI 188

Query: 290 MGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG-PWGRRYAELGQNVKVLGALEA 348
           + + GRL R KG  +  EA + + +D P V+LL+ G        YAEL + +K LG L+ 
Sbjct: 189 L-LPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLG-LQD 246

Query: 349 H--------QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN 400
                     +   Y   D+ V+ +  P+    T +EA   GR V+  ++    R  V  
Sbjct: 247 RVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG-ARETVRP 305

Query: 401 EELGYTFSPN-VKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKM 449
            E G    P   ++  +AL+ ++   P+   +     +    ++F+  +M
Sbjct: 306 GETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM 355

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 90.5 bits (225), Expect = 7e-20
 Identities = 87/384 (22%), Positives = 132/384 (34%), Gaps = 53/384 (13%)

Query: 92  GAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGS---- 147
              P G+ R+A  L  AL     E  +   P          +  L +             
Sbjct: 11  SRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLL 70

Query: 148 -------VNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSN 200
                    L      D +H+   + P  R + VP V VT H +         F E FS 
Sbjct: 71  FLLRAGDRLLLLLLGLDLLHSPHNTAPLLRLRGVPVV-VTIHDLIPL-----RFPEYFS- 123

Query: 201 QNGVLPGSMTELQEAMPRLV---DEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVI 257
                PG     +  + R +   D I         I +S +    L++   +P   + VI
Sbjct: 124 -----PGFRRYFRRLLRRALRRADAI---------ITVSEATKRDLLRYLGVPPDKIVVI 169

Query: 258 LNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP 317
             GVD  +F   P           +P    L   V     R K    L EAF+ +    P
Sbjct: 170 PLGVDP-RFRPPPAEAEVLRALYLLPRPYFLY--VGTIEPR-KNLERLLEAFARLPAKGP 225

Query: 318 GVYLLVAGTGPWG-------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG 370
              L++ G   W         R   LG  V+ LG +   +L+  Y     FV P+L  +G
Sbjct: 226 DPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLY-EG 284

Query: 371 LDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVL 429
             L ++EAM CG  V+  N  S+   V    +    F P + ++   A+E ++ D P + 
Sbjct: 285 FGLPVLEAMACGTPVIASNISSL-PEVA--GDAALYFDPLDPEALAAAIERLLED-PALR 340

Query: 430 QRKGLACKEHALSMFTATKMASAY 453
           +         A   F+  K A   
Sbjct: 341 EELRERGLARA-KRFSWEKTARRT 363

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 87.7 bits (218), Expect = 5e-19
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 18/188 (9%)

Query: 218 RLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFP 277
           RL D   F S    ++  S  A +  +           V+ NG+D  +F  DP   ++  
Sbjct: 125 RLTD---FLSDLTTNV--SKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIR 179

Query: 278 EKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE-- 335
             LGV  +  +++ V GRLV  K +P L +AF+ +  D+  + LL+AG GP  R   E  
Sbjct: 180 NALGVKNDTFVILAV-GRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-RATLERL 237

Query: 336 -----LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNY 390
                L   VK+LG  +   ++ +YNA D+FV  +   +G  L + EAM C   V+  + 
Sbjct: 238 IKALGLSNRVKLLGLRD--DIAAYYNAADLFVLSSAW-EGFGLVVAEAMACELPVVATDA 294

Query: 391 PSIVRTVV 398
              VR VV
Sbjct: 295 GG-VREVV 301

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 84.1 bits (209), Expect = 1e-17
 Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 22/237 (9%)

Query: 235 ISNSAAEV--LVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGV 292
           I+++  E   L  +Y    R + V+  GVD  +F     A  R   +L    +   ++ V
Sbjct: 168 IASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARR-ARLLRDPDKPRILAV 226

Query: 293 AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAG----------TGPWGRRYAELG--QNV 340
            GRL   KG   L  A++ +        L++ G                   ELG    V
Sbjct: 227 -GRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRV 285

Query: 341 KVLGALEAHQLSEFYNALDVFVNPTL-RPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVV 399
              G +    L   Y A DVFVNP L  P G  LT +EAM CG  V+           VV
Sbjct: 286 DFPGRVSREDLPALYRAADVFVNPALYEPFG--LTALEAMACGLPVVATAVGGPRDI-VV 342

Query: 400 NEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYER 455
           +   G    P + ++   AL  ++ D P + +R   A    A + +T  ++A+    
Sbjct: 343 DGVTGLLVDPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLLE 398

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 83.0 bits (206), Expect = 2e-17
 Identities = 71/354 (20%), Positives = 121/354 (34%), Gaps = 66/354 (18%)

Query: 93  AAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLN- 151
              GG ER  S L +ALA +GHE+ + +      P  ++      +         +    
Sbjct: 10  GNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPKIKVIDLGDKRDSKLLARF 69

Query: 152 ----------NDGAFDYV----HTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGEL 197
                      +   D V     +    L     K+V  + V+ H           + + 
Sbjct: 70  KKLRRLRKLLKNNKPDVVISFLTSLLTFLASLGLKIVKLI-VSEH------NSPDAYKKR 122

Query: 198 FSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVI 257
                          +    R  D +         + ++          Y+   +NV VI
Sbjct: 123 LRRLL--------LRRLLYRRA-DAV---------VVLTEEDRA---LYYKKFNKNVVVI 161

Query: 258 LNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP 317
            N +         E       K         ++ V GRLV  KG  LL EA++ I + HP
Sbjct: 162 PNPL----PFPPEEPSSDLKSKR--------ILAV-GRLVPQKGFDLLIEAWAKIAKKHP 208

Query: 318 GVYLLVAGTGPWGRRY------AELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL 371
              L + G GP             L   V +LG      + E+Y    +FV  + R +G 
Sbjct: 209 DWKLRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTS-RFEGF 265

Query: 372 DLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRD 424
            + L+EAM  G  V++ + P+    ++ +   G      +V++  EAL  ++ D
Sbjct: 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED 319

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 81.6 bits (202), Expect = 6e-17
 Identities = 81/386 (20%), Positives = 137/386 (35%), Gaps = 52/386 (13%)

Query: 96  GGMERHASTLYHALAARGHEIHVFT----APSDRKPHNDVHQGNLHVHFAANDHGSVNLN 151
           GG  R    L  ALA  GHE+ V T            N V      ++ A          
Sbjct: 14  GGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVA-----YGLNL 68

Query: 152 NDGAFDYVHTESVSLPHWRAKMV--PNVAVTWHGIW-----YEVMHSKLFG-ELFSNQNG 203
               F        SL  W    +   ++    HG+W          ++ +G     + +G
Sbjct: 69  ARYLFPP------SLLAWLRLNIREADIVHV-HGLWSYPSLAAARAARKYGIPYVVSPHG 121

Query: 204 VLPGSMTELQEAMPR--LVDEIRFFSSYNQHI----CISNSAAEVLVKIYQL-PQRNVHV 256
           +L         A+P   L   + +F    + +     +  ++ +   +I +L  +  + V
Sbjct: 122 MLDPW------ALPHKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLGLKAPIAV 175

Query: 257 ILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDH 316
           I NGVD   F   P  G R   K  +  +  +++   GRL   KG  LL EAF+ +    
Sbjct: 176 IPNGVDIPPFAALPSRGRR--RKFPILPDKRIIL-FLGRLHPKKGLDLLIEAFAKLAERF 232

Query: 317 PGVYLLVAGTGPWG--------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRP 368
           P  +L++AG    G             L   V   G L     +      D+FV P+   
Sbjct: 233 PDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPS-HS 291

Query: 369 QGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKV 428
           +   + + EA+ CG  V+T +        ++    G+    +V +   AL   +   P+ 
Sbjct: 292 ENFGIVVAEALACGTPVVTTDKVPWQE--LIEYGCGWVVDDDVDALAAALRRALEL-PQR 348

Query: 429 LQRKGLACKEHALSMFTATKMASAYE 454
           L+  G   +      F+ T +A    
Sbjct: 349 LKAMGENGRALVEERFSWTAIAQQLL 374

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 81.1 bits (201), Expect = 9e-17
 Identities = 63/226 (27%), Positives = 89/226 (39%), Gaps = 27/226 (11%)

Query: 233 ICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGV 292
           I +S    + L+ +   P   VHV   GVD  KF     A    P  L V          
Sbjct: 147 IAVSQFIRDRLLAL-GFPPEKVHVHPIGVDTAKFTPATPARRP-PRILFV---------- 194

Query: 293 AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG---RRYAE---LGQNVKVLGAL 346
            GR V  KG  LL EAF+ + R  P V L++ G GP        A    LG  V  LGA 
Sbjct: 195 -GRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQ 253

Query: 347 EAHQLSEFYNALDVFVNPTLRP-----QGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNE 401
              ++ E      +F+ P++       +GL + L+EA   G  V+   +  I    V + 
Sbjct: 254 PHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGI-PEAVEDG 312

Query: 402 ELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA 446
           E G      +V +   AL  ++ D P +  R G A +      F  
Sbjct: 313 ETGLLVPEGDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDL 357

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 79.2 bits (196), Expect = 4e-16
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 15/167 (8%)

Query: 223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFP-EKLG 281
                    ++  S  A + L    ++  +   VI NG+D  KF+ + E  +R    +LG
Sbjct: 132 KLINRLATDYLACSEEAGKWLFG--KVKNKKFKVIPNGIDLEKFIFNEE--IRKKRRELG 187

Query: 282 VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG---RRYAE--- 335
           +  +   V+G  GR    K H  L E F+ + + +P   LL+ G G      ++  +   
Sbjct: 188 ILED-KFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELG 246

Query: 336 LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG 382
           L   V  LG    + + E   A+DVF+ P+L  +GL L LIEA   G
Sbjct: 247 LEDKVIFLG--VRNDVPELLQAMDVFLFPSLY-EGLPLVLIEAQASG 290

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 76.1 bits (188), Expect = 4e-15
 Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 19/217 (8%)

Query: 224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVP 283
            F +  ++ +  S S A+ L        R V +   GVD   F H          +LG P
Sbjct: 140 WFHNRADRVLVPSPSLADEL---RARGFRRVRLWPRGVDTELF-HPRRRDEALRARLGPP 195

Query: 284 ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVL 343
                V+   GRL  +K    L +A   + R  P V L++ G GP   R      NV  L
Sbjct: 196 DRP--VLLYVGRLAPEKNLEALLDADLPL-RRRPPVRLVIVGDGPARARLEARYPNVHFL 252

Query: 344 GALEAHQLSEFYNALDVFVNP----TLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVV 399
           G L+  +L+  Y + DVFV P    T    G  L ++EAM  G  V+ P+       +V 
Sbjct: 253 GFLDGEELAAAYASADVFVFPSRTETF---G--LVVLEAMASGLPVVAPDAGG-PADIVT 306

Query: 400 NEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLA 435
           + E G    P + ++F  AL  ++ D P++ +R    
Sbjct: 307 DGENGLLVEPGDAEAFAAALAALLAD-PELRRRMAAR 342

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 75.7 bits (187), Expect = 6e-15
 Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 24/232 (10%)

Query: 233 ICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV-HDPEAGVRFPEKLGVPANVSLV-M 290
           +  S   A+            + VI NG+D T F   D     R  ++LG+PA+  ++  
Sbjct: 140 VAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKRE-AR--KRLGLPADKKIILF 196

Query: 291 GVAGRLVRDKGHPLLYEAFSSI-TRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGAL-EA 348
           G  G     KG   L EA   +  R    + L+V G         +L   V  LG+L + 
Sbjct: 197 GAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASD-PEIPPDLPFPVHYLGSLNDD 255

Query: 349 HQLSEFYNALDVFVNPTLR---PQGLDLTLIEAMHCGRTVL---TPNYPSIVRTVVVNEE 402
             L+  Y+A DVFV P+L+   P     T IEA+ CG  V+       P IV     +  
Sbjct: 256 ESLALIYSAADVFVVPSLQENFPN----TAIEALACGTPVVAFDVGGIPDIVD----HGV 307

Query: 403 LGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY 453
            GY   P + +   E +E ++ D P   +  G A +E A + F +   A  Y
Sbjct: 308 TGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAENEFDSRVQAKRY 358

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 70.5 bits (173), Expect = 1e-14
 Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 288 LVMGVAGRLVRDKG-HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGAL 346
           + +G  G      G   LL EA   + +  P V L + G+GP     A L  NV  LG +
Sbjct: 3   VFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGP--EELARLAPNVHFLGFV 60

Query: 347 EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYT 406
           E   L+    + DV + P     G  L L+EA+  G  V+          +  +   G  
Sbjct: 61  E--DLAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVAT--DIGAEGLPEDLGWGVL 116

Query: 407 FSPNVKSFVEALELVIRD 424
            + + + F EA+  ++ D
Sbjct: 117 VADDPEEFAEAIVRLLAD 134

Length = 134

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 73.8 bits (182), Expect = 3e-14
 Identities = 85/410 (20%), Positives = 133/410 (32%), Gaps = 78/410 (19%)

Query: 95  PGGMERHASTLYHALAARGHEIHVFTAP------SDRKPHNDVHQGNLHVH----FAAND 144
            GG     + L   L  RGHE+ V T           K +       + VH         
Sbjct: 13  LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKK 72

Query: 145 HGSVN----------------LNNDGAFDYVHTESVSLP----------HWRAKMVPNVA 178
           +G +                 L      D +   S  L              A  V  V 
Sbjct: 73  NGLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV- 131

Query: 179 VTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNS 238
                +W E   +            +L   + +L+  + R  D I         + IS  
Sbjct: 132 ---RDLWPESAVALGL----LKNGSLLYRLLRKLERLIYRRADAI---------VVISPG 175

Query: 239 AAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLV----MGVAG 294
             E LV+    P++ + VI NGVD   F   P A     ++LG+     ++    +G A 
Sbjct: 176 MREYLVRRGVPPEK-ISVIPNGVDLELF-KPPPADESLRKELGLDDKFVVLYAGNIGRAQ 233

Query: 295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGP----WGRRYAELG-QNVKVLGALEAH 349
            L        L EA + + +D P +  L+ G GP           LG  NV  LG +   
Sbjct: 234 GL------DTLLEAAALL-KDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKE 286

Query: 350 QLSEFYNALDVFVNPTLRPQGLDLT----LIEAMHCGRTVLTPNYPSIVRTVVVNEELGY 405
           +L E   A DV + P       +      L E M  G+ VL  +       +V     G 
Sbjct: 287 ELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLA-SVDGESAELVEEAGAGL 345

Query: 406 TFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYE 454
              P + ++   A+  ++ D P+     G   + +    F+  K+A    
Sbjct: 346 VVPPGDPEALAAAILELLDD-PEERAEMGENGRRYVEEKFSREKLAERLL 394

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 72.6 bits (179), Expect = 8e-14
 Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 26/215 (12%)

Query: 224 RFFSSYNQH-ICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGV 282
           RF  +   H IC+S+++ E  V    L    V VI N VD + F  DP    R  +K   
Sbjct: 139 RFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK--RDNDK--- 193

Query: 283 PANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQ---- 338
                + + V  RLV  KG  LL      I + HP V  ++ G GP   +   L +    
Sbjct: 194 -----ITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP---KRILLEEMREK 245

Query: 339 -----NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI 393
                 V++LGA+   ++ +      +F+N +L  +   + ++EA  CG  V++     I
Sbjct: 246 YNLQDRVELLGAVPHERVRDVLVQGHIFLNTSL-TEAFCIAIVEAASCGLLVVSTRVGGI 304

Query: 394 VRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKV 428
               V+  ++     P+V+S V  LE  I      
Sbjct: 305 PE--VLPPDMILLAEPDVESIVRKLEEAISILRTG 337

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 71.5 bits (176), Expect = 1e-13
 Identities = 87/393 (22%), Positives = 132/393 (33%), Gaps = 77/393 (19%)

Query: 94  APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHV--------------- 138
           + GG E  A  L  ALA RGHE+ V TA  D    +    G +                 
Sbjct: 13  SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRD 72

Query: 139 HFAANDHGSVNLNNDGA-------FDYVHTESV---SLPHWRA--KMVPNVAVTWHGIWY 186
            F  +D+ +  +  + A        D VH   +    +   RA       + +T H  W 
Sbjct: 73  LFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWL 132

Query: 187 EVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI 246
                 LF       + V                            I  S    +  V  
Sbjct: 133 ICPRQGLF---KKGGDAV----------------------------IAPSRFLLDRYVA- 160

Query: 247 YQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY 306
             L    + VI NG+D  +                 P    L  G  G+L   KG  LL 
Sbjct: 161 NGLFAEKISVIRNGIDLDRAKRPRR----------APPGGRLRFGFIGQLTPHKGVDLLL 210

Query: 307 EAFSSITRDHPGVYLLVAGTGPWGRRY---AELGQNVKVLGALEAHQLSEFYNALDVFVN 363
           EAF  + R    + L++ G G          E    V+ LGA    ++ +FY  +DV V 
Sbjct: 211 EAFKRLPR--GDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVV 268

Query: 364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVI 422
           P++ P+   L + EA+  G  V+  +   +   +V +   G  F P + +    ALE +I
Sbjct: 269 PSIWPENFPLVIREALAAGVPVIASDIGGMAE-LVRDGVNGLLFPPGDAEDLAAALERLI 327

Query: 423 RDGPKVLQRKGLACKEHALSMFTATKMASAYER 455
            D P +L+R     +        A +    Y  
Sbjct: 328 DD-PDLLERLRAGIEPPRSIEDQAEEYLKLYRS 359

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 69.6 bits (171), Expect = 4e-13
 Identities = 84/386 (21%), Positives = 131/386 (33%), Gaps = 83/386 (21%)

Query: 89  WPIGA-APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVH----------QGNLH 137
            P+   A GG ER  + L   L ARGHE+ +F A  D K    +                
Sbjct: 11  EPVPPPAYGGTERVVAALTEGLVARGHEVTLF-ASGDSKTAAPLVPVVPEPLRLDAPGRD 69

Query: 138 VHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGEL 197
              A     +      G FD VH  S+ LP   A+ +P   VT        +H     EL
Sbjct: 70  RAEAEALALAERALAAGDFDIVHNHSLHLPLPFARPLPVPVVT-------TLHGPPDPEL 122

Query: 198 FSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVI 257
                           +       ++ F       + IS++           P   V  +
Sbjct: 123 ---------------LKLYYAARPDVPF-------VSISDAQRRPW-----PPLPWVATV 155

Query: 258 LNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG-HPLLYEAFSSITRDH 316
            NG+D   +      G           +  L +G   R+  +KG H  +  A  +     
Sbjct: 156 HNGIDLDDYPFRGPKG-----------DYLLFLG---RISPEKGPHLAIRAARRA----- 196

Query: 317 PGVYLLVAG---TGPWGRRYAE----LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ 369
            G+ L +AG      +  R        G +++ LG +   + +E        + P L  +
Sbjct: 197 -GIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEE 255

Query: 370 GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVL 429
              L +IEAM CG  V+     + V  VV +   G+    +V+    A+    R     L
Sbjct: 256 PFGLVMIEAMACGTPVIAFRRGA-VPEVVEDGVTGF-LVDSVEELAAAVARADR-----L 308

Query: 430 QRKGLACKEHALSMFTATKMASAYER 455
            R   AC+  A   F+A +M   Y  
Sbjct: 309 DRA--ACRRRAERRFSAARMVDDYLA 332

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 68.2 bits (167), Expect = 2e-12
 Identities = 70/247 (28%), Positives = 103/247 (41%), Gaps = 35/247 (14%)

Query: 231 QHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVP--ANVSL 288
            ++ +S    + L    ++P   +H I NGVD  +F   P  G R    L     A+ S+
Sbjct: 139 HYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERF--HPSRGDR-SPILPPDFFADESV 195

Query: 289 VMGVAGRLVRDKGHPLLYEAFSSITR----DHPGVYLLVAGTGPWGR-------RYAELG 337
           V+G  GRL   K  P L  AF+ + R        + L++ G GP  R       R A L 
Sbjct: 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP-ARGACEQMVRAAGLA 254

Query: 338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTV 397
             V + G  E   +     ALD+FV P+L  +G+  T++EAM  G        P I   V
Sbjct: 255 HLVWLPG--ERDDVPALMQALDLFVLPSL-AEGISNTILEAMASG-------LPVIATAV 304

Query: 398 VVNEEL------GYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA 450
             N EL      G    P +  +   AL+  + D P   +  G A +  A   F+   M 
Sbjct: 305 GGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMV 363

Query: 451 SAYERFF 457
           +AY   +
Sbjct: 364 AAYAGLY 370

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 35/236 (14%)

Query: 233 ICISNSAAEVLVKIY-QLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMG 291
           I +S    E ++K Y  L    VHVI NG+D  ++  D    V   ++ G+  +   ++ 
Sbjct: 149 IAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVL--DRYGIDRSRPYILF 206

Query: 292 VAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGA------ 345
           V GR+ R KG P L +A   I +D   V    A   P      E+ + V+   A      
Sbjct: 207 V-GRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTP------EVAEEVRQAVALLDRNR 259

Query: 346 ---------LEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRT 396
                    L   +L E  +  +VFV P++  + L +  +EAM CG  V+      I   
Sbjct: 260 TGIIWINKMLPKEELVELLSNAEVFVCPSIY-EPLGIVNLEAMACGTPVVASATGGI-PE 317

Query: 397 VVVNEELGYTFSPN-------VKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT 445
           VVV+ E G+   P+            +A+ +++ D P++ ++ G+A ++ A   F+
Sbjct: 318 VVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAKKMGIAGRKRAEEEFS 372

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 61.9 bits (150), Expect = 6e-11
 Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 8/127 (6%)

Query: 268 HDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG 327
            +       P  L   +         GRL  +KG   L EAF+ +    P + L++AG G
Sbjct: 85  VNRSLLEGVPLSLLALSIGLADKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDG 144

Query: 328 PWGRRYAE------LGQNVKVLGALEAHQ-LSEFYNALDVFVNPTLRPQGLDLTLIEAMH 380
           P      E      L   V  LG L+  + L+    A DVFV P+LR  G  L ++EAM 
Sbjct: 145 PEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLRE-GFGLVVLEAMA 203

Query: 381 CGRTVLT 387
           CG  V+ 
Sbjct: 204 CGLPVIA 210

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 63.4 bits (155), Expect = 6e-11
 Identities = 85/401 (21%), Positives = 130/401 (32%), Gaps = 82/401 (20%)

Query: 91  IGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVN- 149
           I A  GG E     L   L ARGHE+ V+      K     + G   +H  A + G +  
Sbjct: 10  IPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLIHIPAPEIGGLGT 69

Query: 150 -----------LNNDGAFDYVHTESVSLPHW----RAKMVPNVAVTWHGI-W----YEVM 189
                      L      D+VH    ++  +    R K    V V   G+ W    +   
Sbjct: 70  IIYDILAILHALFVKRDIDHVHALGPAIAPFLPLLRLKGKKVV-VNMDGLEWKRAKWGRP 128

Query: 190 HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQL 249
             +     F  +  V             +  D +         I  S    E L + Y  
Sbjct: 129 AKRYL--KFGEKLAV-------------KFADRL---------IADSPGIKEYLKEKYG- 163

Query: 250 PQRNVHVILNGVDETKFVHDPEAGVRFPEKLGV-PANVSLVMGVAGRLVRDKGHPLLYEA 308
             R+   I  G D      + E      +K G+ P    L++G   R+V +     L EA
Sbjct: 164 --RDSTYIPYGADHVVSSEEDE----ILKKYGLEPGRYYLLVG---RIVPENNIDDLIEA 214

Query: 309 FSSITRDHPGVYLLVAG----TGPWGRRYAEL---GQNVKVLGAL-EAHQLSEFYNALDV 360
           FS          L++ G      P+G+   E       +  +G + +   L     A  +
Sbjct: 215 FSKSNSGKK---LVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYA-AL 270

Query: 361 FVNPTLRPQGLDLTLIEAMHCGRTVL----TPNYPSIVRTVVVNEELGYTFSPNVKSFVE 416
           F        G + +L+EAM  G  VL      N     R V+   +    F         
Sbjct: 271 FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN-----REVL--GDKAIYFK-VGDDLAS 322

Query: 417 ALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF 457
            LE +  D  +V      A +E     +T  K+A  YE  +
Sbjct: 323 LLEELEADPEEV-SAMAKAARERIREKYTWEKIADQYEELY 362

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363

>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 18/251 (7%)

Query: 220 VDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPE 278
             E   F   ++ IC+S     +L + Y +P+  + VI NG  DE  ++       +  +
Sbjct: 161 EREKEMFQLADRVICLSQYTQNLLYEDYGIPKEKIVVIYNGLTDEAIYL-SEVERKKLRK 219

Query: 279 KLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQ 338
           KLG   +  +++ V GRL   KG   L EAF  + +  P   L++ G G + R   E  +
Sbjct: 220 KLGFSEDEKIILFV-GRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGDYSRYLQECKK 278

Query: 339 ---NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR 395
               +   G L+  +L E Y   DV V P+   Q      IE M  G  ++      +  
Sbjct: 279 IWSKITFTGKLDKEKLYELYQIADVGVLPSFHEQ-CSYVAIEMMMHGLPLIGTTSTGLSE 337

Query: 396 TVVVNEELGYTF---------SPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA 446
            ++ +   GY             + K  V+ L L +       ++ G   +   L  ++ 
Sbjct: 338 -MIEDGLNGYKIPIKEYRDYVELDKKELVQKL-LKLLSSSDEAKQMGKNARRRYLEKYSL 395

Query: 447 TKMASAYERFF 457
             M    +  +
Sbjct: 396 EVMRENMKSLY 406

Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 59.6 bits (145), Expect = 1e-09
 Identities = 92/383 (24%), Positives = 157/383 (40%), Gaps = 53/383 (13%)

Query: 102 ASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDY-VH 160
           A+ L  ALA RGHE+H  T  S R    D +  N+  H        V +     F Y  +
Sbjct: 18  ATELGKALARRGHEVHFIT--SSRPFRLDEYSPNIFFH-------EVEVPQYPLFQYPPY 68

Query: 161 TESVSLPHWRAKMVPNVAVTWHGI-----WYEVMHSK---LFGELFSNQN----GVLPGS 208
             +++     +K+   VA   + +      Y V H+    L  E+   ++      L G+
Sbjct: 69  DLALA-----SKIA-EVAKR-YKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGT 121

Query: 209 MTELQEAMPRLVDEIRFFSSYNQH---ICISNSAAEVLVKIYQLPQRNVHVILNGVDETK 265
              L    P      RF  S  +      +S S  +   +++    + + VI N VDE +
Sbjct: 122 DITLVGQDPSFQPATRF--SIEKSDGVTAVSESLRQETYELFD-ITKEIEVIPNFVDEDR 178

Query: 266 FVHDPEAGVRFPEKLGVPANVSLVMGVAG-RLVRDKGHPLLYEAFSSITRDHPGVYLLVA 324
           F   P+       +LG P    +++ ++  R V  K    +   F+ + ++ P   LLV 
Sbjct: 179 FRPKPDE--ALKRRLGAPEGEKVLIHISNFRPV--KRIDDVIRIFAKVRKEVPARLLLV- 233

Query: 325 GTGP----WGRRYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA 378
           G GP      R   ELG   +V  LG  +   + E  +  D+F+ P+ + +   L  +EA
Sbjct: 234 GDGPERSPAERLARELGLQDDVLFLGKQDH--VEELLSIADLFLLPSEK-ESFGLAALEA 290

Query: 379 MHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACK 437
           M CG  V+  N   I   VV + E G+     +V++  E    ++ D  ++ Q    A +
Sbjct: 291 MACGVPVVASNAGGIPE-VVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAAR 348

Query: 438 EHALSMFTATKMASAYERFFLRM 460
             A   F + ++   YE  + R+
Sbjct: 349 NRAAERFDSERIVPQYEALYRRL 371

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|222130 pfam13439, Glyco_transf_4, Glycosyltransferase Family 4

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 48/182 (26%), Positives = 65/182 (35%), Gaps = 32/182 (17%)

Query: 95  PGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHF----------AAND 144
            GG+ER    L  ALA RGHE+ V  AP   +P  +     L               A  
Sbjct: 11  FGGVERVVLELARALARRGHEVTVV-APELGRPLEEELGVILVSVPGLSFKRALRSPAFV 69

Query: 145 HGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGV 204
                L     FD VH+         A       +T HG W             S+ +  
Sbjct: 70  FALRRLLKKERFDLVHSHH-PAALLFAD--VPAVLTVHGTWPLRFIY-------SSLS-- 117

Query: 205 LPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDET 264
            P  + E       L  E R F   +  I +S   A+ L + Y +P+  + VI NGVD  
Sbjct: 118 -PYEVLE-------LPLERRLFRRADAVIAVSEEVADELAR-YGVPEEKIRVIPNGVDTE 168

Query: 265 KF 266
           +F
Sbjct: 169 RF 170

Length = 171

>gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 19/181 (10%)

Query: 240 AEVLVKIYQ--LPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLV 297
           ++ L K Y+  LP  ++ ++ NG     +  +P+  +R  ++L +  + ++++  AGR+ 
Sbjct: 147 SQFLKKFYEERLPNADISIVPNGFCLETYQSNPQPNLR--QQLNISPDETVLL-YAGRIS 203

Query: 298 RDKGHPLLYEAFSSITRDHPGVYLLVAG---------TGPWGRRYAELGQNVK----VLG 344
            DKG  LL +AF  +   H  + L+V G            + ++  E  + +     +LG
Sbjct: 204 PDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLG 263

Query: 345 ALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELG 404
                ++  +Y   D+ V P+   +   +  +EAM  G+ VL      I   V+     G
Sbjct: 264 GQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGIT-G 322

Query: 405 Y 405
           Y
Sbjct: 323 Y 323

Length = 380

>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family

 Score = 57.4 bits (139), Expect = 6e-09
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 20/181 (11%)

Query: 231 QHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAG-VRFPEKLGVPANVSLV 289
             +C+S + A  L   + +   +  V+ NGVD  +F    +A       +LG+      V
Sbjct: 141 AVLCVSAAWAAELRAEWGI---DATVVPNGVDAARFSPAADAADAALRRRLGLRGG-PYV 196

Query: 290 MGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAG----------TGPWGRRYAELG-- 337
           + V G   R K    L EAF+ +    P   L++AG             +  R AELG  
Sbjct: 197 LAVGGIEPR-KNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEARAAELGLD 255

Query: 338 -QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRT 396
              V + G +    L   Y   D F  P+L+ +G  L ++EA+  G  V+  +       
Sbjct: 256 PGAVVITGPVPDADLPALYRCADAFAFPSLK-EGFGLVVLEALASGIPVVASDIAPFTEY 314

Query: 397 V 397
           +
Sbjct: 315 L 315

A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score = 56.8 bits (138), Expect = 8e-09
 Identities = 94/386 (24%), Positives = 160/386 (41%), Gaps = 57/386 (14%)

Query: 102 ASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHT 161
           A+ L  ALA RGHE+H  T  S +    +    N+  H        V +N    F Y   
Sbjct: 18  ATELGKALAERGHEVHFIT--SSQPFRLEKFHPNIFFH-------EVEVNQYPLFQY-PP 67

Query: 162 ESVSLPHWRAKMVPNVAVTWHGI-----WYEVMHSK---LFGELFSNQNGVLP------G 207
             ++L    +K+   VA     +      Y + H+    L  ++   +   +P      G
Sbjct: 68  YDLALA---SKIA-EVAKE-EKLDLLHVHYAIPHAIAAYLARQMLGKEGIDIPIVTTLHG 122

Query: 208 SMTELQEAMPRLVDEIRFFSSYNQH---ICISNSAAEVLVKIYQLPQRNVHVILNGVDET 264
           +   L  A P     +RF  S  +      +S S  E   +++    + + VI N VD  
Sbjct: 123 TDITLVGADPSFKPAVRF--SIEKSDGVTAVSESLKEETYELFD-IDKPIEVIPNFVDTD 179

Query: 265 KFVHDPEAGVRFPEKLGVPANVSLVMGVAG-RLVRDKGHPLLYEAFSSITRDHPGVYLLV 323
           ++    +  ++   KLG P +  +++ ++  R V  K    + E F+ + ++ P   LLV
Sbjct: 180 RYRRKNDPALK--RKLGAPEDEKVLIHISNFRPV--KRVEDVIEVFARVQQEVPAKLLLV 235

Query: 324 AGTGP-------WGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLI 376
            G GP         R    L   V  LG  +   ++E  +  D+F+ P+   +   L  +
Sbjct: 236 -GDGPERSPAEQLVREL-GLTDRVLFLGKQDD--VAELLSISDLFLLPS-EKESFGLAAL 290

Query: 377 EAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVE-ALELVIRDGPKVLQRKGL 434
           EAM CG  V+  N   I   VV +   G+     +V++  E A+ L+  D  ++LQR   
Sbjct: 291 EAMACGVPVIASNAGGIPE-VVEHGVTGFLCDVGDVETMAEYAISLL-ED-EELLQRFSA 347

Query: 435 ACKEHALSMFTATKMASAYERFFLRM 460
           A +E A   F + K+   YE  + R+
Sbjct: 348 AARERAKERFDSEKIVPQYEALYRRL 373

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score = 56.5 bits (137), Expect = 1e-08
 Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 12/143 (8%)

Query: 254 VHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSIT 313
           + VI N VD   F            +LG+    + V+G  G     +G  LL  A   + 
Sbjct: 182 ITVIPNAVDLDLFGLPAPRDPALAAELGLEG--APVIGFIGSFYAYEGLDLLVAALPRLL 239

Query: 314 RDHPGVYLLVAGTGP----WGRRYAELGQNVKVL--GALEAHQLSEFYNALDVFVNPTLR 367
           R HP   LL+ G GP       + A LG   +V+  G +   ++  +Y+ +DV   P L 
Sbjct: 240 RRHPDARLLLVGGGPQEEALRAQAAALGLADRVVFTGRVPHDEVERYYSLIDVLAYPRLP 299

Query: 368 PQGLDLTL----IEAMHCGRTVL 386
            +  +L      +EAM  GR V 
Sbjct: 300 MRLTELVTPLKPLEAMAQGRLVA 322

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 98/407 (24%), Positives = 148/407 (36%), Gaps = 72/407 (17%)

Query: 96  GGMERHASTLYHALAARGHEIHVFT---APSDRKPHNDVHQGNLHVHFAANDHGSVNLNN 152
           GGM  +       LA RG E+ +FT    PS   P  +V  G    +  A          
Sbjct: 20  GGMNVYILETATELARRGIEVDIFTRATRPSQP-PVVEVAPGVRVRNVVA---------- 68

Query: 153 DGAFDYVHTESVSLPHWRAKMVPNVAVTW---HGIWYEVMHSK--LFGE----------- 196
            G ++ +  E   LP         V          +Y+++HS   L G+           
Sbjct: 69  -GPYEGLDKED--LPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGV 125

Query: 197 --------LFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEV--LVKI 246
                   L + +N  L    T   EA  R + E +     N    I+N+  E   LV+ 
Sbjct: 126 PLVHTAHTLAAVKNAALADGDTPEPEA--RRIGEQQLVD--NADRLIANTDEEARDLVRH 181

Query: 247 YQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY 306
           Y      + V+  G D  +F     A  R   +LG+P + + V+   GR+   K   +L 
Sbjct: 182 YDADPDRIDVVAPGADLERFRPGDRATER--ARLGLPLD-TKVVAFVGRIQPLKAPDVLL 238

Query: 307 EAFSSITRDHPGVYLLVA------GTG---PWGRRY--AELG--QNVKVLGALEAHQLSE 353
            A + +    P   L V       G+G   P       AELG    V+ L      +L  
Sbjct: 239 RAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVH 298

Query: 354 FYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVK 412
            Y A DV   P+   +   L  +EA  CG  V+      +    V + E G      +  
Sbjct: 299 VYRAADVVAVPSYN-ESFGLVAMEAQACGTPVVAARVGGL-PVAVADGETGLLVDGHDPA 356

Query: 413 SFVEALELVIRDGPKVLQRKGLACKEHALSMF----TATKMASAYER 455
            + +AL  ++ D P+   R G A  EHA + F    TA  + S+Y  
Sbjct: 357 DWADALARLLDD-PRTRIRMGAAAVEHA-AGFSWAATADGLLSSYRD 401

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 54.6 bits (132), Expect = 5e-08
 Identities = 80/412 (19%), Positives = 129/412 (31%), Gaps = 82/412 (19%)

Query: 81  KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVF------TAPSDRKPHNDVHQG 134
           ++A+ S  +P      G+    + L +AL+ARG ++ V        +         V   
Sbjct: 1   RIALVS-PYP--PRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVI 57

Query: 135 NLHVHFAANDHGSVNLNNDGAFDYVHTE-----------SVSLPHWRAKMVPNVAVTWHG 183
            L      +   +         D V  +              L   R   +P V      
Sbjct: 58  VLDN--PLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVT---- 111

Query: 184 IWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVL 243
                +H+            VL         A+ R           +  I +S   +E+L
Sbjct: 112 -----LHT------------VLLHEPRPGDRALLR-----LLLRRADAVIVMS---SELL 146

Query: 244 VKIY-QLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGH 302
             +  +     + VI +GV +                         V+   G L   KG 
Sbjct: 147 RALLLRAYPEKIAVIPHGVPDPPAEPPESLKALGGLD------GRPVLLTFGLLRPYKGL 200

Query: 303 PLLYEAFSSITRDHPGVYLLVAGT--GPWGRRYAELGQNVKVLGA----------LEAHQ 350
            LL EA   +   HP V LLVAG       R   E     + LG           L   +
Sbjct: 201 ELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEE 260

Query: 351 LSEFYNALDVFVNPTL-RPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP 409
           L E ++A DV V P     Q     L  A+  G+ V++          V++   G    P
Sbjct: 261 LPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH--AEEVLDGGTGLLVPP 318

Query: 410 -NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTAT---KMASAYERFF 457
            +  +  EA+  ++ D P++ Q    A +  A     A    ++A  Y R  
Sbjct: 319 GDPAALAEAIRRLLAD-PELAQ----ALRARAREYARAMSWERVAERYLRLL 365

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 53.8 bits (130), Expect = 9e-08
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 34/219 (15%)

Query: 255 HVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITR 314
            VI NG+D  +F     A  R       P  V L+    GR+V  K       A + + +
Sbjct: 270 RVIPNGIDPERF-----APARRARPEKEPPVVGLI----GRVVPIKDIKTFIRAAAIVRK 320

Query: 315 DHPGVYLLVAGTGPWGRRYAE----------LGQNVKVLGALEAHQ-LSEFYNALDVFVN 363
             P     V G       YAE          L  NVK  G     Q + E+   LDV V 
Sbjct: 321 KIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG----FQNVKEYLPKLDVLV- 375

Query: 364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVV---VNEEL---GYTFSP-NVKSFVE 416
            T   +G  L ++EAM  G  V+  +  S  R ++    +E L   G    P + ++   
Sbjct: 376 LTSISEGQPLVILEAMAAGIPVVATDVGS-CRELIEGADDEALGPAGEVVPPADPEALAR 434

Query: 417 ALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYER 455
           A+  +++D P++ +  G A ++     +T  +M  +Y R
Sbjct: 435 AILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL

 Score = 44.5 bits (105), Expect = 7e-05
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 21/149 (14%)

Query: 250 PQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAF 309
           P   + V   GVD T+F H P         +  P     ++ VA RL   KG  +  EA 
Sbjct: 195 PPEKIAVSRMGVDMTRFTHRP---------VKAPGTPLEIISVA-RLTEKKGLHVAIEAC 244

Query: 310 SSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALE------AHQLSEFYNALDVFVN 363
             +          + G GPW RR   L +  ++   +E      +H++    +  DVF+ 
Sbjct: 245 RQLKAQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLL 304

Query: 364 PTLRP-----QGLDLTLIEAMHCGRTVLT 387
           P++       +G+ + L+EAM  G  V++
Sbjct: 305 PSVTGTDGDMEGIPVALMEAMAVGIPVVS 333

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406

>gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 44.6 bits (105), Expect = 9e-05
 Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 7/159 (4%)

Query: 235 ISNS--AAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGV 292
            SNS  AA        + +R + V+ NG+   K V D        +     ++    +G 
Sbjct: 463 SSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGT 522

Query: 293 AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLS 352
             R+  +K   L  EA       HP V  ++ G GP      E  Q + +   +    LS
Sbjct: 523 VMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLS 582

Query: 353 E----FYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLT 387
                +    + F+  + R +GL   LIEA   G  V+T
Sbjct: 583 RRVGYWLTQFNAFLLLS-RFEGLPNVLIEAQFSGVPVVT 620

Length = 694

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 42.9 bits (102), Expect = 2e-04
 Identities = 46/171 (26%), Positives = 69/171 (40%), Gaps = 22/171 (12%)

Query: 293 AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRY-AELGQNVKVLGALEAHQL 351
            GRLV  K   L  EAF+ +     G  L+V G GP   R  A+ G NV  LG +   +L
Sbjct: 201 VGRLVPYKRIDLAIEAFNKL-----GKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEEL 255

Query: 352 SEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-N 410
            + Y     F+ P     G+    +EAM  G  V+       + T V++   G  F    
Sbjct: 256 RDLYARARAFLFPAEEDFGI--VPVEAMASGTPVIAYGKGGALET-VIDGVTGILFEEQT 312

Query: 411 VKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK 461
           V+S   A+E   ++          A + HA   F       +  RF  +++
Sbjct: 313 VESLAAAVERFEKNED----FDPQAIRAHAE-RF-------SESRFREKIR 351

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 42/181 (23%), Positives = 58/181 (32%), Gaps = 39/181 (21%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLN---- 151
           GG ER+   L  ALAARGHE+ V T             G            S+  +    
Sbjct: 1   GGAERYVLELARALAARGHEVTVVTPRGPPGRPELEEDGVRVHRLPVPRRPSLPGDLRAL 60

Query: 152 -------NDGAFDYVHTES--VSLPHWRAKM---VPNVAVTWHGIWYEVMHSKLFGELFS 199
                       D VH       L    A     VP V VT HG+               
Sbjct: 61  RRLRRLLRRERPDVVHAHGPLAGLLARLAARRRGVP-VVVTPHGLALR------------ 107

Query: 200 NQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILN 259
             +G+       L+  + R  D           + +S + AE+L  +  +P   V V+ N
Sbjct: 108 QGSGLKRRLARALERRLLRRAD---------AVVAVSEAEAELLRALG-VPAARVVVVPN 157

Query: 260 G 260
           G
Sbjct: 158 G 158

Length = 158

>gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 41.8 bits (99), Expect = 6e-04
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 376 IEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLA 435
           +EAM+ G+ V+  N    + TVV + E G+   P  + F EA+  +  D P +  R G A
Sbjct: 317 LEAMYAGKPVIACNSGGPLETVV-DGETGFLCEPTPEEFAEAMLKLAND-PDLADRMGAA 374

Query: 436 CKEHALSMFTATKMASA 452
            ++     F+    A  
Sbjct: 375 GRKRVKEKFSTEAFAER 391

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392

>gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 24/196 (12%)

Query: 278 EKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG----PWG--- 330
           EK G+      +  V+ R    K    + +A+  +    P   L++ G+G    P G   
Sbjct: 182 EKYGIDPERPYITQVS-RFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIV 240

Query: 331 ----RRYAELGQNVKVLGAL-EAHQLSEFYNAL----DVFVNPTLRPQGLDLTLIEAMHC 381
                 YAE   ++ VL     +       NAL     V +  ++R +G  LT+ EA+  
Sbjct: 241 YEEVLEYAEGDPDIHVLTLPPVSDLE---VNALQRASTVVLQKSIR-EGFGLTVTEALWK 296

Query: 382 GRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHAL 441
           G+ V+      I    + + E G+     V+     +  ++RD P++ ++ G   +EH  
Sbjct: 297 GKPVIAGPVGGI-PLQIEDGETGFLVDT-VEEAAVRILYLLRD-PELRRKMGANAREHVR 353

Query: 442 SMFTATKMASAYERFF 457
             F  T+    Y    
Sbjct: 354 ENFLITRHLKDYLYLI 369

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372

>gnl|CDD|99988 cd03818, GT1_ExpC_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 39.5 bits (93), Expect = 0.003
 Identities = 55/224 (24%), Positives = 84/224 (37%), Gaps = 26/224 (11%)

Query: 251 QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFS 310
           +  + VI +G+D  +   DP+A +R P    +     ++  VA  L   +G  +   A  
Sbjct: 176 RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALP 235

Query: 311 SITRDHPGV-YLLVAGTG-------PWGRRY-----AELG-----QNVKVLGALEAHQLS 352
            + R  P    ++V G G       P G  +      ELG       V  LG +   Q  
Sbjct: 236 RLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYL 295

Query: 353 EFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYT---FSP 409
                 DV V  T  P  L  +L+EAM CG  V+  +    VR V+ + E G     F P
Sbjct: 296 ALLQVSDVHVYLT-YPFVLSWSLLEAMACGCLVVGSDTAP-VREVITDGENGLLVDFFDP 353

Query: 410 NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY 453
              +   A+  ++ D P    R   A +  AL     +      
Sbjct: 354 --DALAAAVIELLDD-PARRARLRRAARRTALRYDLLSVCLPRQ 394

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). Length = 396

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	465
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
PLN02316	1036	synthase/transferase	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
PRK10125	405	putative glycosyl transferase; Provisional	100.0
cd03825	365	GT1_wcfI_like This family is most closely related	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
cd03802	335	GT1_AviGT4_like This family is most closely relate	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
cd03823	359	GT1_ExpE7_like This family is most closely related	100.0
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
PLN00142	815	sucrose synthase	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
cd03811	353	GT1_WabH_like This family is most closely related	100.0
cd04946	407	GT1_AmsK_like This family is most closely related	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	100.0
PHA01630	331	putative group 1 glycosyl transferase	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
PHA01633	335	putative glycosyl transferase group 1	100.0
PLN02275	371	transferase, transferring glycosyl groups	100.0
PLN02501	794	digalactosyldiacylglycerol synthase	100.0
cd04949	372	GT1_gtfA_like This family is most closely related	99.97
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.97
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.96
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.96
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.95
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.95
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.95
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.95
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.95
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.95
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.95
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.95
PLN02605	382	monogalactosyldiacylglycerol synthase	99.94
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.94
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.94
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.93
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.92
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.91
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.91
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.9
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.9
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.88
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.87
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.86
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.84
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.83
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.8
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.79
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.76
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.7
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.66
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.63
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.58
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.57
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.55
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.54
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.51
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.51
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.49
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.41
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.4
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.4
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.39
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.36
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.36
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.35
TIGR03492	396	conserved hypothetical protein. This protein famil	99.34
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	99.3
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	99.29
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.2
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	99.17
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	99.16
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	99.16
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.15
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	99.11
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	99.06
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	99.0
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	98.94
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	98.92
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	98.91
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	98.9
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	98.69
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.64
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	98.64
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.59
PRK10017	426	colanic acid biosynthesis protein; Provisional	98.59
COG4671	400	Predicted glycosyl transferase [General function p	98.55
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.53
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	98.48
PLN02448	459	UDP-glycosyltransferase family protein	98.48
COG1817	346	Uncharacterized protein conserved in archaea [Func	98.47
PLN02208	442	glycosyltransferase family protein	98.41
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	98.35
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.35
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	98.33
PLN03007	482	UDP-glucosyltransferase family protein	98.29
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	98.26
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.16
PLN02210	456	UDP-glucosyl transferase	98.1
PLN00414	446	glycosyltransferase family protein	97.95
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	97.94
PF11997	268	DUF3492: Domain of unknown function (DUF3492); Int	97.94
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.75
PLN02173	449	UDP-glucosyl transferase family protein	97.6
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	97.51
PLN02207	468	UDP-glycosyltransferase	97.47
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	97.46
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.44
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.38
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	97.3
PLN02670	472	transferase, transferring glycosyl groups	97.2
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	97.19
PLN02554	481	UDP-glycosyltransferase family protein	97.18
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	97.12
PLN02764	453	glycosyltransferase family protein	97.11
PLN02555	480	limonoid glucosyltransferase	97.11
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	97.1
PLN02562	448	UDP-glycosyltransferase	97.1
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	97.07
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	97.05
PLN02152	455	indole-3-acetate beta-glucosyltransferase	96.97
PLN00164	480	glucosyltransferase; Provisional	96.96
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	96.96
PLN03004	451	UDP-glycosyltransferase	96.93
PLN02167	475	UDP-glycosyltransferase family protein	96.89
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	96.87
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	96.73
KOG1050	732	consensus Trehalose-6-phosphate synthase component	96.72
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	96.7
PF10933	364	DUF2827: Protein of unknown function (DUF2827); In	96.6
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	95.91
PRK14986	815	glycogen phosphorylase; Provisional	95.9
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	95.87
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	95.84
PLN02992	481	coniferyl-alcohol glucosyltransferase	95.74
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	95.74
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	95.64
PLN03015	470	UDP-glucosyl transferase	95.61
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.58
PF12038	168	DUF3524: Domain of unknown function (DUF3524); Int	95.57
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	95.41
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	95.23
PLN02534	491	UDP-glycosyltransferase	95.13
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	94.97
PF01975	196	SurE: Survival protein SurE; InterPro: IPR002828 T	94.91
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	94.62
PRK14985	798	maltodextrin phosphorylase; Provisional	94.4
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	94.35
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	93.42
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	93.3
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	92.55
PF10093	374	DUF2331: Uncharacterized protein conserved in bact	92.45
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	92.25
COG4394	370	Uncharacterized protein conserved in bacteria [Fun	91.93
PLN02166	436	dTDP-glucose 4,6-dehydratase	91.57
PF00862	550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	91.19
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	91.03
PLN02206	442	UDP-glucuronate decarboxylase	90.08
PRK13932	257	stationary phase survival protein SurE; Provisiona	88.94
COG0496	252	SurE Predicted acid phosphatase [General function	88.54
TIGR03837	371	efp_adjacent_2 conserved hypothetical protein, PP_	88.47
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	87.0
TIGR00087	244	surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco	84.02
PF02951	119	GSH-S_N: Prokaryotic glutathione synthetase, N-ter	83.7
PF03033	139	Glyco_transf_28: Glycosyltransferase family 28 N-t	82.93
PRK00346	250	surE 5'(3')-nucleotidase/polyphosphatase; Provisio	82.75
PF03358	152	FMN_red: NADPH-dependent FMN reductase; InterPro:	82.7
KOG3349	170	consensus Predicted glycosyltransferase [General f	80.39

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=2.6e-44  Score=357.43  Aligned_cols=354  Identities=19%  Similarity=0.247  Sum_probs=268.9

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEE--ee--cC---C----
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHF--AA--ND---H----  145 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~--~~--~~---~----  145 (465)
                      .++|||++++...|+ +..||++.++.+++++|.++||+|++++.........   .+...+..  ..  ..   .    
T Consensus        56 ~~~mrI~~~~~~~~~-~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~~---~g~~v~~~~~~~~~~~~~~~~~~~  131 (465)
T PLN02871         56 SRPRRIALFVEPSPF-SYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQEF---HGAKVIGSWSFPCPFYQKVPLSLA  131 (465)
T ss_pred             CCCceEEEEECCcCC-cccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCccc---cCceeeccCCcCCccCCCceeecc
Confidence            668999999875544 5779999999999999999999999999865432111   01000000  00  00   0    


Q ss_pred             ---CccccCCCCCCcEEEecCCchhHH------hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhh
Q 044542          146 ---GSVNLNNDGAFDYVHTESVSLPHW------RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAM  216 (465)
Q Consensus       146 ---~~~~~~~~~~~DiI~~~~~~~~~~------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (465)
                         ......++.+||+||+|+.....+      ...++| +++++|+.........              .+ ..+.+.+
T Consensus       132 ~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip-~V~~~h~~~~~~~~~~--------------~~-~~~~~~~  195 (465)
T PLN02871        132 LSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVP-LVMSYHTHVPVYIPRY--------------TF-SWLVKPM  195 (465)
T ss_pred             CCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCC-EEEEEecCchhhhhcc--------------cc-hhhHHHH
Confidence               001112678999999997642221      223567 8999997543211100              00 0111111


Q ss_pred             HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc
Q 044542          217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL  296 (465)
Q Consensus       217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl  296 (465)
                      ...  ++.+++.+|.++++|+..++.+.+.+..+.+++.++|||+|.+.|.+.... ...+.++....++..+|+|+||+
T Consensus       196 ~~~--~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~-~~~~~~~~~~~~~~~~i~~vGrl  272 (465)
T PLN02871        196 WDI--IRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRS-EEMRARLSGGEPEKPLIVYVGRL  272 (465)
T ss_pred             HHH--HHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCcccc-HHHHHHhcCCCCCCeEEEEeCCC
Confidence            111  235678899999999999999988544567899999999999888664321 23444443222233678899999


Q ss_pred             ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHH
Q 044542          297 VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLT  374 (465)
Q Consensus       297 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~  374 (465)
                      .+.||++.++++++++    ++++|+|+|+|++.+.++++.  .+|.|+|+++++++.++|+.||++|+||.. |++|++
T Consensus       273 ~~~K~~~~li~a~~~~----~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~-E~~g~~  347 (465)
T PLN02871        273 GAEKNLDFLKRVMERL----PGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSES-ETLGFV  347 (465)
T ss_pred             chhhhHHHHHHHHHhC----CCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcc-cccCcH
Confidence            9999999999999876    689999999999888887765  689999999999999999999999999975 999999


Q ss_pred             HHHHHHcCCeEEecCCCCcceeeeee---CCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542          375 LIEAMHCGRTVLTPNYPSIVRTVVVN---EELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA  450 (465)
Q Consensus       375 ~~EAma~G~PvI~s~~gg~~~e~v~~---~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  450 (465)
                      ++|||+||+|||+++.+|.. |++.+   +++|+++++ |+++++++|.+++++ ++.+++|+++++++++ +|+|+.++
T Consensus       348 vlEAmA~G~PVI~s~~gg~~-eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~-~fsw~~~a  424 (465)
T PLN02871        348 VLEAMASGVPVVAARAGGIP-DIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMGAAAREEVE-KWDWRAAT  424 (465)
T ss_pred             HHHHHHcCCCEEEcCCCCcH-hhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH-hCCHHHHH
Confidence            99999999999999999998 88888   899999998 999999999999998 8999999999999986 59999999


Q ss_pred             HHHHH-HHHHhc
Q 044542          451 SAYER-FFLRMK  461 (465)
Q Consensus       451 ~~~~~-~~~~~~  461 (465)
                      +++++ .|++++
T Consensus       425 ~~l~~~~Y~~~~  436 (465)
T PLN02871        425 RKLRNEQYSAAI  436 (465)
T ss_pred             HHHHHHHHHHHH
Confidence            99998 798765

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=3e-44  Score=352.84  Aligned_cols=361  Identities=18%  Similarity=0.222  Sum_probs=272.4

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-----------CcccCCcceEEEeecC----
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH-----------NDVHQGNLHVHFAAND----  144 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------~~~~~~~~~v~~~~~~----  144 (465)
                      |||++++..|+  |..||.+.++.+++++|.+.||+|+|+|+.+.....           ......+..+...+..    
T Consensus         1 mkIlii~~~~~--P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~   78 (412)
T PRK10307          1 MKILVYGINYA--PELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQ   78 (412)
T ss_pred             CeEEEEecCCC--CCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCC
Confidence            79999998775  367999999999999999999999999976421110           0011123333332211    


Q ss_pred             CCcc----c-----------cC--CCCCCcEEEecCCchh-----HHhh--hcCCcEEEEecchhHHHHhhhhhhhhhhc
Q 044542          145 HGSV----N-----------LN--NDGAFDYVHTESVSLP-----HWRA--KMVPNVAVTWHGIWYEVMHSKLFGELFSN  200 (465)
Q Consensus       145 ~~~~----~-----------~~--~~~~~DiI~~~~~~~~-----~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~  200 (465)
                      ...+    .           ..  ...+||+||+|.+...     .+++  .+.| +++++|+.+........   .   
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~-~v~~~~d~~~~~~~~~~---~---  151 (412)
T PRK10307         79 PSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGAR-TWLHIQDYEVDAAFGLG---L---  151 (412)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCC-EEEEeccCCHHHHHHhC---C---
Confidence            0000    0           00  1368999999875321     1222  2456 88889987653321110   0   


Q ss_pred             CCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCccc-Ccccccc
Q 044542          201 QNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA-GVRFPEK  279 (465)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~-~~~~r~~  279 (465)
                         ....   .+......  .+...++++|.++++|+..++.+.+ ++++..++.+||||+|.+.|.+.... ...++++
T Consensus       152 ---~~~~---~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~-~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~  222 (412)
T PRK10307        152 ---LKGG---KVARLATA--FERSLLRRFDNVSTISRSMMNKARE-KGVAAEKVIFFPNWSEVARFQPVADADVDALRAQ  222 (412)
T ss_pred             ---ccCc---HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHH-cCCCcccEEEECCCcCHhhcCCCCccchHHHHHH
Confidence               0000   11111111  1336688999999999999999987 57788899999999999887654321 2357778


Q ss_pred             cCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c-CCeEEcCCCChhHHHHH
Q 044542          280 LGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G-QNVKVLGALEAHQLSEF  354 (465)
Q Consensus       280 ~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~-~~V~~~g~v~~~~~~~~  354 (465)
                      ++++++. ++++|+|++.+.||++.+++|++.+.+ .++++|+|+|+|+..+.++++    + ++|.|+|+++++++.++
T Consensus       223 ~~~~~~~-~~i~~~G~l~~~kg~~~li~a~~~l~~-~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~  300 (412)
T PRK10307        223 LGLPDGK-KIVLYSGNIGEKQGLELVIDAARRLRD-RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPAL  300 (412)
T ss_pred             cCCCCCC-EEEEEcCccccccCHHHHHHHHHHhcc-CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHH
Confidence            8887665 788899999999999999999998854 478999999999887766543    2 68999999999999999


Q ss_pred             HHhcCeEEecccCCCC----CcHHHHHHHHcCCeEEecCCCCcc-eeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHH
Q 044542          355 YNALDVFVNPTLRPQG----LDLTLIEAMHCGRTVLTPNYPSIV-RTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKV  428 (465)
Q Consensus       355 ~~~aDv~v~ps~~~eg----~~~~~~EAma~G~PvI~s~~gg~~-~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~  428 (465)
                      |++||++++||.. |+    +|.+++|||+||+|||+|+.+|.. .+++.  ++|+++++ |+++++++|.+++++ ++.
T Consensus       301 ~~~aDi~v~ps~~-e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~-~~~  376 (412)
T PRK10307        301 LKMADCHLLPQKA-GAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQ-ALL  376 (412)
T ss_pred             HHhcCEeEEeecc-CcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhC-HHH
Confidence            9999999999975 77    688999999999999999987631 25555  58999998 999999999999998 899


Q ss_pred             HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCCC
Q 044542          429 LQRKGLACKEHALSMFTATKMASAYERFFLRMKNPY  464 (465)
Q Consensus       429 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~  464 (465)
                      +++|+++++++++++|||+.++++|.++|++++.++
T Consensus       377 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~  412 (412)
T PRK10307        377 RPKLGTVAREYAERTLDKENVLRQFIADIRGLVAER  412 (412)
T ss_pred             HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999988763

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.9e-44  Score=348.32  Aligned_cols=344  Identities=22%  Similarity=0.292  Sum_probs=261.2

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCC-----cc-------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHG-----SV-------  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~-------  148 (465)
                      ||+++++.|+  |..||.++++..++++|.++||+|+|++.........+....+..+...+....     ..       
T Consensus         1 kI~~v~~~~~--p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~   78 (398)
T cd03796           1 RICMVSDFFY--PNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFP   78 (398)
T ss_pred             CeeEEeeccc--cccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHH
Confidence            7999999775  478999999999999999999999999976433221111122223333222110     00       


Q ss_pred             ---ccCCCCCCcEEEecCCchh----HHh---hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHH
Q 044542          149 ---NLNNDGAFDYVHTESVSLP----HWR---AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPR  218 (465)
Q Consensus       149 ---~~~~~~~~DiI~~~~~~~~----~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (465)
                         ....+.+||+||+|+....    .++   ..++| ++++.|+.....   +..               ......   
T Consensus        79 ~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~-~v~t~h~~~~~~---~~~---------------~~~~~~---  136 (398)
T cd03796          79 LLRNILIRERITIVHGHQAFSALAHEALLHARTMGLK-TVFTDHSLFGFA---DAS---------------SIHTNK---  136 (398)
T ss_pred             HHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCc-EEEEeccccccc---chh---------------hHHhhH---
Confidence               0115679999999975311    111   23457 899999853210   000               001111   


Q ss_pred             HHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecccc
Q 044542          219 LVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVR  298 (465)
Q Consensus       219 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~  298 (465)
                      .  ....++++|.++++|+...+.+....+++.+++.+||||+|.+.|.+....         .+ ++.++++++||+.+
T Consensus       137 ~--~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~---------~~-~~~~~i~~~grl~~  204 (398)
T cd03796         137 L--LRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK---------RD-NDKITIVVISRLVY  204 (398)
T ss_pred             H--HHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc---------CC-CCceEEEEEeccch
Confidence            1  124568999999999999987665567788999999999998877654321         12 23488889999999


Q ss_pred             ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          299 DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       299 ~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      .||++.+++|++.+.++.++++|+++|+|+..+.++++    +  ++|.|+|+++.+++..+|+.||++++||.. |++|
T Consensus       205 ~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~-E~~g  283 (398)
T cd03796         205 RKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLT-EAFC  283 (398)
T ss_pred             hcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChh-hccC
Confidence            99999999999999888899999999999876655543    2  779999999999999999999999999975 9999


Q ss_pred             HHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      ++++|||+||+|||+++.||.+ |++.++ .++++++|+++++++|.+++++ ......+++++++.++++|||+.++++
T Consensus       284 ~~~~EAma~G~PVI~s~~gg~~-e~i~~~-~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~  360 (398)
T cd03796         284 IAIVEAASCGLLVVSTRVGGIP-EVLPPD-MILLAEPDVESIVRKLEEAISI-LRTGKHDPWSFHNRVKKMYSWEDVAKR  360 (398)
T ss_pred             HHHHHHHHcCCCEEECCCCCch-hheeCC-ceeecCCCHHHHHHHHHHHHhC-hhhhhhHHHHHHHHHHhhCCHHHHHHH
Confidence            9999999999999999999998 787765 4555555999999999999998 555557788999999999999999999


Q ss_pred             HHHHHHHhcCCC
Q 044542          453 YERFFLRMKNPY  464 (465)
Q Consensus       453 ~~~~~~~~~~~~  464 (465)
                      +.++|++++..+
T Consensus       361 ~~~~y~~l~~~~  372 (398)
T cd03796         361 TEKVYDRILQTP  372 (398)
T ss_pred             HHHHHHHHhcCC
Confidence            999999987653

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=5.3e-44  Score=354.45  Aligned_cols=369  Identities=20%  Similarity=0.278  Sum_probs=262.0

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC--c------c----------cCCcceEEEe
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN--D------V----------HQGNLHVHFA  141 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~------~----------~~~~~~v~~~  141 (465)
                      |||++++.++.+....||.+.++..|+++|++.||+|+|+++........  .      .          ...+..+.+.
T Consensus         1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v   80 (466)
T PRK00654          1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI   80 (466)
T ss_pred             CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence            79999999864446799999999999999999999999999875432211  0      0          1123334433


Q ss_pred             ecC-----CCccccC-------------------CCCCCcEEEecCCc--h-hHHhh-------hcCCcEEEEecchhHH
Q 044542          142 AND-----HGSVNLN-------------------NDGAFDYVHTESVS--L-PHWRA-------KMVPNVAVTWHGIWYE  187 (465)
Q Consensus       142 ~~~-----~~~~~~~-------------------~~~~~DiI~~~~~~--~-~~~~~-------~~~p~~v~~~h~~~~~  187 (465)
                      ...     .....+.                   ...+|||||+|.+.  + +.+++       .++| ++.++|+..+.
T Consensus        81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~-~v~TiH~~~~~  159 (466)
T PRK00654         81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIK-TVFTIHNLAYQ  159 (466)
T ss_pred             eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCC-EEEEcCCCcCC
Confidence            211     1111100                   23589999999863  2 22222       1457 99999997532


Q ss_pred             HHh-hhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH---------hCCCCCCEEEe
Q 044542          188 VMH-SKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI---------YQLPQRNVHVI  257 (465)
Q Consensus       188 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---------~~~~~~ki~vi  257 (465)
                      ... .+..... ..  +........+. ........+..++.+|.++++|+..++.+.+.         ++.+..|+.+|
T Consensus       160 g~~~~~~~~~~-~~--~~~~~~~~~~~-~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI  235 (466)
T PRK00654        160 GLFPAEILGEL-GL--PAEAFHLEGLE-FYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGI  235 (466)
T ss_pred             CcCCHHHHHHc-CC--ChHHcCchhhh-cCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEe
Confidence            100 0000000 00  00000000000 00001111245789999999999999888652         23456899999


Q ss_pred             cCCCCCCCccCCccc-----------------CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeE
Q 044542          258 LNGVDETKFVHDPEA-----------------GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVY  320 (465)
Q Consensus       258 ~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~  320 (465)
                      +||+|.+.|.+....                 +..+++++|+++++.++++++||+.++||++.+++|++++.++  +++
T Consensus       236 ~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~  313 (466)
T PRK00654        236 LNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQ  313 (466)
T ss_pred             cCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--CCE
Confidence            999999988774321                 2357888999864457888999999999999999999999764  789


Q ss_pred             EEEEeCCcc--hhHHHHh----cCCeEE-cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCc
Q 044542          321 LLVAGTGPW--GRRYAEL----GQNVKV-LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI  393 (465)
Q Consensus       321 l~ivG~g~~--~~~~~~l----~~~V~~-~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~  393 (465)
                      |+|+|+|+.  .+.++++    +.++.+ .|+ +.+.+..+|++||++++||.+ |+||++++|||+||+|+|++++||+
T Consensus       314 lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~-E~~gl~~lEAma~G~p~V~~~~gG~  391 (466)
T PRK00654        314 LVLLGTGDPELEEAFRALAARYPGKVGVQIGY-DEALAHRIYAGADMFLMPSRF-EPCGLTQLYALRYGTLPIVRRTGGL  391 (466)
T ss_pred             EEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHHhhCCEEEeCCCC-CCchHHHHHHHHCCCCEEEeCCCCc
Confidence            999998853  3444443    356665 555 556678999999999999986 9999999999999999999999999


Q ss_pred             ceeeeeeC------CceEEeCC-CHHHHHHHHHHHHh---CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542          394 VRTVVVNE------ELGYTFSP-NVKSFVEALELVIR---DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       394 ~~e~v~~~------~~G~l~~~-d~~~la~~i~~ll~---~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      . |++.++      .+|+++++ |+++|+++|.++++   + ++.+.++++++.   +++|||+.++++|.++|+++++
T Consensus       392 ~-e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~-~~~~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~~~  465 (466)
T PRK00654        392 A-DTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQ-PPLWRALQRQAM---AQDFSWDKSAEEYLELYRRLLG  465 (466)
T ss_pred             c-ceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHh---ccCCChHHHHHHHHHHHHHHhh
Confidence            8 888887      89999999 99999999999886   5 566777877764   3679999999999999998864

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=1.9e-43  Score=343.77  Aligned_cols=339  Identities=18%  Similarity=0.248  Sum_probs=262.7

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc--cc--CCcceEEEeecCC----------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND--VH--QGNLHVHFAANDH----------  145 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~--~~~~~v~~~~~~~----------  145 (465)
                      |||+++...||     .-.++++.+-+.+|.++||+|++++..........  ..  .....+++.+...          
T Consensus         1 m~ia~~~~~~P-----~~setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (406)
T PRK15427          1 MKVGFFLLKFP-----LSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHR   75 (406)
T ss_pred             CeEEEEeccCC-----ccchhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhh
Confidence            79999999997     33489999999999999999999997765432110  01  1111222221000          


Q ss_pred             -----------------Ccccc----------------CCCCCCcEEEecCCchh---HHhhh----cCCcEEEEecchh
Q 044542          146 -----------------GSVNL----------------NNDGAFDYVHTESVSLP---HWRAK----MVPNVAVTWHGIW  185 (465)
Q Consensus       146 -----------------~~~~~----------------~~~~~~DiI~~~~~~~~---~~~~~----~~p~~v~~~h~~~  185 (465)
                                       .....                .++.+||+||+|.....   ..++.    ..+ .+.++|+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~-~~~t~Hg~d  154 (406)
T PRK15427         76 ASQTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGK-IATIFHGID  154 (406)
T ss_pred             hhhHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCC-eEEEEcccc
Confidence                             00000                04678999999975322   22221    124 788999853


Q ss_pred             HHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCC
Q 044542          186 YEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETK  265 (465)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~  265 (465)
                      ....  ..               ......    .  ....++++|.++++|+..++.+.+ +|++.+++.++|||+|.+.
T Consensus       155 ~~~~--~~---------------~~~~~~----~--~~~~~~~ad~vv~~S~~~~~~l~~-~g~~~~ki~vi~nGvd~~~  210 (406)
T PRK15427        155 ISSR--EV---------------LNHYTP----E--YQQLFRRGDLMLPISDLWAGRLQK-MGCPPEKIAVSRMGVDMTR  210 (406)
T ss_pred             cccc--hh---------------hhhhhH----H--HHHHHHhCCEEEECCHHHHHHHHH-cCCCHHHEEEcCCCCCHHH
Confidence            2100  00               000000    1  124568999999999999999987 6888899999999999988


Q ss_pred             ccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CC
Q 044542          266 FVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QN  339 (465)
Q Consensus       266 ~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~  339 (465)
                      |.+....          ..++++.++++||+.+.||++.+++|++.+.+++++++++|+|+|+..+.++++    +  ++
T Consensus       211 f~~~~~~----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~  280 (406)
T PRK15427        211 FSPRPVK----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDV  280 (406)
T ss_pred             cCCCccc----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCe
Confidence            7653221          112347888999999999999999999999988889999999999887666543    3  78


Q ss_pred             eEEcCCCChhHHHHHHHhcCeEEecccC-----CCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHH
Q 044542          340 VKVLGALEAHQLSEFYNALDVFVNPTLR-----PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKS  413 (465)
Q Consensus       340 V~~~g~v~~~~~~~~~~~aDv~v~ps~~-----~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~  413 (465)
                      |.|+|+++++++.++|+.||++++||..     .||+|++++|||+||+|||+|+.+|++ |++.++.+|+++++ |+++
T Consensus       281 V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~-E~v~~~~~G~lv~~~d~~~  359 (406)
T PRK15427        281 VEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIP-ELVEADKSGWLVPENDAQA  359 (406)
T ss_pred             EEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCch-hhhcCCCceEEeCCCCHHH
Confidence            9999999999999999999999999963     299999999999999999999999998 89999999999999 9999


Q ss_pred             HHHHHHHHHh-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          414 FVEALELVIR-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       414 la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      ++++|.++++ + ++.+++|+++++++++++|+|+.+++++.++|+++
T Consensus       360 la~ai~~l~~~d-~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~  406 (406)
T PRK15427        360 LAQRLAAFSQLD-TDELAPVVKRAREKVETDFNQQVINRELASLLQAL  406 (406)
T ss_pred             HHHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence            9999999999 7 89999999999999999999999999999999763

>PLN02316 synthase/transferase

Probab=100.00  E-value=4.9e-43  Score=359.84  Aligned_cols=349  Identities=16%  Similarity=0.204  Sum_probs=265.0

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC---cc------------------cCCc
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN---DV------------------HQGN  135 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~~------------------~~~~  135 (465)
                      ..+|||++|+.++++-...||...++..|.++|++.||+|+|+++........   ..                  ...+
T Consensus       585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G  664 (1036)
T PLN02316        585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEG  664 (1036)
T ss_pred             CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECC
Confidence            45699999998876556799999999999999999999999999986532110   00                  0112


Q ss_pred             ceEEEeecCCCc------cccC-------------------CCCCCcEEEecCCc--hhHHh-h--------hcCCcEEE
Q 044542          136 LHVHFAANDHGS------VNLN-------------------NDGAFDYVHTESVS--LPHWR-A--------KMVPNVAV  179 (465)
Q Consensus       136 ~~v~~~~~~~~~------~~~~-------------------~~~~~DiI~~~~~~--~~~~~-~--------~~~p~~v~  179 (465)
                      ..+.++......      +.+.                   ...+|||||+|.+.  +..++ .        .++| +|.
T Consensus       665 V~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p-~V~  743 (1036)
T PLN02316        665 LSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKAR-VVF  743 (1036)
T ss_pred             cEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCC-EEE
Confidence            223333221111      1000                   34689999999862  22222 1        1246 999


Q ss_pred             EecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCC--CCCEEEe
Q 044542          180 TWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLP--QRNVHVI  257 (465)
Q Consensus       180 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~--~~ki~vi  257 (465)
                      ++|+..+..                      .   .+.      ..+..+|.|+++|+.+++.+...+.+.  ..|+.+|
T Consensus       744 TiHnl~~~~----------------------n---~lk------~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI  792 (1036)
T PLN02316        744 TIHNLEFGA----------------------N---HIG------KAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGI  792 (1036)
T ss_pred             EeCCcccch----------------------h---HHH------HHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEE
Confidence            999853110                      0   011      345789999999999999988754443  4799999


Q ss_pred             cCCCCCCCccCCcc------------------cCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCe
Q 044542          258 LNGVDETKFVHDPE------------------AGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGV  319 (465)
Q Consensus       258 ~ngvd~~~~~~~~~------------------~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~  319 (465)
                      +||||.+.|.|..+                  .+..+++++|++..+..+++++||+.++||++.+++|+..+.+  .++
T Consensus       793 ~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~  870 (1036)
T PLN02316        793 LNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNG  870 (1036)
T ss_pred             ECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh--cCc
Confidence            99999988866421                  1234788899985344788899999999999999999999875  478


Q ss_pred             EEEEEeCCcch---hHHHH----h----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          320 YLLVAGTGPWG---RRYAE----L----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       320 ~l~ivG~g~~~---~~~~~----l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      +|+|+|+|+..   +.+++    +    .++|.|.|..+......+|+.||++|+||.+ |+||++++|||+||+|+|++
T Consensus       871 qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~-EP~GLvqLEAMa~GtppVvs  949 (1036)
T PLN02316        871 QVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIF-EPCGLTQLTAMRYGSIPVVR  949 (1036)
T ss_pred             EEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcc-cCccHHHHHHHHcCCCeEEE
Confidence            99999998653   23332    2    2579998887644456899999999999986 99999999999999999999


Q ss_pred             CCCCcceeeeeeC-------------CceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          389 NYPSIVRTVVVNE-------------ELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       389 ~~gg~~~e~v~~~-------------~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                      ++||++ ++|.++             .+|+++++ |+++|+.+|.+++.+.++....+++.+++.+.++|||+.++++|+
T Consensus       950 ~vGGL~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~ 1028 (1036)
T PLN02316        950 KTGGLF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYM 1028 (1036)
T ss_pred             cCCCcH-hhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            999999 787763             68999999 999999999999987456667788899999999999999999999


Q ss_pred             HHHHHhc
Q 044542          455 RFFLRMK  461 (465)
Q Consensus       455 ~~~~~~~  461 (465)
                      ++|+++.
T Consensus      1029 ~LY~~a~ 1035 (1036)
T PLN02316       1029 ELYHSAR 1035 (1036)
T ss_pred             HHHHHHh
Confidence            9999875

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=2.1e-43  Score=342.91  Aligned_cols=350  Identities=22%  Similarity=0.286  Sum_probs=263.1

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCC-cc-------ccC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHG-SV-------NLN  151 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~-------~~~  151 (465)
                      .||+++...+    ..||+++++..++++|.+.|+++++++....+....+....+..+........ .+       +..
T Consensus         2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~l   77 (374)
T TIGR03088         2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLL   77 (374)
T ss_pred             ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCCCCCChHHHHHHHHHH
Confidence            4899999885    67999999999999999999999898865433222222233333333322211 11       112


Q ss_pred             CCCCCcEEEecCCchh--HHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhc
Q 044542          152 NDGAFDYVHTESVSLP--HWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFS  227 (465)
Q Consensus       152 ~~~~~DiI~~~~~~~~--~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (465)
                      ++.+||+||+|+....  .+.  ..+.|..+.+.|+......+.                 ..+.+.++.+     ...+
T Consensus        78 ~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-----------------~~~~~~~~~~-----~~~~  135 (374)
T TIGR03088        78 RQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDG-----------------SNWKYRWLRR-----LYRP  135 (374)
T ss_pred             HHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccchh-----------------hHHHHHHHHH-----HHHh
Confidence            6789999999975321  111  123453345555432110000                 0011122222     2345


Q ss_pred             ccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHH
Q 044542          228 SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYE  307 (465)
Q Consensus       228 ~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~  307 (465)
                      .+|.++++|+..++.+.+.++++..++.+||||+|.+.|.+........+++...+++ +++++++||+.++||++.+++
T Consensus       136 ~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~vGrl~~~Kg~~~li~  214 (374)
T TIGR03088       136 LIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADE-SVVVGTVGRLQAVKDQPTLVR  214 (374)
T ss_pred             cCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCC-CeEEEEEecCCcccCHHHHHH
Confidence            6899999999999999988888889999999999998876654322222223333333 488889999999999999999


Q ss_pred             HHHHhhhcCC----CeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHH
Q 044542          308 AFSSITRDHP----GVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIE  377 (465)
Q Consensus       308 a~~~l~~~~~----~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~E  377 (465)
                      |+..+.++.+    +++|+++|+|+..+.++++    +  ++|.|.|+.  +++.++|++||++++||.. ||+|++++|
T Consensus       215 a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~pS~~-Eg~~~~~lE  291 (374)
T TIGR03088       215 AFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGER--DDVPALMQALDLFVLPSLA-EGISNTILE  291 (374)
T ss_pred             HHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCc--CCHHHHHHhcCEEEecccc-ccCchHHHH
Confidence            9999877654    7899999999876655543    2  678999975  7999999999999999975 999999999


Q ss_pred             HHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 044542          378 AMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERF  456 (465)
Q Consensus       378 Ama~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~  456 (465)
                      ||+||+|||+|+.||.+ |++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++++.++|||+.++++|.++
T Consensus       292 Ama~G~Pvv~s~~~g~~-e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~  369 (374)
T TIGR03088       292 AMASGLPVIATAVGGNP-ELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGL  369 (374)
T ss_pred             HHHcCCCEEEcCCCCcH-HHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999998 89999999999998 999999999999998 8889999999999999999999999999999


Q ss_pred             HHHhc
Q 044542          457 FLRMK  461 (465)
Q Consensus       457 ~~~~~  461 (465)
                      |++++
T Consensus       370 y~~~~  374 (374)
T TIGR03088       370 YDQLL  374 (374)
T ss_pred             HHHhC
Confidence            98763

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=8.1e-43  Score=342.41  Aligned_cols=344  Identities=22%  Similarity=0.321  Sum_probs=261.2

Q ss_pred             CChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC--cccCCcceEEEeecCC-C-c----------------c-ccC--
Q 044542           95 PGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN--DVHQGNLHVHFAANDH-G-S----------------V-NLN--  151 (465)
Q Consensus        95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~~~~~~~v~~~~~~~-~-~----------------~-~~~--  151 (465)
                      .||+++++.+|+++|.++||+|+|+|.........  +.. .+..+....... . .                + ...  
T Consensus        19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (405)
T TIGR03449        19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVA-PGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARH   97 (405)
T ss_pred             CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccC-CCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhc
Confidence            59999999999999999999999999764322211  112 233333221110 0 0                0 001  


Q ss_pred             CCCCCcEEEecCCc--hhHHh---hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhh
Q 044542          152 NDGAFDYVHTESVS--LPHWR---AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF  226 (465)
Q Consensus       152 ~~~~~DiI~~~~~~--~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (465)
                      ...+||+||+|.+.  ...++   ..++| ++.++|+.....  ......    ..    ......     ....+...+
T Consensus        98 ~~~~~Diih~h~~~~~~~~~~~~~~~~~p-~v~t~h~~~~~~--~~~~~~----~~----~~~~~~-----~~~~e~~~~  161 (405)
T TIGR03449        98 EPGYYDLIHSHYWLSGQVGWLLRDRWGVP-LVHTAHTLAAVK--NAALAD----GD----TPEPEA-----RRIGEQQLV  161 (405)
T ss_pred             cCCCCCeEEechHHHHHHHHHHHHhcCCC-EEEeccchHHHH--HHhccC----CC----CCchHH-----HHHHHHHHH
Confidence            23579999999742  12222   23567 999999875321  100000    00    000011     111233567


Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY  306 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll  306 (465)
                      +++|.++++|+...+.+.+.++.+.+++.+||||+|.+.|.+.+  ....++++++++++ .+++++|++.+.||++.++
T Consensus       162 ~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~--~~~~~~~~~~~~~~-~~i~~~G~l~~~K~~~~li  238 (405)
T TIGR03449       162 DNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGD--RATERARLGLPLDT-KVVAFVGRIQPLKAPDVLL  238 (405)
T ss_pred             HhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCc--HHHHHHhcCCCCCC-cEEEEecCCCcccCHHHHH
Confidence            89999999999999988887888889999999999998876542  34567778887665 6777999999999999999


Q ss_pred             HHHHHhhhcCCC--eEEEEEeCC-----cchhHHHH----hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcH
Q 044542          307 EAFSSITRDHPG--VYLLVAGTG-----PWGRRYAE----LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDL  373 (465)
Q Consensus       307 ~a~~~l~~~~~~--~~l~ivG~g-----~~~~~~~~----l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~  373 (465)
                      +|++.+.+++++  ++|+++|.+     +..+.+++    ++  ++|.|+|+++.+++.++|+.||++++||.. |++|+
T Consensus       239 ~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~-E~~g~  317 (405)
T TIGR03449       239 RAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYN-ESFGL  317 (405)
T ss_pred             HHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCC-CCcCh
Confidence            999999887776  999999952     23333433    23  689999999999999999999999999975 99999


Q ss_pred             HHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          374 TLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       374 ~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      +++|||++|+|||+++.|+.+ +++.++.+|+++++ |+++++++|.+++++ ++.++++++++++.++ +|||+.++++
T Consensus       318 ~~lEAma~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~~~~~~~~-~fsw~~~~~~  394 (405)
T TIGR03449       318 VAMEAQACGTPVVAARVGGLP-VAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGAAAVEHAA-GFSWAATADG  394 (405)
T ss_pred             HHHHHHHcCCCEEEecCCCcH-hhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH-hCCHHHHHHH
Confidence            999999999999999999998 88899999999998 999999999999998 8899999999999875 5999999999


Q ss_pred             HHHHHHHhcC
Q 044542          453 YERFFLRMKN  462 (465)
Q Consensus       453 ~~~~~~~~~~  462 (465)
                      +.++|.+++.
T Consensus       395 ~~~~y~~~~~  404 (405)
T TIGR03449       395 LLSSYRDALA  404 (405)
T ss_pred             HHHHHHHHhh
Confidence            9999998763

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.7e-42  Score=349.44  Aligned_cols=377  Identities=19%  Similarity=0.228  Sum_probs=269.1

Q ss_pred             CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc--------------c----------
Q 044542           76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND--------------V----------  131 (465)
Q Consensus        76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--------------~----------  131 (465)
                      ...+|||++|+.+..|-...||.+.++..|.++|++.||+|.|+++.........              .          
T Consensus       478 ~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  557 (977)
T PLN02939        478 TSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIW  557 (977)
T ss_pred             CCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEE
Confidence            4567999999998755578999999999999999999999999999775432110              0          


Q ss_pred             --cCCcceEEEeecC-C-------CccccC-------------------CCCCCcEEEecCCchh---H-Hhh-------
Q 044542          132 --HQGNLHVHFAAND-H-------GSVNLN-------------------NDGAFDYVHTESVSLP---H-WRA-------  171 (465)
Q Consensus       132 --~~~~~~v~~~~~~-~-------~~~~~~-------------------~~~~~DiI~~~~~~~~---~-~~~-------  171 (465)
                        ...+..++++... +       ..+.+.                   ...+|||||+|.|...   . +..       
T Consensus       558 ~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~  637 (977)
T PLN02939        558 TGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGF  637 (977)
T ss_pred             EEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccC
Confidence              0011223333211 0       111111                   2479999999998422   1 111       


Q ss_pred             hcCCcEEEEecchhHHHHhh-hhhhhhhhcCCCCCCC-chhhhh-hhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH--
Q 044542          172 KMVPNVAVTWHGIWYEVMHS-KLFGELFSNQNGVLPG-SMTELQ-EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI--  246 (465)
Q Consensus       172 ~~~p~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~--  246 (465)
                      ...+ .++++|+..+..... .....+ .-  +.... ....+. ....++-..+..+-.+|.|+++|+..++.+...  
T Consensus       638 ~~~k-tVfTIHNl~yQG~f~~~~l~~l-GL--~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G  713 (977)
T PLN02939        638 NSAR-ICFTCHNFEYQGTAPASDLASC-GL--DVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGG  713 (977)
T ss_pred             CCCc-EEEEeCCCcCCCcCCHHHHHHc-CC--CHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhc
Confidence            1235 999999986432111 011100 00  00000 000000 000000001123446899999999999988753  


Q ss_pred             ------hCCCCCCEEEecCCCCCCCccCCcc-----------------cCcccccccCCCCC--CcEEEEEeeccccccC
Q 044542          247 ------YQLPQRNVHVILNGVDETKFVHDPE-----------------AGVRFPEKLGVPAN--VSLVMGVAGRLVRDKG  301 (465)
Q Consensus       247 ------~~~~~~ki~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~g~~~~--~~~~l~~~Grl~~~Kg  301 (465)
                            ++....++.+|+||||.+.|.|..+                 .+..+++++|++.+  +..+|+++||+.++||
T Consensus       714 ~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKG  793 (977)
T PLN02939        714 RGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKG  793 (977)
T ss_pred             cchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccC
Confidence                  2446789999999999999987643                 24568899999853  3477889999999999


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEeCCcch---hHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAGTGPWG---RRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG~g~~~---~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      ++.+++|+..+.+  ++++|+|+|+|+..   +.++++    +  ++|.|+|.++......+|+.||++|+||.+ |+||
T Consensus       794 iDlLleA~~~Ll~--~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~-EPfG  870 (977)
T PLN02939        794 VHLIRHAIYKTAE--LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMF-EPCG  870 (977)
T ss_pred             hHHHHHHHHHHhh--cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCc-cCCc
Confidence            9999999998865  47899999999653   333332    2  689999999877788999999999999986 9999


Q ss_pred             HHHHHHHHcCCeEEecCCCCcceeeeee---------CCceEEeCC-CHHHHHHHHHHHHh---CChHHHHHHHHHHHHH
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVRTVVVN---------EELGYTFSP-NVKSFVEALELVIR---DGPKVLQRKGLACKEH  439 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~e~v~~---------~~~G~l~~~-d~~~la~~i~~ll~---~~~~~~~~~~~~~~~~  439 (465)
                      ++++|||+||+|+|++++||.. ++|.+         +.+|+++++ |+++++++|.+++.   ++++.+++|++++.  
T Consensus       871 LvqLEAMAyGtPPVVs~vGGL~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am--  947 (977)
T PLN02939        871 LTQMIAMRYGSVPIVRKTGGLN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM--  947 (977)
T ss_pred             HHHHHHHHCCCCEEEecCCCCc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH--
Confidence            9999999999999999999998 77765         478999999 99999999998875   23888888887653  


Q ss_pred             HHhhCCHHHHHHHHHHHHHHhcCC
Q 044542          440 ALSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       440 ~~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                       .++|||+.++++|+++|++++..
T Consensus       948 -~~dFSWe~~A~qYeeLY~~ll~~  970 (977)
T PLN02939        948 -NIDFSWDSSASQYEELYQRAVAR  970 (977)
T ss_pred             -HhcCCHHHHHHHHHHHHHHHHHh
Confidence             46799999999999999988653

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=1.7e-42  Score=341.56  Aligned_cols=354  Identities=18%  Similarity=0.151  Sum_probs=246.4

Q ss_pred             CCCCChHHHHHHHHHHHHHhCCc--EEEEEeCCCCCC----C---CCcccCCcceEEEeecCCCcc-------cc-----
Q 044542           92 GAAPGGMERHASTLYHALAARGH--EIHVFTAPSDRK----P---HNDVHQGNLHVHFAANDHGSV-------NL-----  150 (465)
Q Consensus        92 ~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~----~---~~~~~~~~~~v~~~~~~~~~~-------~~-----  150 (465)
                      +|..||+++++.+|+++|+++||  +|+|+|......    .   ..+....+..+...+.....+       .+     
T Consensus        22 ~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~  101 (439)
T TIGR02472        22 DADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELA  101 (439)
T ss_pred             CCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHH
Confidence            36789999999999999999997  999999653221    0   111112333444443222111       01     


Q ss_pred             ------CC--CCCCcEEEecCCc--hhHH-h--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhH
Q 044542          151 ------NN--DGAFDYVHTESVS--LPHW-R--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMP  217 (465)
Q Consensus       151 ------~~--~~~~DiI~~~~~~--~~~~-~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (465)
                            .+  ..+|||||+|++.  +... +  ..++| ++.+.|+...... .    ..... ......+ ...+....
T Consensus       102 ~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p-~V~t~H~~~~~~~-~----~~~~~-~~~~~~~-~~~~~~~~  173 (439)
T TIGR02472       102 DNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVP-LIFTGHSLGREKR-R----RLLAA-GLKPQQI-EKQYNISR  173 (439)
T ss_pred             HHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCC-EEEecccccchhh-h----hcccC-CCChhhh-hhhcchHH
Confidence                  02  2479999999752  1111 1  23568 9999998532110 0    00000 0000000 01111222


Q ss_pred             HHHHHHHhhcccCEEEEeChhHHH-HHHHHhCCCCCCEEEecCCCCCCCccCCcccCc--cc---ccccCCCCCCcEEEE
Q 044542          218 RLVDEIRFFSSYNQHICISNSAAE-VLVKIYQLPQRNVHVILNGVDETKFVHDPEAGV--RF---PEKLGVPANVSLVMG  291 (465)
Q Consensus       218 ~~~~~~~~~~~~d~ii~~S~~~~~-~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~--~~---r~~~g~~~~~~~~l~  291 (465)
                      +...+...++.+|.++++|+.... .+....+++++|+.+||||+|.+.|.+......  ..   +++++..+++ .+++
T Consensus       174 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~  252 (439)
T TIGR02472       174 RIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEK-PPIL  252 (439)
T ss_pred             HHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCC-cEEE
Confidence            222345678999999999876443 333333678899999999999998876432111  11   1234444454 5777


Q ss_pred             EeeccccccCHHHHHHHHHHhhhcCCCeEE-EEEeCCcchhH---------------HHHh--cCCeEEcCCCChhHHHH
Q 044542          292 VAGRLVRDKGHPLLYEAFSSITRDHPGVYL-LVAGTGPWGRR---------------YAEL--GQNVKVLGALEAHQLSE  353 (465)
Q Consensus       292 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~---------------~~~l--~~~V~~~g~v~~~~~~~  353 (465)
                      ++||+.+.||++.+++|++.+.+..++.++ +++|+|+..+.               .+++  .++|+|+|+++.+++.+
T Consensus       253 ~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~  332 (439)
T TIGR02472       253 AISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPE  332 (439)
T ss_pred             EEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHH
Confidence            999999999999999999875321122333 35787654211               1222  27899999999999999


Q ss_pred             HHHhc----CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHH
Q 044542          354 FYNAL----DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKV  428 (465)
Q Consensus       354 ~~~~a----Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~  428 (465)
                      +|+.|    |++++||.+ |+||++++|||+||+|||+|+.||.+ |++.++.+|+++++ |+++++++|.+++++ ++.
T Consensus       333 ~~~~a~~~~Dv~v~pS~~-E~fg~~~lEAma~G~PvV~s~~gg~~-eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~  409 (439)
T TIGR02472       333 LYRLAARSRGIFVNPALT-EPFGLTLLEAAACGLPIVATDDGGPR-DIIANCRNGLLVDVLDLEAIASALEDALSD-SSQ  409 (439)
T ss_pred             HHHHHhhcCCEEeccccc-CCcccHHHHHHHhCCCEEEeCCCCcH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHH
Confidence            99987    999999986 99999999999999999999999998 89999999999999 999999999999998 889


Q ss_pred             HHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          429 LQRKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       429 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      +++|++++++++.++|||+.++++|.+++
T Consensus       410 ~~~~~~~a~~~~~~~fsw~~~~~~~~~l~  438 (439)
T TIGR02472       410 WQLWSRNGIEGVRRHYSWDAHVEKYLRIL  438 (439)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            99999999999999999999999999886

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=3.2e-42  Score=340.28  Aligned_cols=372  Identities=19%  Similarity=0.225  Sum_probs=263.6

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC--------ccc---C----------Cc
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN--------DVH---Q----------GN  135 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--------~~~---~----------~~  135 (465)
                      |++|||++++.+.-+-...||...++..|.++|++.||+|.|+.+........        ...   .          .+
T Consensus         1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (485)
T PRK14099          1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGG   80 (485)
T ss_pred             CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCC
Confidence            35799999998764447999999999999999999999999999976443210        010   0          11


Q ss_pred             ceEEEeec-----CCC-cc------ccC---------------------CCCCCcEEEecCCc--h-hHHhh----hcCC
Q 044542          136 LHVHFAAN-----DHG-SV------NLN---------------------NDGAFDYVHTESVS--L-PHWRA----KMVP  175 (465)
Q Consensus       136 ~~v~~~~~-----~~~-~~------~~~---------------------~~~~~DiI~~~~~~--~-~~~~~----~~~p  175 (465)
                      ..+.++..     +.+ ..      .+.                     ...+|||||+|++.  + +.++.    .++|
T Consensus        81 v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~  160 (485)
T PRK14099         81 LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPG  160 (485)
T ss_pred             ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCC
Confidence            22222211     111 11      011                     14689999999863  2 22222    1346


Q ss_pred             cEEEEecchhHHHHh-hhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHh-------
Q 044542          176 NVAVTWHGIWYEVMH-SKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIY-------  247 (465)
Q Consensus       176 ~~v~~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~-------  247 (465)
                       .|.|+|+..+.... ......+...  +...... .. .+.......+..+..+|.|+++|+..++.+++.+       
T Consensus       161 -~V~TiHn~~~qg~~~~~~~~~~~~~--~~~~~~~-~~-~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~  235 (485)
T PRK14099        161 -TVFTIHNLAFQGQFPRELLGALGLP--PSAFSLD-GV-EYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDG  235 (485)
T ss_pred             -EEEeCCCCCCCCcCCHHHHHHcCCC--hHHcCch-hh-hhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHH
Confidence             99999997532110 0111000000  0000000 00 0000001122567899999999999999887532       


Q ss_pred             --CCCCCCEEEecCCCCCCCccCCccc-----------------CcccccccCCCCC-CcEEEEEeeccccccCHHHHHH
Q 044542          248 --QLPQRNVHVILNGVDETKFVHDPEA-----------------GVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLLYE  307 (465)
Q Consensus       248 --~~~~~ki~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~ll~  307 (465)
                        +.+.+++.+|+||||.+.|.+....                 +..+++++|++.+ ..++++++||+.++||++.+++
T Consensus       236 ~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~  315 (485)
T PRK14099        236 LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLE  315 (485)
T ss_pred             HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHH
Confidence              1246899999999999988775431                 2457788999753 3477889999999999999999


Q ss_pred             HHHHhhhcCCCeEEEEEeCCcc--hhHHHHh----cCCe-EEcCCCChhHHHHHH-HhcCeEEecccCCCCCcHHHHHHH
Q 044542          308 AFSSITRDHPGVYLLVAGTGPW--GRRYAEL----GQNV-KVLGALEAHQLSEFY-NALDVFVNPTLRPQGLDLTLIEAM  379 (465)
Q Consensus       308 a~~~l~~~~~~~~l~ivG~g~~--~~~~~~l----~~~V-~~~g~v~~~~~~~~~-~~aDv~v~ps~~~eg~~~~~~EAm  379 (465)
                      |+..+.+  .+++|+|+|+|+.  ++.++++    ..++ .++|+  ++++..+| +.||++++||.+ |+||++++|||
T Consensus       316 A~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~-E~fGl~~lEAm  390 (485)
T PRK14099        316 ALPTLLG--EGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY--DEALAHLIQAGADALLVPSRF-EPCGLTQLCAL  390 (485)
T ss_pred             HHHHHHh--cCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHhcCCEEEECCcc-CCCcHHHHHHH
Confidence            9999875  3789999999863  4455544    3455 68998  48888887 569999999986 99999999999


Q ss_pred             HcCCeEEecCCCCcceeeeeeC---------CceEEeCC-CHHHHHHHHHH---HHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542          380 HCGRTVLTPNYPSIVRTVVVNE---------ELGYTFSP-NVKSFVEALEL---VIRDGPKVLQRKGLACKEHALSMFTA  446 (465)
Q Consensus       380 a~G~PvI~s~~gg~~~e~v~~~---------~~G~l~~~-d~~~la~~i~~---ll~~~~~~~~~~~~~~~~~~~~~fs~  446 (465)
                      +||+|+|++++||.+ |++.++         .+|+++++ |+++|+++|.+   ++++ ++.+++|+++++   .++|||
T Consensus       391 a~G~ppVvs~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~---~~~fSw  465 (485)
T PRK14099        391 RYGAVPVVARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM---TTDVSW  465 (485)
T ss_pred             HCCCCcEEeCCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh---hhcCCh
Confidence            999988889999998 777665         58999999 99999999997   6667 888999998886   367999


Q ss_pred             HHHHHHHHHHHHHhcCC
Q 044542          447 TKMASAYERFFLRMKNP  463 (465)
Q Consensus       447 ~~~~~~~~~~~~~~~~~  463 (465)
                      ++++++|+++|++++++
T Consensus       466 ~~~a~~y~~lY~~l~~~  482 (485)
T PRK14099        466 RNPAQHYAALYRSLVAE  482 (485)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998754

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=7.2e-42  Score=330.79  Aligned_cols=334  Identities=16%  Similarity=0.274  Sum_probs=259.8

Q ss_pred             eEEEEe-CCCCCCC-CCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC------Cccc---
Q 044542           81 KLAVFS-KTWPIGA-APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------GSVN---  149 (465)
Q Consensus        81 kIl~v~-~~~p~~~-~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~---  149 (465)
                      ||++++ +.+|.++ ..||+|+++..+++.|+.   +|++++....+....+....+..+++.....      +.|.   
T Consensus         4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (380)
T PRK15484          4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLD   80 (380)
T ss_pred             eEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccC
Confidence            666655 5676533 478999999999999943   9999999887644443444444454442211      1111   


Q ss_pred             ---cC----------CCCCCcEEEecCCchh-HHhhhcCC--cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhh
Q 044542          150 ---LN----------NDGAFDYVHTESVSLP-HWRAKMVP--NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ  213 (465)
Q Consensus       150 ---~~----------~~~~~DiI~~~~~~~~-~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (465)
                         +.          ...++|+||+|+.... ..+....|  +++.++|+.+..                          
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~vi~v~~~~~~~~~~~~~~~~~~~v~~~h~~~~~--------------------------  134 (380)
T PRK15484         81 PLPYSQRILNIAHKFTITKDSVIVIHNSMKLYRQIRERAPQAKLVMHMHNAFEP--------------------------  134 (380)
T ss_pred             chhHHHHHHHHHHhcCCCCCcEEEEeCcHHhHHHHHhhCCCCCEEEEEecccCh--------------------------
Confidence               00          3467999999985422 22222222  388999963210                          


Q ss_pred             hhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEe
Q 044542          214 EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVA  293 (465)
Q Consensus       214 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~  293 (465)
                                ..+.+++.++++|++.++.+.+.  .+..++.+||||+|.+.|.+...  ..++++++++.+. .+++++
T Consensus       135 ----------~~~~~~~~ii~~S~~~~~~~~~~--~~~~~i~vIpngvd~~~~~~~~~--~~~~~~~~~~~~~-~~il~~  199 (380)
T PRK15484        135 ----------ELLDKNAKIIVPSQFLKKFYEER--LPNADISIVPNGFCLETYQSNPQ--PNLRQQLNISPDE-TVLLYA  199 (380)
T ss_pred             ----------hHhccCCEEEEcCHHHHHHHHhh--CCCCCEEEecCCCCHHHcCCcch--HHHHHHhCCCCCC-eEEEEe
Confidence                      22346789999999999998874  35678999999999887765432  3456778877665 677899


Q ss_pred             eccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch---------hHHH----HhcCCeEEcCCCChhHHHHHHHhcCe
Q 044542          294 GRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG---------RRYA----ELGQNVKVLGALEAHQLSEFYNALDV  360 (465)
Q Consensus       294 Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~---------~~~~----~l~~~V~~~g~v~~~~~~~~~~~aDv  360 (465)
                      ||+.+.||++.+++|++.+.+++|+++|+|+|+|+..         +.++    +++.+|.|+|+++++++..+|++||+
T Consensus       200 Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv  279 (380)
T PRK15484        200 GRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADL  279 (380)
T ss_pred             ccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCE
Confidence            9999999999999999999988899999999987531         1222    33478999999999999999999999


Q ss_pred             EEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceE-EeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHH
Q 044542          361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGY-TFSP-NVKSFVEALELVIRDGPKVLQRKGLACKE  438 (465)
Q Consensus       361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~-l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~  438 (465)
                      +++||.+.|+||++++|||+||+|||+++.||.+ |++.++.+|+ ++++ |+++++++|.+++++ ++. .++++++++
T Consensus       280 ~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~-Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d-~~~-~~~~~~ar~  356 (380)
T PRK15484        280 VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGIT-EFVLEGITGYHLAEPMTSDSIISDINRTLAD-PEL-TQIAEQAKD  356 (380)
T ss_pred             EEeCCCCccccccHHHHHHHcCCCEEEeCCCCcH-hhcccCCceEEEeCCCCHHHHHHHHHHHHcC-HHH-HHHHHHHHH
Confidence            9999976699999999999999999999999998 8999999998 4566 999999999999998 664 789999999


Q ss_pred             HHHhhCCHHHHHHHHHHHHHHhc
Q 044542          439 HALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       439 ~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      .+.++|+|++++++++++|++..
T Consensus       357 ~~~~~fsw~~~a~~~~~~l~~~~  379 (380)
T PRK15484        357 FVFSKYSWEGVTQRFEEQIHNWF  379 (380)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999998754

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=2.5e-42  Score=344.12  Aligned_cols=368  Identities=22%  Similarity=0.257  Sum_probs=265.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-------------------------ccCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-------------------------VHQG  134 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-------------------------~~~~  134 (465)
                      |||++++.++++....||.+.++..|.++|+++||+|+|+++.........                         ....
T Consensus         1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (473)
T TIGR02095         1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE   80 (473)
T ss_pred             CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence            799999998654467999999999999999999999999998765432210                         0111


Q ss_pred             cceEEEeecCC-----C-ccc--cC-------------------CCCCCcEEEecCCc--h-hHHhhh--c---CCcEEE
Q 044542          135 NLHVHFAANDH-----G-SVN--LN-------------------NDGAFDYVHTESVS--L-PHWRAK--M---VPNVAV  179 (465)
Q Consensus       135 ~~~v~~~~~~~-----~-~~~--~~-------------------~~~~~DiI~~~~~~--~-~~~~~~--~---~p~~v~  179 (465)
                      +..+.+.....     + .+.  +.                   ...+|||||+|.+.  + +.+++.  +   +| ++.
T Consensus        81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~-~v~  159 (473)
T TIGR02095        81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIK-TVF  159 (473)
T ss_pred             CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCC-EEE
Confidence            22333322110     1 111  11                   34689999999863  2 222222  1   56 999


Q ss_pred             EecchhHHHHh-hhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH-hC--------C
Q 044542          180 TWHGIWYEVMH-SKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI-YQ--------L  249 (465)
Q Consensus       180 ~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~--------~  249 (465)
                      ++|+..+.... ....... ..  +... +.........+....+..+..+|.++++|+..++.+.+. ++        .
T Consensus       160 TiH~~~~~g~~~~~~~~~~-~~--~~~~-~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~  235 (473)
T TIGR02095       160 TIHNLAYQGVFPADDFSEL-GL--PPEY-FHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKA  235 (473)
T ss_pred             EcCCCccCCcCCHHHHHHc-CC--ChHH-cCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHh
Confidence            99987532100 0000000 00  0000 000000000011112356789999999999998887642 22        2


Q ss_pred             CCCCEEEecCCCCCCCccCCcc-----------------cCcccccccCCCCC-CcEEEEEeeccccccCHHHHHHHHHH
Q 044542          250 PQRNVHVILNGVDETKFVHDPE-----------------AGVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLLYEAFSS  311 (465)
Q Consensus       250 ~~~ki~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~ll~a~~~  311 (465)
                      ++.++.+|+||+|.+.|.|..+                 .+..+++++|++.+ +.++++++||+.++||++.+++|+.+
T Consensus       236 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~  315 (473)
T TIGR02095       236 RSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPE  315 (473)
T ss_pred             cCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHH
Confidence            3579999999999998876432                 12347888898762 34778899999999999999999999


Q ss_pred             hhhcCCCeEEEEEeCCc--chhHHHHhc----CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeE
Q 044542          312 ITRDHPGVYLLVAGTGP--WGRRYAELG----QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTV  385 (465)
Q Consensus       312 l~~~~~~~~l~ivG~g~--~~~~~~~l~----~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~Pv  385 (465)
                      +.++  +++|+|+|+|+  ..+.++++.    .++.+.+..+.+++..+|++||++++||.+ |+||++++|||+||+||
T Consensus       316 l~~~--~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~-E~~gl~~lEAma~G~pv  392 (473)
T TIGR02095       316 LLEL--GGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRF-EPCGLTQLYAMRYGTVP  392 (473)
T ss_pred             HHHc--CcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCCCc-CCcHHHHHHHHHCCCCe
Confidence            9764  59999999984  344454443    678888888888899999999999999986 99999999999999999


Q ss_pred             EecCCCCcceeeeeeC------CceEEeCC-CHHHHHHHHHHHHh----CChHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          386 LTPNYPSIVRTVVVNE------ELGYTFSP-NVKSFVEALELVIR----DGPKVLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       386 I~s~~gg~~~e~v~~~------~~G~l~~~-d~~~la~~i~~ll~----~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                      |+++.||.. +++.++      .+|+++++ |+++++++|.+++.    + ++.+++|++++.   +++|||++++++|.
T Consensus       393 I~s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~-~~~~~~~~~~~~---~~~fsw~~~a~~~~  467 (473)
T TIGR02095       393 IVRRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQD-PSLWEALQKNAM---SQDFSWDKSAKQYV  467 (473)
T ss_pred             EEccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHh---ccCCCcHHHHHHHH
Confidence            999999998 888887      89999999 99999999999888    6 888888888775   46799999999999


Q ss_pred             HHHHHh
Q 044542          455 RFFLRM  460 (465)
Q Consensus       455 ~~~~~~  460 (465)
                      ++|+++
T Consensus       468 ~~Y~~l  473 (473)
T TIGR02095       468 ELYRSL  473 (473)
T ss_pred             HHHHhC
Confidence            999864

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=1.2e-41  Score=336.68  Aligned_cols=371  Identities=17%  Similarity=0.211  Sum_probs=263.6

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-----------cc--cCC---------
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-----------DV--HQG---------  134 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-----------~~--~~~---------  134 (465)
                      .++|||++++.+.-+-...||...++..|.++|++.||+|.|+.+........           ..  ...         
T Consensus         3 ~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (489)
T PRK14098          3 RRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVK   82 (489)
T ss_pred             CCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEE
Confidence            34599999998764347999999999999999999999999999976433210           00  000         


Q ss_pred             -------cceEEEee-----cCCCccc-------cC-------------------CCCCCcEEEecCCc---hhHHhh--
Q 044542          135 -------NLHVHFAA-----NDHGSVN-------LN-------------------NDGAFDYVHTESVS---LPHWRA--  171 (465)
Q Consensus       135 -------~~~v~~~~-----~~~~~~~-------~~-------------------~~~~~DiI~~~~~~---~~~~~~--  171 (465)
                             ...+.++.     .+.+.+.       +.                   ...+|||||+|++.   ++.++.  
T Consensus        83 ~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~  162 (489)
T PRK14098         83 VTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTV  162 (489)
T ss_pred             EecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHH
Confidence                   01111111     0001111       11                   24689999999863   222232  


Q ss_pred             -------hcCCcEEEEecchhHHHHh-hhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHH
Q 044542          172 -------KMVPNVAVTWHGIWYEVMH-SKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVL  243 (465)
Q Consensus       172 -------~~~p~~v~~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~  243 (465)
                             .++| +|.++|+....... ...+...  .  +.  .............-..+..+..+|.|+++|+..++.+
T Consensus       163 ~~~~~~~~~~~-~V~TiHn~~~qg~~~~~~~~~~--~--~~--~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei  235 (489)
T PRK14098        163 YADHEFFKDIK-TVLTIHNVYRQGVLPFKVFQKL--L--PE--EVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEI  235 (489)
T ss_pred             hhhccccCCCC-EEEEcCCCcccCCCCHHHHHHh--C--CH--HhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHh
Confidence                   1467 99999986432100 0000000  0  00  0000000000001112255688999999999999988


Q ss_pred             HHH----hCCC------CCCEEEecCCCCCCCccCCccc-----------------CcccccccCCCCC-CcEEEEEeec
Q 044542          244 VKI----YQLP------QRNVHVILNGVDETKFVHDPEA-----------------GVRFPEKLGVPAN-VSLVMGVAGR  295 (465)
Q Consensus       244 ~~~----~~~~------~~ki~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~~~-~~~~l~~~Gr  295 (465)
                      ++.    +|++      ..++.+|+||||.+.|.|....                 +..+++++|++.+ +.++++++||
T Consensus       236 ~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgR  315 (489)
T PRK14098        236 AGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIIN  315 (489)
T ss_pred             CcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEecc
Confidence            752    3443      6799999999999998875421                 2345667788643 3478889999


Q ss_pred             cccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcc--hhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          296 LVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW--GRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       296 l~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      +.++||++.+++|+.++.+  ++++|+|+|+|+.  ++.++++    .++|.+.|.++++++..+|++||++++||.. |
T Consensus       316 l~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~-E  392 (489)
T PRK14098        316 FDDFQGAELLAESLEKLVE--LDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDMLLMPGKI-E  392 (489)
T ss_pred             ccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCEEEeCCCC-C
Confidence            9999999999999999976  4799999999874  3445443    4789999999999999999999999999976 9


Q ss_pred             CCcHHHHHHHHcCCeEEecCCCCcceeeeee----CCceEEeCC-CHHHHHHHHHHHH---hCChHHHHHHHHHHHHHHH
Q 044542          370 GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN----EELGYTFSP-NVKSFVEALELVI---RDGPKVLQRKGLACKEHAL  441 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s~~gg~~~e~v~~----~~~G~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~~~~~~~  441 (465)
                      +||++.+|||+||+|+|++++||.. |.+.+    +.+|+++++ |+++++++|.+++   ++ ++.++++++++   ++
T Consensus       393 ~~Gl~~lEAma~G~ppVv~~~GGl~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~-~~~~~~~~~~~---~~  467 (489)
T PRK14098        393 SCGMLQMFAMSYGTIPVAYAGGGIV-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHD-EERWEELVLEA---ME  467 (489)
T ss_pred             CchHHHHHHHhCCCCeEEecCCCCc-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcC-HHHHHHHHHHH---hc
Confidence            9999999999999999999999998 66654    679999999 9999999999865   45 67777776654   45


Q ss_pred             hhCCHHHHHHHHHHHHHHhcC
Q 044542          442 SMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       442 ~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      ++|||++++++|+++|+++++
T Consensus       468 ~~fsw~~~a~~y~~lY~~~~~  488 (489)
T PRK14098        468 RDFSWKNSAEEYAQLYRELLG  488 (489)
T ss_pred             CCCChHHHHHHHHHHHHHHhc
Confidence            779999999999999998864

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=3.8e-41  Score=328.94  Aligned_cols=349  Identities=24%  Similarity=0.336  Sum_probs=262.0

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCc--c-cc------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGS--V-NL------  150 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~-~~------  150 (465)
                      |||++++..||+ ...||.++++.+++++|.+. ++|+|++.......     ..+..+.........  . ..      
T Consensus         1 mkI~~i~~~~~p-~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (388)
T TIGR02149         1 MKVTVLTREYPP-NVYGGAGVHVEELTRELARL-MDVDVRCFGDQRFD-----SEGLTVKGYRPWSELKEANKALGTFSV   73 (388)
T ss_pred             CeeEEEecccCc-cccccHhHHHHHHHHHHHHh-cCeeEEcCCCchhc-----CCCeEEEEecChhhccchhhhhhhhhH
Confidence            799999999874 34599999999999999987 77777776543211     112222211111000  0 00      


Q ss_pred             -----CCCCCCcEEEecCCch--hHHh---hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHH
Q 044542          151 -----NNDGAFDYVHTESVSL--PHWR---AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLV  220 (465)
Q Consensus       151 -----~~~~~~DiI~~~~~~~--~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (465)
                           ....++|+||+|++..  ..++   ..++| ++.++|+......   +....      ....  ..+..++    
T Consensus        74 ~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~---~~~~~------~~~~--~~~~~~~----  137 (388)
T TIGR02149        74 DLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKP-LVVTAHSLEPLRP---WKEEQ------LGGG--YKLSSWA----  137 (388)
T ss_pred             HHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCC-EEEEeeccccccc---ccccc------cccc--hhHHHHH----
Confidence                 0345799999997532  2222   23567 9999998642110   00000      0000  0111222    


Q ss_pred             HHHHhhcccCEEEEeChhHHHHHHHHh-CCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccc
Q 044542          221 DEIRFFSSYNQHICISNSAAEVLVKIY-QLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD  299 (465)
Q Consensus       221 ~~~~~~~~~d~ii~~S~~~~~~~~~~~-~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~  299 (465)
                       +...++.+|.++++|+.+++.+.+.+ +++..++.++|||+|.+.+.+..  ....+++++++++. .+++++||+.+.
T Consensus       138 -~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~--~~~~~~~~~~~~~~-~~i~~~Grl~~~  213 (388)
T TIGR02149       138 -EKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDD--GNVVLDRYGIDRSR-PYILFVGRITRQ  213 (388)
T ss_pred             -HHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCc--hHHHHHHhCCCCCc-eEEEEEcccccc
Confidence             23667899999999999999998877 67778999999999998876542  24567788887665 677899999999


Q ss_pred             cCHHHHHHHHHHhhhcCCCeEEEEEeCCcch----hHHHH----hc---CCeEEc-CCCChhHHHHHHHhcCeEEecccC
Q 044542          300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWG----RRYAE----LG---QNVKVL-GALEAHQLSEFYNALDVFVNPTLR  367 (465)
Q Consensus       300 Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~----~~~~~----l~---~~V~~~-g~v~~~~~~~~~~~aDv~v~ps~~  367 (465)
                      ||++.+++|++++.   ++++++++|+|+..    +.+++    +.   ++|.+. |.++.+++..+|+.||++++||.+
T Consensus       214 Kg~~~li~a~~~l~---~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~  290 (388)
T TIGR02149       214 KGVPHLLDAVHYIP---KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIY  290 (388)
T ss_pred             cCHHHHHHHHHHHh---hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCcc
Confidence            99999999999985   36789998876542    22222    22   346664 678999999999999999999976


Q ss_pred             CCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CH------HHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542          368 PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NV------KSFVEALELVIRDGPKVLQRKGLACKEHA  440 (465)
Q Consensus       368 ~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~------~~la~~i~~ll~~~~~~~~~~~~~~~~~~  440 (465)
                       |++|++++|||++|+|||+++.|+.+ |++.++.+|+++++ |+      ++++++|.+++++ ++.+++|++++++.+
T Consensus       291 -e~~g~~~lEA~a~G~PvI~s~~~~~~-e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~  367 (388)
T TIGR02149       291 -EPLGIVNLEAMACGTPVVASATGGIP-EVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAKKMGIAGRKRA  367 (388)
T ss_pred             -CCCChHHHHHHHcCCCEEEeCCCCHH-HHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence             99999999999999999999999998 89999999999998 87      9999999999998 899999999999999


Q ss_pred             HhhCCHHHHHHHHHHHHHHhc
Q 044542          441 LSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       441 ~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      .++|||+.+++++.++|++++
T Consensus       368 ~~~~s~~~~~~~~~~~y~~~~  388 (388)
T TIGR02149       368 EEEFSWGSIAKKTVEMYRKVL  388 (388)
T ss_pred             HHhCCHHHHHHHHHHHHHhhC
Confidence            999999999999999999764

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.4e-41  Score=327.30  Aligned_cols=340  Identities=23%  Similarity=0.347  Sum_probs=260.4

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC------CCc------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND------HGS------  147 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~------  147 (465)
                      |||++++.     +..||+++++.+++++|.+.||+|+|++..........  .....+......      ...      
T Consensus         1 mki~~~~~-----p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (371)
T cd04962           1 MKIGIVCY-----PTYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY--SPNIFFHEVEVPQYPLFQYPPYDLALA   73 (371)
T ss_pred             CceeEEEE-----eCCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh--ccCeEEEEecccccchhhcchhHHHHH
Confidence            79999984     36799999999999999999999999997643211111  111111111100      000      


Q ss_pred             ---cccCCCCCCcEEEecCCc---hhHHhh------hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542          148 ---VNLNNDGAFDYVHTESVS---LPHWRA------KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA  215 (465)
Q Consensus       148 ---~~~~~~~~~DiI~~~~~~---~~~~~~------~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (465)
                         .+..++.+||+||+|.+.   ...++.      .++| +++++|+........          .        .....
T Consensus        74 ~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~----------~--------~~~~~  134 (371)
T cd04962          74 SKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLP-VVTTLHGTDITLVGQ----------D--------PSFQP  134 (371)
T ss_pred             HHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCc-EEEEEcCCccccccc----------c--------ccchH
Confidence               011167799999998642   122222      1567 899999753211000          0        00111


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeec
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGR  295 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Gr  295 (465)
                      +     .+..++++|.++++|+..++.+.+.++ ...++.++|||+|...+.+...  ...+++++++++. .+++++|+
T Consensus       135 ~-----~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~i~vi~n~~~~~~~~~~~~--~~~~~~~~~~~~~-~~il~~g~  205 (371)
T cd04962         135 A-----TRFSIEKSDGVTAVSESLRQETYELFD-ITKEIEVIPNFVDEDRFRPKPD--EALKRRLGAPEGE-KVLIHISN  205 (371)
T ss_pred             H-----HHHHHhhCCEEEEcCHHHHHHHHHhcC-CcCCEEEecCCcCHhhcCCCch--HHHHHhcCCCCCC-eEEEEecc
Confidence            1     125568899999999999999988654 4678999999999877655432  3345667777666 67789999


Q ss_pred             cccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          296 LVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       296 l~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      +.+.||++.+++|+..+.++ ++++++++|.|+..+.++++    +  ++|.|.|+.  +++.++|+.||++++||.. |
T Consensus       206 l~~~K~~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~-E  281 (371)
T cd04962         206 FRPVKRIDDVIRIFAKVRKE-VPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLFLLPSEK-E  281 (371)
T ss_pred             cccccCHHHHHHHHHHHHhc-CCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEEEeCCCc-C
Confidence            99999999999999998766 56899999999876655443    2  689999987  6899999999999999975 9


Q ss_pred             CCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHH
Q 044542          370 GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATK  448 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  448 (465)
                      ++|++++|||++|+|||+++.|+.+ +++.++.+|+++++ |+++++++|.+++++ ++.+.+|++++++.+.++|+|+.
T Consensus       282 ~~~~~~~EAma~g~PvI~s~~~~~~-e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~  359 (371)
T cd04962         282 SFGLAALEAMACGVPVVASNAGGIP-EVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSER  359 (371)
T ss_pred             CCccHHHHHHHcCCCEEEeCCCCch-hhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHH
Confidence            9999999999999999999999998 89999999999999 999999999999998 89999999999999888899999


Q ss_pred             HHHHHHHHHHHh
Q 044542          449 MASAYERFFLRM  460 (465)
Q Consensus       449 ~~~~~~~~~~~~  460 (465)
                      ++++|.++|+++
T Consensus       360 ~~~~~~~~y~~~  371 (371)
T cd04962         360 IVPQYEALYRRL  371 (371)
T ss_pred             HHHHHHHHHHhC
Confidence            999999999864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.2e-40  Score=325.92  Aligned_cols=348  Identities=21%  Similarity=0.227  Sum_probs=256.7

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-CcccCCcceEEEeec--CCCccc-------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH-NDVHQGNLHVHFAAN--DHGSVN-------  149 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-~~~~~~~~~v~~~~~--~~~~~~-------  149 (465)
                      |||+++++.+    ..||+++++..|+++|.++||+|+++|........ .+...+...++....  ....+.       
T Consensus         1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   76 (392)
T cd03805           1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCA   76 (392)
T ss_pred             CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHH
Confidence            7999999875    57999999999999999999999999975432211 122222233333211  111110       


Q ss_pred             ------------cCCCCCCcEEEecCCchhHHhh---hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542          150 ------------LNNDGAFDYVHTESVSLPHWRA---KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE  214 (465)
Q Consensus       150 ------------~~~~~~~DiI~~~~~~~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (465)
                                  .....++|+||+++......+.   ...| +++..|......  ..            ...+...++.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~--~~------------~~~~~~~~~~  141 (392)
T cd03805          77 YLRMLYLALYLLLLPDEKYDVFIVDQVSACVPLLKLFSPSK-ILFYCHFPDQLL--AQ------------RGSLLKRLYR  141 (392)
T ss_pred             HHHHHHHHHHHHhcccCCCCEEEEcCcchHHHHHHHhcCCc-EEEEEecChHHh--cC------------CCcHHHHHHH
Confidence                        1256789999998754332221   1234 888888432110  00            0001111111


Q ss_pred             hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCC-CEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEe
Q 044542          215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQR-NVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVA  293 (465)
Q Consensus       215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~-ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~  293 (465)
                      ...+ ..+...++.+|.++++|+..++.+.+.++.... ++.+|+||+|.+.+.+.....  .++....+++. ++++++
T Consensus       142 ~~~~-~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~--~~~~~~~~~~~-~~i~~~  217 (392)
T cd03805         142 KPFD-WLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP--DPGLLIPKSGK-KTFLSI  217 (392)
T ss_pred             HHHH-HHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc--cccccccCCCc-eEEEEE
Confidence            1111 123467899999999999999999887754333 346999999998776543321  22333334444 788899


Q ss_pred             eccccccCHHHHHHHHHHhhhcC---CCeEEEEEeCCcch--------hHH----HH-h--cCCeEEcCCCChhHHHHHH
Q 044542          294 GRLVRDKGHPLLYEAFSSITRDH---PGVYLLVAGTGPWG--------RRY----AE-L--GQNVKVLGALEAHQLSEFY  355 (465)
Q Consensus       294 Grl~~~Kg~~~ll~a~~~l~~~~---~~~~l~ivG~g~~~--------~~~----~~-l--~~~V~~~g~v~~~~~~~~~  355 (465)
                      ||+.+.||++.+++|++++.+++   ++++|+++|+|+.+        +.+    ++ +  .++|.|+|+++.+++..+|
T Consensus       218 grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l  297 (392)
T cd03805         218 NRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL  297 (392)
T ss_pred             eeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence            99999999999999999998886   79999999987542        222    23 2  3789999999999999999


Q ss_pred             HhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHH
Q 044542          356 NALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLA  435 (465)
Q Consensus       356 ~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~  435 (465)
                      +.||++++||.. |+||++++|||+||+|||+++.||.. +++.++.+|+++++|+++++++|.+++++ ++.+++++++
T Consensus       298 ~~ad~~l~~s~~-E~~g~~~lEAma~G~PvI~s~~~~~~-e~i~~~~~g~~~~~~~~~~a~~i~~l~~~-~~~~~~~~~~  374 (392)
T cd03805         298 SSARALLYTPSN-EHFGIVPLEAMYAGKPVIACNSGGPL-ETVVDGETGFLCEPTPEEFAEAMLKLAND-PDLADRMGAA  374 (392)
T ss_pred             hhCeEEEECCCc-CCCCchHHHHHHcCCCEEEECCCCcH-HHhccCCceEEeCCCHHHHHHHHHHHHhC-hHHHHHHHHH
Confidence            999999999975 99999999999999999999999988 88889899999977999999999999999 8889999999


Q ss_pred             HHHHHHhhCCHHHHHHHH
Q 044542          436 CKEHALSMFTATKMASAY  453 (465)
Q Consensus       436 ~~~~~~~~fs~~~~~~~~  453 (465)
                      ++++++++|||+.+++++
T Consensus       375 a~~~~~~~~s~~~~~~~~  392 (392)
T cd03805         375 GRKRVKEKFSTEAFAERL  392 (392)
T ss_pred             HHHHHHHhcCHHHHhhhC
Confidence            999999999999998764

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-40  Score=325.77  Aligned_cols=347  Identities=19%  Similarity=0.252  Sum_probs=249.8

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC---CccccC------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH---GSVNLN------  151 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------  151 (465)
                      |||+|+.+||.         ....|+++|.++||+|+++|.........    +...+++.....   +.+.+.      
T Consensus         1 ~il~~~~~~p~---------~~~~la~~L~~~G~~v~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~   67 (396)
T cd03818           1 RILFVHQNFPG---------QFRHLAPALAAQGHEVVFLTEPNAAPPPG----GVRVVRYRPPRGPTSGTHPYLREFEEA   67 (396)
T ss_pred             CEEEECCCCch---------hHHHHHHHHHHCCCEEEEEecCCCCCCCC----CeeEEEecCCCCCCCCCCccchhHHHH
Confidence            69999999972         15679999999999999999887644322    222222222111   111111      


Q ss_pred             ----------------CCCCCcEEEecCCch-hHHhhh---cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhh
Q 044542          152 ----------------NDGAFDYVHTESVSL-PHWRAK---MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTE  211 (465)
Q Consensus       152 ----------------~~~~~DiI~~~~~~~-~~~~~~---~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (465)
                                      +..+||+||+|.... ...+..   ..| ++...|-.... ...+..  . . . ...... ..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~-~v~~~~~~~~~-~~~~~~--~-~-~-~~~~~~-~~  139 (396)
T cd03818          68 VLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAP-LIGYFEFYYRA-EGADVG--F-D-P-EFPPSL-DD  139 (396)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCC-EEEEEeeeecC-CCCCCC--C-C-C-CCCCch-hH
Confidence                            456899999997532 222222   345 55554421100 000000  0 0 0 000000 00


Q ss_pred             hhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEE
Q 044542          212 LQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMG  291 (465)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~  291 (465)
                      ..+...+.......++.+|.+|++|++.++.+.+.+   .+++.+||||+|.+.|.+.+......+...++.++. .+++
T Consensus       140 ~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~-~~i~  215 (396)
T cd03818         140 ALRLRNRNALILLALAQADAGVSPTRWQRSTFPAEL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGD-EVIT  215 (396)
T ss_pred             HHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhh---ccceEEeCCCccccccCCCchhhhcccccccCCCCC-eEEE
Confidence            011111111122568899999999999999887755   379999999999998877654333333333344444 6777


Q ss_pred             Eeec-cccccCHHHHHHHHHHhhhcCCCeEEEEEeCCc------------ch-hHHHHhc-----CCeEEcCCCChhHHH
Q 044542          292 VAGR-LVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGP------------WG-RRYAELG-----QNVKVLGALEAHQLS  352 (465)
Q Consensus       292 ~~Gr-l~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~------------~~-~~~~~l~-----~~V~~~g~v~~~~~~  352 (465)
                      |+|| +.+.||++.+++|++.+.++.|+++|+|+|++.            +. +.+++++     ++|+|+|+++++++.
T Consensus       216 ~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~  295 (396)
T cd03818         216 FVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYL  295 (396)
T ss_pred             EECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHH
Confidence            9997 999999999999999998888999999999732            11 1233332     689999999999999


Q ss_pred             HHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHH
Q 044542          353 EFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQR  431 (465)
Q Consensus       353 ~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~  431 (465)
                      .+|+.||++++||. .|++|++++||||||+|||+++.|+.. |++.++.+|+++++ |+++++++|.+++++ ++.+++
T Consensus       296 ~~l~~adv~v~~s~-~e~~~~~llEAmA~G~PVIas~~~g~~-e~i~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~  372 (396)
T cd03818         296 ALLQVSDVHVYLTY-PFVLSWSLLEAMACGCLVVGSDTAPVR-EVITDGENGLLVDFFDPDALAAAVIELLDD-PARRAR  372 (396)
T ss_pred             HHHHhCcEEEEcCc-ccccchHHHHHHHCCCCEEEcCCCCch-hhcccCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHH
Confidence            99999999999997 499999999999999999999999998 89999999999998 999999999999999 899999


Q ss_pred             HHHHHHHHHHhhCCHHHHHHHHHH
Q 044542          432 KGLACKEHALSMFTATKMASAYER  455 (465)
Q Consensus       432 ~~~~~~~~~~~~fs~~~~~~~~~~  455 (465)
                      |+++++++++++|||+.++++|++
T Consensus       373 l~~~ar~~~~~~fs~~~~~~~~~~  396 (396)
T cd03818         373 LRRAARRTALRYDLLSVCLPRQLA  396 (396)
T ss_pred             HHHHHHHHHHHhccHHHHHHHHhC
Confidence            999999999999999999998863

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=8.6e-40  Score=334.94  Aligned_cols=373  Identities=14%  Similarity=0.119  Sum_probs=264.6

Q ss_pred             CCCceeEEEEeC-CCC--------CCCCCChHHHHHHHHHHHHHhCC--cEEEEEeCCCCCCCC-------Cc-c-----
Q 044542           76 TFEKLKLAVFSK-TWP--------IGAAPGGMERHASTLYHALAARG--HEIHVFTAPSDRKPH-------ND-V-----  131 (465)
Q Consensus        76 ~~~~mkIl~v~~-~~p--------~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~-------~~-~-----  131 (465)
                      ..++|.|++|+. .++        -++..||...|+.+|+++|++.|  |+|+++|........       .+ +     
T Consensus       166 ~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~  245 (1050)
T TIGR02468       166 KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSS  245 (1050)
T ss_pred             ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccc
Confidence            456789999984 332        13577999999999999999998  899999987653210       00 0     


Q ss_pred             --------cCCcceEEEee-cCCC-------ccccC-----------CC--------------CCCcEEEecCCc--hhH
Q 044542          132 --------HQGNLHVHFAA-NDHG-------SVNLN-----------ND--------------GAFDYVHTESVS--LPH  168 (465)
Q Consensus       132 --------~~~~~~v~~~~-~~~~-------~~~~~-----------~~--------------~~~DiI~~~~~~--~~~  168 (465)
                              ...+..+..++ ....       .|.+.           .+              ..||+||+|.+.  ...
T Consensus       246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa  325 (1050)
T TIGR02468       246 ENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSA  325 (1050)
T ss_pred             ccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHH
Confidence                    11133332222 2211       12111           11              149999999762  222


Q ss_pred             H-h--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHH
Q 044542          169 W-R--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVK  245 (465)
Q Consensus       169 ~-~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~  245 (465)
                      + +  ..++| +|.+.|.......     ..+..... ....-....+....++..|...+..||.||+.|...++.+..
T Consensus       326 ~~L~~~lgVP-~V~T~HSLgr~K~-----~~ll~~g~-~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~  398 (1050)
T TIGR02468       326 ALLSGALNVP-MVLTGHSLGRDKL-----EQLLKQGR-MSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWG  398 (1050)
T ss_pred             HHHHHhhCCC-EEEECccchhhhh-----hhhccccc-ccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHH
Confidence            2 2  23679 9999997532111     00000000 000000011223344445668899999999999999987666


Q ss_pred             HhC-CC---------------------CCCEEEecCCCCCCCccCCcccCc-------------------ccccccCCCC
Q 044542          246 IYQ-LP---------------------QRNVHVILNGVDETKFVHDPEAGV-------------------RFPEKLGVPA  284 (465)
Q Consensus       246 ~~~-~~---------------------~~ki~vi~ngvd~~~~~~~~~~~~-------------------~~r~~~g~~~  284 (465)
                      .|+ .+                     ..++.|||||+|++.|.+......                   .++ ++..++
T Consensus       399 lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~-r~~~~p  477 (1050)
T TIGR02468       399 LYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIM-RFFTNP  477 (1050)
T ss_pred             HhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHH-hhcccC
Confidence            664 12                     349999999999999987432110                   111 122334


Q ss_pred             CCcEEEEEeeccccccCHHHHHHHHHHhhhc--CCCeEEEEEeCCcchh-----------HH----HHhc--CCeEEcCC
Q 044542          285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRD--HPGVYLLVAGTGPWGR-----------RY----AELG--QNVKVLGA  345 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~g~~~~-----------~~----~~l~--~~V~~~g~  345 (465)
                      +. .+|+++||+.+.||++.+++|+..+.+.  .+++. +|+|.++..+           .+    ++++  ++|.|.|+
T Consensus       478 dk-pvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~  555 (1050)
T TIGR02468       478 RK-PMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKH  555 (1050)
T ss_pred             CC-cEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCC
Confidence            44 5677999999999999999999998753  24665 4678764321           12    2222  88999999


Q ss_pred             CChhHHHHHHHhc----CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHH
Q 044542          346 LEAHQLSEFYNAL----DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALEL  420 (465)
Q Consensus       346 v~~~~~~~~~~~a----Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~  420 (465)
                      ++.+++..+|+.|    |++|+||.+ |+||++++||||||+|||+|+.||.. +++.++.+|+++++ |+++|+++|.+
T Consensus       556 v~~edvp~lYr~Ad~s~DVFV~PS~~-EgFGLvlLEAMAcGlPVVASdvGG~~-EII~~g~nGlLVdP~D~eaLA~AL~~  633 (1050)
T TIGR02468       556 HKQSDVPDIYRLAAKTKGVFINPAFI-EPFGLTLIEAAAHGLPMVATKNGGPV-DIHRVLDNGLLVDPHDQQAIADALLK  633 (1050)
T ss_pred             CCHHHHHHHHHHhhhcCCeeeCCccc-CCCCHHHHHHHHhCCCEEEeCCCCcH-HHhccCCcEEEECCCCHHHHHHHHHH
Confidence            9999999999988    699999986 99999999999999999999999998 89999999999999 99999999999


Q ss_pred             HHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542          421 VIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       421 ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      ++.+ ++.+++|++++++.+++ |+|+.++++|++.+..+..
T Consensus       634 LL~D-pelr~~m~~~gr~~v~~-FSWe~ia~~yl~~i~~~~~  673 (1050)
T TIGR02468       634 LVAD-KQLWAECRQNGLKNIHL-FSWPEHCKTYLSRIASCRP  673 (1050)
T ss_pred             HhhC-HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHhc
Confidence            9998 89999999999999865 9999999999999987653

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK10125 putative glycosyl transferase; Provisional

Probab=100.00  E-value=9.5e-40  Score=316.44  Aligned_cols=353  Identities=17%  Similarity=0.126  Sum_probs=242.4

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC--------------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH--------------  145 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~--------------  145 (465)
                      ||||+|...+    ..||+|+.+.+|++.|.++||+|.++..........+.......+.......              
T Consensus         1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (405)
T PRK10125          1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNR   76 (405)
T ss_pred             CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcch
Confidence            8999999864    7799999999999999999999999998865544332222211111111000              


Q ss_pred             -Cc------cccC-CCCCCcEEEecCCc-----hhH---------HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCC-
Q 044542          146 -GS------VNLN-NDGAFDYVHTESVS-----LPH---------WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQN-  202 (465)
Q Consensus       146 -~~------~~~~-~~~~~DiI~~~~~~-----~~~---------~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~-  202 (465)
                       +.      .+.. +..+|||||+|...     +..         ....++| +|+|+||+|..+.+..+...+.+... 
T Consensus        77 ~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~p-iV~TlHd~~~~tg~c~~~~~C~~~~~~  155 (405)
T PRK10125         77 DLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVT-LVWTLHDHWSVTGRCAFTDGCEGWKTG  155 (405)
T ss_pred             hhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCC-EEEecccccccCCCcCCCccccccccc
Confidence             00      0111 57799999999642     211         1112457 99999999977655554333322111 


Q ss_pred             -CCCCC---c-------hhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc
Q 044542          203 -GVLPG---S-------MTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE  271 (465)
Q Consensus       203 -~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~  271 (465)
                       ...+.   +       .........+..  ...++.++.+|++|+++++.+.+.++  ..++.+||||+|++.+.+.+.
T Consensus       156 c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~--~~~~~~~~~iV~~S~~l~~~~~~~~~--~~~i~vI~NGid~~~~~~~~~  231 (405)
T PRK10125        156 CQKCPTLNNYPPVKVDRAHQLVAGKRQLF--REMLALGCQFISPSQHVADAFNSLYG--PGRCRIINNGIDMATEAILAE  231 (405)
T ss_pred             CCCCCCccCCCCCccchHHHHHHHHHHHH--HHHhhcCcEEEEcCHHHHHHHHHHcC--CCCEEEeCCCcCccccccccc
Confidence             11111   1       111111111111  13345678999999999999887655  479999999999754322211


Q ss_pred             cCcccccccCCCCCCcEEEEEeecc--ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCC-Ch
Q 044542          272 AGVRFPEKLGVPANVSLVMGVAGRL--VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGAL-EA  348 (465)
Q Consensus       272 ~~~~~r~~~g~~~~~~~~l~~~Grl--~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v-~~  348 (465)
                      . ...+.    ++++ .+++++|+.  .+.||++.+++|+..+.   ++++|+++|.|+...     .++|.++|+. +.
T Consensus       232 ~-~~~~~----~~~~-~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~~~~-----~~~v~~~g~~~~~  297 (405)
T PRK10125        232 L-PPVRE----TQGK-PKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFSPFT-----AGNVVNHGFETDK  297 (405)
T ss_pred             c-ccccc----CCCC-CEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCCccc-----ccceEEecCcCCH
Confidence            1 11111    2233 567789984  36899999999999873   479999999875422     3678999987 56


Q ss_pred             hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChH
Q 044542          349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPK  427 (465)
Q Consensus       349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~  427 (465)
                      +++.++|++||++|+||.+ ||||++++||||||+|||+|++||++ |++.++ +|+++++ |+++|++.+...+.+ . 
T Consensus       298 ~~l~~~y~~aDvfV~pS~~-Egfp~vilEAmA~G~PVVat~~gG~~-Eiv~~~-~G~lv~~~d~~~La~~~~~~~~~-~-  372 (405)
T PRK10125        298 RKLMSALNQMDALVFSSRV-DNYPLILCEALSIGVPVIATHSDAAR-EVLQKS-GGKTVSEEEVLQLAQLSKPEIAQ-A-  372 (405)
T ss_pred             HHHHHHHHhCCEEEECCcc-ccCcCHHHHHHHcCCCEEEeCCCChH-HhEeCC-cEEEECCCCHHHHHhccCHHHHH-H-
Confidence            7899999999999999986 99999999999999999999999998 777664 8999999 999999864322221 1 


Q ss_pred             HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          428 VLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       428 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      ...++.+++++++.+.||++.++++|+++|+++
T Consensus       373 ~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l  405 (405)
T PRK10125        373 VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL  405 (405)
T ss_pred             hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence            011123568888889999999999999999864

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-39  Score=314.44  Aligned_cols=347  Identities=23%  Similarity=0.270  Sum_probs=263.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYV  159 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI  159 (465)
                      |||++++..    ...||.++++..++++|.++||+|++++....                     .........+||+|
T Consensus         1 MkIl~~~~~----~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~---------------------~~~~~~~~~~~dii   55 (365)
T cd03825           1 MKVLHLNTS----DISGGAARAAYRLHRALQAAGVDSTMLVQEKK---------------------ALISKIEIINADIV   55 (365)
T ss_pred             CeEEEEecC----CCCCcHHHHHHHHHHHHHhcCCceeEEEeecc---------------------hhhhChhcccCCEE
Confidence            899999875    36699999999999999999999999997754                     11222257789999


Q ss_pred             EecCCc-----hhHHhh--hcCCcEEEEecchhHHHHhhhhhhhhhh---cCC--CCCCCchh-hhhhhhHHHHHHHHhh
Q 044542          160 HTESVS-----LPHWRA--KMVPNVAVTWHGIWYEVMHSKLFGELFS---NQN--GVLPGSMT-ELQEAMPRLVDEIRFF  226 (465)
Q Consensus       160 ~~~~~~-----~~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~-~~~~~~~~~~~~~~~~  226 (465)
                      |+|...     ...+..  .++| .++++|+.+..............   ...  +....... .+.....+... ....
T Consensus        56 h~~~~~~~~~~~~~~~~~~~~~~-~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  133 (365)
T cd03825          56 HLHWIHGGFLSIEDLSKLLDRKP-VVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKR-KAWA  133 (365)
T ss_pred             EEEccccCccCHHHHHHHHcCCC-EEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHH-HHhc
Confidence            998632     111112  2677 99999997654332111111000   000  00000000 11111111111 0122


Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecccc--ccCHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVR--DKGHPL  304 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~--~Kg~~~  304 (465)
                      ..++.++++|++.++.+.+.++++..++.++|||+|.+.+.+..  ....++.++++.+. .++++.|+...  .||++.
T Consensus       134 ~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~--~~~~~~~~~~~~~~-~~i~~~~~~~~~~~K~~~~  210 (365)
T cd03825         134 DLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRD--KREARKRLGLPADK-KIILFGAVGGTDPRKGFDE  210 (365)
T ss_pred             cCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCc--HHHHHHHhCCCCCC-eEEEEEecCCCccccCHHH
Confidence            56778999999999999887667889999999999998775533  23456777777665 55556666654  899999


Q ss_pred             HHHHHHHhhhc-CCCeEEEEEeCCcchhHHHHhcCCeEEcCCCC-hhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcC
Q 044542          305 LYEAFSSITRD-HPGVYLLVAGTGPWGRRYAELGQNVKVLGALE-AHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG  382 (465)
Q Consensus       305 ll~a~~~l~~~-~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~-~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G  382 (465)
                      +++|++.+.++ .++++++++|+++..... .+..+|.++|+++ ++++..+|+.||++++||.. |++|++++|||++|
T Consensus       211 ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~-e~~g~~~~Eam~~g  288 (365)
T cd03825         211 LIEALKRLAERWKDDIELVVFGASDPEIPP-DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQ-ENFPNTAIEALACG  288 (365)
T ss_pred             HHHHHHHhhhccCCCeEEEEeCCCchhhhc-cCCCceEecCCcCCHHHHHHHHHhCCEEEecccc-ccccHHHHHHHhcC
Confidence            99999998775 578999999987654432 3458899999998 78999999999999999975 99999999999999


Q ss_pred             CeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          383 RTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       383 ~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      +|||+++.++.. +++.++.+|++++. |+++++++|.+++++ ++.+.++++++++.++++|||+.++++|.++|+++
T Consensus       289 ~PvI~~~~~~~~-e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~  365 (365)
T cd03825         289 TPVVAFDVGGIP-DIVDHGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL  365 (365)
T ss_pred             CCEEEecCCCCh-hheeCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence            999999999998 88888889999998 999999999999998 88899999999999999999999999999999864

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=7.8e-40  Score=330.08  Aligned_cols=350  Identities=16%  Similarity=0.142  Sum_probs=250.1

Q ss_pred             Cce-eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc--------------EEEEEeCCCCCC---CCCcccCCcceEE
Q 044542           78 EKL-KLAVFSKTWPIGAAPGGMERHASTLYHALAARGH--------------EIHVFTAPSDRK---PHNDVHQGNLHVH  139 (465)
Q Consensus        78 ~~m-kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--------------~V~v~~~~~~~~---~~~~~~~~~~~v~  139 (465)
                      ++. ||+++.+..    ..||+|+++.+|+.+|.+.++              +|.+++......   ....+...+..+.
T Consensus       279 ~~~~rIl~vi~sl----~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~  354 (694)
T PRK15179        279 SFVGPVLMINGSL----GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVS  354 (694)
T ss_pred             CCcceEEEEeCCC----CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEE
Confidence            345 899999874    679999999999999999854              454443322111   1112333444454


Q ss_pred             EeecCCCc--c----------------------------ccCCCCCCcEEEecCCch--hHHh---hhcCCcEEEEecch
Q 044542          140 FAANDHGS--V----------------------------NLNNDGAFDYVHTESVSL--PHWR---AKMVPNVAVTWHGI  184 (465)
Q Consensus       140 ~~~~~~~~--~----------------------------~~~~~~~~DiI~~~~~~~--~~~~---~~~~p~~v~~~h~~  184 (465)
                      ........  .                            ...++.+|||||+|....  ...+   ..++|.++.+.|+.
T Consensus       355 ~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~  434 (694)
T PRK15179        355 VYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTM  434 (694)
T ss_pred             EeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCC
Confidence            44332110  0                            011677899999997532  2122   23567334466764


Q ss_pred             hHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCC
Q 044542          185 WYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDET  264 (465)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~  264 (465)
                      ..... ...               ....+..+.+.+    .....+.++++|+..++.+.+.++++.+++.|||||+|..
T Consensus       435 ~~~~~-~~~---------------~~~~~~~l~~~l----~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~  494 (694)
T PRK15179        435 PPVDR-PDR---------------YRVEYDIIYSEL----LKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPL  494 (694)
T ss_pred             ccccc-hhH---------------HHHHHHHHHHHH----HhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHH
Confidence            32100 000               001111111111    1123456677788888888887899999999999999988


Q ss_pred             CccCCcccCcccccc--cCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c-
Q 044542          265 KFVHDPEAGVRFPEK--LGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G-  337 (465)
Q Consensus       265 ~~~~~~~~~~~~r~~--~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~-  337 (465)
                      .|.+.+.... .+.+  ...+ ++.++|+++||+.+.||++.+++|++++.+++|+++|+|+|+|+..+.++++    + 
T Consensus       495 ~f~~~~~~~~-~~~~~~~~~~-~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL  572 (694)
T PRK15179        495 KSVQDDACTA-MMAQFDARTS-DARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGM  572 (694)
T ss_pred             hcCCCchhhH-HHHhhccccC-CCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCC
Confidence            7764332111 1111  1123 3337888999999999999999999999888899999999999877666543    3 


Q ss_pred             -CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-C--HHH
Q 044542          338 -QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-N--VKS  413 (465)
Q Consensus       338 -~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d--~~~  413 (465)
                       ++|+|+|+.  +++..+|+.+|++++||.+ ||||++++|||+||+|||+|+.||.+ |++.++.+|+++++ |  +++
T Consensus       573 ~~~V~flG~~--~dv~~ll~aaDv~VlpS~~-Egfp~vlLEAMA~G~PVVat~~gG~~-EiV~dg~~GlLv~~~d~~~~~  648 (694)
T PRK15179        573 GERILFTGLS--RRVGYWLTQFNAFLLLSRF-EGLPNVLIEAQFSGVPVVTTLAGGAG-EAVQEGVTGLTLPADTVTAPD  648 (694)
T ss_pred             CCcEEEcCCc--chHHHHHHhcCEEEecccc-ccchHHHHHHHHcCCeEEEECCCChH-HHccCCCCEEEeCCCCCChHH
Confidence             899999997  5899999999999999976 99999999999999999999999998 89999999999986 5  569


Q ss_pred             HHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          414 FVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       414 la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      ++++|.+++.+ ......++++++++++++|||+.+++++.++|+
T Consensus       649 La~aL~~ll~~-l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~  692 (694)
T PRK15179        649 VAEALARIHDM-CAADPGIARKAADWASARFSLNQMIASTVRCYQ  692 (694)
T ss_pred             HHHHHHHHHhC-hhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            99999998887 555567889999999999999999999999995

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.1e-39  Score=317.82  Aligned_cols=341  Identities=24%  Similarity=0.284  Sum_probs=254.0

Q ss_pred             CCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cccCCcceEEEeecCCC-------cccc-----------CCC
Q 044542           93 AAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DVHQGNLHVHFAANDHG-------SVNL-----------NND  153 (465)
Q Consensus        93 ~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~-------~~~~-----------~~~  153 (465)
                      +..||+++++.+++++|++.||+|+|++......... ........+........       .+..           .+.
T Consensus        18 ~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (398)
T cd03800          18 ADTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRR   97 (398)
T ss_pred             CCCCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999765433221 11122222322221110       0100           033


Q ss_pred             C--CCcEEEecCCch--hHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhh
Q 044542          154 G--AFDYVHTESVSL--PHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF  226 (465)
Q Consensus       154 ~--~~DiI~~~~~~~--~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (465)
                      .  +||+||+|....  ...   ...++| ++.+.|+......     ...      ..    ............+...+
T Consensus        98 ~~~~~Div~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~-----~~~------~~----~~~~~~~~~~~~~~~~~  161 (398)
T cd03800          98 EGGRPDLIHAHYWDSGLVALLLARRLGIP-LVHTFHSLGAVKR-----RHL------GA----ADTYEPARRIEAEERLL  161 (398)
T ss_pred             cCCCccEEEEecCccchHHHHHHhhcCCc-eEEEeecccccCC-----ccc------cc----ccccchhhhhhHHHHHH
Confidence            3  899999986421  111   123557 8889997532100     000      00    00001111222344678


Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY  306 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll  306 (465)
                      +.+|.++++|+..++.+.+.++.+..++.+||||+|.+.+.+..... ..++.++.+.+. ++++++||+.+.||++.++
T Consensus       162 ~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~-~~~~~~~~~~~~-~~i~~~gr~~~~k~~~~ll  239 (398)
T cd03800         162 RAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAE-ARRARLLRDPDK-PRILAVGRLDPRKGIDTLI  239 (398)
T ss_pred             hhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchh-hHHHhhccCCCC-cEEEEEcccccccCHHHHH
Confidence            89999999999999999987776667799999999988776543321 114444555444 7788999999999999999


Q ss_pred             HHHHHhhhcCCCeEEEEEeCCcch------h----HHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHH
Q 044542          307 EAFSSITRDHPGVYLLVAGTGPWG------R----RYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLT  374 (465)
Q Consensus       307 ~a~~~l~~~~~~~~l~ivG~g~~~------~----~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~  374 (465)
                      +|+..+.+++++++|+++|++...      .    ..++++  ++|.|+|+++.+++..+|+.||++++||.. |++|++
T Consensus       240 ~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~-e~~~~~  318 (398)
T cd03800         240 RAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALY-EPFGLT  318 (398)
T ss_pred             HHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccc-cccCcH
Confidence            999999888889999999986542      1    112222  789999999999999999999999999976 999999


Q ss_pred             HHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542          375 LIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY  453 (465)
Q Consensus       375 ~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  453 (465)
                      ++|||++|+|||+++.++.. +++.++++|+++++ |+++++++|.+++++ ++.+++++++++++++++|||+.++++|
T Consensus       319 l~Ea~a~G~Pvi~s~~~~~~-e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~  396 (398)
T cd03800         319 ALEAMACGLPVVATAVGGPR-DIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARL  396 (398)
T ss_pred             HHHHHhcCCCEEECCCCCHH-HHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            99999999999999999998 88899999999998 999999999999998 8999999999999998999999999998


Q ss_pred             H
Q 044542          454 E  454 (465)
Q Consensus       454 ~  454 (465)
                      +
T Consensus       397 ~  397 (398)
T cd03800         397 L  397 (398)
T ss_pred             h
Confidence            6

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=3.3e-39  Score=315.26  Aligned_cols=352  Identities=16%  Similarity=0.196  Sum_probs=254.6

Q ss_pred             EEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc---ccCCcceEEEeecCC-------------
Q 044542           82 LAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND---VHQGNLHVHFAANDH-------------  145 (465)
Q Consensus        82 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---~~~~~~~v~~~~~~~-------------  145 (465)
                      ||++++.+|.++..|| ...+++++++|++. |+|++++..........   +......+...+...             
T Consensus         1 iL~~~~~~P~P~~~G~-~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (397)
T TIGR03087         1 ILYLVHRIPYPPNKGD-KIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLT   78 (397)
T ss_pred             CeeecCCCCCCCCCCC-cEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcC
Confidence            6899999988666555 88899999999886 99999998754332211   111111111111100             


Q ss_pred             ---CccccC-------------CCCCCcEEEecCCchhHHhh---hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCC
Q 044542          146 ---GSVNLN-------------NDGAFDYVHTESVSLPHWRA---KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLP  206 (465)
Q Consensus       146 ---~~~~~~-------------~~~~~DiI~~~~~~~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~  206 (465)
                         ....+.             ++.++|+||+++..+..++.   .++| .+++.|+.....+.     .......    
T Consensus        79 ~~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~p-~i~~~~d~~~~~~~-----~~~~~~~----  148 (397)
T TIGR03087        79 GEPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYVTPHVRGVP-RIVDFVDVDSDKWL-----QYARTKR----  148 (397)
T ss_pred             CCCCcchhhCCHHHHHHHHHHHhhCCCCEEEEeccccceeccccccCCC-eEeehhhHHHHHHH-----HHHhccC----
Confidence               000000             55799999999865544433   3567 88899986543221     1111100    


Q ss_pred             CchhhhhhhhHH--HHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCC
Q 044542          207 GSMTELQEAMPR--LVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPA  284 (465)
Q Consensus       207 ~~~~~~~~~~~~--~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~  284 (465)
                      ...++++....+  ...|+..++++|.++++|+..++.+.+.++....++.+||||+|.+.|.+......      ..+.
T Consensus       149 ~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~------~~~~  222 (397)
T TIGR03087       149 WPLRWIYRREGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPN------PYPP  222 (397)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccC------CCCC
Confidence            001122211111  12355788999999999999999998865556789999999999988865432111      1122


Q ss_pred             CCcEEEEEeeccccccCHHHHH----HHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--CCeEEcCCCChhHHHHHHHhc
Q 044542          285 NVSLVMGVAGRLVRDKGHPLLY----EAFSSITRDHPGVYLLVAGTGPWGRRYAELG--QNVKVLGALEAHQLSEFYNAL  358 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~~ll----~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--~~V~~~g~v~~~~~~~~~~~a  358 (465)
                      +. .+++|+|++.+.||++.++    +++..+.++.|+++|+|+|+|+.. .++++.  ++|+|+|+++  ++..+|+.|
T Consensus       223 ~~-~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~~-~~~~l~~~~~V~~~G~v~--~~~~~~~~a  298 (397)
T TIGR03087       223 GK-RVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPSP-AVRALAALPGVTVTGSVA--DVRPYLAHA  298 (397)
T ss_pred             CC-cEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCChH-HHHHhccCCCeEEeeecC--CHHHHHHhC
Confidence            33 5677999999999999887    556667777799999999998764 455554  7899999995  789999999


Q ss_pred             CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHH
Q 044542          359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKE  438 (465)
Q Consensus       359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~  438 (465)
                      |++|+||...||+|++++|||+||+|||+|+.++.  .+...+++|++++.|+++++++|.+++++ ++.+++|++++++
T Consensus       299 dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~--~i~~~~~~g~lv~~~~~~la~ai~~ll~~-~~~~~~~~~~ar~  375 (397)
T TIGR03087       299 AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE--GIDALPGAELLVAADPADFAAAILALLAN-PAEREELGQAARR  375 (397)
T ss_pred             CEEEecccccCCcccHHHHHHHcCCCEEecCcccc--cccccCCcceEeCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHH
Confidence            99999997569999999999999999999997542  33444567888866999999999999998 8899999999999


Q ss_pred             HHHhhCCHHHHHHHHHHHHH
Q 044542          439 HALSMFTATKMASAYERFFL  458 (465)
Q Consensus       439 ~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +++++|||+.+++++.++|+
T Consensus       376 ~v~~~fsw~~~~~~~~~~l~  395 (397)
T TIGR03087       376 RVLQHYHWPRNLARLDALLE  395 (397)
T ss_pred             HHHHhCCHHHHHHHHHHHhc
Confidence            99999999999999999985

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2e-39  Score=324.75  Aligned_cols=368  Identities=20%  Similarity=0.230  Sum_probs=258.4

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-------------------------ccCCc
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-------------------------VHQGN  135 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-------------------------~~~~~  135 (465)
                      ||++++.++.+....||.+.++..|+++|++.||+|+|+++.........                         ....+
T Consensus         1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   80 (476)
T cd03791           1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG   80 (476)
T ss_pred             CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence            69999998654468999999999999999999999999998765432210                         01122


Q ss_pred             ceEEEeecCC---Cc-------cccC-------------------CCCCCcEEEecCCch---hHHhh--------hcCC
Q 044542          136 LHVHFAANDH---GS-------VNLN-------------------NDGAFDYVHTESVSL---PHWRA--------KMVP  175 (465)
Q Consensus       136 ~~v~~~~~~~---~~-------~~~~-------------------~~~~~DiI~~~~~~~---~~~~~--------~~~p  175 (465)
                      ..+.+.....   ..       ..+.                   ...+|||||+|.+..   +..+.        .+.|
T Consensus        81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~  160 (476)
T cd03791          81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIK  160 (476)
T ss_pred             ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCC
Confidence            3333332211   00       0000                   247999999998631   22222        1456


Q ss_pred             cEEEEecchhHHHHhh-hhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHH---------
Q 044542          176 NVAVTWHGIWYEVMHS-KLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVK---------  245 (465)
Q Consensus       176 ~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~---------  245 (465)
                       +++++|+..+..... ........   ...................++..+..+|.++++|+..++.+.+         
T Consensus       161 -~v~tiH~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~  236 (476)
T cd03791         161 -TVFTIHNLAYQGVFPLEALEDLGL---PWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDG  236 (476)
T ss_pred             -EEEEeCCCCCCCCCCHHHHHHcCC---CccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHH
Confidence             999999975321100 00000000   0000000000000001111235678999999999999988763         


Q ss_pred             HhCCCCCCEEEecCCCCCCCccCCccc-----------------CcccccccCCC-CCCcEEEEEeeccccccCHHHHHH
Q 044542          246 IYQLPQRNVHVILNGVDETKFVHDPEA-----------------GVRFPEKLGVP-ANVSLVMGVAGRLVRDKGHPLLYE  307 (465)
Q Consensus       246 ~~~~~~~ki~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~-~~~~~~l~~~Grl~~~Kg~~~ll~  307 (465)
                      .+.....++.+|+||+|.+.|.+....                 +..+++++|++ +++.++++++||+.++||++.+++
T Consensus       237 ~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~  316 (476)
T cd03791         237 LLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLE  316 (476)
T ss_pred             HHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHH
Confidence            223346899999999999988775432                 23467888886 233477889999999999999999


Q ss_pred             HHHHhhhcCCCeEEEEEeCCcc--hhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHc
Q 044542          308 AFSSITRDHPGVYLLVAGTGPW--GRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHC  381 (465)
Q Consensus       308 a~~~l~~~~~~~~l~ivG~g~~--~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~  381 (465)
                      |+..+.++  +++|+++|+|+.  .+.++++    .+++.+.+..+.+++..+|+.||++++||.+ |+||++++|||+|
T Consensus       317 a~~~l~~~--~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~-E~~gl~~lEAma~  393 (476)
T cd03791         317 ALPELLEL--GGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRF-EPCGLTQMYAMRY  393 (476)
T ss_pred             HHHHHHHc--CcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCC-CCCcHHHHHHhhC
Confidence            99999875  489999998853  2344433    3688877666778888999999999999986 9999999999999


Q ss_pred             CCeEEecCCCCcceeeeeeCC------ceEEeCC-CHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          382 GRTVLTPNYPSIVRTVVVNEE------LGYTFSP-NVKSFVEALELVIRD--GPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       382 G~PvI~s~~gg~~~e~v~~~~------~G~l~~~-d~~~la~~i~~ll~~--~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      |+|||+++.||.. |++.++.      +|+++++ |+++++++|.++++.  .++.+.++++++.   ++.|||+.++++
T Consensus       394 G~pvI~~~~gg~~-e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~  469 (476)
T cd03791         394 GTVPIVRATGGLA-DTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAM---AQDFSWDRSAKE  469 (476)
T ss_pred             CCCCEECcCCCcc-ceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHh---ccCCChHHHHHH
Confidence            9999999999998 8888887      9999999 999999999998862  2566666666654   456999999999


Q ss_pred             HHHHHHH
Q 044542          453 YERFFLR  459 (465)
Q Consensus       453 ~~~~~~~  459 (465)
                      |+++|++
T Consensus       470 ~~~~y~~  476 (476)
T cd03791         470 YLELYRS  476 (476)
T ss_pred             HHHHHhC
Confidence            9999963

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=4.2e-39  Score=311.22  Aligned_cols=336  Identities=21%  Similarity=0.319  Sum_probs=255.8

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCcc----------cc
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSV----------NL  150 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~~  150 (465)
                      ||+++++.+    ..||+++.+.+++++|.+.||+|++++.......... . ..............+          ..
T Consensus         1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (360)
T cd04951           1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPP-I-DATIILNLNMSKNPLSFLLALWKLRKI   74 (360)
T ss_pred             CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccch-h-hccceEEecccccchhhHHHHHHHHHH
Confidence            588888764    6799999999999999999999999987553322111 1 111111111111111          11


Q ss_pred             CCCCCCcEEEecCCch--hHHh----hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHH
Q 044542          151 NNDGAFDYVHTESVSL--PHWR----AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIR  224 (465)
Q Consensus       151 ~~~~~~DiI~~~~~~~--~~~~----~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (465)
                      .++.+||+||+|....  ...+    ....+ ++.+.|+....                      ........+     .
T Consensus        75 ~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~-~v~~~h~~~~~----------------------~~~~~~~~~-----~  126 (360)
T cd04951          75 LRQFKPDVVHAHMFHANIFARLLRLFLPSPP-LICTAHSKNEG----------------------GRLRMLAYR-----L  126 (360)
T ss_pred             HHhcCCCEEEEcccchHHHHHHHHhhCCCCc-EEEEeeccCch----------------------hHHHHHHHH-----H
Confidence            1577999999997532  1111    12334 88888875311                      011111111     2


Q ss_pred             hhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHH
Q 044542          225 FFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPL  304 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~  304 (465)
                      ....++.++++|+...+.+.+..+++.+++.++|||+|...+.+.......+++++++++++ ++++++|++.+.||++.
T Consensus       127 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~kg~~~  205 (360)
T cd04951         127 TDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDT-FVILAVGRLVEAKDYPN  205 (360)
T ss_pred             HhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCC-EEEEEEeeCchhcCcHH
Confidence            22446778899999999998876677899999999999888766554445577778887665 77889999999999999


Q ss_pred             HHHHHHHhhhcCCCeEEEEEeCCcchhHHHH----hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHH
Q 044542          305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYAE----LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA  378 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~----l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EA  378 (465)
                      +++|+.++.+++|+++|+|+|+|+..+.+++    ++  ++|.++|++  +++..+|+.||++++||.. ||+|++++||
T Consensus       206 li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~-e~~~~~~~Ea  282 (360)
T cd04951         206 LLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAW-EGFGLVVAEA  282 (360)
T ss_pred             HHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccc-cCCChHHHHH
Confidence            9999999988888999999999987765544    22  689999987  6899999999999999986 9999999999


Q ss_pred             HHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          379 MHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       379 ma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      |++|+|||+++.|+.. +++.+  +|+++++ |+++++++|.++++++++.++.++++ ++.+.++|||+.++++|.++|
T Consensus       283 ~a~G~PvI~~~~~~~~-e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y  358 (360)
T cd04951         283 MACELPVVATDAGGVR-EVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY  358 (360)
T ss_pred             HHcCCCEEEecCCChh-hEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence            9999999999999998 77765  7889988 99999999999996646777777666 888888999999999999999


Q ss_pred             H
Q 044542          458 L  458 (465)
Q Consensus       458 ~  458 (465)
                      +
T Consensus       359 ~  359 (360)
T cd04951         359 T  359 (360)
T ss_pred             h
Confidence            6

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=2.2e-38  Score=318.76  Aligned_cols=365  Identities=15%  Similarity=0.142  Sum_probs=251.2

Q ss_pred             CceeEEEEeCCC----C---CCCCCChHHHHHHHHHHHH--------HhCCc----EEEEEeCCCCCCCCC------ccc
Q 044542           78 EKLKLAVFSKTW----P---IGAAPGGMERHASTLYHAL--------AARGH----EIHVFTAPSDRKPHN------DVH  132 (465)
Q Consensus        78 ~~mkIl~v~~~~----p---~~~~~gG~~~~~~~l~~~L--------~~~G~----~V~v~~~~~~~~~~~------~~~  132 (465)
                      ..|||++++...    +   ..+..||...++.+++++|        +++||    +|+|+|....+....      +..
T Consensus       254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~  333 (784)
T TIGR02470       254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKV  333 (784)
T ss_pred             ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccc
Confidence            358999999754    2   1234699999999999985        68899    788999876543221      111


Q ss_pred             C--CcceEEEeecCC-C------------ccccC--------------CCCCCcEEEecCCc--hhHH-hh--hcCCcEE
Q 044542          133 Q--GNLHVHFAANDH-G------------SVNLN--------------NDGAFDYVHTESVS--LPHW-RA--KMVPNVA  178 (465)
Q Consensus       133 ~--~~~~v~~~~~~~-~------------~~~~~--------------~~~~~DiI~~~~~~--~~~~-~~--~~~p~~v  178 (465)
                      .  .+..+...+..+ .            .|.+.              ...+||+||+|.+.  +.+. ++  .++| .+
T Consensus       334 ~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP-~v  412 (784)
T TIGR02470       334 YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVT-QC  412 (784)
T ss_pred             cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCC-EE
Confidence            1  222222222111 1            01111              24579999999863  2222 22  3678 89


Q ss_pred             EEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHH----HHHH---------
Q 044542          179 VTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAE----VLVK---------  245 (465)
Q Consensus       179 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~----~~~~---------  245 (465)
                      .+.|........         ... ....-....+....++..+...+..||.||+.|.....    .+.+         
T Consensus       413 ~t~HsL~~~K~~---------~~g-~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~  482 (784)
T TIGR02470       413 TIAHALEKTKYP---------DSD-IYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTM  482 (784)
T ss_pred             EECCcchhhccc---------ccc-cccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccc
Confidence            999976322100         000 00000001111222333355778899999999975433    2211         


Q ss_pred             --Hh----CC--CCCCEEEecCCCCCCCccCCcccCc-----------------ccccccCC--CCCCcEEEEEeecccc
Q 044542          246 --IY----QL--PQRNVHVILNGVDETKFVHDPEAGV-----------------RFPEKLGV--PANVSLVMGVAGRLVR  298 (465)
Q Consensus       246 --~~----~~--~~~ki~vi~ngvd~~~~~~~~~~~~-----------------~~r~~~g~--~~~~~~~l~~~Grl~~  298 (465)
                        .|    |+  +..|+.+||+|+|.+.|.+......                 ..++.+|+  +.++ .+|+++||+.+
T Consensus       483 p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~k-piIl~VGRL~~  561 (784)
T TIGR02470       483 PGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNK-PIIFSMARLDR  561 (784)
T ss_pred             cceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCC-cEEEEEeCCCc
Confidence              12    22  5679999999999998876433211                 11355665  3344 56779999999


Q ss_pred             ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcc-------h--hHHH-------Hhc--CCeEEcCCC-ChhHHHHHHH---
Q 044542          299 DKGHPLLYEAFSSITRDHPGVYLLVAGTGPW-------G--RRYA-------ELG--QNVKVLGAL-EAHQLSEFYN---  356 (465)
Q Consensus       299 ~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-------~--~~~~-------~l~--~~V~~~g~v-~~~~~~~~~~---  356 (465)
                      .||++.+++|+.++.+..++++|+|+|++..       .  +.++       +++  ++|.|+|.. +..+..++|+   
T Consensus       562 ~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iA  641 (784)
T TIGR02470       562 VKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIA  641 (784)
T ss_pred             cCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhh
Confidence            9999999999988765556789999997642       1  1122       222  799999985 5566666664   


Q ss_pred             -hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHH----hCChHHHH
Q 044542          357 -ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVI----RDGPKVLQ  430 (465)
Q Consensus       357 -~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll----~~~~~~~~  430 (465)
                       .+|++++||.+ |+||++++|||+||+|||+|+.||.+ |++.++.+|+++++ |+++++++|.+++    .+ ++.++
T Consensus       642 d~adVfV~PS~~-EpFGLvvLEAMAcGlPVVAT~~GG~~-EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~d-p~~~~  718 (784)
T TIGR02470       642 DTKGIFVQPALY-EAFGLTVLEAMTCGLPTFATRFGGPL-EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDED-PSYWQ  718 (784)
T ss_pred             ccCcEEEECCcc-cCCCHHHHHHHHcCCCEEEcCCCCHH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC-HHHHH
Confidence             35799999976 99999999999999999999999998 99999999999999 9999999999886    46 89999


Q ss_pred             HHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          431 RKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       431 ~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      ++++++++++.++|||+.++++++++.
T Consensus       719 ~ms~~a~~rV~~~FSW~~~A~~ll~l~  745 (784)
T TIGR02470       719 KISQGGLQRIYEKYTWKIYSERLLTLA  745 (784)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            999999999999999999999998875

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-38  Score=317.38  Aligned_cols=352  Identities=19%  Similarity=0.255  Sum_probs=264.4

Q ss_pred             eEEEEeC-CCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCC--CCCcccCCcceEEEeecCC------------
Q 044542           81 KLAVFSK-TWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRK--PHNDVHQGNLHVHFAANDH------------  145 (465)
Q Consensus        81 kIl~v~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--~~~~~~~~~~~v~~~~~~~------------  145 (465)
                      +|++++. .||.  ..||....+.+|+++|.+.-+.|..++......  ...++..+...+.......            
T Consensus         1 ~v~l~~egtyp~--~~ggvs~w~~~~i~~~p~~~f~~~~~~~~~~~~~~~~y~~p~nv~~~~~~~l~~~~~~~~~~~~~~   78 (475)
T cd03813           1 DVCLVLEGTYPY--VRGGVSSWVHQLITGLPEHTFAVVFIGADPEDYGEFKYELPPNVVHVEEVPLWSELPPPNRLSDSA   78 (475)
T ss_pred             CeEEEEecCCCC--cCCchhHHHHHHHhhCCCceEEEEEEecCccccCCccccCCCCcceEEEEEccCcccccccccchh
Confidence            4788875 6775  889999999999999999888888888776554  2334544444443332110            


Q ss_pred             -------------C-------------------------cc-----ccC-------------------------------
Q 044542          146 -------------G-------------------------SV-----NLN-------------------------------  151 (465)
Q Consensus       146 -------------~-------------------------~~-----~~~-------------------------------  151 (465)
                                   .                         ..     ...                               
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (475)
T cd03813          79 GKAILRALLREVLLLFLTTFLPIIELEDLALELLRELLGKNEGSLTDFLYSKEFWEMLTELYREYCTDPSFVDYFWTVRN  158 (475)
T ss_pred             hHHHHHHHHHHHhhhccccccccccchHHHHHHHHHhcccccccHHHHhcCHHHHHHHHHHHHccCCCCCHHHHHHHHHH
Confidence                         0                         00     000                               


Q ss_pred             -----------CCCCCcEEEecCCchhH---H---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542          152 -----------NDGAFDYVHTESVSLPH---W---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE  214 (465)
Q Consensus       152 -----------~~~~~DiI~~~~~~~~~---~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (465)
                                 ...++|+||+|+.....   .   ...++| ++++.||........++....     .....+...+..
T Consensus       159 ~~~~l~~~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p-~I~t~Hg~~~~e~~~~~~~~~-----~~~~~~~~~~~~  232 (475)
T cd03813         159 MLSPLLAAIARPLPKADVYHAVSTGYAGLLGALAKARRGTP-FLLTEHGIYTRERKIELLQAD-----WEMSYFRRLWIR  232 (475)
T ss_pred             HHHHHHHHhccCCCCCCEEeccCcchHHHHHHHHHHHhCCC-EEEecCCccHHHHHHHHHhcc-----cchHHHHHHHHH
Confidence                       34589999999764322   1   223567 999999976543222221110     000011112222


Q ss_pred             hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542          215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG  294 (465)
Q Consensus       215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G  294 (465)
                      .+..+  ++..++++|.|+++|+..++...+ +|.+++|+.+||||+|.+.|.+....        ..+ +++++++++|
T Consensus       233 ~~~~l--~~~~~~~ad~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~--------~~~-~~~~~i~~vG  300 (475)
T cd03813         233 FFESL--GRLAYQAADRITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA--------RPE-KEPPVVGLIG  300 (475)
T ss_pred             HHHHH--HHHHHHhCCEEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc--------ccC-CCCcEEEEEe
Confidence            22222  236789999999999999887766 78888999999999999887664321        012 2347888999


Q ss_pred             ccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch----hHH----HHhc--CCeEEcCCCChhHHHHHHHhcCeEEec
Q 044542          295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG----RRY----AELG--QNVKVLGALEAHQLSEFYNALDVFVNP  364 (465)
Q Consensus       295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~----~~~----~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~p  364 (465)
                      |+.+.||++.+++|++.+.++.|+++++|+|+++..    +.+    ++++  ++|+|+|   .+++.++|+.+|++++|
T Consensus       301 rl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlp  377 (475)
T cd03813         301 RVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLT  377 (475)
T ss_pred             ccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeC
Confidence            999999999999999999988899999999987421    222    2333  7999999   37899999999999999


Q ss_pred             ccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeee------CCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542          365 TLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN------EELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACK  437 (465)
Q Consensus       365 s~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~------~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~  437 (465)
                      |.. ||+|++++|||+||+|||+|+.|+.+ +++.+      +.+|+++++ |+++++++|.+++++ ++.+++++++++
T Consensus       378 S~~-Eg~p~~vlEAma~G~PVVatd~g~~~-elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~  454 (475)
T cd03813         378 SIS-EGQPLVILEAMAAGIPVVATDVGSCR-ELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGR  454 (475)
T ss_pred             chh-hcCChHHHHHHHcCCCEEECCCCChH-HHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHH
Confidence            975 99999999999999999999999998 88887      568999999 999999999999999 899999999999


Q ss_pred             HHHHhhCCHHHHHHHHHHHHH
Q 044542          438 EHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       438 ~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +++++.|+|++++++|.++|+
T Consensus       455 ~~v~~~~s~~~~~~~y~~lY~  475 (475)
T cd03813         455 KRVERYYTLERMIDSYRRLYL  475 (475)
T ss_pred             HHHHHhCCHHHHHHHHHHHhC
Confidence            999999999999999999984

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=4.7e-39  Score=311.81  Aligned_cols=334  Identities=24%  Similarity=0.279  Sum_probs=252.0

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC----C-C-----ccc-
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND----H-G-----SVN-  149 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~----~-~-----~~~-  149 (465)
                      ||+++++.+|+     +.++++.++++.|.  ||++++++.............  ..+......    . .     .+. 
T Consensus         1 ~~~~~~~~~~~-----~~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   71 (367)
T cd05844           1 RVLIFRPLLLA-----PSETFVRNQAEALR--RFRPVYVGGRRLGPAPLGALA--VRLADLAGGKAGLRLGALRLLTGSA   71 (367)
T ss_pred             CEEEEeCCCCC-----CchHHHHHHHHhcc--cCCcEEEEeeccCCCCCcccc--eeeeecccchhHHHHHHHHhccccc
Confidence            68999998763     37899999999995  678888877654432222111  111111000    0 0     000 


Q ss_pred             -----cCCCCCCcEEEecCCch--hH---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHH
Q 044542          150 -----LNNDGAFDYVHTESVSL--PH---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRL  219 (465)
Q Consensus       150 -----~~~~~~~DiI~~~~~~~--~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (465)
                           ..++.+||+||+|....  ..   ....++| +++++|+.........          ....  .......    
T Consensus        72 ~~~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~~~~p-~i~~~h~~~~~~~~~~----------~~~~--~~~~~~~----  134 (367)
T cd05844          72 PQLRRLLRRHRPDLVHAHFGFDGVYALPLARRLGVP-LVVTFHGFDATTSLAL----------LLRS--RWALYAR----  134 (367)
T ss_pred             cHHHHHHHhhCCCEEEeccCchHHHHHHHHHHcCCC-EEEEEeCccccccchh----------hccc--chhHHHH----
Confidence                 01678999999986421  11   1223567 9999997532110000          0000  0011111    


Q ss_pred             HHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccc
Q 044542          220 VDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD  299 (465)
Q Consensus       220 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~  299 (465)
                       .+...++.+|.++++|+.+++.+.+ ++++..++.++|||+|.+.+.+...            ..++.+++++|++.+.
T Consensus       135 -~~~~~~~~~d~ii~~s~~~~~~~~~-~~~~~~~i~vi~~g~d~~~~~~~~~------------~~~~~~i~~~G~~~~~  200 (367)
T cd05844         135 -RRRRLARRAALFIAVSQFIRDRLLA-LGFPPEKVHVHPIGVDTAKFTPATP------------ARRPPRILFVGRFVEK  200 (367)
T ss_pred             -HHHHHHHhcCEEEECCHHHHHHHHH-cCCCHHHeEEecCCCCHHhcCCCCC------------CCCCcEEEEEEeeccc
Confidence             2235678999999999999999988 5888889999999999887754321            1223677899999999


Q ss_pred             cCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecccC-----C
Q 044542          300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPTLR-----P  368 (465)
Q Consensus       300 Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~-----~  368 (465)
                      ||++.+++|++.+.+++++++|+++|+|+..+.++++      .++|.|+|+++++++..+|+.||++++||..     .
T Consensus       201 K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~  280 (367)
T cd05844         201 KGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDA  280 (367)
T ss_pred             cChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCc
Confidence            9999999999999888899999999998766655432      3789999999999999999999999999863     4


Q ss_pred             CCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHH
Q 044542          369 QGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTAT  447 (465)
Q Consensus       369 eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~  447 (465)
                      ||+|++++|||+||+|||+++.++.. +++.++++|+++++ |+++++++|.+++++ ++.+++++.+++++++++|||+
T Consensus       281 E~~~~~~~EA~a~G~PvI~s~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~  358 (367)
T cd05844         281 EGLPVVLLEAQASGVPVVATRHGGIP-EAVEDGETGLLVPEGDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLR  358 (367)
T ss_pred             cCCchHHHHHHHcCCCEEEeCCCCch-hheecCCeeEEECCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHH
Confidence            89999999999999999999999998 88899999999998 999999999999998 8899999999999999999999


Q ss_pred             HHHHHHHHH
Q 044542          448 KMASAYERF  456 (465)
Q Consensus       448 ~~~~~~~~~  456 (465)
                      .+++++.++
T Consensus       359 ~~~~~l~~i  367 (367)
T cd05844         359 RQTAKLEAL  367 (367)
T ss_pred             HHHHHHhcC
Confidence            999998753

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=1.1e-38  Score=307.04  Aligned_cols=226  Identities=15%  Similarity=0.193  Sum_probs=190.4

Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCccccc--ccCCCCCCcEEEEEeeccccccCHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPE--KLGVPANVSLVMGVAGRLVRDKGHPL  304 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~--~~g~~~~~~~~l~~~Grl~~~Kg~~~  304 (465)
                      ..+| ++++|...++.+.+.++++++|+.+||||+|...|.+........++  ..+++++. ++++++||+.+.||+..
T Consensus       338 ~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~-~vIg~VgRl~~~Kg~~~  415 (578)
T PRK15490        338 PGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDAD-TTIGGVFRFVGDKNPFA  415 (578)
T ss_pred             ecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCC-cEEEEEEEEehhcCHHH
Confidence            3444 77889989999988889999999999999999888765422112232  22344444 67889999999999999


Q ss_pred             HHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHH
Q 044542          305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA  378 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EA  378 (465)
                      +++++.++.++.|+++|+|+|+|+..+.++++    +  ++|+|+|+.  +++..+|+.+|++++||.+ ||||++++||
T Consensus       416 LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~--~Dv~~~LaaADVfVlPS~~-EGfp~vlLEA  492 (578)
T PRK15490        416 WIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGAS--RDVGYWLQKMNVFILFSRY-EGLPNVLIEA  492 (578)
T ss_pred             HHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCCh--hhHHHHHHhCCEEEEcccc-cCccHHHHHH
Confidence            99999998888899999999999887666543    3  889999996  7899999999999999976 9999999999


Q ss_pred             HHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHH---HHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          379 MHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEAL---ELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       379 ma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i---~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                      |++|+|||+|+.||.+ |++.++.+|+++++ |++++++++   ..+.++ .+.+..++++++++++++|||+.++++|.
T Consensus       493 MA~GlPVVATdvGG~~-EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~l-l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~  570 (578)
T PRK15490        493 QMVGVPVISTPAGGSA-ECFIEGVSGFILDDAQTVNLDQACRYAEKLVNL-WRSRTGICQQTQSFLQERFTVEHMVGTFV  570 (578)
T ss_pred             HHhCCCEEEeCCCCcH-HHcccCCcEEEECCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            9999999999999998 89999999999999 888888876   444544 45556789999999999999999999999


Q ss_pred             HHHHH
Q 044542          455 RFFLR  459 (465)
Q Consensus       455 ~~~~~  459 (465)
                      ++|.+
T Consensus       571 ki~~~  575 (578)
T PRK15490        571 KTIAS  575 (578)
T ss_pred             HHHHh
Confidence            99975

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-38  Score=306.33  Aligned_cols=332  Identities=26%  Similarity=0.370  Sum_probs=250.1

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCcc--cc--------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSV--NL--------  150 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~--------  150 (465)
                      ||+++++.||+  ..||.++++..++++|.+.||+|++++................ +..........  ..        
T Consensus         1 kil~i~~~~~p--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   77 (357)
T cd03795           1 RVLHVGKFYPP--DRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHR-VIRAPSLLNVASTPFSPSFFKQL   77 (357)
T ss_pred             CeeEecCCCCC--CCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCce-EEEeecccccccccccHHHHHHH
Confidence            79999998874  5899999999999999999999999998765443322221211 21111110000  00        


Q ss_pred             -CCCCCCcEEEecCCchh----HHhh-hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHH
Q 044542          151 -NNDGAFDYVHTESVSLP----HWRA-KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIR  224 (465)
Q Consensus       151 -~~~~~~DiI~~~~~~~~----~~~~-~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (465)
                       ....++|+||+|.....    .... .+.| .+.++|+....   ..               ........+     +..
T Consensus        78 ~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~---~~---------------~~~~~~~~~-----~~~  133 (357)
T cd03795          78 KKLAKKADVIHLHFPNPLADLALLLLPRKKP-VVVHWHSDIVK---QK---------------LLLKLYRPL-----QRR  133 (357)
T ss_pred             HhcCCCCCEEEEecCcchHHHHHHHhccCce-EEEEEcChhhc---cc---------------hhhhhhhHH-----HHH
Confidence             14778999999875321    1111 2445 88899963211   00               000111111     125


Q ss_pred             hhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHH
Q 044542          225 FFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPL  304 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~  304 (465)
                      +++.+|.++++|+...+.+...++. ..++.++|||+|...+.+......   .....+.+ +++++++|++.+.||++.
T Consensus       134 ~~~~~d~vi~~s~~~~~~~~~~~~~-~~~~~~i~~gi~~~~~~~~~~~~~---~~~~~~~~-~~~i~~~G~~~~~K~~~~  208 (357)
T cd03795         134 FLRRADAIVATSPNYAETSPVLRRF-RDKVRVIPLGLDPARYPRPDALEE---AIWRRAAG-RPFFLFVGRLVYYKGLDV  208 (357)
T ss_pred             HHHhcCEEEeCcHHHHHHHHHhcCC-ccceEEecCCCChhhcCCcchhhh---HhhcCCCC-CcEEEEecccccccCHHH
Confidence            6789999999999999988875554 388999999999887765432111   11122333 377889999999999999


Q ss_pred             HHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHH
Q 044542          305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIE  377 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~E  377 (465)
                      +++|++++.    +++++++|+|+....++++    +  ++|+|+|+++++++.++|+.||++++||.. .|++|++++|
T Consensus       209 li~a~~~l~----~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~E  284 (357)
T cd03795         209 LLEAAAALP----DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLE  284 (357)
T ss_pred             HHHHHHhcc----CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHH
Confidence            999999985    7999999999877665543    2  899999999999999999999999999863 5999999999


Q ss_pred             HHHcCCeEEecCCCCcceeeeee-CCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542          378 AMHCGRTVLTPNYPSIVRTVVVN-EELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA  450 (465)
Q Consensus       378 Ama~G~PvI~s~~gg~~~e~v~~-~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  450 (465)
                      ||++|+|||+++.++.. +.+.+ +++|+++++ |+++++++|.+++++ ++.+++|++++++.++++|||+.++
T Consensus       285 a~~~g~Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~  357 (357)
T cd03795         285 AMAFGKPVISTEIGTGG-SYVNLHGVTGLVVPPGDPAALAEAIRRLLED-PELRERLGEAARERAEEEFTADRMV  357 (357)
T ss_pred             HHHcCCCEEecCCCCch-hHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHhcchHhhC
Confidence            99999999999999988 66665 889999998 999999999999999 8999999999999999999999864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.6e-38  Score=307.18  Aligned_cols=345  Identities=24%  Similarity=0.300  Sum_probs=262.4

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEee-----------c-CCCcc
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAA-----------N-DHGSV  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~-----------~-~~~~~  148 (465)
                      ||++++..||+  ..||.+.++..++++|.+.||+|++++...........  ....+....           . .....
T Consensus         1 kIl~i~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (364)
T cd03814           1 RIAIVTDTFLP--QVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA--RVVPVPSVPLPGYPEIRLALPPRRRVR   76 (364)
T ss_pred             CeEEEecccCc--cccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC--CceeecccccCcccceEecccchhhHH
Confidence            79999998873  56999999999999999999999999987643222110  000110000           0 00011


Q ss_pred             ccCCCCCCcEEEecCCchhHH------hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          149 NLNNDGAFDYVHTESVSLPHW------RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       149 ~~~~~~~~DiI~~~~~~~~~~------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                      ...++.+||+||++......+      ...++| ++..+|+...........               ..........  .
T Consensus        77 ~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~---------------~~~~~~~~~~--~  138 (364)
T cd03814          77 RLLDAFAPDVVHIATPGPLGLAALRAARRLGIP-VVTSYHTDFPEYLRYYGL---------------GPLSWLAWAY--L  138 (364)
T ss_pred             HHHHhcCCCEEEEeccchhhHHHHHHHHHcCCC-EEEEEecChHHHhhhccc---------------chHhHhhHHH--H
Confidence            111577999999986532211      223567 899999865432211000               0111111111  1


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCH
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGH  302 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~  302 (465)
                      ..+++.+|.++++|+...+.+.+ .  ...++.+++||+|.+.+.+.... ...+++++ + +++.+++++|++...||+
T Consensus       139 ~~~~~~~d~i~~~s~~~~~~~~~-~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~-~-~~~~~i~~~G~~~~~k~~  212 (364)
T cd03814         139 RWFHNRADRVLVPSPSLADELRA-R--GFRRVRLWPRGVDTELFHPRRRD-EALRARLG-P-PDRPVLLYVGRLAPEKNL  212 (364)
T ss_pred             HHHHHhCCEEEeCCHHHHHHHhc-c--CCCceeecCCCccccccCccccc-HHHHHHhC-C-CCCeEEEEEeccccccCH
Confidence            25678999999999999986654 2  34689999999999877654332 23344444 2 334778899999999999


Q ss_pred             HHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcC
Q 044542          303 PLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG  382 (465)
Q Consensus       303 ~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G  382 (465)
                      +.+++++..+.++ ++++|+++|+|+..+.++...++|.++|+++.+++.++|+.||++++||.. |++|++++|||+||
T Consensus       213 ~~~i~~~~~l~~~-~~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~-e~~~~~~lEa~a~g  290 (364)
T cd03814         213 EALLDADLPLRRR-PPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRT-ETFGLVVLEAMASG  290 (364)
T ss_pred             HHHHHHHHHhhhc-CCceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECccc-ccCCcHHHHHHHcC
Confidence            9999999999887 899999999998887777566899999999999999999999999999975 99999999999999


Q ss_pred             CeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          383 RTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       383 ~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +|||+++.++.. +++.++++|+++++ |.++++++|.+++.+ ++.++++++++++.+ ++|+|+.++++++++|+
T Consensus       291 ~PvI~~~~~~~~-~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  364 (364)
T cd03814         291 LPVVAPDAGGPA-DIVTDGENGLLVEPGDAEAFAAALAALLAD-PELRRRMAARARAEA-ERRSWEAFLDNLLEAYR  364 (364)
T ss_pred             CCEEEcCCCCch-hhhcCCcceEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH-hhcCHHHHHHHHHHhhC
Confidence            999999999998 88888899999999 999999999999999 899999999999999 55999999999999873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=4.9e-39  Score=311.70  Aligned_cols=338  Identities=17%  Similarity=0.198  Sum_probs=247.6

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC---ccc--CCcceEEEeecCC-Cc-------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN---DVH--QGNLHVHFAANDH-GS-------  147 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~~~--~~~~~v~~~~~~~-~~-------  147 (465)
                      ||++++..+    ..||+++++.++++.|.+.||+|+++++........   ...  ..+..+....... ..       
T Consensus         1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   76 (372)
T cd03792           1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNALQGADIELSEEEKEIYLEWNEEN   76 (372)
T ss_pred             CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence            689999875    569999999999999999999999998765432111   000  0011111100000 00       


Q ss_pred             -cccCCCCCCcEEEecCCchhHH---hhh-cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          148 -VNLNNDGAFDYVHTESVSLPHW---RAK-MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       148 -~~~~~~~~~DiI~~~~~~~~~~---~~~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                       .......+||+||+|++.....   ... +.| ++.+.|.....               +.     ......+      
T Consensus        77 ~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~-~i~~~H~~~~~---------------~~-----~~~~~~~------  129 (372)
T cd03792          77 AERPLLDLDADVVVIHDPQPLALPLFKKKRGRP-WIWRCHIDLSS---------------PN-----RRVWDFL------  129 (372)
T ss_pred             hccccccCCCCEEEECCCCchhHHHhhhcCCCe-EEEEeeeecCC---------------Cc-----HHHHHHH------
Confidence             0011356899999998642222   222 556 88888963210               00     0111111      


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccC---CcccCcccccccCCCCCCcEEEEEeeccccc
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH---DPEAGVRFPEKLGVPANVSLVMGVAGRLVRD  299 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~---~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~  299 (465)
                      ...++++|.+++.|..   ...  .+++..++ ++|||+|......   .+......++++|++++. .+++++||+.+.
T Consensus       130 ~~~~~~~d~~i~~~~~---~~~--~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~vgrl~~~  202 (372)
T cd03792         130 QPYIEDYDAAVFHLPE---YVP--PQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPER-PYITQVSRFDPW  202 (372)
T ss_pred             HHHHHhCCEEeecHHH---hcC--CCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCC-cEEEEEeccccc
Confidence            1456789998888732   222  24555566 9999999753211   112233567788887776 677799999999


Q ss_pred             cCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--------hHHH-Hhc--CCeEEcCCC--ChhHHHHHHHhcCeEEeccc
Q 044542          300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--------RRYA-ELG--QNVKVLGAL--EAHQLSEFYNALDVFVNPTL  366 (465)
Q Consensus       300 Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--------~~~~-~l~--~~V~~~g~v--~~~~~~~~~~~aDv~v~ps~  366 (465)
                      ||++.+++|++.+.++.++++|+++|+|+..        +.+. .++  ++|.|+|..  +++++..+|++||++++||.
T Consensus       203 Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~  282 (372)
T cd03792         203 KDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSI  282 (372)
T ss_pred             cCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCC
Confidence            9999999999999887789999999998542        1212 122  789999986  88999999999999999997


Q ss_pred             CCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542          367 RPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA  446 (465)
Q Consensus       367 ~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  446 (465)
                      + ||||++++|||+||+|||+++.++.. +++.++.+|++++ +.++++++|.+++.+ ++.+++|++++++.+.++|+|
T Consensus       283 ~-Eg~g~~~lEA~a~G~Pvv~s~~~~~~-~~i~~~~~g~~~~-~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~  358 (372)
T cd03792         283 R-EGFGLTVTEALWKGKPVIAGPVGGIP-LQIEDGETGFLVD-TVEEAAVRILYLLRD-PELRRKMGANAREHVRENFLI  358 (372)
T ss_pred             c-cCCCHHHHHHHHcCCCEEEcCCCCch-hhcccCCceEEeC-CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCH
Confidence            5 99999999999999999999999998 8889999999987 677899999999998 889999999999999988999


Q ss_pred             HHHHHHHHHHHHHh
Q 044542          447 TKMASAYERFFLRM  460 (465)
Q Consensus       447 ~~~~~~~~~~~~~~  460 (465)
                      +.++++|+++|+++
T Consensus       359 ~~~~~~~~~~~~~~  372 (372)
T cd03792         359 TRHLKDYLYLISKL  372 (372)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999863

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.7e-39  Score=308.84  Aligned_cols=318  Identities=23%  Similarity=0.332  Sum_probs=245.6

Q ss_pred             CCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC-Ccccc----------CCCCCCcEEEec
Q 044542           94 APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH-GSVNL----------NNDGAFDYVHTE  162 (465)
Q Consensus        94 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~----------~~~~~~DiI~~~  162 (465)
                      ..||+++++.+++++|.+.||+|++++......  ......+..+....... ..+..          .++.+||+||+|
T Consensus         8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dii~~~   85 (355)
T cd03819           8 ESGGVERGTLELARALVERGHRSLVASAGGRLV--AELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVDIVHAR   85 (355)
T ss_pred             ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchH--HHHHhcCCeEEEccccccchhhhHHHHHHHHHHHHHcCCCEEEEC
Confidence            459999999999999999999999998754221  11222222222221111 11111          167899999999


Q ss_pred             CCc--hhHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeCh
Q 044542          163 SVS--LPHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISN  237 (465)
Q Consensus       163 ~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~  237 (465)
                      +..  +...   ...++| ++.++|+......                               .....++.+|.++++|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~-------------------------------~~~~~~~~~~~vi~~s~  133 (355)
T cd03819          86 SRAPAWSAYLAARRTRPP-FVTTVHGFYSVNF-------------------------------RYNAIMARGDRVIAVSN  133 (355)
T ss_pred             CCchhHHHHHHHHhcCCC-EEEEeCCchhhHH-------------------------------HHHHHHHhcCEEEEeCH
Confidence            742  1111   123567 9999998653210                               01144578999999999


Q ss_pred             hHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCc---ccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhh
Q 044542          238 SAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGV---RFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITR  314 (465)
Q Consensus       238 ~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~---~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~  314 (465)
                      ...+.+.+.++++.+++.++|||+|...+.+......   .++++++.+++. ++++++||+.+.||++.+++++..+.+
T Consensus       134 ~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Gr~~~~Kg~~~li~~~~~l~~  212 (355)
T cd03819         134 FIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGK-PVILLPGRLTRWKGQEVFIEALARLKK  212 (355)
T ss_pred             HHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCc-eEEEEeeccccccCHHHHHHHHHHHHh
Confidence            9999999878998899999999999988765432211   145666666555 778899999999999999999999988


Q ss_pred             cCCCeEEEEEeCCcchhHH--------HHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe
Q 044542          315 DHPGVYLLVAGTGPWGRRY--------AELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT  384 (465)
Q Consensus       315 ~~~~~~l~ivG~g~~~~~~--------~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P  384 (465)
                      ++++++++++|.++..+.+        ++++  ++|.|+|+.  +++.++|+.||++++||.+.|++|++++|||++|+|
T Consensus       213 ~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~P  290 (355)
T cd03819         213 DDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHC--SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRP  290 (355)
T ss_pred             cCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCc--ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCC
Confidence            8789999999987654322        2223  789999994  799999999999999995459999999999999999


Q ss_pred             EEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHH
Q 044542          385 VLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKM  449 (465)
Q Consensus       385 vI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  449 (465)
                      ||+++.++.. +++.++.+|+++++ |+++++++|..++..+++.+.++++++++.++++|+|+.|
T Consensus       291 vI~~~~~~~~-e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~~  355 (355)
T cd03819         291 VIASDHGGAR-ETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM  355 (355)
T ss_pred             EEEcCCCCcH-HHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence            9999999987 88888889999998 9999999997666644899999999999999999999864

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-38  Score=306.29  Aligned_cols=342  Identities=27%  Similarity=0.360  Sum_probs=266.1

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCC--c-------cccC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHG--S-------VNLN  151 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-------~~~~  151 (465)
                      ||+++++.++    .||+++++..++++|.+.||+|++++..............+..+........  .       ....
T Consensus         1 ~i~~i~~~~~----~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~   76 (365)
T cd03807           1 KVLHVITGLD----VGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKRPGRPDPGALLRLYKLI   76 (365)
T ss_pred             CeEEEEeecc----CccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecccccccHHHHHHHHHHH
Confidence            6899999873    4999999999999999999999999976543332223333333444333222  1       1111


Q ss_pred             CCCCCcEEEecCCch--hH----HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          152 NDGAFDYVHTESVSL--PH----WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       152 ~~~~~DiI~~~~~~~--~~----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                      ++.+||+||++....  ..    ....+.+ ++++.|+......                 .........+.     ...
T Consensus        77 ~~~~~div~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~-----------------~~~~~~~~~~~-----~~~  133 (365)
T cd03807          77 RRLRPDVVHTWMYHADLYGGLAARLAGVPP-VIWGIRHSDLDLG-----------------KKSTRLVARLR-----RLL  133 (365)
T ss_pred             HhhCCCEEEeccccccHHHHHHHHhcCCCc-EEEEecCCccccc-----------------chhHhHHHHHH-----HHh
Confidence            678999999986421  11    1113345 8999998643210                 00011112221     245


Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHH
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLL  305 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~l  305 (465)
                      .+.++.++++|+...+.+.+ ++++.+++.++|||+|...+.+........+++++++++. ++++++|++.+.||++.+
T Consensus       134 ~~~~~~~i~~s~~~~~~~~~-~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~K~~~~l  211 (365)
T cd03807         134 SSFIPLIVANSAAAAEYHQA-IGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDT-FLIGIVARLHPQKDHATL  211 (365)
T ss_pred             ccccCeEEeccHHHHHHHHH-cCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCC-eEEEEecccchhcCHHHH
Confidence            57789999999999999988 4888899999999999888776655555667788887665 788899999999999999


Q ss_pred             HHHHHHhhhcCCCeEEEEEeCCcchhHHHH-----hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHH
Q 044542          306 YEAFSSITRDHPGVYLLVAGTGPWGRRYAE-----LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA  378 (465)
Q Consensus       306 l~a~~~l~~~~~~~~l~ivG~g~~~~~~~~-----l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EA  378 (465)
                      ++|+..+.+++++++|+++|.++.....+.     ++  ++|.+.|..  +++..+|+.||++++||.. ||+|++++||
T Consensus       212 i~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~ps~~-e~~~~~~~Ea  288 (365)
T cd03807         212 LRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER--SDVPALLNALDVFVLSSLS-EGFPNVLLEA  288 (365)
T ss_pred             HHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc--ccHHHHHHhCCEEEeCCcc-ccCCcHHHHH
Confidence            999999988888999999998876543322     22  689999976  6899999999999999986 9999999999


Q ss_pred             HHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          379 MHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       379 ma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      |+||+|||+++.++.. +++.+  +|+++++ |+++++++|.+++++ ++.+.+++++++++++++|||++++++|.++|
T Consensus       289 ~a~g~PvI~~~~~~~~-e~~~~--~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y  364 (365)
T cd03807         289 MACGLPVVATDVGDNA-ELVGD--TGFLVPPGDPEALAEAIEALLAD-PALRQALGEAARERIEENFSIEAMVEAYEELY  364 (365)
T ss_pred             HhcCCCEEEcCCCChH-HHhhc--CCEEeCCCCHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            9999999999999998 77766  8999998 999999999999999 78999999999999999999999999999998


Q ss_pred             H
Q 044542          458 L  458 (465)
Q Consensus       458 ~  458 (465)
                      +
T Consensus       365 ~  365 (365)
T cd03807         365 R  365 (365)
T ss_pred             C
Confidence            4

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.2e-38  Score=304.98  Aligned_cols=345  Identities=23%  Similarity=0.276  Sum_probs=258.2

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcc----eEEEeecCC---Ccc-----
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNL----HVHFAANDH---GSV-----  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~----~v~~~~~~~---~~~-----  148 (465)
                      ||+++++.++  +..||.++++.+++++|.+.||+|++++................    .........   ..+     
T Consensus         1 kIl~i~~~~~--~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (375)
T cd03821           1 KILHVIPSFD--PKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLL   78 (375)
T ss_pred             CeEEEcCCCC--cccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHH
Confidence            7999999886  57899999999999999999999999998765443321111100    000000000   000     


Q ss_pred             --ccCCCCCCcEEEecCCch-h----HHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHH
Q 044542          149 --NLNNDGAFDYVHTESVSL-P----HWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRL  219 (465)
Q Consensus       149 --~~~~~~~~DiI~~~~~~~-~----~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (465)
                        ......++|+||+++... .    ...  ..++| +++..|+.......                 ....+...+...
T Consensus        79 ~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~  140 (375)
T cd03821          79 AWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIP-YVVSPHGMLDPWAL-----------------PHKALKKRLAWF  140 (375)
T ss_pred             HHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCC-EEEEcccccccccc-----------------ccchhhhHHHHH
Confidence              001567899999997321 1    111  23566 89999986432110                 001122222233


Q ss_pred             HHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccc
Q 044542          220 VDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD  299 (465)
Q Consensus       220 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~  299 (465)
                      ..+...++.++.+++.|+.........  .+..++.++|||+|.+.+.+......  |+.++.+.+. .+++++|++.+.
T Consensus       141 ~~~~~~~~~~~~i~~~s~~~~~~~~~~--~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~i~~~G~~~~~  215 (375)
T cd03821         141 LFERRLLQAAAAVHATSEQEAAEIRRL--GLKAPIAVIPNGVDIPPFAALPSRGR--RRKFPILPDK-RIILFLGRLHPK  215 (375)
T ss_pred             HHHHHHHhcCCEEEECCHHHHHHHHhh--CCcccEEEcCCCcChhccCcchhhhh--hhhccCCCCC-cEEEEEeCcchh
Confidence            334466788999999998777776653  45689999999999988766443221  5555555555 778899999999


Q ss_pred             cCHHHHHHHHHHhhhcCCCeEEEEEeCCcc--hhHHH----Hhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCC
Q 044542          300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPW--GRRYA----ELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL  371 (465)
Q Consensus       300 Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~~~----~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~  371 (465)
                      ||++.+++|+..+.+++++++|+++|.+..  ...++    +++  ++|.++|+++++++.++|+.||++++||.. ||+
T Consensus       216 K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-e~~  294 (375)
T cd03821         216 KGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHS-ENF  294 (375)
T ss_pred             cCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEecccc-CCC
Confidence            999999999999998889999999997643  22333    222  889999999999999999999999999986 999


Q ss_pred             cHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          372 DLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       372 ~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      |++++|||++|+|||+++.++.. +++.+ ..|++++.++++++++|.+++++ ++.++++++++++.+.++|+|+.+++
T Consensus       295 ~~~~~Eama~G~PvI~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~  371 (375)
T cd03821         295 GIVVAEALACGTPVVTTDKVPWQ-ELIEY-GCGWVVDDDVDALAAALRRALEL-PQRLKAMGENGRALVEERFSWTAIAQ  371 (375)
T ss_pred             CcHHHHHHhcCCCEEEcCCCCHH-HHhhc-CceEEeCCChHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            99999999999999999999998 77777 78999888779999999999999 79999999999999999999999999


Q ss_pred             HHH
Q 044542          452 AYE  454 (465)
Q Consensus       452 ~~~  454 (465)
                      +++
T Consensus       372 ~~~  374 (375)
T cd03821         372 QLL  374 (375)
T ss_pred             Hhh
Confidence            886

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3e-38  Score=302.21  Aligned_cols=315  Identities=24%  Similarity=0.318  Sum_probs=237.1

Q ss_pred             eeEEEEeCCC-C-CCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEE--eecCC-------Ccc
Q 044542           80 LKLAVFSKTW-P-IGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHF--AANDH-------GSV  148 (465)
Q Consensus        80 mkIl~v~~~~-p-~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~--~~~~~-------~~~  148 (465)
                      |||+++++.+ | +++..||.++++..++++|.+.||+|++++....................  .....       ...
T Consensus         1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (335)
T cd03802           1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAE   80 (335)
T ss_pred             CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHH
Confidence            8999999976 2 13688999999999999999999999999987654322111000000000  00000       001


Q ss_pred             ccCCCCCCcEEEecCCchhH--HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhh
Q 044542          149 NLNNDGAFDYVHTESVSLPH--WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF  226 (465)
Q Consensus       149 ~~~~~~~~DiI~~~~~~~~~--~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (465)
                      ...++.+||+||+|+.....  ....+.| ++.+.|+......                       ..       .....
T Consensus        81 ~~~~~~~~Divh~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~-----------------------~~-------~~~~~  129 (335)
T cd03802          81 RALAAGDFDIVHNHSLHLPLPFARPLPVP-VVTTLHGPPDPEL-----------------------LK-------LYYAA  129 (335)
T ss_pred             HHHhcCCCCEEEecCcccchhhhcccCCC-EEEEecCCCCccc-----------------------ch-------HHHhh
Confidence            11167889999999864333  2334556 9999998542100                       00       01334


Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY  306 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll  306 (465)
                      ...+.++++|+..++.+...     .++.+||||+|.+.|.+...             ++ ..++++||+.+.||++.++
T Consensus       130 ~~~~~~~~~s~~~~~~~~~~-----~~~~vi~ngvd~~~~~~~~~-------------~~-~~i~~~Gr~~~~Kg~~~li  190 (335)
T cd03802         130 RPDVPFVSISDAQRRPWPPL-----PWVATVHNGIDLDDYPFRGP-------------KG-DYLLFLGRISPEKGPHLAI  190 (335)
T ss_pred             CcCCeEEEecHHHHhhcccc-----cccEEecCCcChhhCCCCCC-------------CC-CEEEEEEeeccccCHHHHH
Confidence            67788999999988876542     78999999999988765211             22 4567999999999999999


Q ss_pred             HHHHHhhhcCCCeEEEEEeCCcchhHHH----Hh---cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHH
Q 044542          307 EAFSSITRDHPGVYLLVAGTGPWGRRYA----EL---GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAM  379 (465)
Q Consensus       307 ~a~~~l~~~~~~~~l~ivG~g~~~~~~~----~l---~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAm  379 (465)
                      +++++.     +++|+++|.|+..+...    +.   .++|.|+|+++++++.++|+.+|++++||.+.|++|++++|||
T Consensus       191 ~~~~~~-----~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAm  265 (335)
T cd03802         191 RAARRA-----GIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAM  265 (335)
T ss_pred             HHHHhc-----CCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHH
Confidence            987653     78999999987654332    22   4899999999999999999999999999975699999999999


Q ss_pred             HcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          380 HCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       380 a~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +||+|||+++.||.. |++.++.+|+++++ +++++++|.++.+. +      .+++++.+.++|||+.++++|+++|+
T Consensus       266 a~G~PvI~~~~~~~~-e~i~~~~~g~l~~~-~~~l~~~l~~l~~~-~------~~~~~~~~~~~~s~~~~~~~~~~~y~  335 (335)
T cd03802         266 ACGTPVIAFRRGAVP-EVVEDGVTGFLVDS-VEELAAAVARADRL-D------RAACRRRAERRFSAARMVDDYLALYR  335 (335)
T ss_pred             hcCCCEEEeCCCCch-hheeCCCcEEEeCC-HHHHHHHHHHHhcc-H------HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            999999999999998 89999889999995 99999999998765 2      24677788899999999999999984

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-37  Score=301.69  Aligned_cols=337  Identities=21%  Similarity=0.245  Sum_probs=245.1

Q ss_pred             eEEEEeCC-CCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC-Cccc-----cC--
Q 044542           81 KLAVFSKT-WPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH-GSVN-----LN--  151 (465)
Q Consensus        81 kIl~v~~~-~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~-----~~--  151 (465)
                      ||++++.. +|  +..||+++++.+++++|.++||+|+|++......... ....+..+...+... ....     ..  
T Consensus         1 ~i~~i~~~~~~--~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~   77 (363)
T cd04955           1 KIAIIGTRGIP--AKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKE-TEYNGVRLIHIPAPEIGGLGTIIYDILAI   77 (363)
T ss_pred             CeEEEecCcCC--cccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcc-cccCCceEEEcCCCCccchhhhHHHHHHH
Confidence            68999664 55  5789999999999999999999999999876543321 112233333322221 1100     00  


Q ss_pred             -----CCCCCcEEEecCCch--hHHhh--hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          152 -----NDGAFDYVHTESVSL--PHWRA--KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       152 -----~~~~~DiI~~~~~~~--~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                           .+.++|+||...+..  ...+.  .+.| ++++.|+.....   .          .. ......+...     .+
T Consensus        78 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~---~----------~~-~~~~~~~~~~-----~~  137 (363)
T cd04955          78 LHALFVKRDIDHVHALGPAIAPFLPLLRLKGKK-VVVNMDGLEWKR---A----------KW-GRPAKRYLKF-----GE  137 (363)
T ss_pred             HHHHhccCCeEEEEecCccHHHHHHHHHhcCCC-EEEEccCcceee---c----------cc-ccchhHHHHH-----HH
Confidence                 245566666555432  11111  2456 999999853210   0          00 0000111111     12


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCH
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGH  302 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~  302 (465)
                      ...++.+|.++++|+..++.+++.+|.+.   .+||||+|...+.+    ....+++++++++.  .++++||+.+.||+
T Consensus       138 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~---~~i~ngv~~~~~~~----~~~~~~~~~~~~~~--~i~~~G~~~~~Kg~  208 (363)
T cd04955         138 KLAVKFADRLIADSPGIKEYLKEKYGRDS---TYIPYGADHVVSSE----EDEILKKYGLEPGR--YYLLVGRIVPENNI  208 (363)
T ss_pred             HHHHhhccEEEeCCHHHHHHHHHhcCCCC---eeeCCCcChhhcch----hhhhHHhcCCCCCc--EEEEEecccccCCH
Confidence            35678899999999999999987787533   89999999876544    11234445554443  45699999999999


Q ss_pred             HHHHHHHHHhhhcCCCeEEEEEeCCcchh----HHH-Hh--cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542          303 PLLYEAFSSITRDHPGVYLLVAGTGPWGR----RYA-EL--GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL  375 (465)
Q Consensus       303 ~~ll~a~~~l~~~~~~~~l~ivG~g~~~~----~~~-~l--~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~  375 (465)
                      +.+++|++++..   +++|+++|+|+...    .++ ++  .++|+++|+++++++.++|+.||++++||...|++|+++
T Consensus       209 ~~li~a~~~l~~---~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~  285 (363)
T cd04955         209 DDLIEAFSKSNS---GKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSL  285 (363)
T ss_pred             HHHHHHHHhhcc---CceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHH
Confidence            999999998854   78999999974432    222 22  289999999999999999999999999997559999999


Q ss_pred             HHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          376 IEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       376 ~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                      +|||+||+|||+|+.|+.. |++.+  +|.++++ |.  ++++|.+++++ ++.+.++++++++.+.++|||+.++++|+
T Consensus       286 ~EAma~G~PvI~s~~~~~~-e~~~~--~g~~~~~~~~--l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  359 (363)
T cd04955         286 LEAMAYGCPVLASDNPFNR-EVLGD--KAIYFKVGDD--LASLLEELEAD-PEEVSAMAKAARERIREKYTWEKIADQYE  359 (363)
T ss_pred             HHHHHcCCCEEEecCCccc-eeecC--CeeEecCchH--HHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            9999999999999999998 77654  7888887 44  99999999999 78899999999999999999999999999


Q ss_pred             HHHH
Q 044542          455 RFFL  458 (465)
Q Consensus       455 ~~~~  458 (465)
                      ++|+
T Consensus       360 ~~y~  363 (363)
T cd04955         360 ELYK  363 (363)
T ss_pred             HHhC
Confidence            9984

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.9e-38  Score=305.58  Aligned_cols=345  Identities=23%  Similarity=0.266  Sum_probs=258.7

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCc-----------cc
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGS-----------VN  149 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~  149 (465)
                      ||++++..++++ ..||+++++.+++++|.+.||+|++++...........................           ..
T Consensus         1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (365)
T cd03809           1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRL   79 (365)
T ss_pred             CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHH
Confidence            689999887642 689999999999999999999999999887554433211111110000000000           01


Q ss_pred             cCCCCCCcEEEecCCchhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhccc
Q 044542          150 LNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSY  229 (465)
Q Consensus       150 ~~~~~~~DiI~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (465)
                      .....++|+||+++.........+.| .+.++|+...........               .........  .+...++.+
T Consensus        80 ~~~~~~~Dii~~~~~~~~~~~~~~~~-~i~~~hd~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~  141 (365)
T cd03809          80 LLLLLGLDLLHSPHNTAPLLRLRGVP-VVVTIHDLIPLRFPEYFS---------------PGFRRYFRR--LLRRALRRA  141 (365)
T ss_pred             HhhhcCCCeeeecccccCcccCCCCC-EEEEeccchhhhCcccCC---------------HHHHHHHHH--HHHHHHHHc
Confidence            11567899999998654443444567 999999875432211100               011111111  123668899


Q ss_pred             CEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHH
Q 044542          230 NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAF  309 (465)
Q Consensus       230 d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~  309 (465)
                      |.++++|+..++.+.+.++.+..++.++|||+|...+.......   +.+.....+. .+++++|++.+.||++.+++++
T Consensus       142 d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~i~~~G~~~~~K~~~~~l~~~  217 (365)
T cd03809         142 DAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE---VLRALYLLPR-PYFLYVGTIEPRKNLERLLEAF  217 (365)
T ss_pred             CEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH---HHHHhcCCCC-CeEEEeCCCccccCHHHHHHHH
Confidence            99999999999999998887788999999999988775543211   2222233333 6788999999999999999999


Q ss_pred             HHhhhcCCCeEEEEEeCCcchh--HHH---Hh--cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcC
Q 044542          310 SSITRDHPGVYLLVAGTGPWGR--RYA---EL--GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG  382 (465)
Q Consensus       310 ~~l~~~~~~~~l~ivG~g~~~~--~~~---~l--~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G  382 (465)
                      ..+.+.+++++|+++|.+....  ..+   ++  .++|+++|+++++++.++|+.||++++||.. |++|++++|||++|
T Consensus       218 ~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~-e~~~~~~~Ea~a~G  296 (365)
T cd03809         218 ARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLY-EGFGLPVLEAMACG  296 (365)
T ss_pred             HHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchh-ccCCCCHHHHhcCC
Confidence            9999887789999999764322  111   23  3899999999999999999999999999976 99999999999999


Q ss_pred             CeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          383 RTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       383 ~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                      +|||+++.|+.. +++  ++.|+++++ |+++++++|.+++.+ ++.+.++++++++.+++ |+|+++++++.
T Consensus       297 ~pvI~~~~~~~~-e~~--~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~-~sw~~~~~~~~  364 (365)
T cd03809         297 TPVIASNISSLP-EVA--GDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAKR-FSWEKTARRTL  364 (365)
T ss_pred             CcEEecCCCCcc-cee--cCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHh-CCHHHHHHHHh
Confidence            999999999998 666  346888888 999999999999998 89999999999976655 99999999886

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=1.4e-37  Score=300.27  Aligned_cols=350  Identities=30%  Similarity=0.458  Sum_probs=269.3

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEE---eecCC---------Ccc
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHF---AANDH---------GSV  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~---~~~~~---------~~~  148 (465)
                      ||+++++.+|+  ..||.+.++..++++|.+.||+|++++....................   .....         ...
T Consensus         1 kI~ii~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
T cd03801           1 KILLVTPEYPP--SVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLR   78 (374)
T ss_pred             CeeEEecccCC--ccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHH
Confidence            69999998764  36999999999999999999999999988765443321111111110   00000         000


Q ss_pred             ccCCCCCCcEEEecCCchhHH-----hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH
Q 044542          149 NLNNDGAFDYVHTESVSLPHW-----RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI  223 (465)
Q Consensus       149 ~~~~~~~~DiI~~~~~~~~~~-----~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (465)
                      ...+..++|+||++.......     ...+.| ++.++|+.........                .......  ....+.
T Consensus        79 ~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~----------------~~~~~~~--~~~~~~  139 (374)
T cd03801          79 RLLRRERFDVVHAHDWLALLAAALAARLLGIP-LVLTVHGLEFGRPGNE----------------LGLLLKL--ARALER  139 (374)
T ss_pred             HHhhhcCCcEEEEechhHHHHHHHHHHhcCCc-EEEEeccchhhccccc----------------hhHHHHH--HHHHHH
Confidence            111677999999998643332     233556 9999999764322110                0011111  111223


Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP  303 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~  303 (465)
                      ..++.+|.++++|+...+.+.+.++.+..++.++|||+|...+.+..   ...+.......+ .++++++|++.+.||++
T Consensus       140 ~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~i~~~g~~~~~k~~~  215 (374)
T cd03801         140 RALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP---RAARRRLGIPED-EPVILFVGRLVPRKGVD  215 (374)
T ss_pred             HHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc---hHHHhhcCCcCC-CeEEEEecchhhhcCHH
Confidence            66789999999999999999997776667999999999988775432   112222222333 37888999999999999


Q ss_pred             HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHH
Q 044542          304 LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIE  377 (465)
Q Consensus       304 ~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~E  377 (465)
                      .+++++..+.+++++++|+++|.++..+.++++      .++|.+.|+++++++.++|+.||++++|+.. |++|++++|
T Consensus       216 ~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~-~~~~~~~~E  294 (374)
T cd03801         216 LLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLY-EGFGLVLLE  294 (374)
T ss_pred             HHHHHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchh-ccccchHHH
Confidence            999999999888889999999988777666542      3899999999999999999999999999986 999999999


Q ss_pred             HHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 044542          378 AMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERF  456 (465)
Q Consensus       378 Ama~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~  456 (465)
                      ||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++.+ ++.++++++++++.+.+.|+|+++++++.++
T Consensus       295 a~~~g~pvI~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (374)
T cd03801         295 AMAAGLPVVASDVGGIP-EVVEDGETGLLVPPGDPEALAEAILRLLDD-PELRRRLGEAARERVAERFSWDRVAARTEEV  372 (374)
T ss_pred             HHHcCCcEEEeCCCChh-HHhcCCcceEEeCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence            99999999999999998 88888999999999 899999999999999 8899999999998999999999999999998


Q ss_pred             HH
Q 044542          457 FL  458 (465)
Q Consensus       457 ~~  458 (465)
                      |+
T Consensus       373 ~~  374 (374)
T cd03801         373 YY  374 (374)
T ss_pred             hC
Confidence            73

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=4.4e-37  Score=300.57  Aligned_cols=362  Identities=13%  Similarity=0.127  Sum_probs=248.2

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc--EEEEEeCCCCCCCCC-----------cccCCcceEEE---ee
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH--EIHVFTAPSDRKPHN-----------DVHQGNLHVHF---AA  142 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~~~-----------~~~~~~~~v~~---~~  142 (465)
                      +++|++++++.   ...||+|+.+...+.+|.+.|+  +|.++|...+.....           ++......++.   ..
T Consensus        33 ~~~v~f~HP~~---~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~l~~~~~  109 (463)
T PLN02949         33 KRAVGFFHPYT---NDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKW  109 (463)
T ss_pred             CcEEEEECCCC---CCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEEeccccc
Confidence            56999999875   3445999999999999999998  777777653222211           00101111111   01


Q ss_pred             cCCCccccC-----------------CCCCCcEEEecCCc----hhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcC
Q 044542          143 NDHGSVNLN-----------------NDGAFDYVHTESVS----LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQ  201 (465)
Q Consensus       143 ~~~~~~~~~-----------------~~~~~DiI~~~~~~----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~  201 (465)
                      .....|...                 ....|| |++.+.+    ++.....+.| ++..+|-.....   ++........
T Consensus       110 ~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~-v~vDt~~~~~~~pl~~~~~~~-v~~yvH~p~~~~---dm~~~v~~~~  184 (463)
T PLN02949        110 IEEETYPRFTMIGQSLGSVYLAWEALCKFTPL-YFFDTSGYAFTYPLARLFGCK-VVCYTHYPTISS---DMISRVRDRS  184 (463)
T ss_pred             cccccCCceehHHHHHHHHHHHHHHHHhcCCC-EEEeCCCcccHHHHHHhcCCc-EEEEEeCCcchH---HHHHHHhhcc
Confidence            111222221                 234555 5554432    2222222556 999999643221   1111110000


Q ss_pred             ------CC-CCC---CchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc
Q 044542          202 ------NG-VLP---GSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE  271 (465)
Q Consensus       202 ------~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~  271 (465)
                            .. ...   ...+.++......+ +....+.+|.++++|++.++.+.+.++. ++++.+++||+|.+.+...+.
T Consensus       185 ~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l-~~~~~~~ad~ii~nS~~t~~~l~~~~~~-~~~i~vvyp~vd~~~~~~~~~  262 (463)
T PLN02949        185 SMYNNDASIARSFWLSTCKILYYRAFAWM-YGLVGRCAHLAMVNSSWTKSHIEALWRI-PERIKRVYPPCDTSGLQALPL  262 (463)
T ss_pred             cccCccchhhccchhHHHHHHHHHHHHHH-HHHHcCCCCEEEECCHHHHHHHHHHcCC-CCCeEEEcCCCCHHHcccCCc
Confidence                  00 000   11112222222111 2244588999999999999999887665 458899999999765532211


Q ss_pred             cCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhc----CCCeEEEEEeCCcc---h---hHHHH----hc
Q 044542          272 AGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRD----HPGVYLLVAGTGPW---G---RRYAE----LG  337 (465)
Q Consensus       272 ~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~----~~~~~l~ivG~g~~---~---~~~~~----l~  337 (465)
                      ..         +.++ ..++++||+.++||++.+++|++++.++    .++++|+|+|++..   .   +++++    ++
T Consensus       263 ~~---------~~~~-~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~  332 (463)
T PLN02949        263 ER---------SEDP-PYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELG  332 (463)
T ss_pred             cc---------cCCC-CEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcC
Confidence            00         1122 4566999999999999999999987653    47899999998642   1   22332    32


Q ss_pred             --CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeee---CCceEEeCCCHH
Q 044542          338 --QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN---EELGYTFSPNVK  412 (465)
Q Consensus       338 --~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~---~~~G~l~~~d~~  412 (465)
                        ++|.|+|+++.+++.++|+.||++++|+.. |+||++++|||++|+|||+++.||..++++.+   +.+|++++ |++
T Consensus       333 L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~-E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~-~~~  410 (463)
T PLN02949        333 LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMID-EHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT-TVE  410 (463)
T ss_pred             CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcc-CCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC-CHH
Confidence              789999999999999999999999999965 99999999999999999999999876577765   56899886 999


Q ss_pred             HHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542          413 SFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       413 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                      +++++|.++++++++.+++|++++++++.+ |||+++++++.+.+++++++
T Consensus       411 ~la~ai~~ll~~~~~~r~~m~~~ar~~~~~-FS~e~~~~~~~~~i~~l~~~  460 (463)
T PLN02949        411 EYADAILEVLRMRETERLEIAAAARKRANR-FSEQRFNEDFKDAIRPILNS  460 (463)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHhh
Confidence            999999999996578889999999999955 99999999999999988764

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=4.4e-38  Score=303.51  Aligned_cols=327  Identities=24%  Similarity=0.329  Sum_probs=253.4

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc--ccCCcceEEEeecCCCccc-------cC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND--VHQGNLHVHFAANDHGSVN-------LN  151 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~-------~~  151 (465)
                      ||+++++.||+     |.++++.+++++|.++||+|++++..........  .......+.+.......+.       ..
T Consensus         1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (355)
T cd03799           1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLAREL   75 (355)
T ss_pred             CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            79999999863     3688999999999999999999998765432211  1111111111100000010       11


Q ss_pred             CCCCCcEEEecCCc---hhHHhh---hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          152 NDGAFDYVHTESVS---LPHWRA---KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       152 ~~~~~DiI~~~~~~---~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                      ++.++|+||+|...   ...++.   .+.| ++.+.|+....       ...             ..       ..+...
T Consensus        76 ~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~-------------~~-------~~~~~~  127 (355)
T cd03799          76 RRLGIDHIHAHFGTTPATVAMLASRLGGIP-YSFTAHGKDIF-------RSP-------------DA-------IDLDEK  127 (355)
T ss_pred             HhcCCCEEEECCCCchHHHHHHHHHhcCCC-EEEEEeccccc-------ccC-------------ch-------HHHHHH
Confidence            46789999998652   222222   1355 88888864211       000             00       112256


Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHH
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLL  305 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~l  305 (465)
                      ++.+|.++++|+..++.+.+.++.+..++.++|||+|.+.+.+...         . ..++++.++++|++.+.||++.+
T Consensus       128 ~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~---------~-~~~~~~~i~~~g~~~~~k~~~~l  197 (355)
T cd03799         128 LARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPP---------P-PPGEPLRILSVGRLVEKKGLDYL  197 (355)
T ss_pred             HhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccc---------c-ccCCCeEEEEEeeeccccCHHHH
Confidence            7899999999999999999977888899999999999887755430         0 11334788899999999999999


Q ss_pred             HHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecccCC-----CCCcHH
Q 044542          306 YEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPTLRP-----QGLDLT  374 (465)
Q Consensus       306 l~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~-----eg~~~~  374 (465)
                      ++++..+.+++++++++++|.++..+.+++.      .++|.+.|+++.+++..+|+.||++++||..+     ||+|++
T Consensus       198 ~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~  277 (355)
T cd03799         198 LEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVV  277 (355)
T ss_pred             HHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHH
Confidence            9999999888889999999998876655442      37899999999999999999999999999743     999999


Q ss_pred             HHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          375 LIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       375 ~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      ++|||++|+|||+++.++.+ +++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++.++++|||+.++++
T Consensus       278 ~~Ea~a~G~Pvi~~~~~~~~-~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~  354 (355)
T cd03799         278 LMEAMAMGLPVISTDVSGIP-ELVEDGETGLLVPPGDPEALADAIERLLDD-PELRREMGEAGRARVEEEFDIRKQAAR  354 (355)
T ss_pred             HHHHHHcCCCEEecCCCCcc-hhhhCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence            99999999999999999987 88888889999998 999999999999999 888999999999999999999999875

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.2e-37  Score=298.00  Aligned_cols=349  Identities=26%  Similarity=0.402  Sum_probs=261.2

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEe--ecCCCc--c-------c
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFA--ANDHGS--V-------N  149 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~--~-------~  149 (465)
                      ||++++..||  |..||.+..+..++++|.+.||+|++++.....................  ......  +       .
T Consensus         1 kil~~~~~~~--p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
T cd03817           1 KIGIFTDTYL--PQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALII   78 (374)
T ss_pred             CeeEeehhcc--CCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHH
Confidence            6999999887  4779999999999999999999999999876544332211111111100  000000  0       1


Q ss_pred             cCCCCCCcEEEecCCchhHH------hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH
Q 044542          150 LNNDGAFDYVHTESVSLPHW------RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI  223 (465)
Q Consensus       150 ~~~~~~~DiI~~~~~~~~~~------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (465)
                      ..+..+||+||++.......      ...++| ++.+.|+.+....+......          .   .......+ ..++
T Consensus        79 ~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~-~~~~  143 (374)
T cd03817          79 ILKELGPDIVHTHTPFSLGLLGLRVARKLGIP-VVATYHTMYEDYTHYVPLGR----------L---LARAVVRR-KLSR  143 (374)
T ss_pred             HHhhcCCCEEEECCchhhhhHHHHHHHHcCCC-EEEEecCCHHHHHHHHhccc----------c---hhHHHHHH-HHHH
Confidence            12678999999987532211      123567 99999987653222111000          0   01111110 2234


Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP  303 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~  303 (465)
                      ..++.+|.++++|+..++.+.+ ++. ..++.++|||+|...+.+....  ..+++++..++. ++++++|++.+.||++
T Consensus       144 ~~~~~~d~i~~~s~~~~~~~~~-~~~-~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~i~~~G~~~~~k~~~  218 (374)
T cd03817         144 RFYNRCDAVIAPSEKIADLLRE-YGV-KRPIEVIPTGIDLDRFEPVDGD--DERRKLGIPEDE-PVLLYVGRLAKEKNID  218 (374)
T ss_pred             HHhhhCCEEEeccHHHHHHHHh-cCC-CCceEEcCCccchhccCccchh--HHHHhcCCCCCC-eEEEEEeeeecccCHH
Confidence            6788999999999999998887 554 3569999999998877654332  224455555444 7888999999999999


Q ss_pred             HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHH
Q 044542          304 LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIE  377 (465)
Q Consensus       304 ~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~E  377 (465)
                      .++++++.+.+++++++++++|+|+..+.++++    +  ++|.++|+++++++..+|+.||++++||.. |++|++++|
T Consensus       219 ~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~-e~~~~~~~E  297 (374)
T cd03817         219 FLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTT-ETQGLVLLE  297 (374)
T ss_pred             HHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccc-cCcChHHHH
Confidence            999999999888889999999998877666553    2  799999999999999999999999999975 999999999


Q ss_pred             HHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 044542          378 AMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERF  456 (465)
Q Consensus       378 Ama~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~  456 (465)
                      ||++|+|||+++.++.. +++.++++|+++++ +. +++++|.+++++ ++.++++++++++.+++.+    .++++.++
T Consensus       298 a~~~g~PvI~~~~~~~~-~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~  370 (374)
T cd03817         298 AMAAGLPVVAVDAPGLP-DLVADGENGFLFPPGDE-ALAEALLRLLQD-PELRRRLSKNAEESAEKFS----FAKKVEKL  370 (374)
T ss_pred             HHHcCCcEEEeCCCChh-hheecCceeEEeCCCCH-HHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence            99999999999999998 89999999999998 55 999999999999 8888999999999998854    66777777


Q ss_pred             HHH
Q 044542          457 FLR  459 (465)
Q Consensus       457 ~~~  459 (465)
                      |++
T Consensus       371 ~~~  373 (374)
T cd03817         371 YEE  373 (374)
T ss_pred             Hhc
Confidence            765

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-37  Score=303.29  Aligned_cols=346  Identities=16%  Similarity=0.221  Sum_probs=243.9

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC-Ccc---------
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH-GSV---------  148 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---------  148 (465)
                      +.||++++...      +|.+.++..+++.|+++||+|++++..............+..++...... ...         
T Consensus         3 ~~~~~~~~~~~------~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   76 (415)
T cd03816           3 RKRVCVLVLGD------IGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAP   76 (415)
T ss_pred             ccEEEEEEecc------cCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCccccccchHHHHHH
Confidence            44788888642      55667778899999999999999998754322211223344444443332 010         


Q ss_pred             --------c----cCCCCCCcEEEecCCch-----hHHh---hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCc
Q 044542          149 --------N----LNNDGAFDYVHTESVSL-----PHWR---AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGS  208 (465)
Q Consensus       149 --------~----~~~~~~~DiI~~~~~~~-----~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (465)
                              .    ..+..+||+||+|....     ..++   ..+.| +++++|+.+........         . ....
T Consensus        77 ~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~-~V~~~h~~~~~~~~~~~---------~-~~~~  145 (415)
T cd03816          77 LKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTK-LIIDWHNYGYTILALKL---------G-ENHP  145 (415)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCe-EEEEcCCchHHHHhccc---------C-CCCH
Confidence                    0    11456899999986421     1221   12456 99999987532111000         0 0000


Q ss_pred             hhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCc--ccc---------
Q 044542          209 MTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGV--RFP---------  277 (465)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~--~~r---------  277 (465)
                      ...+..++     ++..++.+|.++++|+.+++.+.+ ++.+++++.+||||. ...|.+.+....  .+.         
T Consensus       146 ~~~~~~~~-----e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~~~  218 (415)
T cd03816         146 LVRLAKWY-----EKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAKTFLTR  218 (415)
T ss_pred             HHHHHHHH-----HHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCC-HHHceeCcHHHHHHHHHhcccccccc
Confidence            01122222     235678999999999999999988 788899999999995 445554332110  010         


Q ss_pred             ----cccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhh------cCCCeEEEEEeCCcchhHHHHh----c-CCeEE
Q 044542          278 ----EKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITR------DHPGVYLLVAGTGPWGRRYAEL----G-QNVKV  342 (465)
Q Consensus       278 ----~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~------~~~~~~l~ivG~g~~~~~~~~l----~-~~V~~  342 (465)
                          ...++..++..+++++||+.+.||++.+++|++.+++      .+|+++|+|+|+|+.++.++++    + +++.+
T Consensus       219 ~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~  298 (415)
T cd03816         219 ELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTI  298 (415)
T ss_pred             ccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEE
Confidence                0122334445677789999999999999999999875      2478999999999887666544    3 55665


Q ss_pred             -cCCCChhHHHHHHHhcCeEEecc--cCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHH
Q 044542          343 -LGALEAHQLSEFYNALDVFVNPT--LRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALE  419 (465)
Q Consensus       343 -~g~v~~~~~~~~~~~aDv~v~ps--~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~  419 (465)
                       .|+++.+++..+|++||+++.|+  ..+|++|++++|||+||+|||+++.++.. |++.++.+|++++ |+++++++|.
T Consensus       299 ~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~-eiv~~~~~G~lv~-d~~~la~~i~  376 (415)
T cd03816         299 RTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCID-ELVKHGENGLVFG-DSEELAEQLI  376 (415)
T ss_pred             EcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHH-HHhcCCCCEEEEC-CHHHHHHHHH
Confidence             47899999999999999999753  23478999999999999999999999988 8999999999996 9999999999


Q ss_pred             HHHhC--ChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          420 LVIRD--GPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       420 ~ll~~--~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      +++++  +++.+++|++++++..+.  +|++..++
T Consensus       377 ~ll~~~~~~~~~~~m~~~~~~~~~~--~~~~~~~~  409 (415)
T cd03816         377 DLLSNFPNRGKLNSLKKGAQEESEL--RWDENWDR  409 (415)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHhhhc--CHHHHHHH
Confidence            99998  378899999999998844  56655444

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5e-37  Score=297.08  Aligned_cols=335  Identities=22%  Similarity=0.246  Sum_probs=247.2

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCc----cccCCCCCC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGS----VNLNNDGAF  156 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~  156 (465)
                      ||+++++..|   ..||+++++..++++|.+.||+|.+++...........................    ....+..+|
T Consensus         1 kI~~v~~~~~---~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (366)
T cd03822           1 RIALVSPYPP---RKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGP   77 (366)
T ss_pred             CeEEecCCCC---CCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCC
Confidence            7999988653   579999999999999999999999999776443322211110111111111111    112267899


Q ss_pred             cEEEecCC------chhHHhh-----hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          157 DYVHTESV------SLPHWRA-----KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       157 DiI~~~~~------~~~~~~~-----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                      |+||++.+      .......     .+.| ++.++|+....            ..        ......+.     ...
T Consensus        78 dii~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~------------~~--------~~~~~~~~-----~~~  131 (366)
T cd03822          78 DVVVIQHEYGIFGGEAGLYLLLLLRGLGIP-VVVTLHTVLLH------------EP--------RPGDRALL-----RLL  131 (366)
T ss_pred             CEEEEeeccccccchhhHHHHHHHhhcCCC-EEEEEecCCcc------------cc--------chhhhHHH-----HHH
Confidence            99999762      1111111     4556 99999985100            00        01111111     255


Q ss_pred             hcccCEEEEeC-hhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHH
Q 044542          226 FSSYNQHICIS-NSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPL  304 (465)
Q Consensus       226 ~~~~d~ii~~S-~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~  304 (465)
                      ++.+|.++++| +..++.+.. .  ..+++.++|||+|...+......     ++.....+ .++++++|++.+.||++.
T Consensus       132 ~~~~d~ii~~s~~~~~~~~~~-~--~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~-~~~i~~~G~~~~~K~~~~  202 (366)
T cd03822         132 LRRADAVIVMSSELLRALLLR-A--YPEKIAVIPHGVPDPPAEPPESL-----KALGGLDG-RPVLLTFGLLRPYKGLEL  202 (366)
T ss_pred             HhcCCEEEEeeHHHHHHHHhh-c--CCCcEEEeCCCCcCcccCCchhh-----HhhcCCCC-CeEEEEEeeccCCCCHHH
Confidence            78999999996 333433333 1  14799999999998766543221     22222333 378889999999999999


Q ss_pred             HHHHHHHhhhcCCCeEEEEEeCCcchhH---------HHHhc--CCeEEcCC-CChhHHHHHHHhcCeEEecccCCC--C
Q 044542          305 LYEAFSSITRDHPGVYLLVAGTGPWGRR---------YAELG--QNVKVLGA-LEAHQLSEFYNALDVFVNPTLRPQ--G  370 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~---------~~~l~--~~V~~~g~-v~~~~~~~~~~~aDv~v~ps~~~e--g  370 (465)
                      +++|++.+.+++++++|+++|++.....         +++++  ++|.++|. ++.+++.++|+.||++++||.. |  +
T Consensus       203 ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~-e~~~  281 (366)
T cd03822         203 LLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRS-ADQT  281 (366)
T ss_pred             HHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccc-cccc
Confidence            9999999998889999999998654221         34444  89999987 8999999999999999999975 8  9


Q ss_pred             CcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHH
Q 044542          371 LDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKM  449 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  449 (465)
                      +|++++|||++|+|||+++.++ . +.+.++.+|+++++ |+++++++|.+++++ ++.+.++++++++++++ |||+++
T Consensus       282 ~~~~~~Ea~a~G~PvI~~~~~~-~-~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~-~s~~~~  357 (366)
T cd03822         282 QSGVLAYAIGFGKPVISTPVGH-A-EEVLDGGTGLLVPPGDPAALAEAIRRLLAD-PELAQALRARAREYARA-MSWERV  357 (366)
T ss_pred             cchHHHHHHHcCCCEEecCCCC-h-heeeeCCCcEEEcCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHhh-CCHHHH
Confidence            9999999999999999999999 5 66778889999998 999999999999998 88999999999999988 999999


Q ss_pred             HHHHHHHHH
Q 044542          450 ASAYERFFL  458 (465)
Q Consensus       450 ~~~~~~~~~  458 (465)
                      ++++.++|+
T Consensus       358 ~~~~~~~~~  366 (366)
T cd03822         358 AERYLRLLA  366 (366)
T ss_pred             HHHHHHHhC
Confidence            999999873

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.6e-37  Score=296.28  Aligned_cols=326  Identities=26%  Similarity=0.364  Sum_probs=249.8

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEE----eecCC---C---cc--
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHF----AANDH---G---SV--  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~----~~~~~---~---~~--  148 (465)
                      ||+++++.+|+ ...||+++++..++++|.++||+|++++....................    .....   .   ..  
T Consensus         1 kIl~i~~~~~~-~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (359)
T cd03823           1 RILVVNHLYPP-RSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDY   79 (359)
T ss_pred             CeeEEcccCCc-ccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhc
Confidence            79999999875 467999999999999999999999999987655433321111111111    00000   0   00  


Q ss_pred             ----------ccCCCCCCcEEEecCCchh---H---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhh
Q 044542          149 ----------NLNNDGAFDYVHTESVSLP---H---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTEL  212 (465)
Q Consensus       149 ----------~~~~~~~~DiI~~~~~~~~---~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (465)
                                ...++.+||+||++.....   .   ....++| ++.++|+.+.......                    
T Consensus        80 ~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~-~i~~~hd~~~~~~~~~--------------------  138 (359)
T cd03823          80 DNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIP-IVLTLHDYWLICPRQG--------------------  138 (359)
T ss_pred             cCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCC-EEEEEeeeeeecchhh--------------------
Confidence                      0015679999999975211   1   1223467 9999998542211000                    


Q ss_pred             hhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEE
Q 044542          213 QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGV  292 (465)
Q Consensus       213 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~  292 (465)
                                 ......|.++++|+..++.+.+. +.+..++.+++||+|...+.+...         +.+ ++++++++
T Consensus       139 -----------~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~~~vi~n~~~~~~~~~~~~---------~~~-~~~~~i~~  196 (359)
T cd03823         139 -----------LFKKGGDAVIAPSRFLLDRYVAN-GLFAEKISVIRNGIDLDRAKRPRR---------APP-GGRLRFGF  196 (359)
T ss_pred             -----------hhccCCCEEEEeCHHHHHHHHHc-CCCccceEEecCCcChhhcccccc---------CCC-CCceEEEE
Confidence                       11123399999999999999884 445679999999999887654321         112 33488889


Q ss_pred             eeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHH---hcCCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          293 AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE---LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       293 ~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~---l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      +|++.+.||++.++++++.+.+  ++++|+++|.++.....+.   ..++|.++|+++.+++.++|+.||++++||.+.|
T Consensus       197 ~G~~~~~k~~~~li~~~~~l~~--~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e  274 (359)
T cd03823         197 IGQLTPHKGVDLLLEAFKRLPR--GDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPE  274 (359)
T ss_pred             EecCccccCHHHHHHHHHHHHh--cCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccC
Confidence            9999999999999999999876  6899999999876554433   2489999999999999999999999999997569


Q ss_pred             CCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHH
Q 044542          370 GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATK  448 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  448 (465)
                      |+|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.++++++++++....    ++
T Consensus       275 ~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~----~~  348 (359)
T cd03823         275 NFPLVIREALAAGVPVIASDIGGMA-ELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI----ED  348 (359)
T ss_pred             CCChHHHHHHHCCCCEEECCCCCHH-HHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH----HH
Confidence            9999999999999999999999998 88888889999999 999999999999998 88999999988877643    99


Q ss_pred             HHHHHHHHHH
Q 044542          449 MASAYERFFL  458 (465)
Q Consensus       449 ~~~~~~~~~~  458 (465)
                      ++++++++|+
T Consensus       349 ~~~~~~~~~~  358 (359)
T cd03823         349 QAEEYLKLYR  358 (359)
T ss_pred             HHHHHHHHhh
Confidence            9999999986

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=100.00  E-value=1.8e-38  Score=280.50  Aligned_cols=343  Identities=24%  Similarity=0.313  Sum_probs=261.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccc----------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVN----------  149 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------  149 (465)
                      ++|+++++.|.  |..||.+.+++.|++.|-+.||.|.+++....+...-....++..+.+.+.......          
T Consensus         1 ~~i~mVsdff~--P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~   78 (426)
T KOG1111|consen    1 SRILMVSDFFY--PSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDF   78 (426)
T ss_pred             CcceeeCcccc--cCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccC
Confidence            47899998765  589999999999999999999999999988766544333444455555543321111          


Q ss_pred             -cC----CCCCCcEEEecCCc-------hhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhH
Q 044542          150 -LN----NDGAFDYVHTESVS-------LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMP  217 (465)
Q Consensus       150 -~~----~~~~~DiI~~~~~~-------~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (465)
                       ..    .+++..+||.|+..       +.+....+.. .+++=|..........                  .+.   .
T Consensus        79 Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlk-tVfTdHSlfGfad~~s------------------i~~---n  136 (426)
T KOG1111|consen   79 PLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLK-TVFTDHSLFGFADIGS------------------ILT---N  136 (426)
T ss_pred             cccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCce-EEEeccccccccchhh------------------hhh---c
Confidence             00    46689999999862       2222223444 8888887432211000                  000   0


Q ss_pred             HHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccc
Q 044542          218 RLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLV  297 (465)
Q Consensus       218 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~  297 (465)
                      +.+.  ..+...|++||+|...++...-+-.+++.++.+|||.++.+.|.|++..+         +..+.+.++.++|+.
T Consensus       137 ~ll~--~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~---------~S~~i~~ivv~sRLv  205 (426)
T KOG1111|consen  137 KLLP--LSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADK---------PSADIITIVVASRLV  205 (426)
T ss_pred             ceee--eeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCcccc---------CCCCeeEEEEEeeee
Confidence            1111  34577899999999888866554567889999999999999999966542         234437788999999


Q ss_pred             cccCHHHHHHHHHHhhhcCCCeEEEEEeCCc----chhHHHHh--cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCC
Q 044542          298 RDKGHPLLYEAFSSITRDHPGVYLLVAGTGP----WGRRYAEL--GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL  371 (465)
Q Consensus       298 ~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~----~~~~~~~l--~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~  371 (465)
                      .+||+|.+++++.++-+++|+++|+|+|+||    .++.++++  .++|.++|.++.+++.+.|.+-|+|++||.. |.|
T Consensus       206 yrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlT-Eaf  284 (426)
T KOG1111|consen  206 YRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLT-EAF  284 (426)
T ss_pred             eccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHH-HHH
Confidence            9999999999999999999999999999999    44555544  3999999999999999999999999999985 999


Q ss_pred             cHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          372 DLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       372 ~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      +++++|||+||+|||++++||++ |++.++ .-.+.+++++++++++++.+..-+    ..-....+++.+.|+|+..++
T Consensus       285 c~~ivEAaScGL~VVsTrVGGIp-eVLP~d-~i~~~~~~~~dl~~~v~~ai~~~~----~~p~~~h~~v~~~y~w~dVa~  358 (426)
T KOG1111|consen  285 CMVIVEAASCGLPVVSTRVGGIP-EVLPED-MITLGEPGPDDLVGAVEKAITKLR----TLPLEFHDRVKKMYSWKDVAE  358 (426)
T ss_pred             HHHHHHHHhCCCEEEEeecCCcc-ccCCcc-ceeccCCChHHHHHHHHHHHHHhc----cCchhHHHHHHHhccHHHHHH
Confidence            99999999999999999999999 887766 333444489999999999887621    123455677888999999999


Q ss_pred             HHHHHHHHhcCCC
Q 044542          452 AYERFFLRMKNPY  464 (465)
Q Consensus       452 ~~~~~~~~~~~~~  464 (465)
                      +.+++|.++.+.+
T Consensus       359 rTekvy~r~~~t~  371 (426)
T KOG1111|consen  359 RTEKVYDRAATTS  371 (426)
T ss_pred             HHHHHHHHHhhcc
Confidence            9999999988765

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.7e-37  Score=298.27  Aligned_cols=350  Identities=24%  Similarity=0.276  Sum_probs=261.9

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc------ccCCcceEEEeecCC-Ccc-----
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND------VHQGNLHVHFAANDH-GSV-----  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~------~~~~~~~v~~~~~~~-~~~-----  148 (465)
                      ||+++++.+|+  ..||.+.++..++++|++.||+|++++..........      .......+....... ...     
T Consensus         1 kIl~i~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (394)
T cd03794           1 KILILSQYFPP--ELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKR   78 (394)
T ss_pred             CEEEEecccCC--ccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccchHHH
Confidence            79999998874  4499999999999999999999999998764443321      111222222222111 100     


Q ss_pred             --ccC------------CCCCCcEEEecCCchh-----HHhhh--cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCC
Q 044542          149 --NLN------------NDGAFDYVHTESVSLP-----HWRAK--MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPG  207 (465)
Q Consensus       149 --~~~------------~~~~~DiI~~~~~~~~-----~~~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~  207 (465)
                        ...            +..+||+||++.+...     .....  ++| +++.+|+.+..........        ... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~~~~--------~~~-  148 (394)
T cd03794          79 LLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAP-FVLEVRDLWPESAVALGLL--------KNG-  148 (394)
T ss_pred             HHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCC-EEEEehhhcchhHHHccCc--------ccc-
Confidence              000            3788999999973211     11122  456 9999998754322111000        000 


Q ss_pred             chhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCc
Q 044542          208 SMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVS  287 (465)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~  287 (465)
                        ..........  +...++.+|.++++|+..++.+. .++.+..++.++|||+|...+.+......  +.+..... ++
T Consensus       149 --~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~-~~  220 (394)
T cd03794         149 --SLLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADES--LRKELGLD-DK  220 (394)
T ss_pred             --chHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhh--hhhccCCC-Cc
Confidence              0111122221  23667899999999999999998 46788899999999999877655432211  22333333 34


Q ss_pred             EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c-CCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G-QNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~-~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      ++++++|++.+.||++.+++|+..+.+. ++++|+++|+|+..+.++++    . ++|.++|+++++++.++|+.||+++
T Consensus       221 ~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i  299 (394)
T cd03794         221 FVVLYAGNIGRAQGLDTLLEAAALLKDR-PDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGL  299 (394)
T ss_pred             EEEEEecCcccccCHHHHHHHHHHHhhc-CCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeE
Confidence            8888999999999999999999999877 79999999998877666552    2 8999999999999999999999999


Q ss_pred             ecccCCCC-----CcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHH
Q 044542          363 NPTLRPQG-----LDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLAC  436 (465)
Q Consensus       363 ~ps~~~eg-----~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~  436 (465)
                      +|+.. |+     +|++++|||++|+|||+++.++.. +.+.++++|+++++ |+++++++|.+++.+ ++.++++++++
T Consensus       300 ~~~~~-~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~  376 (394)
T cd03794         300 VPLKP-GPAFEGVSPSKLFEYMAAGKPVLASVDGESA-ELVEEAGAGLVVPPGDPEALAAAILELLDD-PEERAEMGENG  376 (394)
T ss_pred             EeccC-cccccccCchHHHHHHHCCCcEEEecCCCch-hhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHHHHHHHHHH
Confidence            99975 54     489999999999999999999998 78888889999999 999999999999988 89999999999


Q ss_pred             HHHHHhhCCHHHHHHHHH
Q 044542          437 KEHALSMFTATKMASAYE  454 (465)
Q Consensus       437 ~~~~~~~fs~~~~~~~~~  454 (465)
                      ++++.++|||+.++++|+
T Consensus       377 ~~~~~~~~s~~~~~~~~~  394 (394)
T cd03794         377 RRYVEEKFSREKLAERLL  394 (394)
T ss_pred             HHHHHHhhcHHHHHHhcC
Confidence            999998999999998863

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=100.00  E-value=1.8e-37  Score=298.78  Aligned_cols=329  Identities=16%  Similarity=0.162  Sum_probs=235.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCC--ccc--CCcceEEEeec-CC----Ccc
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHN--DVH--QGNLHVHFAAN-DH----GSV  148 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~--~~~--~~~~~v~~~~~-~~----~~~  148 (465)
                      |||+++++.+|   ..||+++++.+++++|.+.  ||+|.+++.........  ...  .....+..... ..    ...
T Consensus         1 mkI~~~~~~~~---~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   77 (359)
T PRK09922          1 MKIAFIGEAVS---GFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKLSFLRRAKHVYNFS   77 (359)
T ss_pred             CeeEEeccccc---CCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcccccchhhhhcccHHHHHHH
Confidence            89999998763   5699999999999999999  89999998765422111  000  00011111100 00    011


Q ss_pred             ccCCCCCCcEEEecCCchhH--H-hhh--cCCc-EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          149 NLNNDGAFDYVHTESVSLPH--W-RAK--MVPN-VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       149 ~~~~~~~~DiI~~~~~~~~~--~-~~~--~~p~-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                      ...++.+||+||+|+.....  . .++  +.|. ++.+.|.....               .       ... ..      
T Consensus        78 ~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~---------------~-------~~~-~~------  128 (359)
T PRK09922         78 KWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDH---------------K-------KHA-EC------  128 (359)
T ss_pred             HHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccc---------------c-------chh-hh------
Confidence            22277899999999753211  1 111  2331 44444531100               0       000 00      


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccc--ccc
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLV--RDK  300 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~--~~K  300 (465)
                       ..+..+|.++++|+..++.+.+ ++++.+++.++|||+|.+.+......           .+.+.+++++||+.  ++|
T Consensus       129 -~~~~~~d~~i~~S~~~~~~~~~-~~~~~~ki~vi~N~id~~~~~~~~~~-----------~~~~~~i~~~Grl~~~~~k  195 (359)
T PRK09922        129 -KKITCADYHLAISSGIKEQMMA-RGISAQRISVIYNPVEIKTIIIPPPE-----------RDKPAVFLYVGRLKFEGQK  195 (359)
T ss_pred             -hhhhcCCEEEEcCHHHHHHHHH-cCCCHHHEEEEcCCCCHHHccCCCcc-----------cCCCcEEEEEEEEecccCc
Confidence             1136899999999999999987 68888899999999996544321110           12236788999996  469


Q ss_pred             CHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCC--hhHHHHHHHhcCeEEecccCCCCCc
Q 044542          301 GHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALE--AHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       301 g~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~--~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      |++.+++|+..+.   ++++|+++|+|+..+.++++      .++|.|+|+++  .+++.++|+.+|++++||.+ ||||
T Consensus       196 ~~~~l~~a~~~~~---~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~-Egf~  271 (359)
T PRK09922        196 NVKELFDGLSQTT---GEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKF-EGFP  271 (359)
T ss_pred             CHHHHHHHHHhhC---CCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcc-cCcC
Confidence            9999999999874   37999999999887766553      27899999984  37899999999999999986 9999


Q ss_pred             HHHHHHHHcCCeEEecC-CCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542          373 LTLIEAMHCGRTVLTPN-YPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA  450 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~-~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  450 (465)
                      ++++||||||+|||+++ .+|.. |++.++.+|+++++ |+++++++|.+++++ ++.+   ..++......+|+.+...
T Consensus       272 ~~~lEAma~G~Pvv~s~~~~g~~-eiv~~~~~G~lv~~~d~~~la~~i~~l~~~-~~~~---~~~~~~~~~~~~~~~~~~  346 (359)
T PRK09922        272 MTLLEAMSYGIPCISSDCMSGPR-DIIKPGLNGELYTPGNIDEFVGKLNKVISG-EVKY---QHDAIPNSIERFYEVLYF  346 (359)
T ss_pred             hHHHHHHHcCCCEEEeCCCCChH-HHccCCCceEEECCCCHHHHHHHHHHHHhC-cccC---CHHHHHHHHHHhhHHHHH
Confidence            99999999999999999 88877 89999999999998 999999999999999 5533   122333334458889999


Q ss_pred             HHHHHHHHHhcC
Q 044542          451 SAYERFFLRMKN  462 (465)
Q Consensus       451 ~~~~~~~~~~~~  462 (465)
                      +++.++|.++++
T Consensus       347 ~~~~~~~~~~~~  358 (359)
T PRK09922        347 KNLNNALFSKLQ  358 (359)
T ss_pred             HHHHHHHHHHhc
Confidence            999999988765

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-36  Score=296.00  Aligned_cols=349  Identities=14%  Similarity=0.120  Sum_probs=242.0

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCC---------CC--cccCCcceEEE----eec
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKP---------HN--DVHQGNLHVHF----AAN  143 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~---------~~--~~~~~~~~v~~----~~~  143 (465)
                      -|+|++++.   ...||+|+.++..+.+|.+.  ||+|+++|.......         ..  +.......+..    ...
T Consensus         2 ~~~f~hp~~---~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~   78 (419)
T cd03806           2 TVGFFHPYC---NAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLV   78 (419)
T ss_pred             eEEEECCCC---CCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeee
Confidence            478888875   34459999999999999998  899999999876533         11  12222221222    111


Q ss_pred             CCCccccC-----------------CCCCCcEEEecC-CchhHHh---hhcCCcEEEEecchhHHHHhhhhhhhhh-hc-
Q 044542          144 DHGSVNLN-----------------NDGAFDYVHTES-VSLPHWR---AKMVPNVAVTWHGIWYEVMHSKLFGELF-SN-  200 (465)
Q Consensus       144 ~~~~~~~~-----------------~~~~~DiI~~~~-~~~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~-~~-  200 (465)
                      ....|...                 ...+|||++.++ +.....+   ..+.| ++..+|- +...  .+...... +. 
T Consensus        79 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~-~i~y~h~-P~~~--~d~l~~~~~~~~  154 (419)
T cd03806          79 EASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCP-VGAYVHY-PTIS--TDMLQKVRSREA  154 (419)
T ss_pred             ccccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCe-EEEEecC-Ccch--HHHHHHHhhccc
Confidence            22223221                 345799998886 3321222   12456 9999992 2110  01111100 00 


Q ss_pred             ----CCCC-CC---CchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCccc
Q 044542          201 ----QNGV-LP---GSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA  272 (465)
Q Consensus       201 ----~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~  272 (465)
                          .... ..   ...+.+++.+... -+...++.+|.++++|++.++.+.+.++. .+++.+|+||+|.+.+.+.+..
T Consensus       155 ~~~~~~~~~~~~~~~~~k~~y~~~~~~-~~~~~~~~aD~ii~~S~~~~~~~~~~~~~-~~~~~vi~~gvd~~~~~~~~~~  232 (419)
T cd03806         155 SYNNSATIARSPVLSKAKLLYYRLFAF-LYGLAGSFADVVMVNSTWTRNHIRSLWKR-NTKPSIVYPPCDVEELLKLPLD  232 (419)
T ss_pred             cccCccchhccchHHHHHHHHHHHHHH-HHHHHhhcCCEEEECCHHHHHHHHHHhCc-CCCcEEEcCCCCHHHhcccccc
Confidence                0000 00   1122222222222 23467899999999999999999987654 3589999999998776543210


Q ss_pred             CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCC-----CeEEEEEeCCcc------hhHHHH----hc
Q 044542          273 GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP-----GVYLLVAGTGPW------GRRYAE----LG  337 (465)
Q Consensus       273 ~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~-----~~~l~ivG~g~~------~~~~~~----l~  337 (465)
                                ..++..+++++||+.+.||++.+++|++.+.+..|     +++|+|+|++..      .+.+++    ++
T Consensus       233 ----------~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~  302 (419)
T cd03806         233 ----------EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELG  302 (419)
T ss_pred             ----------cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhC
Confidence                      01223678899999999999999999999988765     499999998632      223333    22


Q ss_pred             --CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeee---eCCceEEeCCCHH
Q 044542          338 --QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVV---NEELGYTFSPNVK  412 (465)
Q Consensus       338 --~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~---~~~~G~l~~~d~~  412 (465)
                        ++|+|+|.++.+++..+|+.||++++|+.. |+||++++|||+||+|||+++.||..++++.   ++.+|++++ |++
T Consensus       303 l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~-E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~-d~~  380 (419)
T cd03806         303 LEDKVEFVVNAPFEELLEELSTASIGLHTMWN-EHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS-TAE  380 (419)
T ss_pred             CCCeEEEecCCCHHHHHHHHHhCeEEEECCcc-CCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-CHH
Confidence              799999999999999999999999999975 9999999999999999999999876557887   899999987 999


Q ss_pred             HHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          413 SFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       413 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      +++++|.++++++++.++.+ .++++.+.++||++++.+
T Consensus       381 ~la~ai~~ll~~~~~~~~~~-~~~~~~~~~~fs~~~f~~  418 (419)
T cd03806         381 EYAEAIEKILSLSEEERLRI-RRAARSSVKRFSDEEFER  418 (419)
T ss_pred             HHHHHHHHHHhCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence            99999999999845555555 555555777799998754

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>PLN00142 sucrose synthase

Probab=100.00  E-value=5.1e-37  Score=308.81  Aligned_cols=364  Identities=15%  Similarity=0.119  Sum_probs=247.5

Q ss_pred             ceeEEEEeC-CC------CCCCCCChHHHHHHHHH--------HHHHhCCcEE----EEEeCCCCCCCCC------cccC
Q 044542           79 KLKLAVFSK-TW------PIGAAPGGMERHASTLY--------HALAARGHEI----HVFTAPSDRKPHN------DVHQ  133 (465)
Q Consensus        79 ~mkIl~v~~-~~------p~~~~~gG~~~~~~~l~--------~~L~~~G~~V----~v~~~~~~~~~~~------~~~~  133 (465)
                      -|||++++. .+      ..++..||-..++.+++        +.|+++||+|    .|+|....+....      +...
T Consensus       279 ~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~  358 (815)
T PLN00142        279 VFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVS  358 (815)
T ss_pred             hHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCCcccCcceecc
Confidence            379999985 33      23456788877886544        6777889977    4888765433211      1222


Q ss_pred             C--cceEEEeecCCC-----cc-------ccC--------------CCCCCcEEEecCCc--hhHH-h--hhcCCcEEEE
Q 044542          134 G--NLHVHFAANDHG-----SV-------NLN--------------NDGAFDYVHTESVS--LPHW-R--AKMVPNVAVT  180 (465)
Q Consensus       134 ~--~~~v~~~~~~~~-----~~-------~~~--------------~~~~~DiI~~~~~~--~~~~-~--~~~~p~~v~~  180 (465)
                      .  +..+...+..+.     .|       .+.              ...+||+||+|.+.  +.+. +  ..++| .+.+
T Consensus       359 ~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP-~v~T  437 (815)
T PLN00142        359 GTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVT-QCTI  437 (815)
T ss_pred             CCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCC-EEEE
Confidence            2  222222222111     01       111              23469999999762  2222 2  34789 9999


Q ss_pred             ecchhHHHH-hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHH-------HHHH------
Q 044542          181 WHGIWYEVM-HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEV-------LVKI------  246 (465)
Q Consensus       181 ~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~-------~~~~------  246 (465)
                      .|....... +++.+.   ...        ...+....++..+...+..||.||+.|......       +..+      
T Consensus       438 ~HsL~k~K~~~~~~~~---~~~--------e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p  506 (815)
T PLN00142        438 AHALEKTKYPDSDIYW---KKF--------DDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLP  506 (815)
T ss_pred             cccchhhhccccCCcc---ccc--------chhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccc
Confidence            997532211 000000   000        011222223334556788999999988766532       1121      


Q ss_pred             ------hCC--CCCCEEEecCCCCCCCccCCcccCc-----------------ccccccCCC-CCCcEEEEEeecccccc
Q 044542          247 ------YQL--PQRNVHVILNGVDETKFVHDPEAGV-----------------RFPEKLGVP-ANVSLVMGVAGRLVRDK  300 (465)
Q Consensus       247 ------~~~--~~~ki~vi~ngvd~~~~~~~~~~~~-----------------~~r~~~g~~-~~~~~~l~~~Grl~~~K  300 (465)
                            .|+  ...++.+||+|+|...|.|......                 ..++.+|+. +.++.+|+++||+.+.|
T Consensus       507 ~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~K  586 (815)
T PLN00142        507 GLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVK  586 (815)
T ss_pred             hhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccC
Confidence                  122  2559999999999998875332111                 123345652 22235677999999999


Q ss_pred             CHHHHHHHHHHhhhcCCCeEEEEEeCCc------chh------HH----HHhc--CCeEEcCCC----ChhHHHHHHH-h
Q 044542          301 GHPLLYEAFSSITRDHPGVYLLVAGTGP------WGR------RY----AELG--QNVKVLGAL----EAHQLSEFYN-A  357 (465)
Q Consensus       301 g~~~ll~a~~~l~~~~~~~~l~ivG~g~------~~~------~~----~~l~--~~V~~~g~v----~~~~~~~~~~-~  357 (465)
                      |++.+++|+.++.+..++++|+|+|+|.      ..+      .+    ++++  ++|.|+|..    +.+++..+++ +
T Consensus       587 Gid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iada  666 (815)
T PLN00142        587 NLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADT  666 (815)
T ss_pred             CHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhh
Confidence            9999999999987766789999999862      111      12    2222  789999854    3367777776 4


Q ss_pred             cCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHH----hCChHHHHHH
Q 044542          358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVI----RDGPKVLQRK  432 (465)
Q Consensus       358 aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll----~~~~~~~~~~  432 (465)
                      +|++++||.+ |+||++++|||+||+|||+|+.||.+ |++.++.+|+++++ |+++++++|.+++    .| ++.+++|
T Consensus       667 aDVfVlPS~~-EgFGLvvLEAMA~GlPVVATdvGG~~-EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D-p~lr~~m  743 (815)
T PLN00142        667 KGAFVQPALY-EAFGLTVVEAMTCGLPTFATCQGGPA-EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED-PSYWNKI  743 (815)
T ss_pred             CCEEEeCCcc-cCCCHHHHHHHHcCCCEEEcCCCCHH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC-HHHHHHH
Confidence            7999999986 99999999999999999999999998 99999999999999 9999999987754    56 8999999


Q ss_pred             HHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          433 GLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       433 ~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      +++|++++.++|||+.++++++++.
T Consensus       744 g~~Ar~rv~e~FSWe~~A~rll~L~  768 (815)
T PLN00142        744 SDAGLQRIYECYTWKIYAERLLTLG  768 (815)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            9999999999999999999999875

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=4.2e-36  Score=288.79  Aligned_cols=337  Identities=16%  Similarity=0.131  Sum_probs=232.9

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeCCCCCCCC---------------Cc--c-cCCcceE
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTAPSDRKPH---------------ND--V-HQGNLHV  138 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~~~---------------~~--~-~~~~~~v  138 (465)
                      ++|||++++..|+  |..+|.......++..|+++| |+|+|+.+.......               .+  + ......+
T Consensus         3 ~~mrIaivTdt~l--P~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v   80 (462)
T PLN02846          3 KKQHIAIFTTASL--PWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERI   80 (462)
T ss_pred             CCCEEEEEEcCCC--CCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeE
Confidence            4699999999987  589999999999999999999 899999986432110               00  0 0001111


Q ss_pred             -EEe--e--cCCCcc--------------ccCCCCCCcEEEecCCchhHHh-------hhcCCcEEEEecchhHHHHhhh
Q 044542          139 -HFA--A--NDHGSV--------------NLNNDGAFDYVHTESVSLPHWR-------AKMVPNVAVTWHGIWYEVMHSK  192 (465)
Q Consensus       139 -~~~--~--~~~~~~--------------~~~~~~~~DiI~~~~~~~~~~~-------~~~~p~~v~~~h~~~~~~~~~~  192 (465)
                       .+.  +  ..++.+              ...++.+|||||++++....|.       .+..+ ++.++|.....+.+. 
T Consensus        81 ~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~-  158 (462)
T PLN02846         81 SFLPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIGIVHTNYLEYVKR-  158 (462)
T ss_pred             EEecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEEEECCChHHHHHH-
Confidence             111  1  111110              1116789999999998655554       11234 777899744322211 


Q ss_pred             hhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCccc
Q 044542          193 LFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA  272 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~  272 (465)
                       +..         ......+.+.+.+...  +  ..+|.++++|+...+ +.+       .+...++|||.+.|.+....
T Consensus       159 -~~~---------g~~~~~l~~~~~~~~~--r--~~~d~vi~pS~~~~~-l~~-------~~i~~v~GVd~~~f~~~~~~  216 (462)
T PLN02846        159 -EKN---------GRVKAFLLKYINSWVV--D--IYCHKVIRLSAATQD-YPR-------SIICNVHGVNPKFLEIGKLK  216 (462)
T ss_pred             -hcc---------chHHHHHHHHHHHHHH--H--HhcCEEEccCHHHHH-Hhh-------CEEecCceechhhcCCCccc
Confidence             000         0001122222222221  1  237999999986554 332       24445689999988765432


Q ss_pred             CcccccccCCCCCC-cEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc-----CCeEEcCCC
Q 044542          273 GVRFPEKLGVPANV-SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG-----QNVKVLGAL  346 (465)
Q Consensus       273 ~~~~r~~~g~~~~~-~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~-----~~V~~~g~v  346 (465)
                         .++.++ +.+. ..+++|+||+..+||++.+++|++++.+..++++|+|+|+|+.++.++++.     +...|.|..
T Consensus       217 ---~~~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~  292 (462)
T PLN02846        217 ---LEQQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRD  292 (462)
T ss_pred             ---HhhhcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCC
Confidence               222222 2222 235779999999999999999999998877899999999999988877654     223477765


Q ss_pred             ChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCCh
Q 044542          347 EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGP  426 (465)
Q Consensus       347 ~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~  426 (465)
                      +   ..++|+.+|++|+||.. |++|++++||||||+|||+++.++ . +++.++.+|++++ |.+++++++.+++.+++
T Consensus       293 ~---~~~~~~~~DvFv~pS~~-Et~g~v~lEAmA~G~PVVa~~~~~-~-~~v~~~~ng~~~~-~~~~~a~ai~~~l~~~~  365 (462)
T PLN02846        293 H---ADPLFHDYKVFLNPSTT-DVVCTTTAEALAMGKIVVCANHPS-N-EFFKQFPNCRTYD-DGKGFVRATLKALAEEP  365 (462)
T ss_pred             C---HHHHHHhCCEEEECCCc-ccchHHHHHHHHcCCcEEEecCCC-c-ceeecCCceEecC-CHHHHHHHHHHHHccCc
Confidence            3   34799999999999986 999999999999999999999997 4 8899999999996 89999999999998733


Q ss_pred             HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          427 KVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       427 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +   .++.+++    +.|||+..+++++++|+
T Consensus       366 ~---~~~~~a~----~~~SWe~~~~~l~~~~~  390 (462)
T PLN02846        366 A---PLTDAQR----HELSWEAATERFLRVAD  390 (462)
T ss_pred             h---hHHHHHH----HhCCHHHHHHHHHHHhc
Confidence            2   2233322    36999999999999986

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.4e-37  Score=297.70  Aligned_cols=328  Identities=20%  Similarity=0.262  Sum_probs=240.1

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cccCCcceEEEeecC-CCcccc-------C
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DVHQGNLHVHFAAND-HGSVNL-------N  151 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~v~~~~~~-~~~~~~-------~  151 (465)
                      ||+++++.+    ..||.++++.+++++|.+.||+|++++......... .....+..+...... ...+.+       .
T Consensus         1 kIl~~~~~~----~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (358)
T cd03812           1 KILHIVGTM----NRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPARKKNPLKYFKKLYKLI   76 (358)
T ss_pred             CEEEEeCCC----CCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecCCCccHHHHHHHHHHHH
Confidence            799999875    579999999999999999999999999876543211 122222222222211 111111       1


Q ss_pred             CCCCCcEEEecCCch---hHHhh--hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhh
Q 044542          152 NDGAFDYVHTESVSL---PHWRA--KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF  226 (465)
Q Consensus       152 ~~~~~DiI~~~~~~~---~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (465)
                      ++.+||+||+|....   ...+.  .+.|..+...|+......             .    .......    ...+..+.
T Consensus        77 ~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------------~----~~~~~~~----~~~~~~~~  135 (358)
T cd03812          77 KKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHD-------------K----KKKILKY----KVLRKLIN  135 (358)
T ss_pred             hcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccc-------------c----cchhhHH----HHHHHHHH
Confidence            678999999998632   12222  234535667776432100             0    0000000    11122556


Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY  306 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll  306 (465)
                      +.++.++++|+...+.+.+.  .+..++.+||||+|.+.+.+....+.. +++++...+. ++++++||+.+.||++.++
T Consensus       136 ~~~~~~i~~s~~~~~~~~~~--~~~~~~~vi~ngvd~~~~~~~~~~~~~-~~~~~~~~~~-~~i~~vGr~~~~Kg~~~li  211 (358)
T cd03812         136 RLATDYLACSEEAGKWLFGK--VKNKKFKVIPNGIDLEKFIFNEEIRKK-RRELGILEDK-FVIGHVGRFSEQKNHEFLI  211 (358)
T ss_pred             hcCCEEEEcCHHHHHHHHhC--CCcccEEEEeccCcHHHcCCCchhhhH-HHHcCCCCCC-EEEEEEeccccccChHHHH
Confidence            88999999999999998775  567899999999999877654432222 4445555554 8888999999999999999


Q ss_pred             HHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHH
Q 044542          307 EAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMH  380 (465)
Q Consensus       307 ~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma  380 (465)
                      +|+..+.+++++++++|+|+|+..+.+++.    +  ++|.++|+  .+++.++|+.||++++||.. ||+|++++|||+
T Consensus       212 ~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~-E~~~~~~lEAma  288 (358)
T cd03812         212 EIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSLY-EGLPLVLIEAQA  288 (358)
T ss_pred             HHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEecccc-cCCCHHHHHHHH
Confidence            999999988899999999999876655443    2  78999999  47899999999999999976 999999999999


Q ss_pred             cCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Q 044542          381 CGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSM  443 (465)
Q Consensus       381 ~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~  443 (465)
                      +|+|||+++.||.+ +++.+ ..|++..+ ++++++++|.+++++ ++.++.++..++......
T Consensus       289 ~G~PvI~s~~~~~~-~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~-~~~~~~~~~~~~~~~~~~  349 (358)
T cd03812         289 SGLPCILSDTITKE-VDLTD-LVKFLSLDESPEIWAEEILKLKSE-DRRERSSESIKKKGLDAD  349 (358)
T ss_pred             hCCCEEEEcCCchh-hhhcc-CccEEeCCCCHHHHHHHHHHHHhC-cchhhhhhhhhhccchhh
Confidence            99999999999998 77777 45666665 789999999999999 788888877776665543

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.5e-36  Score=286.41  Aligned_cols=324  Identities=23%  Similarity=0.305  Sum_probs=244.8

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC------------Ccc
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------------GSV  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~  148 (465)
                      ||++++..+.   ..||.++.+..++++|.+.||+|++++.............. ..+.......            ...
T Consensus         1 kI~i~~~~~~---~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   76 (348)
T cd03820           1 KILFVIPSLG---NAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPK-IKVIDLGDKRDSKLLARFKKLRRLR   76 (348)
T ss_pred             CeEEEecccc---CCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCCc-cceeecccccccchhccccchHHHH
Confidence            6899998763   27999999999999999999999999988765111111111 1111111110            011


Q ss_pred             ccCCCCCCcEEEecCCc---hhHHhhhcC-CcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHH
Q 044542          149 NLNNDGAFDYVHTESVS---LPHWRAKMV-PNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIR  224 (465)
Q Consensus       149 ~~~~~~~~DiI~~~~~~---~~~~~~~~~-p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (465)
                      ...+..+||+|+++...   ......... | ++...|+........                   .....     .+..
T Consensus        77 ~~l~~~~~d~i~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~-------------------~~~~~-----~~~~  131 (348)
T cd03820          77 KLLKNNKPDVVISFLTSLLTFLASLGLKIVK-LIVSEHNSPDAYKKR-------------------LRRLL-----LRRL  131 (348)
T ss_pred             HhhcccCCCEEEEcCchHHHHHHHHhhcccc-EEEecCCCccchhhh-------------------hHHHH-----HHHH
Confidence            11166899999999864   222333343 5 888888753221100                   00000     2336


Q ss_pred             hhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHH
Q 044542          225 FFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPL  304 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~  304 (465)
                      .++.+|.++++|+..+..   ....+..++.++|||++...+...            .+ ++...++++|++.+.||++.
T Consensus       132 ~~~~~d~ii~~s~~~~~~---~~~~~~~~~~vi~~~~~~~~~~~~------------~~-~~~~~i~~~g~~~~~K~~~~  195 (348)
T cd03820         132 LYRRADAVVVLTEEDRAL---YYKKFNKNVVVIPNPLPFPPEEPS------------SD-LKSKRILAVGRLVPQKGFDL  195 (348)
T ss_pred             HHhcCCEEEEeCHHHHHH---hhccCCCCeEEecCCcChhhcccc------------CC-CCCcEEEEEEeeccccCHHH
Confidence            788999999999998822   234567899999999998765433            01 22367789999999999999


Q ss_pred             HHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHH
Q 044542          305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA  378 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EA  378 (465)
                      ++++++.+.+..++++|+++|+++..+.++++    +  ++|.+.|.  .+++.++|+.||++++||.. ||+|++++||
T Consensus       196 l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~-e~~~~~~~Ea  272 (348)
T cd03820         196 LIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRF-EGFPMVLLEA  272 (348)
T ss_pred             HHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccc-cccCHHHHHH
Confidence            99999999888899999999998877665542    2  78999998  48999999999999999986 9999999999


Q ss_pred             HHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          379 MHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       379 ma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                      |++|+|||+++.++..++++.++.+|+++++ |+++++++|.+++++ ++.++++++++++.+ +.|+|++++++|.
T Consensus       273 ~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  347 (348)
T cd03820         273 MAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED-EELRKRMGANARESA-ERFSIENIIKQWE  347 (348)
T ss_pred             HHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH-HHhCHHHHHHHhc
Confidence            9999999999987655477777779999998 999999999999998 999999999997766 4599999999885

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.4e-36  Score=291.30  Aligned_cols=344  Identities=28%  Similarity=0.412  Sum_probs=262.4

Q ss_pred             EEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCc-------ceEEEe-ecCCCc------
Q 044542           82 LAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGN-------LHVHFA-ANDHGS------  147 (465)
Q Consensus        82 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~-------~~v~~~-~~~~~~------  147 (465)
                      |+++++.+|+ ...||.+.++..++++|.+.||+|++++...............       ...... ......      
T Consensus         1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (377)
T cd03798           1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLA   79 (377)
T ss_pred             CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHH
Confidence            6888988874 2379999999999999999999999999876554333211100       000000 000000      


Q ss_pred             ----cccCC--CCCCcEEEecCCchhHH----hhh--cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542          148 ----VNLNN--DGAFDYVHTESVSLPHW----RAK--MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA  215 (465)
Q Consensus       148 ----~~~~~--~~~~DiI~~~~~~~~~~----~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (465)
                          ....+  ..++|+||++.......    +.+  ++| ++...|+.........                  .   .
T Consensus        80 ~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~------------------~---~  137 (377)
T cd03798          80 ARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIP-LVVTLHGSDVNLLPRK------------------R---L  137 (377)
T ss_pred             HHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCC-EEEEeecchhcccCch------------------h---h
Confidence                00115  88999999996432222    222  346 9999998654311100                  0   1


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeec
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGR  295 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Gr  295 (465)
                      ...  .+...++++|.++++|+..++.+.+.+ .+..++.++|||+|...+.+......   .+.+...+ +++++++|+
T Consensus       138 ~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~i~~~g~  210 (377)
T cd03798         138 LRA--LLRRALRRADAVIAVSEALADELKALG-IDPEKVTVIPNGVDTERFSPADRAEA---RKLGLPED-KKVILFVGR  210 (377)
T ss_pred             HHH--HHHHHHhcCCeEEeCCHHHHHHHHHhc-CCCCceEEcCCCcCcccCCCcchHHH---HhccCCCC-ceEEEEecc
Confidence            111  122667899999999999999999854 67899999999999887765433211   22223333 478889999


Q ss_pred             cccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          296 LVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       296 l~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      +.+.||++.+++++..+.+++++++++++|.++..+.++++      .++|.+.|+++++++.++|+.||++++|+.. |
T Consensus       211 ~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~-~  289 (377)
T cd03798         211 LVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLR-E  289 (377)
T ss_pred             CccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhh-c
Confidence            99999999999999999888889999999998776655443      2799999999999999999999999999986 9


Q ss_pred             CCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHH
Q 044542          370 GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATK  448 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  448 (465)
                      ++|++++|||++|+|||+++.++.. +++.++..|+++++ |+++++++|.+++++ ++.  +++.++++.+.++|+|+.
T Consensus       290 ~~~~~~~Ea~~~G~pvI~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~--~~~~~~~~~~~~~~s~~~  365 (377)
T cd03798         290 GFGLVLLEAMACGLPVVATDVGGIP-EIITDGENGLLVPPGDPEALAEAILRLLAD-PWL--RLGRAARRRVAERFSWEN  365 (377)
T ss_pred             cCChHHHHHHhcCCCEEEecCCChH-HHhcCCcceeEECCCCHHHHHHHHHHHhcC-cHH--HHhHHHHHHHHHHhhHHH
Confidence            9999999999999999999999998 88899989999999 999999999999998 555  788889999999999999


Q ss_pred             HHHHHHHHHHHh
Q 044542          449 MASAYERFFLRM  460 (465)
Q Consensus       449 ~~~~~~~~~~~~  460 (465)
                      +++++.++|+++
T Consensus       366 ~~~~~~~~~~~l  377 (377)
T cd03798         366 VAERLLELYREV  377 (377)
T ss_pred             HHHHHHHHHhhC
Confidence            999999999764

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.4e-35  Score=282.72  Aligned_cols=331  Identities=27%  Similarity=0.372  Sum_probs=251.3

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC---Cccc--------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH---GSVN--------  149 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~--------  149 (465)
                      ||+++++.      .||.+.++..++++|.+.||+|++++.......  .....+..+...+...   ..+.        
T Consensus         1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (359)
T cd03808           1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE--ELEALGVKVIPIPLDRRGINPFKDLKALLRL   72 (359)
T ss_pred             CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc--ccccCCceEEeccccccccChHhHHHHHHHH
Confidence            68899874      489999999999999999999999998765543  1112222222222211   1110        


Q ss_pred             --cCCCCCCcEEEecCCch--hHH-hh--hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          150 --LNNDGAFDYVHTESVSL--PHW-RA--KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       150 --~~~~~~~DiI~~~~~~~--~~~-~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                        ..++.+||+||++....  ... ..  ...+.++...|+..........               .......+     +
T Consensus        73 ~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~~-----~  132 (359)
T cd03808          73 YRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGL---------------KRRLYLLL-----E  132 (359)
T ss_pred             HHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchh---------------HHHHHHHH-----H
Confidence              11678999999986421  111 12  2344488888876433111100               01112222     2


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCC-CCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLP-QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~-~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      +..++.+|.++++|+...+.+.+.+..+ ..++.++++|+|.+.+.+....          ..+++++++++|++.+.||
T Consensus       133 ~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~i~~~G~~~~~k~  202 (359)
T cd03808         133 RLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP----------IPEDDPVFLFVARLLKDKG  202 (359)
T ss_pred             HHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc----------cCCCCcEEEEEeccccccC
Confidence            3567888999999999999999865443 4678888999998776554321          1133478889999999999


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHH-----Hhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHH
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYA-----ELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLT  374 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~-----~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~  374 (465)
                      ++.+++++..+.+++++++|+++|.+......+     ++.  ++|.+.|+.  +++.++|+.||++++||.. ||+|++
T Consensus       203 ~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~i~ps~~-e~~~~~  279 (359)
T cd03808         203 IDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFR--DDVPELLAAADVFVLPSYR-EGLPRV  279 (359)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeecc--ccHHHHHHhccEEEecCcc-cCcchH
Confidence            999999999998878899999999987654433     322  789999994  7999999999999999986 999999


Q ss_pred             HHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542          375 LIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY  453 (465)
Q Consensus       375 ~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  453 (465)
                      ++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++.+ ++.+.++++++++++.++|+|+.+++++
T Consensus       280 ~~Ea~~~G~Pvi~s~~~~~~-~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~  357 (359)
T cd03808         280 LLEAMAMGRPVIATDVPGCR-EAVIDGVNGFLVPPGDAEALADAIERLIED-PELRARMGQAARKRAEEEFDEEIVVKKL  357 (359)
T ss_pred             HHHHHHcCCCEEEecCCCch-hhhhcCcceEEECCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHh
Confidence            99999999999999999998 88888999999998 899999999999998 8999999999999999999999999987


Q ss_pred             H
Q 044542          454 E  454 (465)
Q Consensus       454 ~  454 (465)
                      .
T Consensus       358 ~  358 (359)
T cd03808         358 L  358 (359)
T ss_pred             h
Confidence            6

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.4e-35  Score=280.44  Aligned_cols=327  Identities=22%  Similarity=0.317  Sum_probs=247.5

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCc--ceEEEee-cCCCcc-------cc
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGN--LHVHFAA-NDHGSV-------NL  150 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~--~~v~~~~-~~~~~~-------~~  150 (465)
                      ||+++++.+    ..||.++++..++++|.+.||+|++++...............  ....... .....+       ..
T Consensus         1 kIl~~~~~~----~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (353)
T cd03811           1 KILFVIPSL----GGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRL   76 (353)
T ss_pred             CeEEEeecc----cCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHH
Confidence            689999876    369999999999999999999999999876554333211111  0011111 100111       11


Q ss_pred             CCCCCCcEEEecCC-c--hhHHhhh--cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          151 NNDGAFDYVHTESV-S--LPHWRAK--MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       151 ~~~~~~DiI~~~~~-~--~~~~~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                      .+..+||+||++.. .  +...+..  +.| .+.+.|+..........                 ...      ..+...
T Consensus        77 ~~~~~~dii~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~-----------------~~~------~~~~~~  132 (353)
T cd03811          77 LRKEKPDVVISHLTTTPNVLALLAARLGTK-LIVWEHNSLSLELKRKL-----------------RLL------LLIRKL  132 (353)
T ss_pred             HHhcCCCEEEEcCccchhHHHHHHhhcCCc-eEEEEcCcchhhhccch-----------------hHH------HHHHhh
Confidence            16779999999975 2  1222222  356 99999987643221100                 000      223367


Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHH
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLL  305 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~l  305 (465)
                      ++.+|.++++|+..++.+.+.++.+..++.++|||+|...+.+......    +.+...+ +++++++|++.+.||++.+
T Consensus       133 ~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~-~~~i~~~g~~~~~k~~~~~  207 (353)
T cd03811         133 YRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL----ELGIPPD-GPVILAVGRLSPQKGFDTL  207 (353)
T ss_pred             ccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh----hcCCCCC-ceEEEEEecchhhcChHHH
Confidence            8999999999999999999988776789999999999887755433211    2223333 4888899999999999999


Q ss_pred             HHHHHHhhhcCCCeEEEEEeCCcchhHHHH----hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHH
Q 044542          306 YEAFSSITRDHPGVYLLVAGTGPWGRRYAE----LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAM  379 (465)
Q Consensus       306 l~a~~~l~~~~~~~~l~ivG~g~~~~~~~~----l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAm  379 (465)
                      ++++..+.+++++++|+++|.++..+.+++    ++  ++|.+.|++  +++.++|+.||++++||.. ||+|++++|||
T Consensus       208 i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~-e~~~~~~~Ea~  284 (353)
T cd03811         208 IRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLFVLSSRY-EGFPNVLLEAM  284 (353)
T ss_pred             HHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEEEeCccc-CCCCcHHHHHH
Confidence            999999998888999999999877665543    22  789999997  5789999999999999986 99999999999


Q ss_pred             HcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHH---HHHHHHHHhCChHHHHHHHHHHHHHHHhhCC
Q 044542          380 HCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSF---VEALELVIRDGPKVLQRKGLACKEHALSMFT  445 (465)
Q Consensus       380 a~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~l---a~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  445 (465)
                      ++|+|||+++.++.. +++.++.+|+++++ |++++   ++++..+..+ ++.++++++++++.+.++|+
T Consensus       285 ~~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         285 ALGTPVVATDCPGPR-EILEDGENGLLVPVGDEAALAAAALALLDLLLD-PELRERLAAAARERVAREYS  352 (353)
T ss_pred             HhCCCEEEcCCCChH-HHhcCCCceEEECCCCHHHHHHHHHHHHhccCC-hHHHHHHHHHHHHHHHHHhc
Confidence            999999999999998 89999999999998 89898   7778888887 88888999888888888776

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.9e-34  Score=280.09  Aligned_cols=216  Identities=24%  Similarity=0.334  Sum_probs=190.2

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP  303 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~  303 (465)
                      ..++++|.++++|+..++.+.+.++...+++.+++||++...+.+..            ..++++.++++|++.+.||++
T Consensus       179 ~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~------------~~~~~~~il~~Grl~~~Kg~~  246 (407)
T cd04946         179 YLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKP------------SKDDTLRIVSCSYLVPVKRVD  246 (407)
T ss_pred             HHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCCC------------CCCCCEEEEEeeccccccCHH
Confidence            44689999999999999999998988889999999999976554321            112347888999999999999


Q ss_pred             HHHHHHHHhhhcCC--CeEEEEEeCCcchhHHHHhc------CCeEEcCCCChhHHHHHHHh--cCeEEecccCCCCCcH
Q 044542          304 LLYEAFSSITRDHP--GVYLLVAGTGPWGRRYAELG------QNVKVLGALEAHQLSEFYNA--LDVFVNPTLRPQGLDL  373 (465)
Q Consensus       304 ~ll~a~~~l~~~~~--~~~l~ivG~g~~~~~~~~l~------~~V~~~g~v~~~~~~~~~~~--aDv~v~ps~~~eg~~~  373 (465)
                      .+++|+..+.+++|  +++++++|+|+..+.++++.      ++|.|+|+++++++.++|+.  +|++++||.. ||+|+
T Consensus       247 ~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~-Eg~p~  325 (407)
T cd04946         247 LIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSES-EGLPV  325 (407)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCcc-ccccH
Confidence            99999999988776  56778899998776665442      68999999999999999976  7889999975 99999


Q ss_pred             HHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC--CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          374 TLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP--NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       374 ~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~--d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      +++|||++|+|||+|++||.+ |++.++.+|+++++  |+++++++|.+++++ ++.+++|+++|+++++++|+++...+
T Consensus       326 ~llEAma~G~PVIas~vgg~~-e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~~~~f~~~~~~~  403 (407)
T cd04946         326 SIMEAMSFGIPVIATNVGGTP-EIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKWEENFNASKNYR  403 (407)
T ss_pred             HHHHHHHcCCCEEeCCCCCcH-HHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHhHH
Confidence            999999999999999999998 89999989999985  799999999999998 89999999999999999999999988


Q ss_pred             HHH
Q 044542          452 AYE  454 (465)
Q Consensus       452 ~~~  454 (465)
                      ++.
T Consensus       404 ~~~  406 (407)
T cd04946         404 EFA  406 (407)
T ss_pred             Hhc
Confidence            875

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-34  Score=278.70  Aligned_cols=332  Identities=21%  Similarity=0.237  Sum_probs=227.8

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC---C-----------C
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND---H-----------G  146 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~---~-----------~  146 (465)
                      ||+++++.++   ..||+|+.+.++++.|.+.  +|..+............. ...........   .           .
T Consensus         1 ~i~~~~~~~~---~~GG~E~~~~~l~~~l~~~--~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (351)
T cd03804           1 KVAIVHDWLV---NIGGGEKVVEALARLFPDA--DIFTLVDDPDKLPRLLRL-KKIRTSFIQKLPFARRRYRKYLPLMPL   74 (351)
T ss_pred             CEEEEEeccc---cCCCHHHHHHHHHHhCCCC--CEEEEeecCCccchhhcC-CceeechhhhchhhHhhHhhhCchhhH
Confidence            6999998773   5699999999999998764  333332222111111000 00000000000   0           0


Q ss_pred             ccccCCCCCCcEEEecCCchhHHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHH
Q 044542          147 SVNLNNDGAFDYVHTESVSLPHWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIR  224 (465)
Q Consensus       147 ~~~~~~~~~~DiI~~~~~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (465)
                      .+......++|+|++++.......  ....| .+..+|......+  +.......................+.+.  +..
T Consensus        75 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~-~~~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  149 (351)
T cd03804          75 AIEQFDLSGYDLVISSSHAVAKGVITRPDQL-HICYCHTPMRYAW--DLYHDYLKESGLGKRLALRLLLHYLRIW--DRR  149 (351)
T ss_pred             HHHhccccCCCEEEEcCcHHhccccCCCCCc-EEEEeCCchHHHh--cCchHhhhhcccchhhHHHHHHHHHHHH--HHH
Confidence            011114678999999876443332  23456 7778886422111  1111111111000111111222222222  336


Q ss_pred             hhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHH
Q 044542          225 FFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPL  304 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~  304 (465)
                      .++++|.++++|+.+++.+.+.++   .+..+++||+|.+.+.+...             .+ ..++++|++.+.||++.
T Consensus       150 ~~~~~d~ii~~S~~~~~~~~~~~~---~~~~vi~~~~d~~~~~~~~~-------------~~-~~il~~G~~~~~K~~~~  212 (351)
T cd03804         150 SAARVDYFIANSRFVARRIKKYYG---RDATVIYPPVDTDRFTPAEE-------------KE-DYYLSVGRLVPYKRIDL  212 (351)
T ss_pred             HhcCCCEEEECCHHHHHHHHHHhC---CCcEEECCCCCHhhcCcCCC-------------CC-CEEEEEEcCccccChHH
Confidence            689999999999999999988765   35689999999887754321             12 24669999999999999


Q ss_pred             HHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh-cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC
Q 044542          305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL-GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR  383 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l-~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~  383 (465)
                      +++|++.+    + ++|+|+|+|+..+.+++. .++|+|+|+++++++.++|+.||++++||.  |++|++++|||+||+
T Consensus       213 li~a~~~~----~-~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~--e~~g~~~~Eama~G~  285 (351)
T cd03804         213 AIEAFNKL----G-KRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAE--EDFGIVPVEAMASGT  285 (351)
T ss_pred             HHHHHHHC----C-CcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCc--CCCCchHHHHHHcCC
Confidence            99999987    3 789999999887777653 389999999999999999999999999994  999999999999999


Q ss_pred             eEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542          384 TVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY  453 (465)
Q Consensus       384 PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  453 (465)
                      |||+++.|+.. +++.++.+|+++++ |+++++++|.+++++ ++   .+.++.++.+++ |+|+++.+++
T Consensus       286 Pvi~~~~~~~~-e~i~~~~~G~~~~~~~~~~la~~i~~l~~~-~~---~~~~~~~~~~~~-~~~~~~~~~~  350 (351)
T cd03804         286 PVIAYGKGGAL-ETVIDGVTGILFEEQTVESLAAAVERFEKN-ED---FDPQAIRAHAER-FSESRFREKI  350 (351)
T ss_pred             CEEEeCCCCCc-ceeeCCCCEEEeCCCCHHHHHHHHHHHHhC-cc---cCHHHHHHHHHh-cCHHHHHHHh
Confidence            99999999998 89999999999998 999999999999998 53   233445555554 8999988765

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>PHA01630 putative group 1 glycosyl transferase

Probab=100.00  E-value=2.8e-33  Score=263.08  Aligned_cols=290  Identities=14%  Similarity=0.196  Sum_probs=213.2

Q ss_pred             HHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEEEecC--CchhHHhh---hc
Q 044542           99 ERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTES--VSLPHWRA---KM  173 (465)
Q Consensus        99 ~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI~~~~--~~~~~~~~---~~  173 (465)
                      .++-.-+.+.|...|++|+++-...-....                      ... +++..+.|+  ..+..|..   .+
T Consensus        13 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~   69 (331)
T PHA01630         13 VRQKKLLEEHLKMLGHKVTVFEKPTLTKYQ----------------------LPP-GYPIYIYYTIFNSMLFWKGIPHVG   69 (331)
T ss_pred             HHHHHHHHHHHHHhCCeeEEEeccchhhhh----------------------cCC-CCceeeehhhhhHHHHHhhccccC
Confidence            455666788999999999998665422111                      001 234344454  23333322   23


Q ss_pred             CCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh-hcccCEEEEeChhHHHHHHHHhCCC-C
Q 044542          174 VPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF-FSSYNQHICISNSAAEVLVKIYQLP-Q  251 (465)
Q Consensus       174 ~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~ii~~S~~~~~~~~~~~~~~-~  251 (465)
                      .| ++.++|+..                         .+...+..     .+ .+++|.++++|+.+++.+.+ .+++ +
T Consensus        70 ~~-~v~e~~~~~-------------------------~l~~~~~~-----~~~~~~ad~ii~~S~~~~~~l~~-~g~~~~  117 (331)
T PHA01630         70 KN-IVFEVADTD-------------------------AISHTALY-----FFRNQPVDEIVVPSQWSKNAFYT-SGLKIP  117 (331)
T ss_pred             Cc-eEEEEEeec-------------------------hhhHHHHH-----HHhhccCCEEEECCHHHHHHHHH-cCCCCC
Confidence            35 888888721                         11111111     33 47899999999999999987 4554 5


Q ss_pred             CCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchh
Q 044542          252 RNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGR  331 (465)
Q Consensus       252 ~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~  331 (465)
                      +++.+||||+|.+.|.+....           .+.+++++++|++.++||++.+++|++.+.+++++++++++|++....
T Consensus       118 ~~i~vIpNGVd~~~f~~~~~~-----------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~  186 (331)
T PHA01630        118 QPIYVIPHNLNPRMFEYKPKE-----------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDP  186 (331)
T ss_pred             CCEEEECCCCCHHHcCCCccc-----------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccch
Confidence            789999999998877654221           123477778889999999999999999999888899999999765443


Q ss_pred             HHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEe----
Q 044542          332 RYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTF----  407 (465)
Q Consensus       332 ~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~----  407 (465)
                      .+..+.   .+.|.++.+++..+|+.||++++||.+ |+||++++||||||+|||+|+.||.. |++.++.+|+++    
T Consensus       187 ~l~~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~~-E~fgl~~lEAMA~G~PVIas~~gg~~-E~i~~~~ng~lv~~~~  261 (331)
T PHA01630        187 RLFGLN---GVKTPLPDDDIYSLFAGCDILFYPVRG-GAFEIPVIEALALGLDVVVTEKGAWS-EWVLSNLDVYWIKSGR  261 (331)
T ss_pred             hhcccc---ceeccCCHHHHHHHHHhCCEEEECCcc-ccCChHHHHHHHcCCCEEEeCCCCch-hhccCCCceEEeeecc
Confidence            332221   135668899999999999999999986 99999999999999999999999988 888888776665    


Q ss_pred             ----------------CCCHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          408 ----------------SPNVKSFVEALELVIRDG-PKVLQRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       408 ----------------~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                                      ++|.+++++++.+++.++ ++.++++..++.+.+.++|||++++++++++|++
T Consensus       262 ~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~  330 (331)
T PHA01630        262 KPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK  330 (331)
T ss_pred             cccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence                            457889999999999873 2445555555556567779999999999999975

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=4.6e-33  Score=274.90  Aligned_cols=215  Identities=14%  Similarity=0.226  Sum_probs=182.1

Q ss_pred             hhcccCEEEEeChhHHHHHHHHhC---CCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          225 FFSSYNQHICISNSAAEVLVKIYQ---LPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~~~~~~~~---~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      ..+.+|.+|++|+..++.+.+.++   .+..++.++|||++...+.+..             ...+.+++++||+.+.||
T Consensus       267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~-------------~r~~~~il~vGrl~~~Kg  333 (500)
T TIGR02918       267 NADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ-------------ERKPFSIITASRLAKEKH  333 (500)
T ss_pred             chhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-------------ccCCeEEEEEeccccccC
Confidence            357789999999999998887653   3467899999998754432211             122367889999999999


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL  375 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~  375 (465)
                      ++.+++|+..+.++.|+++|.|+|+|+..+.++++      .++|.|+|+.   ++.++|+.||++|+||.. ||||+++
T Consensus       334 ~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~-Egfgl~~  409 (500)
T TIGR02918       334 IDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTS-EGFGLTL  409 (500)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCcc-ccccHHH
Confidence            99999999999988899999999999877666553      2789999975   688999999999999975 9999999


Q ss_pred             HHHHHcCCeEEecCCC-CcceeeeeeCCceEEeCC-----C----HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCC
Q 044542          376 IEAMHCGRTVLTPNYP-SIVRTVVVNEELGYTFSP-----N----VKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT  445 (465)
Q Consensus       376 ~EAma~G~PvI~s~~g-g~~~e~v~~~~~G~l~~~-----d----~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  445 (465)
                      +||||||+|||+++++ |.+ +++.++.+|+++++     |    +++|+++|.++++  ++.+++|++++++.+++ ||
T Consensus       410 lEAma~G~PVI~~dv~~G~~-eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~-fs  485 (500)
T TIGR02918       410 MEAVGSGLGMIGFDVNYGNP-TFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDIDAFHEYSYQIAEG-FL  485 (500)
T ss_pred             HHHHHhCCCEEEecCCCCCH-HHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHh-cC
Confidence            9999999999999987 676 89999999999983     2    8899999999994  45789999999998765 99


Q ss_pred             HHHHHHHHHHHHHHh
Q 044542          446 ATKMASAYERFFLRM  460 (465)
Q Consensus       446 ~~~~~~~~~~~~~~~  460 (465)
                      |+.++++|.++++++
T Consensus       486 ~~~v~~~w~~ll~~~  500 (500)
T TIGR02918       486 TANIIEKWKKLVREV  500 (500)
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999999999764

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>PHA01633 putative glycosyl transferase group 1

Probab=100.00  E-value=2.5e-32  Score=253.08  Aligned_cols=306  Identities=15%  Similarity=0.227  Sum_probs=220.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYV  159 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI  159 (465)
                      ||-++++..|      +.+..+...++..|++.|--|++++....-...      ...+.+.+..+..            
T Consensus         1 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~------------   56 (335)
T PHA01633          1 MKTAILTMNY------SSISNVSEDIAEVLRENGEIVTITKNPFYIPKA------EKLIVFIPFHPPS------------   56 (335)
T ss_pred             CceEEEEech------hhhhhHHHHHHHHHHhCCcEEEEecCCcccCcc------ceEEEEeecCCcc------------
Confidence            6778888765      567778899999999999888887765432211      1112222211110            


Q ss_pred             EecCCc-hhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChh
Q 044542          160 HTESVS-LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNS  238 (465)
Q Consensus       160 ~~~~~~-~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~  238 (465)
                       .+.+- ...++....+ ++.++|+.+..    +                  ...          +.+.+.+.+|++|+.
T Consensus        57 -~~~~~~~~~~~~~~~~-~~tt~~g~~~~----~------------------~y~----------~~m~~~~~vIavS~~  102 (335)
T PHA01633         57 -LNPYLYAYYQFKGKKY-FYTTCDGIPNI----E------------------IVN----------KYLLQDVKFIPNSKF  102 (335)
T ss_pred             -cchHHhhhhhhcCCCc-eEEeeCCcCch----H------------------HHH----------HHHhcCCEEEeCCHH
Confidence             01111 1222333445 89999987521    0                  000          333455789999999


Q ss_pred             HHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCC
Q 044542          239 AAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG  318 (465)
Q Consensus       239 ~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~  318 (465)
                      .++.+++ .|++.. + +|+||+|.+.|.+........+++++....+.++++++||+.++||++.+++|++++.+++|+
T Consensus       103 t~~~L~~-~G~~~~-i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~  179 (335)
T PHA01633        103 SAENLQE-VGLQVD-L-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPD  179 (335)
T ss_pred             HHHHHHH-hCCCCc-e-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCC
Confidence            9999997 577644 3 578999999887754333456666665433447888999999999999999999999887664


Q ss_pred             ----eEEEEEeCCcchhHHHHh--cCCeEEc---CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542          319 ----VYLLVAGTGPWGRRYAEL--GQNVKVL---GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN  389 (465)
Q Consensus       319 ----~~l~ivG~g~~~~~~~~l--~~~V~~~---g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~  389 (465)
                          ++++++|.+    .++++  .++|+|+   |+++.+++.++|++||++|+||.+ ||||++++|||+||+|||+++
T Consensus       180 ~~~~i~l~ivG~~----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~-EgfGlvlLEAMA~G~PVVas~  254 (335)
T PHA01633        180 IAKKIHFFVISHK----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGT-EGFGMPVLESMAMGTPVIHQL  254 (335)
T ss_pred             ccccEEEEEEcHH----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCcc-ccCCHHHHHHHHcCCCEEEcc
Confidence                578888742    33443  3789998   566789999999999999999985 999999999999999999999


Q ss_pred             CCCcceeeee------------------eCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542          390 YPSIVRTVVV------------------NEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA  450 (465)
Q Consensus       390 ~gg~~~e~v~------------------~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  450 (465)
                      .++++ |++.                  +...|+.++. |+++++++|.++++...  .+..+.++++.+++ |+|++++
T Consensus       255 ~~~l~-Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~-f~~~~~~  330 (335)
T PHA01633        255 MPPLD-EFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKK-YDIRNLY  330 (335)
T ss_pred             CCCce-eecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHh-cCHHHHH
Confidence            99987 6532                  1235778888 99999999999976522  33446778887766 9999999


Q ss_pred             HHHHH
Q 044542          451 SAYER  455 (465)
Q Consensus       451 ~~~~~  455 (465)
                      ++|++
T Consensus       331 ~~~~~  335 (335)
T PHA01633        331 TRFLE  335 (335)
T ss_pred             HHhhC
Confidence            99863

>PLN02275 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.7e-32  Score=264.80  Aligned_cols=298  Identities=16%  Similarity=0.212  Sum_probs=209.7

Q ss_pred             ChHHHHHHHHHHHHHhCCc-EEEEEeCCCCCCCCCcccCCcceEEEeecCC------Cccc-------------------
Q 044542           96 GGMERHASTLYHALAARGH-EIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------GSVN-------------------  149 (465)
Q Consensus        96 gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~-------------------  149 (465)
                      +|.+..+..++..|.++|+ +|++++..............+..++..+...      ..+.                   
T Consensus        15 ~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (371)
T PLN02275         15 FGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQPRLLQRLPRVLYALALLLKVAIQFLMLLWFL   94 (371)
T ss_pred             CCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCCcccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            5567778888899998875 8999998665433333333344455443211      1111                   


Q ss_pred             cCCCCCCcEEEecCCch-----hHHh-h--hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHH
Q 044542          150 LNNDGAFDYVHTESVSL-----PHWR-A--KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVD  221 (465)
Q Consensus       150 ~~~~~~~DiI~~~~~~~-----~~~~-~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (465)
                      ..+..+||+||++++..     ..++ +  .+.| +++++|+.+........          ........+..++     
T Consensus        95 ~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~----------~~~~~~~~~~~~~-----  158 (371)
T PLN02275         95 CVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAK-FVIDWHNFGYTLLALSL----------GRSHPLVRLYRWY-----  158 (371)
T ss_pred             HhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCC-EEEEcCCccHHHHhccc----------CCCCHHHHHHHHH-----
Confidence            02457999999987431     1111 2  2456 99999987422111000          0000111222222     


Q ss_pred             HHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          222 EIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       222 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      ++..++++|.++++|+.+++.+.+.+|++   +.+||||. .+.|.+.... ..      ...+.+.+++++||+.++||
T Consensus       159 e~~~~~~ad~ii~~S~~~~~~l~~~~g~~---i~vi~n~~-~~~f~~~~~~-~~------~~~~~~~~i~~~grl~~~k~  227 (371)
T PLN02275        159 ERHYGKMADGHLCVTKAMQHELDQNWGIR---ATVLYDQP-PEFFRPASLE-IR------LRPNRPALVVSSTSWTPDED  227 (371)
T ss_pred             HHHHHhhCCEEEECCHHHHHHHHHhcCCC---eEEECCCC-HHHcCcCCch-hc------ccCCCcEEEEEeCceeccCC
Confidence            33668899999999999999998866764   89999985 4555543221 11      11233356778999999999


Q ss_pred             HHHHHHHHHHhh-----------------hcCCCeEEEEEeCCcchhHHHHh----c-CCeEEcC-CCChhHHHHHHHhc
Q 044542          302 HPLLYEAFSSIT-----------------RDHPGVYLLVAGTGPWGRRYAEL----G-QNVKVLG-ALEAHQLSEFYNAL  358 (465)
Q Consensus       302 ~~~ll~a~~~l~-----------------~~~~~~~l~ivG~g~~~~~~~~l----~-~~V~~~g-~v~~~~~~~~~~~a  358 (465)
                      ++.+++|+..+.                 +++|+++|+|+|+|+.++.++++    + ++|.|.+ +++.+++..+|+.|
T Consensus       228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~a  307 (371)
T PLN02275        228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSA  307 (371)
T ss_pred             HHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhC
Confidence            999999998874                 23578999999999987766553    3 5688765 68999999999999


Q ss_pred             CeEEecc--cCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHH
Q 044542          359 DVFVNPT--LRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI  422 (465)
Q Consensus       359 Dv~v~ps--~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll  422 (465)
                      |+++.|+  ..+|++|++++||||||+|||+++.|+.+ |++.++.+|++++ |+++|+++|.+++
T Consensus       308 Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~-eiv~~g~~G~lv~-~~~~la~~i~~l~  371 (371)
T PLN02275        308 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG-ELVKDGKNGLLFS-SSSELADQLLELL  371 (371)
T ss_pred             CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH-HHccCCCCeEEEC-CHHHHHHHHHHhC
Confidence            9999863  33589999999999999999999999998 8999999999998 8999999998763

>PLN02501 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=4.3e-31  Score=257.10  Aligned_cols=336  Identities=15%  Similarity=0.153  Sum_probs=225.3

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCcc--------------------------c
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHNDV--------------------------H  132 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~--------------------------~  132 (465)
                      -+|+|+++.-.  |...|....-.--|-+|++. |++|+++.+=-...+...+                          .
T Consensus       323 r~~~ivTtAsl--PWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~  400 (794)
T PLN02501        323 RHVAIVTTASL--PWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGF  400 (794)
T ss_pred             CeEEEEEcccC--cccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCC
Confidence            47999987432  35566655555556677777 7999998763221111000                          1


Q ss_pred             CCcceEEEeecCCCccccC-----------CCCCCcEEEecCCchhHHh-------hhcCCcEEEEecchhHHHHhhhhh
Q 044542          133 QGNLHVHFAANDHGSVNLN-----------NDGAFDYVHTESVSLPHWR-------AKMVPNVAVTWHGIWYEVMHSKLF  194 (465)
Q Consensus       133 ~~~~~v~~~~~~~~~~~~~-----------~~~~~DiI~~~~~~~~~~~-------~~~~p~~v~~~h~~~~~~~~~~~~  194 (465)
                      .....+.+.+.+.......           ...+|||||++++....|.       .+..| ++.++|.....+......
T Consensus       401 ~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~P-VVasyHTny~eYl~~y~~  479 (794)
T PLN02501        401 KADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNH-VVGVVHTNYLEYIKREKN  479 (794)
T ss_pred             CCCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcCC-eEEEEeCCcHHHHhHhcc
Confidence            1223344443332111111           6789999999987544443       22236 999999765432221100


Q ss_pred             hhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCc
Q 044542          195 GELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGV  274 (465)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~  274 (465)
                                 ..+...+.+.+.+++.  +++  ||.++++|+.+.+ +      +...+.. .||||.+.|.+....  
T Consensus       480 -----------g~L~~~llk~l~~~v~--r~h--cD~VIaPS~atq~-L------~~~vI~n-VnGVDte~F~P~~r~--  534 (794)
T PLN02501        480 -----------GALQAFFVKHINNWVT--RAY--CHKVLRLSAATQD-L------PKSVICN-VHGVNPKFLKIGEKV--  534 (794)
T ss_pred             -----------hhHHHHHHHHHHHHHH--Hhh--CCEEEcCCHHHHH-h------cccceee-cccccccccCCcchh--
Confidence                       0011122222222221  112  8999999977663 2      1222222 279999999876442  


Q ss_pred             ccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc----CCeEEcCCCChhH
Q 044542          275 RFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG----QNVKVLGALEAHQ  350 (465)
Q Consensus       275 ~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~----~~V~~~g~v~~~~  350 (465)
                      ..++++|++... ..++|+||+.+.||++.+++|++.+.++.++++|+|+|+|+.++.++++.    -+|.|+|..  ++
T Consensus       535 ~~~r~lgi~~~~-kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~--dd  611 (794)
T PLN02501        535 AEERELGQQAFS-KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGR--DH  611 (794)
T ss_pred             HHHHhcCCcccc-CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCC--CC
Confidence            222456665433 23569999999999999999999998877899999999999987776643    458899987  56


Q ss_pred             HHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHH
Q 044542          351 LSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQ  430 (465)
Q Consensus       351 ~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~  430 (465)
                      ...+|+.+|++|+||.. |+||++++||||||+|||+++.+|.  +++.++.+|++.. |+++++++|.+++.+ +..+.
T Consensus       612 ~~~lyasaDVFVlPS~s-EgFGlVlLEAMA~GlPVVATd~pG~--e~V~~g~nGll~~-D~EafAeAI~~LLsd-~~~rl  686 (794)
T PLN02501        612 ADDSLHGYKVFINPSIS-DVLCTATAEALAMGKFVVCADHPSN--EFFRSFPNCLTYK-TSEDFVAKVKEALAN-EPQPL  686 (794)
T ss_pred             HHHHHHhCCEEEECCCc-ccchHHHHHHHHcCCCEEEecCCCC--ceEeecCCeEecC-CHHHHHHHHHHHHhC-chhhh
Confidence            67899999999999986 9999999999999999999999985  4477788888764 999999999999998 44332


Q ss_pred             HHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          431 RKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       431 ~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      .+.+      ...+||++.++++++.=
T Consensus       687 ~~~a------~~~~SWeAaadrLle~~  707 (794)
T PLN02501        687 TPEQ------RYNLSWEAATQRFMEYS  707 (794)
T ss_pred             HHHH------HhhCCHHHHHHHHHHhh
Confidence            2221      22589999999998753

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.97  E-value=1.7e-30  Score=252.25  Aligned_cols=263  Identities=19%  Similarity=0.218  Sum_probs=203.7

Q ss_pred             CCCcEEEecCCchhHH--hh--hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhccc
Q 044542          154 GAFDYVHTESVSLPHW--RA--KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSY  229 (465)
Q Consensus       154 ~~~DiI~~~~~~~~~~--~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (465)
                      .++|+++++......+  +.  ...+ .+..+|+.......           .+...    .+........   ..++++
T Consensus        98 ~~~diii~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~-----------~~~~~----~~~~~~~~~~---~~~~~~  158 (372)
T cd04949          98 TKPDVFILDRPTLDGQALLNMKKAAK-VVVVLHSNHVSDNN-----------DPVHS----LINNFYEYVF---ENLDKV  158 (372)
T ss_pred             CCCCEEEECCccccchhHHhccCCce-EEEEEChHHhCCcc-----------ccccc----ccchhhHHHH---hChhhC
Confidence            7899999987643332  22  1223 78899974321100           00000    1111111111   335789


Q ss_pred             CEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHH
Q 044542          230 NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAF  309 (465)
Q Consensus       230 d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~  309 (465)
                      |.++++|+..++.+.+.++.. .++.++|||++...+.+...           ....+..++++||+.+.||++.+++|+
T Consensus       159 d~ii~~s~~~~~~l~~~~~~~-~~v~~ip~g~~~~~~~~~~~-----------~~~~~~~i~~vgrl~~~K~~~~li~a~  226 (372)
T cd04949         159 DGVIVATEQQKQDLQKQFGNY-NPIYTIPVGSIDPLKLPAQF-----------KQRKPHKIITVARLAPEKQLDQLIKAF  226 (372)
T ss_pred             CEEEEccHHHHHHHHHHhCCC-CceEEEcccccChhhcccch-----------hhcCCCeEEEEEccCcccCHHHHHHHH
Confidence            999999999999999877643 45999999999876654310           012235677999999999999999999


Q ss_pred             HHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC
Q 044542          310 SSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR  383 (465)
Q Consensus       310 ~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~  383 (465)
                      ..+.+++|+++|+|+|.|+....++++      .++|.+.|+.  +++.++|+.||++|+||.. ||+|++++|||++|+
T Consensus       227 ~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~-Eg~~~~~lEAma~G~  303 (372)
T cd04949         227 AKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQS-EGFGLSLMEALSHGL  303 (372)
T ss_pred             HHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEecccc-cccChHHHHHHhCCC
Confidence            999999999999999998776554432      2789999965  7899999999999999975 999999999999999


Q ss_pred             eEEecCCC-CcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542          384 TVLTPNYP-SIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY  453 (465)
Q Consensus       384 PvI~s~~g-g~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  453 (465)
                      |||+++.+ |.. +++.++.+|+++++ |+++++++|.+++++ ++.++++++++++.+ ++|||++++++|
T Consensus       304 PvI~~~~~~g~~-~~v~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~-~~~s~~~~~~~w  372 (372)
T cd04949         304 PVISYDVNYGPS-EIIEDGENGYLVPKGDIEALAEAIIELLND-PKLLQKFSEAAYENA-ERYSEENVWEKW  372 (372)
T ss_pred             CEEEecCCCCcH-HHcccCCCceEeCCCcHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence            99999987 565 89999999999999 999999999999999 899999999999995 559999998875

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.97  E-value=5.4e-28  Score=232.73  Aligned_cols=373  Identities=19%  Similarity=0.232  Sum_probs=253.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC--cc------------------------cC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN--DV------------------------HQ  133 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~------------------------~~  133 (465)
                      |||++++.+.-+-...||...++..+.++|++.|++|.|+.+........  +.                        ..
T Consensus         1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (487)
T COG0297           1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD   80 (487)
T ss_pred             CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence            79999998763336899999999999999999999999999876522211  00                        00


Q ss_pred             CcceEEEeecCC--C-----ccccC------------------C-C--CCCcEEEecCCc---hhHHhhh------cCCc
Q 044542          134 GNLHVHFAANDH--G-----SVNLN------------------N-D--GAFDYVHTESVS---LPHWRAK------MVPN  176 (465)
Q Consensus       134 ~~~~v~~~~~~~--~-----~~~~~------------------~-~--~~~DiI~~~~~~---~~~~~~~------~~p~  176 (465)
                      .+....+.....  .     .+.+.                  . .  ..|||||+|++.   .+.+++.      .+| 
T Consensus        81 ~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~-  159 (487)
T COG0297          81 GGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIP-  159 (487)
T ss_pred             CCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCC-
Confidence            001111111000  0     00111                  1 1  479999999873   2333333      346 


Q ss_pred             EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHH-HHhC-------
Q 044542          177 VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLV-KIYQ-------  248 (465)
Q Consensus       177 ~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~-~~~~-------  248 (465)
                      .|+|+|+..+.-...........-+. .... ...+. .....--.+.-+..+|.+.++|...++.+. ..+|       
T Consensus       160 tVfTIHNl~~qG~~~~~~~~~lgLp~-~~~~-~~~l~-~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l  236 (487)
T COG0297         160 TVFTIHNLAYQGLFRLQYLEELGLPF-EAYA-SFGLE-FYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLL  236 (487)
T ss_pred             eEEEEeeceeecccchhhHHHhcCCH-HHhh-hceee-ecCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhh
Confidence            99999986544322211111110000 0000 00000 001111122456789999999999888776 2121       


Q ss_pred             -CCCCCEEEecCCCCCCCccCCccc-----------------CcccccccCCCCC-CcEEEEEeeccccccCHHHHHHHH
Q 044542          249 -LPQRNVHVILNGVDETKFVHDPEA-----------------GVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLLYEAF  309 (465)
Q Consensus       249 -~~~~ki~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~ll~a~  309 (465)
                       .-..++.-|.||+|.+.+.|....                 +..+++++|++.+ +...++++||+..+||++.+++++
T Consensus       237 ~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i  316 (487)
T COG0297         237 SWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAI  316 (487)
T ss_pred             hhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHH
Confidence             123688999999999988775432                 2346677898854 337888999999999999999999


Q ss_pred             HHhhhcCCCeEEEEEeCCc--chhHHHHhc----CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC
Q 044542          310 SSITRDHPGVYLLVAGTGP--WGRRYAELG----QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR  383 (465)
Q Consensus       310 ~~l~~~~~~~~l~ivG~g~--~~~~~~~l~----~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~  383 (465)
                      ..+.++.  +++++.|.|+  +++.+..+.    .++.+.-..+..-....|+.+|++++||.+ |+||++-++||..|+
T Consensus       317 ~~~l~~~--~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSrf-EPcGL~ql~amryGt  393 (487)
T COG0297         317 DELLEQG--WQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRF-EPCGLTQLYAMRYGT  393 (487)
T ss_pred             HHHHHhC--ceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCcC-cCCcHHHHHHHHcCC
Confidence            9998864  8999999983  233444433    556666666667788899999999999976 999999999999999


Q ss_pred             eEEecCCCCcceeeeee--------CCceEEeCC-CHHHHHHHHHHHHh---CChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          384 TVLTPNYPSIVRTVVVN--------EELGYTFSP-NVKSFVEALELVIR---DGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       384 PvI~s~~gg~~~e~v~~--------~~~G~l~~~-d~~~la~~i~~ll~---~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      ++|+..+||.+ +.|.+        ..+|+++.+ ++++++.+|.+.+.   +++..++.+..++..   .+|+|+..++
T Consensus       394 vpIv~~tGGLa-dTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~  469 (487)
T COG0297         394 LPIVRETGGLA-DTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAK  469 (487)
T ss_pred             cceEcccCCcc-ceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHH
Confidence            99999999999 55553        579999999 99999999998765   322225555544433   6799999999


Q ss_pred             HHHHHHHHhcCC
Q 044542          452 AYERFFLRMKNP  463 (465)
Q Consensus       452 ~~~~~~~~~~~~  463 (465)
                      +|.++|+.+.+.
T Consensus       470 ~y~~lY~~~~~~  481 (487)
T COG0297         470 EYVELYKPLLSK  481 (487)
T ss_pred             HHHHHHHHHhcc
Confidence            999999998764

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.96  E-value=5.3e-28  Score=233.15  Aligned_cols=316  Identities=17%  Similarity=0.130  Sum_probs=222.0

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC----Cc--------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH----GS--------  147 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~--------  147 (465)
                      |||++++..      .||.++++.+++++|.+.||+|++++...... .......+..++......    ..        
T Consensus         2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~   74 (357)
T PRK00726          2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGME-ARLVPKAGIEFHFIPSGGLRRKGSLANLKAPF   74 (357)
T ss_pred             cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchh-hhccccCCCcEEEEeccCcCCCChHHHHHHHH
Confidence            899998763      48999999999999999999999999865321 111122233333332211    10        


Q ss_pred             ---------cccCCCCCCcEEEecCC--chhHHh---hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhh
Q 044542          148 ---------VNLNNDGAFDYVHTESV--SLPHWR---AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ  213 (465)
Q Consensus       148 ---------~~~~~~~~~DiI~~~~~--~~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (465)
                               ....++.+||+||+|+.  .+...+   ..++| ++.+.|+...                           
T Consensus        75 ~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~---------------------------  126 (357)
T PRK00726         75 KLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIP-LVIHEQNAVP---------------------------  126 (357)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCC-EEEEcCCCCc---------------------------
Confidence                     00116779999999974  222222   23456 7665554210                           


Q ss_pred             hhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEe
Q 044542          214 EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVA  293 (465)
Q Consensus       214 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~  293 (465)
                      ....     +..++.+|.+++.++...   .+   .+..++++++||+|.+.+.+..     .+++++++++. .+++++
T Consensus       127 ~~~~-----r~~~~~~d~ii~~~~~~~---~~---~~~~~i~vi~n~v~~~~~~~~~-----~~~~~~~~~~~-~~i~~~  189 (357)
T PRK00726        127 GLAN-----KLLARFAKKVATAFPGAF---PE---FFKPKAVVTGNPVREEILALAA-----PPARLAGREGK-PTLLVV  189 (357)
T ss_pred             cHHH-----HHHHHHhchheECchhhh---hc---cCCCCEEEECCCCChHhhcccc-----hhhhccCCCCC-eEEEEE
Confidence            0111     134567899998887442   11   5679999999999987654321     22345555554 566688


Q ss_pred             eccccccCHHHHH-HHHHHhhhcCCCeEEEEEeCCcchhHHHH--hcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCC
Q 044542          294 GRLVRDKGHPLLY-EAFSSITRDHPGVYLLVAGTGPWGRRYAE--LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG  370 (465)
Q Consensus       294 Grl~~~Kg~~~ll-~a~~~l~~~~~~~~l~ivG~g~~~~~~~~--l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg  370 (465)
                      |+....|++..++ +|++++.+. + ..++++|+|+.++..+.  ++-+|.+.|++  +++.++|+.||+++.++    |
T Consensus       190 gg~~~~~~~~~~l~~a~~~~~~~-~-~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~~~----g  261 (357)
T PRK00726        190 GGSQGARVLNEAVPEALALLPEA-L-QVIHQTGKGDLEEVRAAYAAGINAEVVPFI--DDMAAAYAAADLVICRA----G  261 (357)
T ss_pred             CCcHhHHHHHHHHHHHHHHhhhC-c-EEEEEcCCCcHHHHHHHhhcCCcEEEeehH--hhHHHHHHhCCEEEECC----C
Confidence            8888888765555 999888654 3 56788999876544333  23349999998  79999999999999854    2


Q ss_pred             CcHHHHHHHHcCCeEEecCCCCcce-------eeeeeCCceEEeCC-C--HHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542          371 LDLTLIEAMHCGRTVLTPNYPSIVR-------TVVVNEELGYTFSP-N--VKSFVEALELVIRDGPKVLQRKGLACKEHA  440 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s~~gg~~~-------e~v~~~~~G~l~~~-d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~  440 (465)
                       +++++|||++|+|+|++..++..+       +.+.+.+.|+++++ |  +++++++|.+++++ ++.+++|++++++++
T Consensus       262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~  339 (357)
T PRK00726        262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMAEAARALG  339 (357)
T ss_pred             -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcC
Confidence             689999999999999987653221       45667789999987 6  99999999999999 899999999999987


Q ss_pred             HhhCCHHHHHHHHHHHHH
Q 044542          441 LSMFTATKMASAYERFFL  458 (465)
Q Consensus       441 ~~~fs~~~~~~~~~~~~~  458 (465)
                      ++ ++.+.+++.+.++.+
T Consensus       340 ~~-~~~~~~~~~~~~~~~  356 (357)
T PRK00726        340 KP-DAAERLADLIEELAR  356 (357)
T ss_pred             Cc-CHHHHHHHHHHHHhh
Confidence            55 899999999988764

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.96  E-value=8.2e-27  Score=229.88  Aligned_cols=340  Identities=15%  Similarity=0.150  Sum_probs=217.6

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEE--EeCCCCCCCCC-cccCCcceEEEeecCCC-c-cccCCCCC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHV--FTAPSDRKPHN-DVHQGNLHVHFAANDHG-S-VNLNNDGA  155 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v--~~~~~~~~~~~-~~~~~~~~v~~~~~~~~-~-~~~~~~~~  155 (465)
                      +.++++.      ...|-...+..|++.|.+.++++.+  .+....+.... ........+.+.+.... . .++.+..+
T Consensus        51 ~~iW~Ha------~s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~d~~~~~~~~l~~~~  124 (425)
T PRK05749         51 PLIWFHA------VSVGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPYDLPGAVRRFLRFWR  124 (425)
T ss_pred             CeEEEEe------CCHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecCCcHHHHHHHHHhhC
Confidence            4556654      2356778899999999988755433  33222221111 11111222333332211 1 12237889


Q ss_pred             CcEEEecCCc-hhHH----hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccC
Q 044542          156 FDYVHTESVS-LPHW----RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYN  230 (465)
Q Consensus       156 ~DiI~~~~~~-~~~~----~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (465)
                      ||++|++... .+..    ...++| ++...|.+.....                     ..+.++...  .+..++.+|
T Consensus       125 Pd~v~~~~~~~~~~~l~~~~~~~ip-~vl~~~~~~~~s~---------------------~~~~~~~~~--~r~~~~~~d  180 (425)
T PRK05749        125 PKLVIIMETELWPNLIAELKRRGIP-LVLANARLSERSF---------------------KRYQKFKRF--YRLLFKNID  180 (425)
T ss_pred             CCEEEEEecchhHHHHHHHHHCCCC-EEEEeccCChhhH---------------------HHHHHHHHH--HHHHHHhCC
Confidence            9999987432 1111    223567 6665443321110                     000111111  125678899


Q ss_pred             EEEEeChhHHHHHHHHhCCCCCCEEEecCC-CCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHH
Q 044542          231 QHICISNSAAEVLVKIYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAF  309 (465)
Q Consensus       231 ~ii~~S~~~~~~~~~~~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~  309 (465)
                      .++++|+..++.+.+ +|++++ +.+++|+ .|.............++++++ + ++ .+++++|+  ..|+.+.+++|+
T Consensus       181 ~ii~~S~~~~~~l~~-~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~-~-~~-~vil~~~~--~~~~~~~ll~A~  253 (425)
T PRK05749        181 LVLAQSEEDAERFLA-LGAKNE-VTVTGNLKFDIEVPPELAARAATLRRQLA-P-NR-PVWIAAST--HEGEEELVLDAH  253 (425)
T ss_pred             EEEECCHHHHHHHHH-cCCCCC-cEecccccccCCCChhhHHHHHHHHHHhc-C-CC-cEEEEeCC--CchHHHHHHHHH
Confidence            999999999999988 688777 8899885 332211111112234566665 3 33 45557775  367899999999


Q ss_pred             HHhhhcCCCeEEEEEeCCcch-hHHHHh----c-CCeEEcCCC------------ChhHHHHHHHhcCeEEe-cccCCCC
Q 044542          310 SSITRDHPGVYLLVAGTGPWG-RRYAEL----G-QNVKVLGAL------------EAHQLSEFYNALDVFVN-PTLRPQG  370 (465)
Q Consensus       310 ~~l~~~~~~~~l~ivG~g~~~-~~~~~l----~-~~V~~~g~v------------~~~~~~~~~~~aDv~v~-ps~~~eg  370 (465)
                      +++.+++|+++|+|+|+|+.+ +.++++    + ..+.+.|..            +.+++..+|+.||++++ +|.. |+
T Consensus       254 ~~l~~~~~~~~liivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~-e~  332 (425)
T PRK05749        254 RALLKQFPNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLV-KR  332 (425)
T ss_pred             HHHHHhCCCcEEEEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcC-CC
Confidence            999887899999999998865 444443    2 233333311            13689999999999666 5654 88


Q ss_pred             CcHHHHHHHHcCCeEEecCC-CCcceeeeee-CCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHH
Q 044542          371 LDLTLIEAMHCGRTVLTPNY-PSIVRTVVVN-EELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTAT  447 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s~~-gg~~~e~v~~-~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~  447 (465)
                      +|.+++|||+||+|||+++. ++.. ++... .++|.++++ |+++|+++|.+++++ ++.+++|++++++++.++   .
T Consensus       333 ~g~~~lEAma~G~PVI~g~~~~~~~-e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~-~~~~~~m~~~a~~~~~~~---~  407 (425)
T PRK05749        333 GGHNPLEPAAFGVPVISGPHTFNFK-EIFERLLQAGAAIQVEDAEDLAKAVTYLLTD-PDARQAYGEAGVAFLKQN---Q  407 (425)
T ss_pred             CCCCHHHHHHhCCCEEECCCccCHH-HHHHHHHHCCCeEEECCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhC---c
Confidence            99999999999999999865 3343 44433 245777777 999999999999998 899999999999999875   3


Q ss_pred             HHHHHHHHHHHHhcCC
Q 044542          448 KMASAYERFFLRMKNP  463 (465)
Q Consensus       448 ~~~~~~~~~~~~~~~~  463 (465)
                      ...+++.+++.+.+++
T Consensus       408 ~~~~~~~~~l~~~l~~  423 (425)
T PRK05749        408 GALQRTLQLLEPYLPP  423 (425)
T ss_pred             cHHHHHHHHHHHhccc
Confidence            6667777777766553

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.95  E-value=2.7e-26  Score=221.60  Aligned_cols=299  Identities=14%  Similarity=0.077  Sum_probs=195.5

Q ss_pred             CCCCcEEEecCCchh---HHhh---hcCCcEEEEecchhHHH-Hhh---hhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          153 DGAFDYVHTESVSLP---HWRA---KMVPNVAVTWHGIWYEV-MHS---KLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       153 ~~~~DiI~~~~~~~~---~~~~---~~~p~~v~~~h~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                      ..++||+|+|.|...   ..++   ..+| .|.|.|....-- +..   +++..+.....    .-...-...-.+...|
T Consensus       146 ~~~~dViH~HeWm~g~a~~~lK~~~~~Vp-tVfTtHAT~~GR~l~~g~~~~y~~l~~~~~----d~eA~~~~I~~r~~iE  220 (590)
T cd03793         146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVS-TIFTTHATLLGRYLCAGNVDFYNNLDYFDV----DKEAGKRGIYHRYCIE  220 (590)
T ss_pred             CCCCeEEEEcchhHhHHHHHHHHhCCCCC-EEEEecccccccccccCCcccchhhhhcch----hhhhhcccchHHHHHH
Confidence            457999999987321   1222   2456 999999643210 000   01111000000    0000001112223335


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCccc---------------CcccccccCCCCCCc
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA---------------GVRFPEKLGVPANVS  287 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~---------------~~~~r~~~g~~~~~~  287 (465)
                      +.....||.++++|+.++..+...|+.++++  |+|||+|.+.|.+..+.               +..++.+++++.+++
T Consensus       221 ~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~t  298 (590)
T cd03793         221 RAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKT  298 (590)
T ss_pred             HHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCe
Confidence            5778899999999999999999999998877  99999999998765421               223567788877775


Q ss_pred             EEEEEeecccc-ccCHHHHHHHHHHhhhc----CCC---eEEEEEeCCc-----------c-----hh------------
Q 044542          288 LVMGVAGRLVR-DKGHPLLYEAFSSITRD----HPG---VYLLVAGTGP-----------W-----GR------------  331 (465)
Q Consensus       288 ~~l~~~Grl~~-~Kg~~~ll~a~~~l~~~----~~~---~~l~ivG~g~-----------~-----~~------------  331 (465)
                      +++..+||+.. +||+|.+|+|++++...    +.+   +-|+++-...           .     ++            
T Consensus       299 li~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~  378 (590)
T cd03793         299 LYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKR  378 (590)
T ss_pred             EEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhh
Confidence            66644899988 99999999999998652    222   2344432210           0     00            


Q ss_pred             -------------------------------------------------------HHHHhc------CC--eEEcCC-CC
Q 044542          332 -------------------------------------------------------RYAELG------QN--VKVLGA-LE  347 (465)
Q Consensus       332 -------------------------------------------------------~~~~l~------~~--V~~~g~-v~  347 (465)
                                                                             .+++++      ++  |+|++. ++
T Consensus       379 ~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~  458 (590)
T cd03793         379 LFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLS  458 (590)
T ss_pred             hhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccC
Confidence                                                                   001111      22  344432 11


Q ss_pred             ------hhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcc---eeeeeeC-CceEEeC-------C-
Q 044542          348 ------AHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIV---RTVVVNE-ELGYTFS-------P-  409 (465)
Q Consensus       348 ------~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~---~e~v~~~-~~G~l~~-------~-  409 (465)
                            ..+..++|+.||++|+||.+ ||||++++|||+||+|||+|+.+|..   .|++.++ ..|+.+.       + 
T Consensus       459 ~~~~~~g~~y~E~~~g~dl~v~PS~y-E~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e  537 (590)
T cd03793         459 STNPLLGLDYEEFVRGCHLGVFPSYY-EPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDE  537 (590)
T ss_pred             CCCCcCCcchHHHhhhceEEEecccc-CCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHH
Confidence                  14578899999999999987 99999999999999999999999883   1455444 3566665       3 


Q ss_pred             CHHHHHHHHHHHHhCChHHHHHHHHHHH--HHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542          410 NVKSFVEALELVIRDGPKVLQRKGLACK--EHALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       410 d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      ++++++++|.++++.  +.++.+.++++  +.. +.|+|+++++.|.+.|.-.+.
T Consensus       538 ~v~~La~~m~~~~~~--~~r~~~~~r~~~~r~s-~~f~W~~~~~~Y~~A~~~Al~  589 (590)
T cd03793         538 SVQQLTQYMYEFCQL--SRRQRIIQRNRTERLS-DLLDWRNLGRYYRKARQLALS  589 (590)
T ss_pred             HHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhh
Confidence            688999999999865  35555555544  444 559999999999999987653

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.95  E-value=1.1e-25  Score=217.61  Aligned_cols=320  Identities=18%  Similarity=0.119  Sum_probs=205.3

Q ss_pred             ChHHHHHHHHHHHHHhCCcEEEEEeCCCC-CCCCCcccCCcceEEEe-ecCCCcc---------------c-cC------
Q 044542           96 GGMERHASTLYHALAARGHEIHVFTAPSD-RKPHNDVHQGNLHVHFA-ANDHGSV---------------N-LN------  151 (465)
Q Consensus        96 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~~---------------~-~~------  151 (465)
                      ++.-..-.+++..|+++||.|.++.+... ...... ......+... .......               . ..      
T Consensus        16 ~~~~~~~qhl~~~~a~~~~~vl~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (373)
T cd04950          16 DFLWQRPQHLAARLAERGNRVLYVEPPGLSRTPQPR-GRDWVRVVLRLRAALRRPRRLDPLIPARRRRLLRLLLNALLFW   94 (373)
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCccCCCCCC-CcccEEeeecccccccCccccCccccchhhhHHHHHHHHHHHH
Confidence            55556677889999988999999988654 111111 1111111110 0000000               0 00      


Q ss_pred             ----CCCCCcEEEecCCchhHHhhh--cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          152 ----NDGAFDYVHTESVSLPHWRAK--MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       152 ----~~~~~DiI~~~~~~~~~~~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                          .+.+..|++.+.+....+...  ..+ +++.++|.+....                 .......      ..+...
T Consensus        95 ~~~~~~~~~~i~~~~~P~~~~~~~~~~~~~-~Vyd~~D~~~~~~-----------------~~~~~~~------~~e~~~  150 (373)
T cd04950          95 AQLELGFGRPILWYYTPYTLPVAALLQASL-VVYDCVDDLSAFP-----------------GGPPELL------EAERRL  150 (373)
T ss_pred             HHHhcCCCCcEEEEeCccHHHHHhhcCCCe-EEEEcccchhccC-----------------CCCHHHH------HHHHHH
Confidence                145556666666544433332  233 7777777432110                 0000111      224477


Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHH
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLL  305 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~l  305 (465)
                      ++++|.++++|+...+.+.+ ++   .+++++|||+|.+.|.+........+..   ...+..+++|+|++.+.++++.+
T Consensus       151 ~~~ad~vi~~S~~l~~~~~~-~~---~~i~~i~ngvd~~~f~~~~~~~~~~~~~---~~~~~~~i~y~G~l~~~~d~~ll  223 (373)
T cd04950         151 LKRADLVFTTSPSLYEAKRR-LN---PNVVLVPNGVDYEHFAAARDPPPPPADL---AALPRPVIGYYGAIAEWLDLELL  223 (373)
T ss_pred             HHhCCEEEECCHHHHHHHhh-CC---CCEEEcccccCHHHhhcccccCCChhHH---hcCCCCEEEEEeccccccCHHHH
Confidence            89999999999999988877 44   7899999999998886643321111111   11233688899999997777655


Q ss_pred             HHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccC----CCCCcHHHHHHH
Q 044542          306 YEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLR----PQGLDLTLIEAM  379 (465)
Q Consensus       306 l~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~----~eg~~~~~~EAm  379 (465)
                      .++.+    ..|+++|+++|.++......++.  +||+++|+++++++..+|+.+|++++|+..    .+++|++++|||
T Consensus       224 ~~la~----~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~Eyl  299 (373)
T cd04950         224 EALAK----ARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYL  299 (373)
T ss_pred             HHHHH----HCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHh
Confidence            54443    34899999999873332333333  899999999999999999999999999753    246899999999


Q ss_pred             HcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          380 HCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       380 a~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      |||+|||+++.+...    ...+.+++.+.|+++++++|.+++.++.....+   ++++ +.+.|||++.++++.+.+.+
T Consensus       300 A~G~PVVat~~~~~~----~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~~  371 (373)
T cd04950         300 AAGKPVVATPLPEVR----RYEDEVVLIADDPEEFVAAIEKALLEDGPARER---RRLR-LAAQNSWDARAAEMLEALQE  371 (373)
T ss_pred             ccCCCEEecCcHHHH----hhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHHh
Confidence            999999999876543    333345555449999999999977653322221   2222 44559999999999976654

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.95  E-value=3.4e-27  Score=229.33  Aligned_cols=324  Identities=14%  Similarity=0.109  Sum_probs=221.2

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC--cc-c-------CCcce-EEEee----
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN--DV-H-------QGNLH-VHFAA----  142 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~-~-------~~~~~-v~~~~----  142 (465)
                      +.|||++++..+     .+|....+..++++|.++|++|++++.........  .. .       ...+. +.+..    
T Consensus         3 ~~~rili~t~~~-----G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~   77 (380)
T PRK13609          3 KNPKVLILTAHY-----GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVE   77 (380)
T ss_pred             CCCeEEEEEcCC-----CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccC
Confidence            357999999864     35888999999999999999877776554322110  00 0       00000 00000    


Q ss_pred             ---cC-C----------CccccCCCCCCcEEEecCCchhHH--hh---hcCCcEEEEecchhHHHHhhhhhhhhhhcCCC
Q 044542          143 ---ND-H----------GSVNLNNDGAFDYVHTESVSLPHW--RA---KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNG  203 (465)
Q Consensus       143 ---~~-~----------~~~~~~~~~~~DiI~~~~~~~~~~--~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  203 (465)
                         .. .          ......++.+||+||++.+.....  .+   .++| ++...++....                
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip-~~~~~td~~~~----------------  140 (380)
T PRK13609         78 KIYDKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIP-TYNVLTDFCLH----------------  140 (380)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCC-eEEEeCCCCCC----------------
Confidence               00 0          000111678999999986532211  11   2356 55544442100                


Q ss_pred             CCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCC
Q 044542          204 VLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVP  283 (465)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~  283 (465)
                                        ..++++++|.++++|+..++.+.+ +|++++++.+++++++.. |.... ....+++++|++
T Consensus       141 ------------------~~~~~~~ad~i~~~s~~~~~~l~~-~gi~~~ki~v~G~p~~~~-f~~~~-~~~~~~~~~~l~  199 (380)
T PRK13609        141 ------------------KIWVHREVDRYFVATDHVKKVLVD-IGVPPEQVVETGIPIRSS-FELKI-NPDIIYNKYQLC  199 (380)
T ss_pred             ------------------cccccCCCCEEEECCHHHHHHHHH-cCCChhHEEEECcccChH-HcCcC-CHHHHHHHcCCC
Confidence                              003467899999999999999988 689889999987777643 22211 123477889998


Q ss_pred             CCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEe-CC-cchhHHHHh----cCCeEEcCCCChhHHHHHHHh
Q 044542          284 ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAG-TG-PWGRRYAEL----GQNVKVLGALEAHQLSEFYNA  357 (465)
Q Consensus       284 ~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG-~g-~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~  357 (465)
                      +++++++++.|++...|+++.+++++.+.    ++++++++| .+ ...+.++++    .++|+++|++  +++.++|+.
T Consensus       200 ~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~--~~~~~l~~~  273 (380)
T PRK13609        200 PNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV--ENIDELFRV  273 (380)
T ss_pred             CCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech--hhHHHHHHh
Confidence            77767777889988889999988887643    678888774 33 234455443    2589999998  578999999


Q ss_pred             cCeEEecccCCCCCcHHHHHHHHcCCeEEecC-CCCcce---eeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHH
Q 044542          358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN-YPSIVR---TVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRK  432 (465)
Q Consensus       358 aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~-~gg~~~---e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~  432 (465)
                      ||+++.     ++.|++++|||++|+|||+++ .+|...   +.+.+  .|..+.. |+++++++|.+++++ ++.+++|
T Consensus       274 aD~~v~-----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~l~~~i~~ll~~-~~~~~~m  345 (380)
T PRK13609        274 TSCMIT-----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEEVFAKTEALLQD-DMKLLQM  345 (380)
T ss_pred             ccEEEe-----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHHHHHHHHHHHCC-HHHHHHH
Confidence            999884     234889999999999999986 454311   12222  3444444 999999999999998 8899999


Q ss_pred             HHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          433 GLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       433 ~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      ++++++.... ++++++++.+++++..
T Consensus       346 ~~~~~~~~~~-~s~~~i~~~i~~~~~~  371 (380)
T PRK13609        346 KEAMKSLYLP-EPADHIVDDILAENHV  371 (380)
T ss_pred             HHHHHHhCCC-chHHHHHHHHHHhhhh
Confidence            9999887655 7999999999988764

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.95  E-value=3.4e-27  Score=232.48  Aligned_cols=272  Identities=18%  Similarity=0.164  Sum_probs=193.8

Q ss_pred             CCcEEEecCCc---hhHHhhhc---CCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcc
Q 044542          155 AFDYVHTESVS---LPHWRAKM---VPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSS  228 (465)
Q Consensus       155 ~~DiI~~~~~~---~~~~~~~~---~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (465)
                      ..|+|++|++.   ++..+.+.   .| +.+.+|-.++.   .+.+..+.            ..    ..++   ..+-.
T Consensus       131 ~~d~iwihDyhl~llp~~lr~~~~~~~-i~~f~HipfP~---~e~~~~lp------------~~----~~ll---~~~l~  187 (460)
T cd03788         131 PGDLVWVHDYHLLLLPQMLRERGPDAR-IGFFLHIPFPS---SEIFRCLP------------WR----EELL---RGLLG  187 (460)
T ss_pred             CCCEEEEeChhhhHHHHHHHhhCCCCe-EEEEEeCCCCC---hHHHhhCC------------Ch----HHHH---HHHhc
Confidence            56999999874   33334332   34 88888864321   11111110            00    1111   23345


Q ss_pred             cCEEEEeChhHHHHHHHH----hC------------CCCCCEEEecCCCCCCCccCCcccC---cccccccCCCCCCcEE
Q 044542          229 YNQHICISNSAAEVLVKI----YQ------------LPQRNVHVILNGVDETKFVHDPEAG---VRFPEKLGVPANVSLV  289 (465)
Q Consensus       229 ~d~ii~~S~~~~~~~~~~----~~------------~~~~ki~vi~ngvd~~~~~~~~~~~---~~~r~~~g~~~~~~~~  289 (465)
                      +|.|.+.+......+.+.    .+            -...++.++|||||++.|.+.....   ...++..+...++ .+
T Consensus       188 ~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~  266 (460)
T cd03788         188 ADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGR-KL  266 (460)
T ss_pred             CCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCC-EE
Confidence            888888886555444432    11            1235789999999999887543221   1122233444444 67


Q ss_pred             EEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEEEeCC-----cch----hHHHHhc------------CCeE-Ec
Q 044542          290 MGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLVAGTG-----PWG----RRYAELG------------QNVK-VL  343 (465)
Q Consensus       290 l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g-----~~~----~~~~~l~------------~~V~-~~  343 (465)
                      |+++||+.+.||++.+++|++.+.+++|+    ++|+++|.+     +..    +.++++.            ..|+ +.
T Consensus       267 il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~  346 (460)
T cd03788         267 IVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLY  346 (460)
T ss_pred             EEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEe
Confidence            77999999999999999999999888776    678888643     222    2233221            1344 45


Q ss_pred             CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe----EEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHH
Q 044542          344 GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT----VLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEAL  418 (465)
Q Consensus       344 g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P----vI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i  418 (465)
                      |.++.+++..+|+.||++++||.+ ||+|++++|||+||+|    ||+|+.+|..+ .   +.+|+++++ |+++++++|
T Consensus       347 g~v~~~el~~~y~~aDv~v~pS~~-Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~-~---~~~g~lv~p~d~~~la~ai  421 (460)
T cd03788         347 RSLPREELAALYRAADVALVTPLR-DGMNLVAKEYVACQDDDPGVLILSEFAGAAE-E---LSGALLVNPYDIDEVADAI  421 (460)
T ss_pred             CCCCHHHHHHHHHhccEEEeCccc-cccCcccceeEEEecCCCceEEEeccccchh-h---cCCCEEECCCCHHHHHHHH
Confidence            788999999999999999999986 9999999999999999    99999888873 3   568999999 999999999


Q ss_pred             HHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 044542          419 ELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERF  456 (465)
Q Consensus       419 ~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~  456 (465)
                      .++++++++.++.+++++++++.+ |+++.+++++++-
T Consensus       422 ~~~l~~~~~e~~~~~~~~~~~v~~-~~~~~w~~~~l~~  458 (460)
T cd03788         422 HRALTMPLEERRERHRKLREYVRT-HDVQAWANSFLDD  458 (460)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHh
Confidence            999998678888999999999866 9999999998764

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.95  E-value=7.5e-26  Score=217.79  Aligned_cols=306  Identities=18%  Similarity=0.169  Sum_probs=209.7

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC----CCcc--------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND----HGSV--------  148 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~--------  148 (465)
                      ||++.+.      ..||..+++..++++|.++||+|++++....... ......+..+......    ...+        
T Consensus         1 ~~~~~~~------~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (350)
T cd03785           1 RILIAGG------GTGGHIFPALALAEELRERGAEVLFLGTKRGLEA-RLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFK   73 (350)
T ss_pred             CEEEEec------CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh-hcccccCCceEEEEecCcCCCChHHHHHHHHH
Confidence            4555554      4589999999999999999999999988653221 1111122223332221    0110        


Q ss_pred             ---------ccCCCCCCcEEEecCCc--hhHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542          149 ---------NLNNDGAFDYVHTESVS--LPHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE  214 (465)
Q Consensus       149 ---------~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (465)
                               ...++.+||+||+++..  +...   ...++| ++...|+...                           .
T Consensus        74 ~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p-~v~~~~~~~~---------------------------~  125 (350)
T cd03785          74 LLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIP-LVIHEQNAVP---------------------------G  125 (350)
T ss_pred             HHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCC-EEEEcCCCCc---------------------------c
Confidence                     11167899999998642  2211   123456 6554443110                           0


Q ss_pred             hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542          215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG  294 (465)
Q Consensus       215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G  294 (465)
                      ...     +..++.+|.++++|+...+.      ++..++.+++||+|.+.+.+.+.     +++++++++. .++++.|
T Consensus       126 ~~~-----~~~~~~~~~vi~~s~~~~~~------~~~~~~~~i~n~v~~~~~~~~~~-----~~~~~~~~~~-~~i~~~~  188 (350)
T cd03785         126 LAN-----RLLARFADRVALSFPETAKY------FPKDKAVVTGNPVREEILALDRE-----RARLGLRPGK-PTLLVFG  188 (350)
T ss_pred             HHH-----HHHHHhhCEEEEcchhhhhc------CCCCcEEEECCCCchHHhhhhhh-----HHhcCCCCCC-eEEEEEC
Confidence            111     13345689999999988765      35689999999999876654221     6677777766 4455666


Q ss_pred             ccccccCHHH-HHHHHHHhhhcCCCeE-EEEEeCCcchhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEEecccCC
Q 044542          295 RLVRDKGHPL-LYEAFSSITRDHPGVY-LLVAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRP  368 (465)
Q Consensus       295 rl~~~Kg~~~-ll~a~~~l~~~~~~~~-l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~  368 (465)
                      +....|+.+. +++|++.+.+  ++++ ++++|+|. .+.+++.    .++|++.|++  +++.++|+.||+++.++   
T Consensus       189 g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g~-~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~s---  260 (350)
T cd03785         189 GSQGARAINEAVPEALAELLR--KRLQVIHQTGKGD-LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISRA---  260 (350)
T ss_pred             CcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCcc-HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEECC---
Confidence            6656667654 5588888863  3555 55778873 3444332    3689999998  89999999999999754   


Q ss_pred             CCCcHHHHHHHHcCCeEEecCCCCc--------ceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542          369 QGLDLTLIEAMHCGRTVLTPNYPSI--------VRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACK  437 (465)
Q Consensus       369 eg~~~~~~EAma~G~PvI~s~~gg~--------~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~  437 (465)
                       | +++++|||++|+|||+++.++.        . +.+.+.++|+++++   |+++++++|.+++++ ++.+++|+++++
T Consensus       261 -g-~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~-~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~  336 (350)
T cd03785         261 -G-ASTVAELAALGLPAILIPLPYAADDHQTANA-RALVKAGAAVLIPQEELTPERLAAALLELLSD-PERLKAMAEAAR  336 (350)
T ss_pred             -C-HhHHHHHHHhCCCEEEeecCCCCCCcHHHhH-HHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHH
Confidence             2 5799999999999999876541        2 45666788999985   799999999999988 899999999999


Q ss_pred             HHHHhhCCHHHHHH
Q 044542          438 EHALSMFTATKMAS  451 (465)
Q Consensus       438 ~~~~~~fs~~~~~~  451 (465)
                      ++++. +..+++++
T Consensus       337 ~~~~~-~~~~~i~~  349 (350)
T cd03785         337 SLARP-DAAERIAD  349 (350)
T ss_pred             hcCCC-CHHHHHHh
Confidence            88765 67777654

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.95  E-value=3.1e-26  Score=223.57  Aligned_cols=271  Identities=17%  Similarity=0.191  Sum_probs=197.3

Q ss_pred             CCcEEEecCCc---hhHHhhhcCCc--EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhccc
Q 044542          155 AFDYVHTESVS---LPHWRAKMVPN--VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSY  229 (465)
Q Consensus       155 ~~DiI~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (465)
                      .-|+|++|++.   ++..+....|.  +.+.+|-.++.   .+++..+.            +-..    +   .+-+-.+
T Consensus       127 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~---~e~f~~lp------------~r~~----i---l~gll~~  184 (456)
T TIGR02400       127 PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPS---SEIYRTLP------------WRRE----L---LEGLLAY  184 (456)
T ss_pred             CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCC---hHHHhhCC------------cHHH----H---HHHHhcC
Confidence            34899999874   34444444432  66777754321   22222221            1111    1   1445688


Q ss_pred             CEEEEeChhHHHHHHHH----hCC-----------CCCCEEEecCCCCCCCccCCcccC------cccccccCCCCCCcE
Q 044542          230 NQHICISNSAAEVLVKI----YQL-----------PQRNVHVILNGVDETKFVHDPEAG------VRFPEKLGVPANVSL  288 (465)
Q Consensus       230 d~ii~~S~~~~~~~~~~----~~~-----------~~~ki~vi~ngvd~~~~~~~~~~~------~~~r~~~g~~~~~~~  288 (465)
                      |.|-+.+...++.+.+.    +|.           ...++.++|||||++.|.+.....      ..+|++++   +. .
T Consensus       185 dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~-~  260 (456)
T TIGR02400       185 DLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLK---GR-K  260 (456)
T ss_pred             CEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcC---CC-e
Confidence            99999888877766552    221           345788999999999886543211      12455542   33 6


Q ss_pred             EEEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEEEe-----CCcchh----HHHHh--------c-----CCeEE
Q 044542          289 VMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLVAG-----TGPWGR----RYAEL--------G-----QNVKV  342 (465)
Q Consensus       289 ~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG-----~g~~~~----~~~~l--------~-----~~V~~  342 (465)
                      +|+++||+.+.||++.+++|++++.+++|+    +.|+++|     +++..+    .++++        +     +.+.+
T Consensus       261 vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l  340 (456)
T TIGR02400       261 LIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYL  340 (456)
T ss_pred             EEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEE
Confidence            777999999999999999999999888775    5577775     233322    23333        1     12344


Q ss_pred             cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe----EEecCCCCcceeeeeeCCceEEeCC-CHHHHHHH
Q 044542          343 LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT----VLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEA  417 (465)
Q Consensus       343 ~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P----vI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~  417 (465)
                      .|.++.+++..+|++||++++||.+ ||+|++++||||||+|    +|+|+.+|.. +.+.   +|+++++ |+++++++
T Consensus       341 ~~~~~~~el~aly~aaDv~vv~S~~-EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~-~~l~---~gllVnP~d~~~lA~a  415 (456)
T TIGR02400       341 NRSYDREELMALYRAADVGLVTPLR-DGMNLVAKEYVAAQDPKDGVLILSEFAGAA-QELN---GALLVNPYDIDGMADA  415 (456)
T ss_pred             cCCCCHHHHHHHHHhCcEEEECccc-cccCccHHHHHHhcCCCCceEEEeCCCCCh-HHhC---CcEEECCCCHHHHHHH
Confidence            5688999999999999999999986 9999999999999999    9999998887 4442   7999999 99999999


Q ss_pred             HHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          418 LELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       418 i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      |.++++++++.++++.++.++++.+ ||++.+++++++-+
T Consensus       416 I~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l  454 (456)
T TIGR02400       416 IARALTMPLEEREERHRAMMDKLRK-NDVQRWREDFLSDL  454 (456)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHh
Confidence            9999998788899999999999877 89999999988754

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.95  E-value=1.6e-26  Score=224.34  Aligned_cols=330  Identities=9%  Similarity=0.069  Sum_probs=223.7

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC---cEEEEEeCCCCCCCCC-c-c-------cCCcceEE-Eee-
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG---HEIHVFTAPSDRKPHN-D-V-------HQGNLHVH-FAA-  142 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G---~~V~v~~~~~~~~~~~-~-~-------~~~~~~v~-~~~-  142 (465)
                      .++||||+++..+     .+|..+.+..|.++|.+.|   .+|.++-.-....... . .       ....+.+. ... 
T Consensus         3 ~~~~~vlil~~~~-----G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~   77 (391)
T PRK13608          3 TQNKKILIITGSF-----GNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYY   77 (391)
T ss_pred             CCCceEEEEECCC-----CchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            3467999999864     3788888999999998875   4565543332211111 0 0       00000000 000 


Q ss_pred             cCC--------------CccccCCCCCCcEEEecCCchhHHh-h----hcCCcEEEEecchhHHHHhhhhhhhhhhcCCC
Q 044542          143 NDH--------------GSVNLNNDGAFDYVHTESVSLPHWR-A----KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNG  203 (465)
Q Consensus       143 ~~~--------------~~~~~~~~~~~DiI~~~~~~~~~~~-~----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  203 (465)
                      ...              ......++.+||+|+++.+...... .    .++| ++....+....                
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~~~~l~~~~~~~iP-~~~v~td~~~~----------------  140 (391)
T PRK13608         78 SRPDKLDKCFYKYYGLNKLINLLIKEKPDLILLTFPTPVMSVLTEQFNINIP-VATVMTDYRLH----------------  140 (391)
T ss_pred             cCchhhHHHHHHHHHHHHHHHHHHHhCcCEEEECCcHHHHHHHHHhcCCCCC-EEEEeCCCCcc----------------
Confidence            000              0011116789999999765432221 1    2457 65544442100                


Q ss_pred             CCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCC
Q 044542          204 VLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVP  283 (465)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~  283 (465)
                               .         .++.+.+|.+++.|+.+++.+.+ .|++++++.+++++++.......  .....++++|++
T Consensus       141 ---------~---------~w~~~~~d~~~v~s~~~~~~l~~-~gi~~~ki~v~GiPv~~~f~~~~--~~~~~~~~~~l~  199 (391)
T PRK13608        141 ---------K---------NWITPYSTRYYVATKETKQDFID-VGIDPSTVKVTGIPIDNKFETPI--DQKQWLIDNNLD  199 (391)
T ss_pred             ---------c---------ccccCCCCEEEECCHHHHHHHHH-cCCCHHHEEEECeecChHhcccc--cHHHHHHHcCCC
Confidence                     0         03346789999999999999987 58999999999888875433222  234567788988


Q ss_pred             CCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHH-h--cCCeEEcCCCChhHHHHHHHhc
Q 044542          284 ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAE-L--GQNVKVLGALEAHQLSEFYNAL  358 (465)
Q Consensus       284 ~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~-l--~~~V~~~g~v~~~~~~~~~~~a  358 (465)
                      ++++.++++.|++...||++.+++++.+   ..++++++++ |.+. ..+.+++ +  .++|.++|++  +++.++|++|
T Consensus       200 ~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~--~~~~~~~~~a  274 (391)
T PRK13608        200 PDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYT--KHMNEWMASS  274 (391)
T ss_pred             CCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEecc--chHHHHHHhh
Confidence            7776777789999988999999998632   2367888665 5442 2233433 2  2689999998  6899999999


Q ss_pred             CeEEecccCCCCCcHHHHHHHHcCCeEEecCC-CCcce---eeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHH
Q 044542          359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNY-PSIVR---TVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGL  434 (465)
Q Consensus       359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~-gg~~~---e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~  434 (465)
                      |++|..     +.|+++.|||++|+|+|+++. +|..+   ..+.+.+.|+... |+++++++|.+++++ ++.+++|++
T Consensus       275 Dl~I~k-----~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~-~~~~l~~~i~~ll~~-~~~~~~m~~  347 (391)
T PRK13608        275 QLMITK-----PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD-TPEEAIKIVASLTNG-NEQLTNMIS  347 (391)
T ss_pred             hEEEeC-----CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC-CHHHHHHHHHHHhcC-HHHHHHHHH
Confidence            999962     347899999999999999863 33110   1233555666554 999999999999998 899999999


Q ss_pred             HHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542          435 ACKEHALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       435 ~~~~~~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      ++++..+. ++++.+++.+.+++..+.+
T Consensus       348 ~~~~~~~~-~s~~~i~~~l~~l~~~~~~  374 (391)
T PRK13608        348 TMEQDKIK-YATQTICRDLLDLIGHSSQ  374 (391)
T ss_pred             HHHHhcCC-CCHHHHHHHHHHHhhhhhh
Confidence            99998766 8999999999999876543

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.95  E-value=3.1e-25  Score=210.07  Aligned_cols=364  Identities=16%  Similarity=0.116  Sum_probs=253.8

Q ss_pred             CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh---------CCcEEEEEeCCCCCCCCC-------cccCCcceE
Q 044542           75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAA---------RGHEIHVFTAPSDRKPHN-------DVHQGNLHV  138 (465)
Q Consensus        75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~---------~G~~V~v~~~~~~~~~~~-------~~~~~~~~v  138 (465)
                      +.+..+++++.++..    ..||.++-....+-.+..         .|++|.+++.........       +.......+
T Consensus        30 ~~~~~~~~~~~~~~~----~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i  105 (495)
T KOG0853|consen   30 PEKPFEHVTFIHPDL----GIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPI  105 (495)
T ss_pred             ccccchhheeecccc----ccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCce
Confidence            345567899998874    669999988888888888         999999999876554211       111111111


Q ss_pred             --EE--eecCCC-ccccC------------------CCCCCcEEEecCCchhHHhhh---c---CCcEEEEecchhHHHH
Q 044542          139 --HF--AANDHG-SVNLN------------------NDGAFDYVHTESVSLPHWRAK---M---VPNVAVTWHGIWYEVM  189 (465)
Q Consensus       139 --~~--~~~~~~-~~~~~------------------~~~~~DiI~~~~~~~~~~~~~---~---~p~~v~~~h~~~~~~~  189 (465)
                        ..  .+...+ .+...                  ...+.|+|+........++..   +   +++..+.+|.......
T Consensus       106 ~vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~~~~~~l~~~~~~p~~~~~i~~~~h~~~~lla  185 (495)
T KOG0853|consen  106 LVVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFVSACVPLLKQLSGPDVIIKIYFYCHFPDSLLA  185 (495)
T ss_pred             EEEEeecCcccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchHHHHHHHHHHhcCCcccceeEEeccchHHHhc
Confidence              11  111111 00100                  225678888776644444332   2   3446777776543322


Q ss_pred             hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHh-CCCCCCEEEecCCCCCCCccC
Q 044542          190 HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIY-QLPQRNVHVILNGVDETKFVH  268 (465)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~-~~~~~ki~vi~ngvd~~~~~~  268 (465)
                      ...         +    .........+.+...  .....++.+++.|...+..+...+ .+...++.+.+.++|.+.+.+
T Consensus       186 ~r~---------g----~~~~l~~~~l~~~e~--e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~  250 (495)
T KOG0853|consen  186 KRL---------G----VLKVLYRHALDKIEE--ETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTY  250 (495)
T ss_pred             ccc---------C----ccceeehhhhhhhhh--hhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccc
Confidence            211         0    001111222222211  456788999999999999888765 344555899999999877664


Q ss_pred             C-----cccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcC-----CCeEEEEEeCC-------cchh
Q 044542          269 D-----PEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDH-----PGVYLLVAGTG-------PWGR  331 (465)
Q Consensus       269 ~-----~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~-----~~~~l~ivG~g-------~~~~  331 (465)
                      .     ...+...|...++...+ ..+.-+.++.+.||++.+++++..+....     ++.++.++|+.       ...+
T Consensus       251 ~~~~~~~~~~~~~r~~~~v~~~d-~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~  329 (495)
T KOG0853|consen  251 GQYESHLELRLPVRLYRGVSGID-RFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVE  329 (495)
T ss_pred             cccccchhcccccceeeeecccc-eEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHH
Confidence            2     22234455666766655 66678899999999999999999998776     46789999832       1122


Q ss_pred             HHHH-------h---cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeC
Q 044542          332 RYAE-------L---GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNE  401 (465)
Q Consensus       332 ~~~~-------l---~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~  401 (465)
                      ++++       +   ++.|.|+...++.+...+++.+.+++..... |.||++++|||+||+|||+++.||.. |++.++
T Consensus       330 ~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~-EiV~~~  407 (495)
T KOG0853|consen  330 YLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPA-EIVVHG  407 (495)
T ss_pred             HHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCce-EEEEcC
Confidence            2222       2   3778888888777777777777776653334 99999999999999999999999998 999999


Q ss_pred             CceEEeCCCHH---HHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          402 ELGYTFSPNVK---SFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       402 ~~G~l~~~d~~---~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      .+|++++++.+   .+++++.++.+| ++.+.+|++++++++++.|+|+++.+++.++..+..
T Consensus       408 ~tG~l~dp~~e~~~~~a~~~~kl~~~-p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~  469 (495)
T KOG0853|consen  408 VTGLLIDPGQEAVAELADALLKLRRD-PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL  469 (495)
T ss_pred             CcceeeCCchHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence            99999999666   699999999999 999999999999999999999999999999887543

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.94  E-value=4.2e-26  Score=221.11  Aligned_cols=221  Identities=14%  Similarity=0.125  Sum_probs=172.7

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP  303 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~  303 (465)
                      ++.+.+|.++++|+..++.+.+ +|++++++.+++++++.+.+.+. ..+..+|+++|++++. .+++++|+....|++.
T Consensus       146 w~~~~~d~~~~~s~~~~~~l~~-~g~~~~ki~v~g~~v~~~f~~~~-~~~~~~r~~~gl~~~~-~~il~~Gg~~g~~~~~  222 (382)
T PLN02605        146 WFHKGVTRCFCPSEEVAKRALK-RGLEPSQIRVYGLPIRPSFARAV-RPKDELRRELGMDEDL-PAVLLMGGGEGMGPLE  222 (382)
T ss_pred             cccCCCCEEEECCHHHHHHHHH-cCCCHHHEEEECcccCHhhccCC-CCHHHHHHHcCCCCCC-cEEEEECCCcccccHH
Confidence            4457899999999999999887 58999999999999987654332 2345688999998877 5666899988899999


Q ss_pred             HHHHHHHHhhh----cCCCeE-EEEEeCCc-chhHHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542          304 LLYEAFSSITR----DHPGVY-LLVAGTGP-WGRRYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL  375 (465)
Q Consensus       304 ~ll~a~~~l~~----~~~~~~-l~ivG~g~-~~~~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~  375 (465)
                      .+++++..+..    ..++.+ ++++|.+. ..+.+++..  .+|+++|++  +++.++|++||++|.++     .|+++
T Consensus       223 ~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~--~~~~~l~~aaDv~V~~~-----g~~ti  295 (382)
T PLN02605        223 ETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFV--TNMEEWMGACDCIITKA-----GPGTI  295 (382)
T ss_pred             HHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEecc--ccHHHHHHhCCEEEECC-----CcchH
Confidence            99999876531    124565 67788764 345555543  579999999  58999999999999854     26799


Q ss_pred             HHHHHcCCeEEecCC------CCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHH
Q 044542          376 IEAMHCGRTVLTPNY------PSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKM  449 (465)
Q Consensus       376 ~EAma~G~PvI~s~~------gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  449 (465)
                      +|||+||+|+|+++.      ++.  +.+.+++.|+.+. |+++++++|.+++.++++.+++|++++++.... .+.+.+
T Consensus       296 ~EAma~g~PvI~~~~~pgqe~gn~--~~i~~~g~g~~~~-~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~-~a~~~i  371 (382)
T PLN02605        296 AEALIRGLPIILNGYIPGQEEGNV--PYVVDNGFGAFSE-SPKEIARIVAEWFGDKSDELEAMSENALKLARP-EAVFDI  371 (382)
T ss_pred             HHHHHcCCCEEEecCCCccchhhH--HHHHhCCceeecC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-chHHHH
Confidence            999999999999984      232  2345566676653 999999999999987578889999999998877 588888


Q ss_pred             HHHHHHHHH
Q 044542          450 ASAYERFFL  458 (465)
Q Consensus       450 ~~~~~~~~~  458 (465)
                      ++.+.++..
T Consensus       372 ~~~l~~~~~  380 (382)
T PLN02605        372 VHDLHELVR  380 (382)
T ss_pred             HHHHHHHhh
Confidence            887776543

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.94  E-value=6.9e-25  Score=210.94  Aligned_cols=306  Identities=15%  Similarity=0.124  Sum_probs=198.9

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC----Cc--------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH----GS--------  147 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~--------  147 (465)
                      |||++++..      .||.......|+++|.++||+|++++....... ......+..++......    +.        
T Consensus         1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~-~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~   73 (348)
T TIGR01133         1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK-RLVPKAGIEFYFIPVGGLRRKGSFRLIKTPL   73 (348)
T ss_pred             CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh-cccccCCCceEEEeccCcCCCChHHHHHHHH
Confidence            689988864      366666667999999999999999986432111 11112233333332211    00        


Q ss_pred             ---------cccCCCCCCcEEEecCCc--hhHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhh
Q 044542          148 ---------VNLNNDGAFDYVHTESVS--LPHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ  213 (465)
Q Consensus       148 ---------~~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (465)
                               .++.++.+||+||++...  ....   ...++| ++...++..                           .
T Consensus        74 ~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~---------------------------~  125 (348)
T TIGR01133        74 KLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIP-LFHHEQNAV---------------------------P  125 (348)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCC-EEEECCCCC---------------------------c
Confidence                     011177899999998642  2222   122456 553322210                           0


Q ss_pred             hhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEe
Q 044542          214 EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVA  293 (465)
Q Consensus       214 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~  293 (465)
                      ...     ++..++.+|.++++|+.+++.+         +..+++||+|...+.+..     .+++++++++. .+++++
T Consensus       126 ~~~-----~~~~~~~~d~ii~~~~~~~~~~---------~~~~i~n~v~~~~~~~~~-----~~~~~~~~~~~-~~i~~~  185 (348)
T TIGR01133       126 GLT-----NKLLSRFAKKVLISFPGAKDHF---------EAVLVGNPVRQEIRSLPV-----PRERFGLREGK-PTILVL  185 (348)
T ss_pred             cHH-----HHHHHHHhCeeEECchhHhhcC---------CceEEcCCcCHHHhcccc-----hhhhcCCCCCC-eEEEEE
Confidence            011     1244567899999999876654         237999999876554321     13356676555 667788


Q ss_pred             eccccccCHHH-HHHHHHHhhhcCCCeEE-EEEeCCcchhHHHHhc---CCeEEcCCCChhHHHHHHHhcCeEEecccCC
Q 044542          294 GRLVRDKGHPL-LYEAFSSITRDHPGVYL-LVAGTGPWGRRYAELG---QNVKVLGALEAHQLSEFYNALDVFVNPTLRP  368 (465)
Q Consensus       294 Grl~~~Kg~~~-ll~a~~~l~~~~~~~~l-~ivG~g~~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~  368 (465)
                      |+....|++.. +++|++.+.+.  +.++ +++|+++. +.+++..   .-.....+.. .++.++|+.||++|.++   
T Consensus       186 gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~~-~~l~~~~~~~~l~~~v~~~~-~~~~~~l~~ad~~v~~~---  258 (348)
T TIGR01133       186 GGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKNDL-EKVKNVYQELGIEAIVTFID-ENMAAAYAAADLVISRA---  258 (348)
T ss_pred             CCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcchH-HHHHHHHhhCCceEEecCcc-cCHHHHHHhCCEEEECC---
Confidence            88777888654 55888888653  3454 44555433 4444322   1112223332 38999999999999753   


Q ss_pred             CCCcHHHHHHHHcCCeEEecCCCCcce------eeeeeCCceEEeCC-C--HHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542          369 QGLDLTLIEAMHCGRTVLTPNYPSIVR------TVVVNEELGYTFSP-N--VKSFVEALELVIRDGPKVLQRKGLACKEH  439 (465)
Q Consensus       369 eg~~~~~~EAma~G~PvI~s~~gg~~~------e~v~~~~~G~l~~~-d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~  439 (465)
                       | |++++|||++|+|+|+++.++..+      +++.++++|+++++ |  +++++++|.+++++ ++.+++|+++++++
T Consensus       259 -g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~  335 (348)
T TIGR01133       259 -G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKL  335 (348)
T ss_pred             -C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhc
Confidence             3 689999999999999998765321      36778889999987 5  99999999999998 89999999999888


Q ss_pred             HHhhCCHHHHHH
Q 044542          440 ALSMFTATKMAS  451 (465)
Q Consensus       440 ~~~~fs~~~~~~  451 (465)
                      +++ ...+++++
T Consensus       336 ~~~-~~~~~i~~  346 (348)
T TIGR01133       336 AKP-DAAKRIAE  346 (348)
T ss_pred             CCc-cHHHHHHh
Confidence            766 46666554

RL J Bacteriol 1993 Mar;175(6):1841-3

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=1e-23  Score=185.93  Aligned_cols=358  Identities=13%  Similarity=0.131  Sum_probs=246.6

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCC---------cccCCcceEEEeecCCC---
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHN---------DVHQGNLHVHFAANDHG---  146 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~---------~~~~~~~~v~~~~~~~~---  146 (465)
                      .+++++++.   ...||+|++++.-.+.+++.  .+...+++.+.......         ++..+...+.+...+.+   
T Consensus        45 tvgfFHPYC---NAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lV  121 (465)
T KOG1387|consen   45 TVGFFHPYC---NAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLV  121 (465)
T ss_pred             EEEEecccc---cCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeee
Confidence            689998876   57789999999999999876  34444444432221111         12222233333332221   


Q ss_pred             ---ccccC-----------------CCCCCcEEEecC-Cc--hhHHh-hhcCCcEEEEecchhHHHHhhhhhhhhhhcCC
Q 044542          147 ---SVNLN-----------------NDGAFDYVHTES-VS--LPHWR-AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQN  202 (465)
Q Consensus       147 ---~~~~~-----------------~~~~~DiI~~~~-~~--~~~~~-~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~  202 (465)
                         .|...                 -+..|||.+-.. +.  ++... .+++| ++...|-..   ...++...+..++.
T Consensus       122 ea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~-V~aYvHYP~---iS~DML~~l~qrq~  197 (465)
T KOG1387|consen  122 EASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIP-VVAYVHYPT---ISTDMLKKLFQRQK  197 (465)
T ss_pred             ecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCc-eEEEEeccc---ccHHHHHHHHhhhh
Confidence               12111                 578899987653 32  22222 34677 888888532   23444444443332


Q ss_pred             CCCCCchhhh-hhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccC
Q 044542          203 GVLPGSMTEL-QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLG  281 (465)
Q Consensus       203 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g  281 (465)
                      .....+.+.. ++++..+..  ..-..||.+++.|.+..+.+.+.++.  .++.+++++++++.+......         
T Consensus       198 s~~l~~~KlaY~rlFa~lY~--~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~~~t---------  264 (465)
T KOG1387|consen  198 SGILVWGKLAYWRLFALLYQ--SAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSKFGT---------  264 (465)
T ss_pred             cchhhhHHHHHHHHHHHHHH--hccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHHhcc---------
Confidence            2111122222 222223222  55578899999999999999998875  789999999998754332211         


Q ss_pred             CCCCCcEEEEEeeccccccCHHHHHHHHH--Hhhh----cCCCeEEEEEeCCcc---hhHHHHh-------c--CCeEEc
Q 044542          282 VPANVSLVMGVAGRLVRDKGHPLLYEAFS--SITR----DHPGVYLLVAGTGPW---GRRYAEL-------G--QNVKVL  343 (465)
Q Consensus       282 ~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~--~l~~----~~~~~~l~ivG~g~~---~~~~~~l-------~--~~V~~~  343 (465)
                       ...+...++++|.+.|+|++. +++.++  ..+.    ..++++|+++|+...   +++++.|       .  ++|.|.
T Consensus       265 -e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~  342 (465)
T KOG1387|consen  265 -EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFE  342 (465)
T ss_pred             -cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEE
Confidence             123336788999999999999 554443  3322    225799999997432   3333332       2  789999


Q ss_pred             CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeC---CceEEeCCCHHHHHHHHHH
Q 044542          344 GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNE---ELGYTFSPNVKSFVEALEL  420 (465)
Q Consensus       344 g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~---~~G~l~~~d~~~la~~i~~  420 (465)
                      -.+|.+++..+|..|.+.|+.. +.|.||+.+.|+||+|+-+|+.+.||..-++|.+.   .+|++.+ +.++.++++.+
T Consensus       343 ~N~Py~~lv~lL~~a~iGvh~M-wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~-t~~EYaE~iLk  420 (465)
T KOG1387|consen  343 KNVPYEKLVELLGKATIGVHTM-WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP-TDEEYAEAILK  420 (465)
T ss_pred             ecCCHHHHHHHhccceeehhhh-hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC-ChHHHHHHHHH
Confidence            9999999999999999999976 57999999999999999999999988776777653   4688886 88999999999


Q ss_pred             HHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542          421 VIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       421 ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                      ++..+++.+..|+++||..+.+ |+..+.-+.+...+.+++.+
T Consensus       421 Iv~~~~~~r~~~r~~AR~s~~R-FsE~~F~kd~~~~i~kll~e  462 (465)
T KOG1387|consen  421 IVKLNYDERNMMRRNARKSLAR-FGELKFDKDWENPICKLLEE  462 (465)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHH-hhHHHHHHhHhHHHHHhhcc
Confidence            9998788888999999988766 99999999999999888765

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.93  E-value=1.9e-25  Score=192.06  Aligned_cols=159  Identities=30%  Similarity=0.610  Sum_probs=137.6

Q ss_pred             ccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhc-CCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChh
Q 044542          277 PEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRD-HPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAH  349 (465)
Q Consensus       277 r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~-~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~  349 (465)
                      +.+.+.+.++ .+++++|++.+.||++.+++|+..+.++ .++++++|+|.+.....++.+    .  +++.++|.++.+
T Consensus         6 ~~~~~~~~~~-~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   84 (172)
T PF00534_consen    6 REKLKIPDKK-KIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDD   84 (172)
T ss_dssp             HHHTTT-TTS-EEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHH
T ss_pred             HHHcCCCCCC-eEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccccccc
Confidence            4444545454 8888999999999999999999999864 689999999977665544432    2  899999999999


Q ss_pred             HHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHH
Q 044542          350 QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKV  428 (465)
Q Consensus       350 ~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~  428 (465)
                      ++..+|+.||++++||.+ |++|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.
T Consensus        85 ~l~~~~~~~di~v~~s~~-e~~~~~~~Ea~~~g~pvI~~~~~~~~-e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~-~~~  161 (172)
T PF00534_consen   85 ELDELYKSSDIFVSPSRN-EGFGLSLLEAMACGCPVIASDIGGNN-EIINDGVNGFLFDPNDIEELADAIEKLLND-PEL  161 (172)
T ss_dssp             HHHHHHHHTSEEEE-BSS-BSS-HHHHHHHHTT-EEEEESSTHHH-HHSGTTTSEEEESTTSHHHHHHHHHHHHHH-HHH
T ss_pred             ccccccccceeccccccc-cccccccccccccccceeeccccCCc-eeeccccceEEeCCCCHHHHHHHHHHHHCC-HHH
Confidence            999999999999999987 99999999999999999999999988 89999999999999 999999999999999 899


Q ss_pred             HHHHHHHHHHH
Q 044542          429 LQRKGLACKEH  439 (465)
Q Consensus       429 ~~~~~~~~~~~  439 (465)
                      ++.|+++++++
T Consensus       162 ~~~l~~~~~~~  172 (172)
T PF00534_consen  162 RQKLGKNARER  172 (172)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHhcCC
Confidence            99999999875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.92  E-value=9.4e-24  Score=218.59  Aligned_cols=275  Identities=17%  Similarity=0.198  Sum_probs=195.7

Q ss_pred             cEEEecCCc---hhHHhhhcCCc--EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCE
Q 044542          157 DYVHTESVS---LPHWRAKMVPN--VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQ  231 (465)
Q Consensus       157 DiI~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  231 (465)
                      |+|.+|.+.   ++..+....|.  +.+.+|-.++.   +++++.+.            +-.    .+   .+-+-.||.
T Consensus       149 d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs---~e~fr~lp------------~r~----~i---l~gll~aDl  206 (797)
T PLN03063        149 DVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPS---SEIYKTLP------------SRS----EL---LRAVLTADL  206 (797)
T ss_pred             CEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCC---HHHHhhCC------------CHH----HH---HHHHhcCCE
Confidence            788888874   34445444332  67777765432   22222221            001    11   134457788


Q ss_pred             EEEeChhHHHHHHHH----hCC-----------CCCCEEEecCCCCCCCccCCcccC------cccccccCCCCCCcEEE
Q 044542          232 HICISNSAAEVLVKI----YQL-----------PQRNVHVILNGVDETKFVHDPEAG------VRFPEKLGVPANVSLVM  290 (465)
Q Consensus       232 ii~~S~~~~~~~~~~----~~~-----------~~~ki~vi~ngvd~~~~~~~~~~~------~~~r~~~g~~~~~~~~l  290 (465)
                      |-+.+....+.+.+.    .+.           ...++.++|||||.+.|.+.....      ..++++++   ++ .+|
T Consensus       207 igF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~-~lI  282 (797)
T PLN03063        207 IGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA---GR-KVI  282 (797)
T ss_pred             EEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC---CC-eEE
Confidence            888887777666541    122           125789999999998886532211      12333332   33 566


Q ss_pred             EEeeccccccCHHHHHHHHHHhhhcCCCeE----EEEEe-----CCcchh----HHHHhc----C--------CeE-EcC
Q 044542          291 GVAGRLVRDKGHPLLYEAFSSITRDHPGVY----LLVAG-----TGPWGR----RYAELG----Q--------NVK-VLG  344 (465)
Q Consensus       291 ~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~----l~ivG-----~g~~~~----~~~~l~----~--------~V~-~~g  344 (465)
                      +++||+.+.||++.+++|++.+.+++|+++    |+.++     +++..+    .++++.    .        .|+ +.+
T Consensus       283 l~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~  362 (797)
T PLN03063        283 LGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDC  362 (797)
T ss_pred             EEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecC
Confidence            699999999999999999999988888753    44333     222222    233332    1        122 345


Q ss_pred             CCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe----EEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542          345 ALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT----VLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALE  419 (465)
Q Consensus       345 ~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P----vI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~  419 (465)
                      .++.+++..+|+.||++++||.+ ||+|++++|||+||+|    +|+|+.+|.. +.+  +..|++++| |+++++++|.
T Consensus       363 ~v~~~el~aly~~ADvfvvtSlr-EGmnLv~lEamA~g~p~~gvlVlSe~~G~~-~~l--~~~allVnP~D~~~lA~AI~  438 (797)
T PLN03063        363 SVDFNYLCALYAITDVMLVTSLR-DGMNLVSYEFVACQKAKKGVLVLSEFAGAG-QSL--GAGALLVNPWNITEVSSAIK  438 (797)
T ss_pred             CCCHHHHHHHHHhCCEEEeCccc-cccCcchhhHheeecCCCCCEEeeCCcCch-hhh--cCCeEEECCCCHHHHHHHHH
Confidence            78999999999999999999987 9999999999999999    9999999988 443  557999999 9999999999


Q ss_pred             HHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542          420 LVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       420 ~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      +++..+++++++..++.++++.+ ++|+..++.+++.++++..
T Consensus       439 ~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~fl~~l~~~~~  480 (797)
T PLN03063        439 EALNMSDEERETRHRHNFQYVKT-HSAQKWADDFMSELNDIIV  480 (797)
T ss_pred             HHHhCCHHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHHHhh
Confidence            99997688888888899999888 7999999999998887653

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.91  E-value=1.3e-22  Score=192.73  Aligned_cols=281  Identities=15%  Similarity=0.054  Sum_probs=192.4

Q ss_pred             CCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cccCCcceEEEeecCCCccccCCCCCC-cEEEecCCchhH---
Q 044542           94 APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DVHQGNLHVHFAANDHGSVNLNNDGAF-DYVHTESVSLPH---  168 (465)
Q Consensus        94 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~-DiI~~~~~~~~~---  168 (465)
                      ...|+...-....+.+.+.|+++.-+.......... +...            .........++ |+||++++.+..   
T Consensus        13 ~~~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Dvv~~~~P~~~~~~~   80 (333)
T PRK09814         13 GNSAALKAKNDVTKIAKQLGFEELGIYFYNIKRDSLSERSK------------RLDGILASLKPGDIVIFQFPTWNGFEF   80 (333)
T ss_pred             ccchHHHHHHHHHHHHHHCCCeEeEEEecccccchHHHHHH------------HHHHHHhcCCCCCEEEEECCCCchHHH
Confidence            445667777888999999999876655432111100 0000            00011123455 999998764321   


Q ss_pred             ------Hhhh-cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHH
Q 044542          169 ------WRAK-MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAE  241 (465)
Q Consensus       169 ------~~~~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~  241 (465)
                            .+.+ +.| ++..+||.+.......                 ...      ...++.+++++|.++++|+.+++
T Consensus        81 ~~~~~~~~k~~~~k-~i~~ihD~~~~~~~~~-----------------~~~------~~~~~~~~~~aD~iI~~S~~~~~  136 (333)
T PRK09814         81 DRLFVDKLKKKQVK-IIILIHDIEPLRFDSN-----------------YYL------MKEEIDMLNLADVLIVHSKKMKD  136 (333)
T ss_pred             HHHHHHHHHHcCCE-EEEEECCcHHHhcccc-----------------chh------hHHHHHHHHhCCEEEECCHHHHH
Confidence                  1111 356 9999999765321100                 011      11234778899999999999999


Q ss_pred             HHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEE
Q 044542          242 VLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL  321 (465)
Q Consensus       242 ~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l  321 (465)
                      .+.+ .|++..++.++++..+......        +..   +.. ...++|+|++....++    +      +..++++|
T Consensus       137 ~l~~-~g~~~~~i~~~~~~~~~~~~~~--------~~~---~~~-~~~i~yaG~l~k~~~l----~------~~~~~~~l  193 (333)
T PRK09814        137 RLVE-EGLTTDKIIVQGIFDYLNDIEL--------VKT---PSF-QKKINFAGNLEKSPFL----K------NWSQGIKL  193 (333)
T ss_pred             HHHH-cCCCcCceEecccccccccccc--------ccc---ccC-CceEEEecChhhchHH----H------hcCCCCeE
Confidence            9988 6887788888776554321111        000   112 2578899999843321    1      12367899


Q ss_pred             EEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccC----------CCCCcHHHHHHHHcCCeEEecCCC
Q 044542          322 LVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR----------PQGLDLTLIEAMHCGRTVLTPNYP  391 (465)
Q Consensus       322 ~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~----------~eg~~~~~~EAma~G~PvI~s~~g  391 (465)
                      +++|+|+..+   ...++|+|+|+++++++..+|+. |+.+.+...          .-++|.++.|+||||+|||+++.+
T Consensus       194 ~i~G~g~~~~---~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~  269 (333)
T PRK09814        194 TVFGPNPEDL---ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKA  269 (333)
T ss_pred             EEECCCcccc---ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCc
Confidence            9999987654   34489999999999999999998 766654311          136899999999999999999999


Q ss_pred             CcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHh
Q 044542          392 SIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALS  442 (465)
Q Consensus       392 g~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~  442 (465)
                      +.. +++.++.+|++++ +.+++++++.++  + ++.+++|++++++.++.
T Consensus       270 ~~~-~~V~~~~~G~~v~-~~~el~~~l~~~--~-~~~~~~m~~n~~~~~~~  315 (333)
T PRK09814        270 AIA-DFIVENGLGFVVD-SLEELPEIIDNI--T-EEEYQEMVENVKKISKL  315 (333)
T ss_pred             cHH-HHHHhCCceEEeC-CHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHH
Confidence            998 9999999999998 788999999985  2 56788999999988766

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.91  E-value=1.3e-22  Score=182.56  Aligned_cols=216  Identities=28%  Similarity=0.366  Sum_probs=157.9

Q ss_pred             EEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEEEe
Q 044542           82 LAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHT  161 (465)
Q Consensus        82 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI~~  161 (465)
                      |++++..++  +..||.+++...+++.|++.||+|+++.                     ......+...++.+||+||+
T Consensus         1 i~~i~~~~~--~~~~G~~~~~~~l~~~L~~~g~~v~v~~---------------------~~~~~~~~~~~~~~~D~i~~   57 (229)
T cd01635           1 ILLVSTPLL--PGGGGVELVLLDLAKALARRGHEVEVVA---------------------LLLLLLLRILRGFKPDVVHA   57 (229)
T ss_pred             CeeeccccC--CCCCCchhHHHHHHHHHHHcCCeEEEEE---------------------echHHHHHHHhhcCCCEEEE
Confidence            466666654  3579999999999999999999999999                     00001122224578999999


Q ss_pred             cCCchhHH------hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEe
Q 044542          162 ESVSLPHW------RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICI  235 (465)
Q Consensus       162 ~~~~~~~~------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~  235 (465)
                      ++......      ...+.| ++.+.|+.+.......                   ......      .....++..   
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~-------------------~~~~~~------~~~~~~~~~---  108 (229)
T cd01635          58 HGYYPAPLALLLAARLLGIP-LVLTVHGVNRSLLEGV-------------------PLSLLA------LSIGLADKV---  108 (229)
T ss_pred             cCCCcHHHHHHHHHhhCCCC-EEEEEcCccHhhcccC-------------------cHHHHH------HHHhhcceE---
Confidence            98643322      233556 9999998764321100                   000000      000011111   


Q ss_pred             ChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhc
Q 044542          236 SNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRD  315 (465)
Q Consensus       236 S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~  315 (465)
                                                                              ++|++.+.||++.+++++..+.++
T Consensus       109 --------------------------------------------------------~~g~~~~~k~~~~~~~a~~~l~~~  132 (229)
T cd01635         109 --------------------------------------------------------FVGRLAPEKGLDDLIEAFALLKER  132 (229)
T ss_pred             --------------------------------------------------------EEEeecccCCHHHHHHHHHHHHHh
Confidence                                                                    889999999999999999999988


Q ss_pred             CCCeEEEEEeCCcchhHHHH----h--cCCeEEcCCC-ChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          316 HPGVYLLVAGTGPWGRRYAE----L--GQNVKVLGAL-EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       316 ~~~~~l~ivG~g~~~~~~~~----l--~~~V~~~g~v-~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      +++++++++|.+......++    +  .++|.++|++ +.+++..+++.||++++|+.. |++|++++|||++|+|+|++
T Consensus       133 ~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~-e~~~~~~~Eam~~g~pvi~s  211 (229)
T cd01635         133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLR-EGFGLVVLEAMACGLPVIAT  211 (229)
T ss_pred             CCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccc-cCcChHHHHHHhCCCCEEEc
Confidence            88999999999877655442    2  2899999998 445566666669999999975 89999999999999999999


Q ss_pred             CCCCcceeeeeeCCceEEe
Q 044542          389 NYPSIVRTVVVNEELGYTF  407 (465)
Q Consensus       389 ~~gg~~~e~v~~~~~G~l~  407 (465)
                      +.++.. |++.++++|+++
T Consensus       212 ~~~~~~-e~i~~~~~g~~~  229 (229)
T cd01635         212 DVGGPP-EIVEDGLTGLLV  229 (229)
T ss_pred             CCCCcc-eEEECCCceEEC
Confidence            999998 888888899874

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.90  E-value=1.3e-22  Score=195.93  Aligned_cols=332  Identities=14%  Similarity=0.110  Sum_probs=207.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCccc-C-C-cceEEEeecCCC-c-------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHNDVH-Q-G-NLHVHFAANDHG-S-------  147 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~-~-~-~~~v~~~~~~~~-~-------  147 (465)
                      |||++++..-|       --..+..+.++|.+. +.++.++....+.....++. . . ...+.......+ .       
T Consensus         1 ~~i~~~~gtr~-------~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   73 (365)
T TIGR00236         1 LKVSIVLGTRP-------EAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSN   73 (365)
T ss_pred             CeEEEEEecCH-------HHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHH
Confidence            69999986532       123477888999876 66766666655432111211 1 1 112222211111 0       


Q ss_pred             -----cccCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhh
Q 044542          148 -----VNLNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAM  216 (465)
Q Consensus       148 -----~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (465)
                           ....++.+||+||+|+..   +.   .....++| ++..-+|....    +.+       .+        +....
T Consensus        74 ~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ip-v~h~~~g~~s~----~~~-------~~--------~~~~~  133 (365)
T TIGR00236        74 MLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIP-VGHVEAGLRTG----DRY-------SP--------MPEEI  133 (365)
T ss_pred             HHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCC-EEEEeCCCCcC----CCC-------CC--------CccHH
Confidence                 011178889999999642   21   22334678 66554442100    000       00        00000


Q ss_pred             HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEEeec
Q 044542          217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGR  295 (465)
Q Consensus       217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Gr  295 (465)
                      .+.    ...+.+|.++++|+..++.+.+ .|++++++.+++||+ |.............++++++.  +++++++..+|
T Consensus       134 ~r~----~~~~~ad~~~~~s~~~~~~l~~-~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~--~~~~vl~~~hr  206 (365)
T TIGR00236       134 NRQ----LTGHIADLHFAPTEQAKDNLLR-ENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGE--DKRYILLTLHR  206 (365)
T ss_pred             HHH----HHHHHHHhccCCCHHHHHHHHH-cCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCC--CCCEEEEecCc
Confidence            010    1123478999999999999987 599999999999996 432221111112345566652  23356544445


Q ss_pred             cc-cccCHHHHHHHHHHhhhcCCCeEEEEEeCCc--chhHHHH-hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          296 LV-RDKGHPLLYEAFSSITRDHPGVYLLVAGTGP--WGRRYAE-LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       296 l~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~-l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      .. ..||++.+++|+.++.+++|+++++++|.+.  ..+.+.+ ++  ++|+++|.++..++..+++.+|+++.+|    
T Consensus       207 ~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S----  282 (365)
T TIGR00236       207 RENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS----  282 (365)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC----
Confidence            42 3589999999999998777889988886432  2222222 33  6899999999999999999999998876    


Q ss_pred             CCcHHHHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHH
Q 044542          370 GLDLTLIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATK  448 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  448 (465)
                        |..++|||++|+|||++ +.++.. +++.++ .+.+++.|++++++++.+++++ ++.+++++++...+.. ..++++
T Consensus       283 --g~~~~EA~a~g~PvI~~~~~~~~~-e~~~~g-~~~lv~~d~~~i~~ai~~ll~~-~~~~~~~~~~~~~~g~-~~a~~r  356 (365)
T TIGR00236       283 --GGVQEEAPSLGKPVLVLRDTTERP-ETVEAG-TNKLVGTDKENITKAAKRLLTD-PDEYKKMSNASNPYGD-GEASER  356 (365)
T ss_pred             --hhHHHHHHHcCCCEEECCCCCCCh-HHHhcC-ceEEeCCCHHHHHHHHHHHHhC-hHHHHHhhhcCCCCcC-chHHHH
Confidence              34689999999999996 667766 666655 5666755999999999999998 7888888766533332 245566


Q ss_pred             HHHHHHH
Q 044542          449 MASAYER  455 (465)
Q Consensus       449 ~~~~~~~  455 (465)
                      +++.+.+
T Consensus       357 i~~~l~~  363 (365)
T TIGR00236       357 IVEELLN  363 (365)
T ss_pred             HHHHHHh
Confidence            6555544

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.90  E-value=9.5e-23  Score=211.87  Aligned_cols=273  Identities=18%  Similarity=0.171  Sum_probs=191.6

Q ss_pred             CcEEEecCCc---hhHHhhhcCC--cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccC
Q 044542          156 FDYVHTESVS---LPHWRAKMVP--NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYN  230 (465)
Q Consensus       156 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (465)
                      -|+|.+|++.   ++..+....|  ++.+.+|-.++.   .+.+..+.                +-..+   ..-+-.+|
T Consensus       134 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~---~~~f~~lp----------------~~~~l---l~~ll~~D  191 (726)
T PRK14501        134 GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS---FEVFRLLP----------------WREEI---LEGLLGAD  191 (726)
T ss_pred             CCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCC---hHHHhhCC----------------ChHHH---HHHHhcCC
Confidence            3899999874   3444444333  267777765432   22222111                00111   13456788


Q ss_pred             EEEEeChhHHHHHHHH----hCC-----------CCCCEEEecCCCCCCCccCCcccC------cccccccCCCCCCcEE
Q 044542          231 QHICISNSAAEVLVKI----YQL-----------PQRNVHVILNGVDETKFVHDPEAG------VRFPEKLGVPANVSLV  289 (465)
Q Consensus       231 ~ii~~S~~~~~~~~~~----~~~-----------~~~ki~vi~ngvd~~~~~~~~~~~------~~~r~~~g~~~~~~~~  289 (465)
                      .|-+.+....+.+.+.    ++.           ...++.++|||||++.|.+.....      ..+|+.+   .+. .+
T Consensus       192 ligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~~  267 (726)
T PRK14501        192 LIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGR-KI  267 (726)
T ss_pred             eEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCC-EE
Confidence            8888777766655442    221           123689999999999987643211      1133332   233 57


Q ss_pred             EEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEEEeCC-----cc----hhHHHHhc-------------CCeEEc
Q 044542          290 MGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLVAGTG-----PW----GRRYAELG-------------QNVKVL  343 (465)
Q Consensus       290 l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g-----~~----~~~~~~l~-------------~~V~~~  343 (465)
                      ++++||+.+.||+..+++|++++.+++|+    ++|+++|.+     +.    ++.++++.             +.+.+.
T Consensus       268 il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~  347 (726)
T PRK14501        268 ILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFY  347 (726)
T ss_pred             EEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEe
Confidence            77999999999999999999999888875    678888732     21    12222221             134577


Q ss_pred             CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcC-----CeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHH
Q 044542          344 GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG-----RTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEA  417 (465)
Q Consensus       344 g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G-----~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~  417 (465)
                      |.++.+++..+|+.||++++||.+ ||+|++++|||+||     .||++...|+.. ++.    .|++++| |+++++++
T Consensus       348 ~~~~~~~l~~ly~~aDv~v~~S~~-EG~~lv~~Eama~~~~~~g~~vls~~~G~~~-~l~----~~llv~P~d~~~la~a  421 (726)
T PRK14501        348 RSLPFEELVALYRAADVALVTPLR-DGMNLVAKEYVASRTDGDGVLILSEMAGAAA-ELA----EALLVNPNDIEGIAAA  421 (726)
T ss_pred             CCCCHHHHHHHHHhccEEEecccc-cccCcccceEEEEcCCCCceEEEecccchhH-HhC----cCeEECCCCHHHHHHH
Confidence            899999999999999999999987 99999999999994     466776677765 553    4899999 99999999


Q ss_pred             HHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          418 LELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       418 i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      |.+++.++++.+.+..+++++++.+ |||+.+++++++.|+++.
T Consensus       422 i~~~l~~~~~e~~~r~~~~~~~v~~-~~~~~w~~~~l~~l~~~~  464 (726)
T PRK14501        422 IKRALEMPEEEQRERMQAMQERLRR-YDVHKWASDFLDELREAA  464 (726)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHH
Confidence            9999998555666666788999865 999999999999998874

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.88  E-value=1e-21  Score=191.05  Aligned_cols=307  Identities=14%  Similarity=0.060  Sum_probs=194.1

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCcc----------
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSV----------  148 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------  148 (465)
                      +|||++++.      ..||.-.-.. ++++|++.++++.++................ ..+..... +.+          
T Consensus         1 ~~ki~i~~G------gt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~-g~~~~~~~~~~~~   71 (380)
T PRK00025          1 PLRIAIVAG------EVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCESLF-DMEELAVM-GLVEVLPRLPRLL   71 (380)
T ss_pred             CceEEEEec------CcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCcccc-CHHHhhhc-cHHHHHHHHHHHH
Confidence            479998875      4567554444 9999999888888887554321111111110 00000000 100          


Q ss_pred             -------ccCCCCCCcEEEecCCc-hhH-----HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542          149 -------NLNNDGAFDYVHTESVS-LPH-----WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA  215 (465)
Q Consensus       149 -------~~~~~~~~DiI~~~~~~-~~~-----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (465)
                             ...++.+||+||++++. ...     ....++| ++...++....                       +..+.
T Consensus        72 ~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip-~i~~~~~~~~~-----------------------~~~~~  127 (380)
T PRK00025         72 KIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIP-TIHYVSPSVWA-----------------------WRQGR  127 (380)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCC-EEEEeCCchhh-----------------------cCchH
Confidence                   01168899999997642 111     1224677 66654431000                       01111


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeec
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGR  295 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Gr  295 (465)
                      ..      ...+.+|.+++.|+..++.+.+ +|+   ++.++.|++.....  ....+...+++++++++++.++++.|.
T Consensus       128 ~~------~~~~~~d~i~~~~~~~~~~~~~-~g~---~~~~~G~p~~~~~~--~~~~~~~~~~~l~~~~~~~~il~~~gs  195 (380)
T PRK00025        128 AF------KIAKATDHVLALFPFEAAFYDK-LGV---PVTFVGHPLADAIP--LLPDRAAARARLGLDPDARVLALLPGS  195 (380)
T ss_pred             HH------HHHHHHhhheeCCccCHHHHHh-cCC---CeEEECcCHHHhcc--cccChHHHHHHcCCCCCCCEEEEECCC
Confidence            11      2356789999999999988876 554   36777776643221  111234567788888776555555563


Q ss_pred             -cccc-cCHHHHHHHHHHhhhcCCCeEEEEEeC-CcchhHHHHh-----cCCeEEcCCCChhHHHHHHHhcCeEEecccC
Q 044542          296 -LVRD-KGHPLLYEAFSSITRDHPGVYLLVAGT-GPWGRRYAEL-----GQNVKVLGALEAHQLSEFYNALDVFVNPTLR  367 (465)
Q Consensus       296 -l~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~-g~~~~~~~~l-----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~  367 (465)
                       .... ++++.+++|++.+.+++|+++++++|. +...+.++++     +-++.+.    .+++..+|+.||+++.+|  
T Consensus       196 r~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~aDl~v~~s--  269 (380)
T PRK00025        196 RGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLL----DGQKREAMAAADAALAAS--  269 (380)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEE----cccHHHHHHhCCEEEECc--
Confidence             3333 457899999999988778999999976 4444444432     2234443    258999999999999976  


Q ss_pred             CCCCcHHHHHHHHcCCeEEec-----------------CCCCcceeeeeeCC--ceEEeCC-CHHHHHHHHHHHHhCChH
Q 044542          368 PQGLDLTLIEAMHCGRTVLTP-----------------NYPSIVRTVVVNEE--LGYTFSP-NVKSFVEALELVIRDGPK  427 (465)
Q Consensus       368 ~eg~~~~~~EAma~G~PvI~s-----------------~~gg~~~e~v~~~~--~G~l~~~-d~~~la~~i~~ll~~~~~  427 (465)
                          |.+++|||++|+|+|++                 +.++++ +++.++.  .+++.+. |++++++++.++++| ++
T Consensus       270 ----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~-~~  343 (380)
T PRK00025        270 ----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLP-NLLAGRELVPELLQEEATPEKLARALLPLLAD-GA  343 (380)
T ss_pred             ----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehH-HHhcCCCcchhhcCCCCCHHHHHHHHHHHhcC-HH
Confidence                56888999999999977                 444555 5555543  4466666 999999999999999 89


Q ss_pred             HHHHHHHHHHHHHHh
Q 044542          428 VLQRKGLACKEHALS  442 (465)
Q Consensus       428 ~~~~~~~~~~~~~~~  442 (465)
                      .+++|++++.+..+.
T Consensus       344 ~~~~~~~~~~~~~~~  358 (380)
T PRK00025        344 RRQALLEGFTELHQQ  358 (380)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999887555444

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.87  E-value=1.3e-20  Score=182.27  Aligned_cols=306  Identities=15%  Similarity=0.087  Sum_probs=195.6

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCC--c----ccCCcceEEEeecCCC--c----
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHN--D----VHQGNLHVHFAANDHG--S----  147 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~--~----~~~~~~~v~~~~~~~~--~----  147 (465)
                      ||++++..-|      + -..+.-+.++|++. |+++.++..........  .    .......+........  .    
T Consensus         1 ~i~~~~gtr~------~-~~~~~pl~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   73 (363)
T cd03786           1 KILVVTGTRP------E-YIKLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEILFIIKPDYDLLLGSDSQSLGAQT   73 (363)
T ss_pred             CEEEEEecCH------H-HHHHHHHHHHHhcCCCCCEEEEEeCCCCChhhhHHHHHhhCCCCCCEEEecCCCCCCHHHHH
Confidence            6888876432      1 22467788999887 89999877764433221  1    1111222222221111  0    


Q ss_pred             -------cccCCCCCCcEEEecCCch---h---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542          148 -------VNLNNDGAFDYVHTESVSL---P---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE  214 (465)
Q Consensus       148 -------~~~~~~~~~DiI~~~~~~~---~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (465)
                             ....++.+||+||+|+...   .   .....++| ++...+|....    +       ..         ....
T Consensus        74 ~~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iP-vv~~~~g~~s~----~-------~~---------~~~~  132 (363)
T cd03786          74 AGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIP-VAHVEAGLRSF----D-------RG---------MPDE  132 (363)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCC-EEEEecccccC----C-------CC---------CCch
Confidence                   0111566999999996431   1   11234678 77666653210    0       00         0000


Q ss_pred             hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEEe
Q 044542          215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGVA  293 (465)
Q Consensus       215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~  293 (465)
                      ....     ...+.+|.+++.|+..++.+.+ +|++++++.+++|++ |...+..........+++++++++. +++++.
T Consensus       133 ~~r~-----~~~~~ad~~~~~s~~~~~~l~~-~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~vlv~~  205 (363)
T cd03786         133 ENRH-----AIDKLSDLHFAPTEEARRNLLQ-EGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKK-YILVTL  205 (363)
T ss_pred             HHHH-----HHHHHhhhccCCCHHHHHHHHH-cCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCC-EEEEEe
Confidence            0111     2345679999999999999987 699999999999995 5433222222112234567776544 777788


Q ss_pred             ecccc---ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHH----h---cCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542          294 GRLVR---DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE----L---GQNVKVLGALEAHQLSEFYNALDVFVN  363 (465)
Q Consensus       294 Grl~~---~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~----l---~~~V~~~g~v~~~~~~~~~~~aDv~v~  363 (465)
                      |+...   .|+++.+++|++.+.+.  ++.+++.|.++..+.+++    +   .++|.|.|..+.+++..+|+.||++|.
T Consensus       206 ~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~  283 (363)
T cd03786         206 HRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLT  283 (363)
T ss_pred             CCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEE
Confidence            88764   79999999999998653  577777777665554443    3   368999998888999999999999999


Q ss_pred             cccCCCCCcHHHHHHHHcCCeEEecCCCC-cceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHH
Q 044542          364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPS-IVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRK  432 (465)
Q Consensus       364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg-~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~  432 (465)
                      +|.     | .+.|||++|+|+|+++..+ .+ +.+.++ .+..+..|+++++++|.+++++ ++.+..|
T Consensus       284 ~Sg-----g-i~~Ea~~~g~PvI~~~~~~~~~-~~~~~g-~~~~~~~~~~~i~~~i~~ll~~-~~~~~~~  344 (363)
T cd03786         284 DSG-----G-IQEEASFLGVPVLNLRDRTERP-ETVESG-TNVLVGTDPEAILAAIEKLLSD-EFAYSLM  344 (363)
T ss_pred             cCc-----c-HHhhhhhcCCCEEeeCCCCccc-hhhhee-eEEecCCCHHHHHHHHHHHhcC-chhhhcC
Confidence            872     3 5799999999999987533 33 444333 3333333799999999999998 6665555

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.86  E-value=6.3e-20  Score=178.07  Aligned_cols=196  Identities=15%  Similarity=0.127  Sum_probs=160.8

Q ss_pred             EEEecCCCCCCCccCCccc------CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEE
Q 044542          254 VHVILNGVDETKFVHDPEA------GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLV  323 (465)
Q Consensus       254 i~vi~ngvd~~~~~~~~~~------~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~i  323 (465)
                      +.++|.|||++.|......      ...+|++++   +. .+|+.++|+...||+...++|++++.+++|+    +.|++
T Consensus       250 v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~---~~-kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvq  325 (487)
T TIGR02398       250 LGAHPVGTDPERIRSALAAASIREMMERIRSELA---GV-KLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVT  325 (487)
T ss_pred             EEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC---Cc-eEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEE
Confidence            7899999999988653211      234677776   33 5666999999999999999999999998885    68998


Q ss_pred             EeCCc---------chhHHHHhc-------------CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHc
Q 044542          324 AGTGP---------WGRRYAELG-------------QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHC  381 (465)
Q Consensus       324 vG~g~---------~~~~~~~l~-------------~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~  381 (465)
                      +|.+.         .+++++++.             +-+.+.+.++.+++..+|+.|||++.+|.+ ||++++..||++|
T Consensus       326 i~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lr-DGmNLVa~Eyva~  404 (487)
T TIGR02398       326 ACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLR-DGLNLVAKEYVAA  404 (487)
T ss_pred             EeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccc-cccCcchhhHHhh
Confidence            88642         122333321             446888999999999999999999999997 9999999999999


Q ss_pred             CC----eEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 044542          382 GR----TVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERF  456 (465)
Q Consensus       382 G~----PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~  456 (465)
                      +.    |+|.|..+|.. +.+   ..+++++| |+++++++|.+++.++.+++++..++.++++.+ ++....++.+++-
T Consensus       405 ~~~~~GvLILSefaGaa-~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~-~d~~~W~~~fl~~  479 (487)
T TIGR02398       405 QGLLDGVLVLSEFAGAA-VEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNY-YDVQRWADEFLAA  479 (487)
T ss_pred             hcCCCCCEEEeccccch-hhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHH
Confidence            98    99999999988 333   35899999 999999999999999877777777888888877 7999999988876


Q ss_pred             HHH
Q 044542          457 FLR  459 (465)
Q Consensus       457 ~~~  459 (465)
                      ++.
T Consensus       480 l~~  482 (487)
T TIGR02398       480 VSP  482 (487)
T ss_pred             hhh
Confidence            543

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=5.2e-19  Score=169.57  Aligned_cols=221  Identities=30%  Similarity=0.498  Sum_probs=179.3

Q ss_pred             ccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCC-cEEEEEeeccccccCHHHHH
Q 044542          228 SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANV-SLVMGVAGRLVRDKGHPLLY  306 (465)
Q Consensus       228 ~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~-~~~l~~~Grl~~~Kg~~~ll  306 (465)
                      ..+.++..++.....+...+ . ..++.+++++++...+...         ..++..+. ...++++|++.+.||++.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i  218 (381)
T COG0438         150 LADRVIAVSPALKELLEALG-V-PNKIVVIPNGIDTEKFAPA---------RIGLLPEGGKFVVLYVGRLDPEKGLDLLI  218 (381)
T ss_pred             cccEEEECCHHHHHHHHHhC-C-CCCceEecCCcCHHHcCcc---------ccCCCcccCceEEEEeeccChhcCHHHHH
Confidence            47888888888766666542 2 3479999999998876542         01111222 26777999999999999999


Q ss_pred             HHHHHhhhcCCCeEEEEEeCCcch-h----HHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHH
Q 044542          307 EAFSSITRDHPGVYLLVAGTGPWG-R----RYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAM  379 (465)
Q Consensus       307 ~a~~~l~~~~~~~~l~ivG~g~~~-~----~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAm  379 (465)
                      +++..+.+..+++.+.++|.++.. +    ..+++.  ++|.+.|.++.+++..+++.+|++++||.. |++|++++|||
T Consensus       219 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~-e~~~~~~~Ea~  297 (381)
T COG0438         219 EAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLS-EGFGLVLLEAM  297 (381)
T ss_pred             HHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEecccc-ccchHHHHHHH
Confidence            999999887767899999988752 2    223333  789999999888888999999999999976 99999999999


Q ss_pred             HcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          380 HCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       380 a~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      ++|+|||+++.++.. +++.++..|+++.+ +++++++++..++++ ++.++.+.+.+++.+.+.|+|+.+++++.+++.
T Consensus       298 a~g~pvi~~~~~~~~-e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (381)
T COG0438         298 AAGTPVIASDVGGIP-EVVEDGETGLLVPPGDVEELADALEQLLED-PELREELGEAARERVEEEFSWERIAEQLLELYE  375 (381)
T ss_pred             hcCCcEEECCCCChH-HHhcCCCceEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            999999999999887 78777767887776 799999999999999 677888887677777678999999999999998


Q ss_pred             HhcC
Q 044542          459 RMKN  462 (465)
Q Consensus       459 ~~~~  462 (465)
                      ....
T Consensus       376 ~~~~  379 (381)
T COG0438         376 ELLA  379 (381)
T ss_pred             HHHh
Confidence            8754

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=1.6e-17  Score=147.15  Aligned_cols=334  Identities=15%  Similarity=0.211  Sum_probs=220.1

Q ss_pred             HHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCc--------ccc---------------CCCCC
Q 044542           99 ERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGS--------VNL---------------NNDGA  155 (465)
Q Consensus        99 ~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~---------------~~~~~  155 (465)
                      .-++..-|..|++.|++|.++..........-..  .+.++++......        ...               .....
T Consensus        26 SPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~--hprI~ih~m~~l~~~~~~p~~~~l~lKvf~Qfl~Ll~aL~~~~~  103 (444)
T KOG2941|consen   26 SPRMQYHALSLAKLGFQVDLIGYVESIPLEELLN--HPRIRIHGMPNLPFLQGGPRVLFLPLKVFWQFLSLLWALFVLRP  103 (444)
T ss_pred             ChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhc--CCceEEEeCCCCcccCCCchhhhhHHHHHHHHHHHHHHHHhccC
Confidence            3345667788899999999999887644333223  3333333222110        000               05678


Q ss_pred             CcEEEecCCc-hhH-----Hh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhc
Q 044542          156 FDYVHTESVS-LPH-----WR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFS  227 (465)
Q Consensus       156 ~DiI~~~~~~-~~~-----~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (465)
                      +|++.+.++. ++.     +.  -.+.+ ++..||+..+. ..-.+    ...  .. ..+ -.+.++.++     .+-+
T Consensus       104 ~~~ilvQNPP~iPtliv~~~~~~l~~~K-fiIDWHNy~Ys-l~l~~----~~g--~~-h~l-V~l~~~~E~-----~fgk  168 (444)
T KOG2941|consen  104 PDIILVQNPPSIPTLIVCVLYSILTGAK-FIIDWHNYGYS-LQLKL----KLG--FQ-HPL-VRLVRWLEK-----YFGK  168 (444)
T ss_pred             CcEEEEeCCCCCchHHHHHHHHHHhcce-EEEEehhhHHH-HHHHh----hcC--CC-Cch-HHHHHHHHH-----Hhhc
Confidence            9999998752 211     11  12334 99999997654 11111    000  00 001 133344443     4558


Q ss_pred             ccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-----CCCC----ccCCcc---------------cCcccccccC--
Q 044542          228 SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-----DETK----FVHDPE---------------AGVRFPEKLG--  281 (465)
Q Consensus       228 ~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-----d~~~----~~~~~~---------------~~~~~r~~~g--  281 (465)
                      .|+.-+|+++.+++.+.+.+|+.  +..|++.--     +.+.    |.+-..               +...+.++..  
T Consensus       169 ~a~~nLcVT~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~  246 (444)
T KOG2941|consen  169 LADYNLCVTKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASG  246 (444)
T ss_pred             ccccchhhHHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccc
Confidence            89999999999999999999974  344443211     1111    111000               0111122221  


Q ss_pred             ---CCCCCcEEEEEeeccccccCHHHHHHHHHHhhh-------cCCCeEEEEEeCCcchhHHHHhc-----CCeEE-cCC
Q 044542          282 ---VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITR-------DHPGVYLLVAGTGPWGRRYAELG-----QNVKV-LGA  345 (465)
Q Consensus       282 ---~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~-------~~~~~~l~ivG~g~~~~~~~~l~-----~~V~~-~g~  345 (465)
                         ...+.+.+++......+..++..+++|+....+       ..|.+-.+|.|.|+.++.+.+..     .+|.+ ..+
T Consensus       247 ~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpW  326 (444)
T KOG2941|consen  247 DVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPW  326 (444)
T ss_pred             hhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhcccceeeeecc
Confidence               122345677788888999999999999984422       23788899999999987665432     56655 678


Q ss_pred             CChhHHHHHHHhcCeEEe--cccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHh
Q 044542          346 LEAHQLSEFYNALDVFVN--PTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIR  423 (465)
Q Consensus       346 v~~~~~~~~~~~aDv~v~--ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~  423 (465)
                      +..|+.+.+++.||..|.  +|..+-..|+++++...||+||++-+...+. |+|.+++||++|. |.++|++++..+.+
T Consensus       327 L~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~-ELVkh~eNGlvF~-Ds~eLa~ql~~lf~  404 (444)
T KOG2941|consen  327 LEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLD-ELVKHGENGLVFE-DSEELAEQLQMLFK  404 (444)
T ss_pred             cccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHH-HHHhcCCCceEec-cHHHHHHHHHHHHh
Confidence            888999999999998765  5544567899999999999999999999987 9999999999999 99999999999999


Q ss_pred             C---ChHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542          424 D---GPKVLQRKGLACKEHALSMFTATKMASAYER  455 (465)
Q Consensus       424 ~---~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  455 (465)
                      +   +...+.++.+++++..+  ..|+..-++...
T Consensus       405 ~fp~~a~~l~~lkkn~~e~~e--~RW~~~W~~~~~  437 (444)
T KOG2941|consen  405 NFPDNADELNQLKKNLREEQE--LRWDESWERTAL  437 (444)
T ss_pred             cCCCCHHHHHHHHHhhHHHHh--hhHHHHHHHhhh
Confidence            2   26788888888888733  467665555443

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.80  E-value=2.5e-19  Score=147.31  Aligned_cols=131  Identities=30%  Similarity=0.485  Sum_probs=99.6

Q ss_pred             EEEEEeeccccccCHHHHHH-HHHHhhhcCCCeEEEEEeCCcchhHHHHh-cCCeEEcCCCChhHHHHHHHhcCeEEecc
Q 044542          288 LVMGVAGRLVRDKGHPLLYE-AFSSITRDHPGVYLLVAGTGPWGRRYAEL-GQNVKVLGALEAHQLSEFYNALDVFVNPT  365 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~ll~-a~~~l~~~~~~~~l~ivG~g~~~~~~~~l-~~~V~~~g~v~~~~~~~~~~~aDv~v~ps  365 (465)
                      +.++++|++.+.|+++.+++ ++.++.+++|+++|+|+|.++.  +++++ .++|+++|++  +++.++++.||+++.|+
T Consensus         3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--~l~~~~~~~v~~~g~~--~e~~~~l~~~dv~l~p~   78 (135)
T PF13692_consen    3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--ELKRLRRPNVRFHGFV--EELPEILAAADVGLIPS   78 (135)
T ss_dssp             EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---HHCCHHHCTEEEE-S---HHHHHHHHC-SEEEE-B
T ss_pred             ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--HHHHhcCCCEEEcCCH--HHHHHHHHhCCEEEEEe
Confidence            67889999999999999999 9999999999999999999765  35555 5899999999  68999999999999998


Q ss_pred             cCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhC
Q 044542          366 LRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRD  424 (465)
Q Consensus       366 ~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~  424 (465)
                      ...+++|++++|||++|+|||+++. +.. +++...+.|.++..|+++++++|.++++|
T Consensus        79 ~~~~~~~~k~~e~~~~G~pvi~~~~-~~~-~~~~~~~~~~~~~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   79 RFNEGFPNKLLEAMAAGKPVIASDN-GAE-GIVEEDGCGVLVANDPEELAEAIERLLND  135 (135)
T ss_dssp             SS-SCC-HHHHHHHCTT--EEEEHH-HCH-CHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred             eCCCcCcHHHHHHHHhCCCEEECCc-chh-hheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence            6558999999999999999999998 454 55555667777744999999999999875

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.79  E-value=1.2e-17  Score=172.45  Aligned_cols=229  Identities=17%  Similarity=0.199  Sum_probs=171.2

Q ss_pred             HhhcccCEEEEeChhHHHHHHHH----hCCC-----------CCCEEEecCCCCCCCccCCccc------CcccccccCC
Q 044542          224 RFFSSYNQHICISNSAAEVLVKI----YQLP-----------QRNVHVILNGVDETKFVHDPEA------GVRFPEKLGV  282 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~----~~~~-----------~~ki~vi~ngvd~~~~~~~~~~------~~~~r~~~g~  282 (465)
                      +-+-.||.|=+.+......+.+.    .|..           ..++.+.|-|||.+.|......      ...++++++ 
T Consensus       283 ~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~-  361 (934)
T PLN03064        283 RSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA-  361 (934)
T ss_pred             HHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC-
Confidence            34557899988887777766542    2321           1236678999999888653221      124566654 


Q ss_pred             CCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeE--EEEE-------eCCcchhH----HHHhc------------
Q 044542          283 PANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVY--LLVA-------GTGPWGRR----YAELG------------  337 (465)
Q Consensus       283 ~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~--l~iv-------G~g~~~~~----~~~l~------------  337 (465)
                        +. .+|+.++|+...||+...++|++++.+++|+++  ++++       |+++..+.    +.++.            
T Consensus       362 --g~-kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w  438 (934)
T PLN03064        362 --GR-KVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTA  438 (934)
T ss_pred             --Cc-eEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCc
Confidence              33 566699999999999999999999988888754  4554       33333222    22211            


Q ss_pred             CCeEE-cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC----eEEecCCCCcceeeeeeCCceEEeCC-CH
Q 044542          338 QNVKV-LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR----TVLTPNYPSIVRTVVVNEELGYTFSP-NV  411 (465)
Q Consensus       338 ~~V~~-~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~----PvI~s~~gg~~~e~v~~~~~G~l~~~-d~  411 (465)
                      ..|++ ...++.+++..+|+.|||+++||.+ ||++++..|||+|+.    ++|.|...|.. +.+  +..+++++| |+
T Consensus       439 ~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslr-DGmNLva~Eyva~~~~~~GvLILSEfaGaa-~~L--~~~AllVNP~D~  514 (934)
T PLN03064        439 VPIHHLDRSLDFHALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDSKKGVLILSEFAGAA-QSL--GAGAILVNPWNI  514 (934)
T ss_pred             ceEEEeccCCCHHHHHHHHHhCCEEEeCccc-cccCchHHHHHHhhcCCCCCeEEeCCCchH-HHh--CCceEEECCCCH
Confidence            12443 4458999999999999999999997 999999999999954    45558888887 444  446899999 99


Q ss_pred             HHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          412 KSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       412 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      ++++++|.+++..+++++++..++.++++.. +++..+++.+++-+++..
T Consensus       515 ~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~-~d~~~Wa~~fl~~L~~~~  563 (934)
T PLN03064        515 TEVAASIAQALNMPEEEREKRHRHNFMHVTT-HTAQEWAETFVSELNDTV  563 (934)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHhhccc-CCHHHHHHHHHHHHHHHH
Confidence            9999999999997688899999999999987 799999999888776653

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.76  E-value=6.8e-17  Score=159.91  Aligned_cols=210  Identities=11%  Similarity=0.089  Sum_probs=167.1

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCC--CCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEee--ccccc
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLP--QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG--RLVRD  299 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~--~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G--rl~~~  299 (465)
                      ..+.++|.+|+.++...+.+.++++-.  ..++..||.+.- ... +            |.....+..+++++  |+ +.
T Consensus       268 ~~~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~-~------------~~s~r~~~~~I~v~idrL-~e  332 (519)
T TIGR03713       268 ESLSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLR-L------------GQSQQLYETEIGFWIDGL-SD  332 (519)
T ss_pred             hChhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEe-c------------ChhhcccceEEEEEcCCC-Ch
Confidence            345688999999988888887766411  134566775433 111 1            11112223455778  99 99


Q ss_pred             cCHHHHHHHHHHhhhcCCCeEEEEEeCCcch---hHH----HHh--c-----------------------------CCeE
Q 044542          300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWG---RRY----AEL--G-----------------------------QNVK  341 (465)
Q Consensus       300 Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~---~~~----~~l--~-----------------------------~~V~  341 (465)
                      |.++.+++|+.++.+++|+++|.+.|.+.+.   +.+    +++  .                             ..|.
T Consensus       333 k~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  412 (519)
T TIGR03713       333 EELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIA  412 (519)
T ss_pred             HHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEE
Confidence            9999999999999999999999999987543   222    222  2                             5899


Q ss_pred             EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHH
Q 044542          342 VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELV  421 (465)
Q Consensus       342 ~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~l  421 (465)
                      |.|+.+..++.+.|..+.++|.+|.. ||++ +.+||+++|+|+|  +.|. . ++|.++.+|+++. |..+|++++..+
T Consensus       413 f~gy~~e~dl~~~~~~arl~id~s~~-eg~~-~~ieAiS~GiPqI--nyg~-~-~~V~d~~NG~li~-d~~~l~~al~~~  485 (519)
T TIGR03713       413 FTTLTNEEDLISALDKLRLIIDLSKE-PDLY-TQISGISAGIPQI--NKVE-T-DYVEHNKNGYIID-DISELLKALDYY  485 (519)
T ss_pred             EEecCCHHHHHHHHhhheEEEECCCC-CChH-HHHHHHHcCCCee--ecCC-c-eeeEcCCCcEEeC-CHHHHHHHHHHH
Confidence            99999877999999999999999974 9999 9999999999999  4443 4 8999999999996 999999999999


Q ss_pred             HhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          422 IRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       422 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      +.+ ++.++++...+.+.+.+ ||.+++.++|.+++
T Consensus       486 L~~-~~~wn~~~~~sy~~~~~-yS~~~i~~kW~~~~  519 (519)
T TIGR03713       486 LDN-LKNWNYSLAYSIKLIDD-YSSENIIERLNELI  519 (519)
T ss_pred             HhC-HHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhC
Confidence            999 89999999999999966 99999999998753

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.70  E-value=3.5e-15  Score=149.53  Aligned_cols=231  Identities=17%  Similarity=0.195  Sum_probs=169.5

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhC----C-C--CCCEEEecCCCCCCCccCCccc------------------------
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQ----L-P--QRNVHVILNGVDETKFVHDPEA------------------------  272 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~----~-~--~~ki~vi~ngvd~~~~~~~~~~------------------------  272 (465)
                      ..+..++.+.+||+...+..++.++    . +  ..++.-|-||||...+.+....                        
T Consensus       258 lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~  337 (601)
T TIGR02094       258 LALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAI  337 (601)
T ss_pred             HHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhc
Confidence            4567889999999988874444232    1 1  3358889999999877653210                        


Q ss_pred             ---------------Cccccc---------------------ccC--CCCCCcEEEEEeeccccccCHHHHHHHHHHhhh
Q 044542          273 ---------------GVRFPE---------------------KLG--VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITR  314 (465)
Q Consensus       273 ---------------~~~~r~---------------------~~g--~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~  314 (465)
                                     +..+.+                     ..|  +.++ .+++++++|+..+||++++++++.++.+
T Consensus       338 ~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd-~~~ig~v~Rl~~yKr~dLil~~i~~l~~  416 (601)
T TIGR02094       338 DDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPD-VLTIGFARRFATYKRADLIFRDLERLAR  416 (601)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCC-CcEEEEEEcchhhhhHHHHHHHHHHHHH
Confidence                           001111                     112  2233 3788899999999999999999888864


Q ss_pred             --cC--CCeEEEEEeCCcc--------hhHHHHhc------CCeEEcCCCChhHHHHHHHhcCeEEe-cccCCCCCcHHH
Q 044542          315 --DH--PGVYLLVAGTGPW--------GRRYAELG------QNVKVLGALEAHQLSEFYNALDVFVN-PTLRPQGLDLTL  375 (465)
Q Consensus       315 --~~--~~~~l~ivG~g~~--------~~~~~~l~------~~V~~~g~v~~~~~~~~~~~aDv~v~-ps~~~eg~~~~~  375 (465)
                        ..  .+++++++|++..        .+.+.+++      ++|.|+...+.+-...+++.||++++ ||.-.|.+|++-
T Consensus       417 i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsq  496 (601)
T TIGR02094       417 ILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSG  496 (601)
T ss_pred             HhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHH
Confidence              21  3699999998752        22333332      68999888876777778899999999 987239999999


Q ss_pred             HHHHHcCCeEEecCCCCcceeeeeeCCceEEeC------------C-CHHHHHHHHHHHHh----CC-----hHHHHHHH
Q 044542          376 IEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFS------------P-NVKSFVEALELVIR----DG-----PKVLQRKG  433 (465)
Q Consensus       376 ~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~------------~-d~~~la~~i~~ll~----~~-----~~~~~~~~  433 (465)
                      +-||..|.+.+++--|... |.. ++.+|+.+.            . |.++|-++|++.+.    +.     |..+.++.
T Consensus       497 Mka~~nGgL~~sv~DG~~~-E~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~  574 (601)
T TIGR02094       497 MKAAMNGVLNLSILDGWWG-EGY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMM  574 (601)
T ss_pred             HHHHHcCCceeecccCccc-ccC-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHH
Confidence            9999999999999877776 444 678999998            4 89999999977652    21     33467777


Q ss_pred             HHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          434 LACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       434 ~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      +++.+.....|||++++++|.++|
T Consensus       575 k~am~~~~~~fsw~r~a~~Y~~~y  598 (601)
T TIGR02094       575 KESIATIAPRFSTNRMVREYVDKF  598 (601)
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHh
Confidence            777666555799999999999987

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.66  E-value=1e-14  Score=140.93  Aligned_cols=306  Identities=12%  Similarity=0.063  Sum_probs=181.0

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccC--CcceEEEeec---CCC---------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQ--GNLHVHFAAN---DHG---------  146 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--~~~~v~~~~~---~~~---------  146 (465)
                      ||++.+.      ..||.-.-. .++++|++.|++++++..............  ....+.....   ...         
T Consensus         7 ki~i~aG------gtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~   79 (385)
T TIGR00215         7 TIALVAG------EASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRK   79 (385)
T ss_pred             eEEEEeC------CccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHH
Confidence            7887764      456654444 999999999999999886643211110000  0000000000   000         


Q ss_pred             -ccccCCCCCCcEEEecCC-chhH-----HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHH
Q 044542          147 -SVNLNNDGAFDYVHTESV-SLPH-----WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRL  219 (465)
Q Consensus       147 -~~~~~~~~~~DiI~~~~~-~~~~-----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (465)
                       .....++.+||+|++.++ +.+.     ....++| ++..+.  +-.+                  .   +.... .+ 
T Consensus        80 ~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip-~v~~i~--P~~w------------------a---w~~~~-~r-  133 (385)
T TIGR00215        80 EVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIK-IIYYIS--PQVW------------------A---WRKWR-AK-  133 (385)
T ss_pred             HHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCC-EEEEeC--CcHh------------------h---cCcch-HH-
Confidence             001117889999999875 2221     2233567 554331  1000                  0   00011 11 


Q ss_pred             HHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEee-cccc
Q 044542          220 VDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG-RLVR  298 (465)
Q Consensus       220 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G-rl~~  298 (465)
                          .+.+.+|.+++.++...+.+.+ +|   .++.++.|++...... ....+...|+++|++++.+.++++.| |..+
T Consensus       134 ----~l~~~~d~v~~~~~~e~~~~~~-~g---~~~~~vGnPv~~~~~~-~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~ae  204 (385)
T TIGR00215       134 ----KIEKATDFLLAILPFEKAFYQK-KN---VPCRFVGHPLLDAIPL-YKPDRKSAREKLGIDHNGETLALLPGSRGSE  204 (385)
T ss_pred             ----HHHHHHhHhhccCCCcHHHHHh-cC---CCEEEECCchhhhccc-cCCCHHHHHHHcCCCCCCCEEEEECCCCHHH
Confidence                3346789999999999888875 44   3567788887433221 11123456778898877755554555 5555


Q ss_pred             -ccCHHHHHHHHHHhhhcCCCeEEEEEe-CCcchhHHHH----hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCC
Q 044542          299 -DKGHPLLYEAFSSITRDHPGVYLLVAG-TGPWGRRYAE----LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG  370 (465)
Q Consensus       299 -~Kg~~~ll~a~~~l~~~~~~~~l~ivG-~g~~~~~~~~----l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg  370 (465)
                       .|++..+++|++.+.+++|++++++.+ .+...+.+++    ++  ..|.+.+.    +...+|++||++|.+|     
T Consensus       205 i~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~l~aADl~V~~S-----  275 (385)
T TIGR00215       205 VEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG----DARKAMFAADAALLAS-----  275 (385)
T ss_pred             HHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc----hHHHHHHhCCEEeecC-----
Confidence             689999999999998888898887654 4333333332    22  35555433    5668999999999987     


Q ss_pred             CcHHHHHHHHcCCeEEec-CCCCcce---------------eeeeeCCc-eEEe-CC-CHHHHHHHHHHHHhCCh----H
Q 044542          371 LDLTLIEAMHCGRTVLTP-NYPSIVR---------------TVVVNEEL-GYTF-SP-NVKSFVEALELVIRDGP----K  427 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s-~~gg~~~---------------e~v~~~~~-G~l~-~~-d~~~la~~i~~ll~~~~----~  427 (465)
                       |.+.+|+|++|+|+|.. +.+...-               .++.+.+. -.+. .. +++.+++.+.++++| +    +
T Consensus       276 -Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~-~~~~~~  353 (385)
T TIGR00215       276 -GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLEN-GLKAYK  353 (385)
T ss_pred             -CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcC-CcccHH
Confidence             55777999999998876 2221110               12222221 1122 22 799999999999998 7    7


Q ss_pred             HHHHHHHHHHHH
Q 044542          428 VLQRKGLACKEH  439 (465)
Q Consensus       428 ~~~~~~~~~~~~  439 (465)
                      .++++.+...+.
T Consensus       354 ~~~~~~~~~~~~  365 (385)
T TIGR00215       354 EMHRERQFFEEL  365 (385)
T ss_pred             HHHHHHHHHHHH
Confidence            777776654444

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.63  E-value=7.8e-15  Score=126.28  Aligned_cols=159  Identities=25%  Similarity=0.371  Sum_probs=89.7

Q ss_pred             EEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC--Cccc----------
Q 044542           82 LAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH--GSVN----------  149 (465)
Q Consensus        82 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~----------  149 (465)
                      |+++...+   +..||+++++.+++++|+++||+|++++....+....+      .........  ....          
T Consensus         1 ili~~~~~---~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~   71 (177)
T PF13439_consen    1 ILITNIFL---PNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE------LVKIFVKIPYPIRKRFLRSFFFMRR   71 (177)
T ss_dssp             -EEECC-T---TSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST------EEEE---TT-SSTSS--HHHHHHHH
T ss_pred             CEEEEecC---CCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh------ccceeeeeecccccccchhHHHHHH
Confidence            45555555   47899999999999999999999999998876554433      111111000  0000          


Q ss_pred             ---cCCCCCCcEEEecCCchh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH
Q 044542          150 ---LNNDGAFDYVHTESVSLP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI  223 (465)
Q Consensus       150 ---~~~~~~~DiI~~~~~~~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (465)
                         ..++.+||+||+|.....   .......| .+++.|+.+..       ....    .........+.....+     
T Consensus        72 ~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~-~v~~~H~~~~~-------~~~~----~~~~~~~~~~~~~~~~-----  134 (177)
T PF13439_consen   72 LRRLIKKEKPDIVHIHGPPAFWIALLACRKVP-IVYTIHGPYFE-------RRFL----KSKLSPYSYLNFRIER-----  134 (177)
T ss_dssp             HHHHHHHHT-SEEECCTTHCCCHHHHHHHCSC-EEEEE-HHH---------HHTT----TTSCCCHHHHHHCTTH-----
T ss_pred             HHHHHHHcCCCeEEecccchhHHHHHhccCCC-EEEEeCCCccc-------cccc----ccccchhhhhhhhhhh-----
Confidence               005679999999985321   11112667 99999987632       0000    0000111111111111     


Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCcc
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV  267 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~  267 (465)
                      ..++.+|.++++|+..++.+.+ +|++++++.|||||+|.+.|.
T Consensus       135 ~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~  177 (177)
T PF13439_consen  135 KLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR  177 (177)
T ss_dssp             HHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred             hHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence            4468999999999999999999 999999999999999998763

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.58  E-value=9.9e-13  Score=123.87  Aligned_cols=306  Identities=17%  Similarity=0.136  Sum_probs=181.2

Q ss_pred             CCChHHHHHHHHHHHHHhCCcE-EEEEeCCCCCCCCCcccCCcceEEEeecCC----CccccC-----------------
Q 044542           94 APGGMERHASTLYHALAARGHE-IHVFTAPSDRKPHNDVHQGNLHVHFAANDH----GSVNLN-----------------  151 (465)
Q Consensus        94 ~~gG~~~~~~~l~~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~-----------------  151 (465)
                      ..||.-.....++++|.++|++ |.++....... ..........++......    ..+...                 
T Consensus         9 GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e-~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~a~~il   87 (357)
T COG0707           9 GTGGHVFPALALAEELAKRGWEQVIVLGTGDGLE-AFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFKLLKGVLQARKIL   87 (357)
T ss_pred             CCccchhHHHHHHHHHHhhCccEEEEecccccce-eeeccccCceEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHH
Confidence            5688888899999999999995 55553332211 111222233344333221    111100                 


Q ss_pred             CCCCCcEEEecCC--chhH---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhh
Q 044542          152 NDGAFDYVHTESV--SLPH---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF  226 (465)
Q Consensus       152 ~~~~~DiI~~~~~--~~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (465)
                      ++.+||+|+..+.  ..+.   ....++| ++....+....                       ...+++         .
T Consensus        88 ~~~kPd~vig~Ggyvs~P~~~Aa~~~~iP-v~ihEqn~~~G-----------------------~ank~~---------~  134 (357)
T COG0707          88 KKLKPDVVIGTGGYVSGPVGIAAKLLGIP-VIIHEQNAVPG-----------------------LANKIL---------S  134 (357)
T ss_pred             HHcCCCEEEecCCccccHHHHHHHhCCCC-EEEEecCCCcc-----------------------hhHHHh---------H
Confidence            7899999999653  2222   2334566 55554442110                       111111         2


Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY  306 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll  306 (465)
                      +.++.|.+.-+.    . . -+.+.+++.+..|++..+... .+..  ..+.... . +.+.++++-|.....+=-+.+.
T Consensus       135 ~~a~~V~~~f~~----~-~-~~~~~~~~~~tG~Pvr~~~~~-~~~~--~~~~~~~-~-~~~~ilV~GGS~Ga~~ln~~v~  203 (357)
T COG0707         135 KFAKKVASAFPK----L-E-AGVKPENVVVTGIPVRPEFEE-LPAA--EVRKDGR-L-DKKTILVTGGSQGAKALNDLVP  203 (357)
T ss_pred             Hhhceeeecccc----c-c-ccCCCCceEEecCcccHHhhc-cchh--hhhhhcc-C-CCcEEEEECCcchhHHHHHHHH
Confidence            333444332222    1 1 245567899999999887665 2221  1111111 1 3434554555555444333444


Q ss_pred             HHHHHhhhcCCCeE-EEEEeCCcchhHHHHhc-CC-eEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC
Q 044542          307 EAFSSITRDHPGVY-LLVAGTGPWGRRYAELG-QN-VKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR  383 (465)
Q Consensus       307 ~a~~~l~~~~~~~~-l~ivG~g~~~~~~~~l~-~~-V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~  383 (465)
                      ++...+.+   +++ ++.+|.+...+..+.+. .+ +.+.++.  +++..+|++||++|.   +  +-++++.|..++|+
T Consensus       204 ~~~~~l~~---~~~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~--~dm~~~~~~ADLvIs---R--aGa~Ti~E~~a~g~  273 (357)
T COG0707         204 EALAKLAN---RIQVIHQTGKNDLEELKSAYNELGVVRVLPFI--DDMAALLAAADLVIS---R--AGALTIAELLALGV  273 (357)
T ss_pred             HHHHHhhh---CeEEEEEcCcchHHHHHHHHhhcCcEEEeeHH--hhHHHHHHhccEEEe---C--CcccHHHHHHHhCC
Confidence            45555543   355 45556554333333333 22 8899998  789999999999996   3  22579999999999


Q ss_pred             eEEecCCCCcce-------eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542          384 TVLTPNYPSIVR-------TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY  453 (465)
Q Consensus       384 PvI~s~~gg~~~-------e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  453 (465)
                      |+|--..+...+       ..+++.+.|.+++.   +++.+.+.|.+++++ ++.+++|.+++++....+ ..+.+++..
T Consensus       274 P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~-~~~l~~m~~~a~~~~~p~-aa~~i~~~~  351 (357)
T COG0707         274 PAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSN-PEKLKAMAENAKKLGKPD-AAERIADLL  351 (357)
T ss_pred             CEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCC-HHHHHHHHH
Confidence            999877665421       23455667888875   589999999999999 899999999998876663 555555555


Q ss_pred             HHH
Q 044542          454 ERF  456 (465)
Q Consensus       454 ~~~  456 (465)
                      +.+
T Consensus       352 ~~~  354 (357)
T COG0707         352 LAL  354 (357)
T ss_pred             HHH
Confidence            443

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.57  E-value=3.6e-13  Score=130.29  Aligned_cols=240  Identities=16%  Similarity=0.127  Sum_probs=145.9

Q ss_pred             HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCccc-------Cc--------ccccccC
Q 044542          217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA-------GV--------RFPEKLG  281 (465)
Q Consensus       217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~-------~~--------~~r~~~g  281 (465)
                      .+..-|+...+.||.+.+||+-++......++-.++  .|+|||++...|......       +.        .+...+.
T Consensus       210 ~k~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pD--vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~d  287 (633)
T PF05693_consen  210 HKHSIERAAAHYADVFTTVSEITAKEAEHLLKRKPD--VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYD  287 (633)
T ss_dssp             HHHHHHHHHHHHSSEEEESSHHHHHHHHHHHSS--S--EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---
T ss_pred             HHHHHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCC--EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            344456677889999999999999998887764333  788999998877654321       10        1111233


Q ss_pred             CCCCCcEEEEEeecccc-ccCHHHHHHHHHHhhhc----CCC---eEEEEEeCCc----------------ch-------
Q 044542          282 VPANVSLVMGVAGRLVR-DKGHPLLYEAFSSITRD----HPG---VYLLVAGTGP----------------WG-------  330 (465)
Q Consensus       282 ~~~~~~~~l~~~Grl~~-~Kg~~~ll~a~~~l~~~----~~~---~~l~ivG~g~----------------~~-------  330 (465)
                      +..++.+.+..+||.+- .||+|.+|+|+.+|...    ..+   +-|+|+-...                .+       
T Consensus       288 fd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~  367 (633)
T PF05693_consen  288 FDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQ  367 (633)
T ss_dssp             S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHH
Confidence            44455688888999975 89999999999988542    222   2344543210                00       


Q ss_pred             h----------------------------HH--------------------------------HHhc------CCe--EE
Q 044542          331 R----------------------------RY--------------------------------AELG------QNV--KV  342 (465)
Q Consensus       331 ~----------------------------~~--------------------------------~~l~------~~V--~~  342 (465)
                      +                            .+                                ++++      ++|  +|
T Consensus       368 ~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF  447 (633)
T PF05693_consen  368 EKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIF  447 (633)
T ss_dssp             HHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEE
Confidence            0                            00                                0111      444  44


Q ss_pred             cCC-CC------hhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeee-----eCCceEEeC-C
Q 044542          343 LGA-LE------AHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVV-----NEELGYTFS-P  409 (465)
Q Consensus       343 ~g~-v~------~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~-----~~~~G~l~~-~  409 (465)
                      ++. ++      .-+..+++..+|+.|+||.+ |++|.+.+|+.++|+|.|+|+..|.. ..+.     ....|+.+- .
T Consensus       448 ~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYY-EPWGYTPlE~~a~gVPsITTnLsGFG-~~~~~~~~~~~~~GV~VvdR  525 (633)
T PF05693_consen  448 HPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYY-EPWGYTPLECTAFGVPSITTNLSGFG-CWMQEHIEDPEEYGVYVVDR  525 (633)
T ss_dssp             --S---TTSSSS-S-HHHHHHHSSEEEE--SS-BSS-HHHHHHHHTT--EEEETTBHHH-HHHHTTS-HHGGGTEEEE-S
T ss_pred             eeccccCCCCCCCCCHHHHhccCceeeecccc-ccccCChHHHhhcCCceeeccchhHH-HHHHHhhccCcCCcEEEEeC
Confidence            432 21      24688999999999999987 99999999999999999999988764 2222     234565553 1


Q ss_pred             -------CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          410 -------NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       410 -------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                             .++++++.|.++...++..+..++.++.+.... .+|+++...|.+.|.-.+
T Consensus       526 ~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~-~dW~~~~~yY~~Ay~~AL  583 (633)
T PF05693_consen  526 RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDL-ADWKNFGKYYEKAYDLAL  583 (633)
T ss_dssp             SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGG-GBHHHHCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHH
Confidence                   256777777788777666777777777665544 899999999999997654

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.55  E-value=3.6e-12  Score=121.58  Aligned_cols=281  Identities=11%  Similarity=0.088  Sum_probs=162.7

Q ss_pred             CCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccC-CcceEEEeecC-CC--cc-----------------ccCC
Q 044542           94 APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQ-GNLHVHFAAND-HG--SV-----------------NLNN  152 (465)
Q Consensus        94 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~~v~~~~~~-~~--~~-----------------~~~~  152 (465)
                      ..||.-.-...++++|.+.||+|.+++......... ... +.....+.... .+  .+                 ...+
T Consensus        10 GTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l-~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~   88 (352)
T PRK12446         10 GSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTI-IEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGVMDAYVRIR   88 (352)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccccc-CcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            678888888999999999999999998665433221 111 22222221111 11  11                 0018


Q ss_pred             CCCCcEEEecCCc-----hhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhc
Q 044542          153 DGAFDYVHTESVS-----LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFS  227 (465)
Q Consensus       153 ~~~~DiI~~~~~~-----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (465)
                      +.+||+||.+...     .......++| +++.-.+.                           ......+     .+.+
T Consensus        89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p-~~i~e~n~---------------------------~~g~~nr-----~~~~  135 (352)
T PRK12446         89 KLKPDVIFSKGGFVSVPVVIGGWLNRVP-VLLHESDM---------------------------TPGLANK-----IALR  135 (352)
T ss_pred             hcCCCEEEecCchhhHHHHHHHHHcCCC-EEEECCCC---------------------------CccHHHH-----HHHH
Confidence            8999999998742     2222334556 43322221                           0011111     2234


Q ss_pred             ccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCH-HHHH
Q 044542          228 SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGH-PLLY  306 (465)
Q Consensus       228 ~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~-~~ll  306 (465)
                      .++.+++.-+...    +  +++.+++.++.|++..+.....   +...++.++++++.+.++++.|.... +.+ +.+.
T Consensus       136 ~a~~v~~~f~~~~----~--~~~~~k~~~tG~Pvr~~~~~~~---~~~~~~~~~l~~~~~~iLv~GGS~Ga-~~in~~~~  205 (352)
T PRK12446        136 FASKIFVTFEEAA----K--HLPKEKVIYTGSPVREEVLKGN---REKGLAFLGFSRKKPVITIMGGSLGA-KKINETVR  205 (352)
T ss_pred             hhCEEEEEccchh----h--hCCCCCeEEECCcCCccccccc---chHHHHhcCCCCCCcEEEEECCccch-HHHHHHHH
Confidence            5566654332222    2  2345788999999987653221   23455677877777666655565543 334 3333


Q ss_pred             HHHHHhhhcCCCeEE-EEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeE
Q 044542          307 EAFSSITRDHPGVYL-LVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTV  385 (465)
Q Consensus       307 ~a~~~l~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~Pv  385 (465)
                      +++..+.+   ++++ +++|....++..... +++...+++ .+++.++|+.||++|.   +  +-++++.|++++|+|.
T Consensus       206 ~~l~~l~~---~~~vv~~~G~~~~~~~~~~~-~~~~~~~f~-~~~m~~~~~~adlvIs---r--~G~~t~~E~~~~g~P~  275 (352)
T PRK12446        206 EALPELLL---KYQIVHLCGKGNLDDSLQNK-EGYRQFEYV-HGELPDILAITDFVIS---R--AGSNAIFEFLTLQKPM  275 (352)
T ss_pred             HHHHhhcc---CcEEEEEeCCchHHHHHhhc-CCcEEecch-hhhHHHHHHhCCEEEE---C--CChhHHHHHHHcCCCE
Confidence            44555432   3554 445654333323222 345556775 2579999999999996   2  3357999999999999


Q ss_pred             EecCCCCcc---e-----eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHH
Q 044542          386 LTPNYPSIV---R-----TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVL  429 (465)
Q Consensus       386 I~s~~gg~~---~-----e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~  429 (465)
                      |........   +     +.+.+.+.+..+..   +++.+.+++.+++.| ++.+
T Consensus       276 I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~-~~~~  329 (352)
T PRK12446        276 LLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHN-NEKY  329 (352)
T ss_pred             EEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcC-HHHH
Confidence            988653211   0     13344555666543   789999999999988 6554

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.54  E-value=2.6e-12  Score=123.90  Aligned_cols=274  Identities=11%  Similarity=0.109  Sum_probs=188.0

Q ss_pred             CcEEEecCCc---hhHHhhhcCC--cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccC
Q 044542          156 FDYVHTESVS---LPHWRAKMVP--NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYN  230 (465)
Q Consensus       156 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (465)
                      -|+|.+|++.   ++..+....|  ++-+.+|-.++.   .+++..+.            +-...+       +-+-.+|
T Consensus       124 ~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs---~eifr~LP------------~r~eil-------~glL~aD  181 (474)
T PRK10117        124 DDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPT---PEIFNALP------------PHDELL-------EQLCDYD  181 (474)
T ss_pred             CCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCC---hHHHhhCC------------ChHHHH-------HHHHhCc
Confidence            3899998874   3444444333  266777754332   22332221            111111       3345678


Q ss_pred             EEEEeChhHHHHHHHH----hCCC------------CCCEEEecCCCCCCCccCCcc-----cCcccccccCCCCCCcEE
Q 044542          231 QHICISNSAAEVLVKI----YQLP------------QRNVHVILNGVDETKFVHDPE-----AGVRFPEKLGVPANVSLV  289 (465)
Q Consensus       231 ~ii~~S~~~~~~~~~~----~~~~------------~~ki~vi~ngvd~~~~~~~~~-----~~~~~r~~~g~~~~~~~~  289 (465)
                      .|=+.+...++.+.+.    .|+.            .-++.+.|-|||.+.|.....     ....++++++   +. .+
T Consensus       182 lIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~---~~-~l  257 (474)
T PRK10117        182 LLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELK---NV-QN  257 (474)
T ss_pred             cceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcC---CC-eE
Confidence            8888777776655542    1221            124677888999887754221     1123444443   33 45


Q ss_pred             EEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEEEeCCc---------chhHHHHhc------------CCeEE-c
Q 044542          290 MGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLVAGTGP---------WGRRYAELG------------QNVKV-L  343 (465)
Q Consensus       290 l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g~---------~~~~~~~l~------------~~V~~-~  343 (465)
                      |+-+.|++.-||+..=++|++++.+++|+    +.|+-+....         .+.+++++.            ..|.+ .
T Consensus       258 ilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~  337 (474)
T PRK10117        258 IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLN  337 (474)
T ss_pred             EEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEec
Confidence            55789999999999999999999998875    4455554321         111222221            22444 4


Q ss_pred             CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC-----eEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHH
Q 044542          344 GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR-----TVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEA  417 (465)
Q Consensus       344 g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~-----PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~  417 (465)
                      ..++.+++..+|+.|||++.++.+ +|+.++..|+.+|..     ++|.|...|..+ .+.   ..++++| |.++++++
T Consensus       338 ~~~~~~~l~alyr~ADv~lVTplR-DGMNLVAkEyva~q~~~~~GvLILSefAGaA~-~L~---~AllVNP~d~~~~A~A  412 (474)
T PRK10117        338 QHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN-ELT---SALIVNPYDRDEVAAA  412 (474)
T ss_pred             CCCCHHHHHHHHHhccEEEecccc-cccccccchheeeecCCCCccEEEecccchHH-HhC---CCeEECCCCHHHHHHH
Confidence            567999999999999999999987 999999999999976     378899888874 332   4899999 99999999


Q ss_pred             HHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          418 LELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       418 i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      |.+.+..+++++++..+..++.+.. ++....++.+++-+..+.
T Consensus       413 i~~AL~Mp~~Er~~R~~~l~~~v~~-~dv~~W~~~fL~~L~~~~  455 (474)
T PRK10117        413 LDRALTMPLAERISRHAEMLDVIVK-NDINHWQECFISDLKQIV  455 (474)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHhhh-CCHHHHHHHHHHHHHHhh
Confidence            9999999888888888888888877 799999999998887654

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.51  E-value=1e-12  Score=127.24  Aligned_cols=185  Identities=13%  Similarity=0.178  Sum_probs=137.1

Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLY  306 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll  306 (465)
                      .+.|.||+.++...+.+.++++ +..++.++|-|+-   +......            ..+..+++++.       +..+
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~-~~~~~~~ip~g~i---~~~~~~~------------r~~~~~l~~t~-------s~~I  294 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLD-NEYQEQISQLGYL---YPFKKDN------------KYRKQALILTN-------SDQI  294 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhC-cccCceEEEEEEE---Eeecccc------------CCcccEEEECC-------HHHH
Confidence            6789999999998888888775 3567788888765   2111111            01122334451       8899


Q ss_pred             HHHHHhhhcCCCeEEEEEeCCcc-hhHHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC
Q 044542          307 EAFSSITRDHPGVYLLVAGTGPW-GRRYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR  383 (465)
Q Consensus       307 ~a~~~l~~~~~~~~l~ivG~g~~-~~~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~  383 (465)
                      ++++++.++.|+++|.| |.+.. ...+.++.  ++|+..+.+...++.++|..||+++..|. +|++++++.||+..|+
T Consensus       295 ~~i~~Lv~~lPd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~-~e~~~~al~eA~~~G~  372 (438)
T TIGR02919       295 EHLEEIVQALPDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINH-GNEILNAVRRAFEYNL  372 (438)
T ss_pred             HHHHHHHHhCCCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccc-cccHHHHHHHHHHcCC
Confidence            99999999999999999 76554 45554443  55555444444689999999999999996 5999999999999999


Q ss_pred             eEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542          384 TVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHA  440 (465)
Q Consensus       384 PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~  440 (465)
                      |+++.+......+++.+   |.+++. ++++++++|.+++.+ ++.+++.-..-++.+
T Consensus       373 pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d-~~~~~~~~~~q~~~a  426 (438)
T TIGR02919       373 LILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLND-PNQFRELLEQQREHA  426 (438)
T ss_pred             cEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHh
Confidence            99999877544355554   788998 999999999999999 766665544444443

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.51  E-value=1e-13  Score=105.25  Aligned_cols=92  Identities=22%  Similarity=0.406  Sum_probs=84.7

Q ss_pred             eEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542          360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEH  439 (465)
Q Consensus       360 v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~  439 (465)
                      ++++|+.. .+++.+++|+||||+|||+.+.++.. +++.++..++.++ |++++.+++..++++ ++.+++++++++++
T Consensus         1 i~Ln~~~~-~~~~~r~~E~~a~G~~vi~~~~~~~~-~~~~~~~~~~~~~-~~~el~~~i~~ll~~-~~~~~~ia~~a~~~   76 (92)
T PF13524_consen    1 INLNPSRS-DGPNMRIFEAMACGTPVISDDSPGLR-EIFEDGEHIITYN-DPEELAEKIEYLLEN-PEERRRIAKNARER   76 (92)
T ss_pred             CEeeCCCC-CCCchHHHHHHHCCCeEEECChHHHH-HHcCCCCeEEEEC-CHHHHHHHHHHHHCC-HHHHHHHHHHHHHH
Confidence            46778865 89999999999999999999999988 7888888899998 999999999999999 99999999999999


Q ss_pred             HHhhCCHHHHHHHHHH
Q 044542          440 ALSMFTATKMASAYER  455 (465)
Q Consensus       440 ~~~~fs~~~~~~~~~~  455 (465)
                      ++++|+|++.++++++
T Consensus        77 v~~~~t~~~~~~~il~   92 (92)
T PF13524_consen   77 VLKRHTWEHRAEQILE   92 (92)
T ss_pred             HHHhCCHHHHHHHHHC
Confidence            9999999999998863

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.49  E-value=3.7e-12  Score=124.46  Aligned_cols=275  Identities=19%  Similarity=0.236  Sum_probs=160.8

Q ss_pred             CCCcEEEecCCc---hhHHhhhcCCc--EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcc
Q 044542          154 GAFDYVHTESVS---LPHWRAKMVPN--VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSS  228 (465)
Q Consensus       154 ~~~DiI~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (465)
                      ..-|+|.+|++.   ++..+....|+  +.+.+|-.++.   .++++.+.            .....+       +-+-.
T Consensus       140 ~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs---~e~fr~lP------------~r~eiL-------~glL~  197 (474)
T PF00982_consen  140 RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS---SEIFRCLP------------WREEIL-------RGLLG  197 (474)
T ss_dssp             -TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S-------HHHHTTST------------THHHHH-------HHHTT
T ss_pred             cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC---HHHHhhCC------------cHHHHH-------HHhhc
Confidence            356899999874   45555554443  67777765432   23332221            111111       34568


Q ss_pred             cCEEEEeChhHHHHHHH----HhCCC--C-----------CCEEEecCCCCCCCccCCcc------cCcccccccCCCCC
Q 044542          229 YNQHICISNSAAEVLVK----IYQLP--Q-----------RNVHVILNGVDETKFVHDPE------AGVRFPEKLGVPAN  285 (465)
Q Consensus       229 ~d~ii~~S~~~~~~~~~----~~~~~--~-----------~ki~vi~ngvd~~~~~~~~~------~~~~~r~~~g~~~~  285 (465)
                      ||.|-+.+...++.+..    .+|+.  .           .++.+.|-|||.+.+.....      ....++++++   +
T Consensus       198 aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~---~  274 (474)
T PF00982_consen  198 ADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK---G  274 (474)
T ss_dssp             SSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT---T
T ss_pred             CCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC---C
Confidence            89999988887776644    23321  1           23777888999887753211      1233555553   2


Q ss_pred             CcEEEEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEEEeCCc---c------hhHHHHh--------c----CCe
Q 044542          286 VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLVAGTGP---W------GRRYAEL--------G----QNV  340 (465)
Q Consensus       286 ~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g~---~------~~~~~~l--------~----~~V  340 (465)
                      +..+|+-+.|++..||+..=+.|++++.+++|+    +.|+-++...   .      +++++++        +    ..|
T Consensus       275 ~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI  354 (474)
T PF00982_consen  275 KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPI  354 (474)
T ss_dssp             -SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SE
T ss_pred             CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeE
Confidence            225566899999999999999999999998864    5666665321   1      1122221        1    224


Q ss_pred             -EEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe----EEecCCCCcceeeeeeCCceEEeCC-CHHHH
Q 044542          341 -KVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT----VLTPNYPSIVRTVVVNEELGYTFSP-NVKSF  414 (465)
Q Consensus       341 -~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P----vI~s~~gg~~~e~v~~~~~G~l~~~-d~~~l  414 (465)
                       .+.+.++.+++..+|+.||+++.+|.+ +|+.++..|+.+|..+    +|.|...|.. +.+  .+..++++| |++++
T Consensus       355 ~~~~~~~~~~~~~aly~~aDv~lvTslr-DGmNLva~Eyva~q~~~~GvLiLSefaGaa-~~L--~~~al~VNP~d~~~~  430 (474)
T PF00982_consen  355 IYIYRSLSFEELLALYRAADVALVTSLR-DGMNLVAKEYVACQDDNPGVLILSEFAGAA-EQL--SEAALLVNPWDIEEV  430 (474)
T ss_dssp             EEE-S---HHHHHHHHHH-SEEEE--SS-BS--HHHHHHHHHS-TS--EEEEETTBGGG-GT---TTS-EEE-TT-HHHH
T ss_pred             EEEecCCCHHHHHHHHHhhhhEEecchh-hccCCcceEEEEEecCCCCceEeeccCCHH-HHc--CCccEEECCCChHHH
Confidence             455678999999999999999999997 9999999999999874    7788888877 433  223489999 99999


Q ss_pred             HHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          415 VEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       415 a~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      |++|.+++..++++++...++.++++.+ ++....++.+++-++
T Consensus       431 A~ai~~AL~M~~~Er~~r~~~~~~~v~~-~~~~~W~~~~l~~L~  473 (474)
T PF00982_consen  431 ADAIHEALTMPPEERKERHARLREYVRE-HDVQWWAESFLRDLK  473 (474)
T ss_dssp             HHHHHHHHT--HHHHHHHHHHHHHHHHH-T-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHhHh-CCHHHHHHHHHHHhh
Confidence            9999999999888888888888888877 799999998887654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.41  E-value=9.9e-11  Score=108.87  Aligned_cols=320  Identities=16%  Similarity=0.124  Sum_probs=199.2

Q ss_pred             hHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCC-cccCCcceEEEeecCC--CccccCCCCCCcEEEecCC-chhH--
Q 044542           97 GMERHASTLYHALAAR--GHEIHVFTAPSDRKPHN-DVHQGNLHVHFAANDH--GSVNLNNDGAFDYVHTESV-SLPH--  168 (465)
Q Consensus        97 G~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~--~~~~~~~~~~~DiI~~~~~-~~~~--  168 (465)
                      |-...+.-|.++|.++  ++.+.+-+..+.+.... +.......+.+.+...  ..+++.+..+||++++... .++.  
T Consensus        60 GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~~~~v~rFl~~~~P~l~Ii~EtElWPnli  139 (419)
T COG1519          60 GEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDLPIAVRRFLRKWRPKLLIIMETELWPNLI  139 (419)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCchHHHHHHHHhcCCCEEEEEeccccHHHH
Confidence            5567788999999998  66766666444332222 2222224444444432  2334447889998776543 2222  


Q ss_pred             --HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH
Q 044542          169 --WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI  246 (465)
Q Consensus       169 --~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~  246 (465)
                        ...+++|.+++.-.- .         .+..            .-+..+..+.  +..+++.|.|++.|+..++.+.+ 
T Consensus       140 ~e~~~~~~p~~LvNaRL-S---------~rS~------------~~y~k~~~~~--~~~~~~i~li~aQse~D~~Rf~~-  194 (419)
T COG1519         140 NELKRRGIPLVLVNARL-S---------DRSF------------ARYAKLKFLA--RLLFKNIDLILAQSEEDAQRFRS-  194 (419)
T ss_pred             HHHHHcCCCEEEEeeee-c---------hhhh------------HHHHHHHHHH--HHHHHhcceeeecCHHHHHHHHh-
Confidence              224567733332221 0         0000            1112222222  26678999999999999999999 


Q ss_pred             hCCCCCCEEEecCC-CCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC-HHHHHHHHHHhhhcCCCeEEEEE
Q 044542          247 YQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG-HPLLYEAFSSITRDHPGVYLLVA  324 (465)
Q Consensus       247 ~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg-~~~ll~a~~~l~~~~~~~~l~iv  324 (465)
                      +|.++  +.+..|- .|.+.-.........+|++++.+  + .+++..+.   +.| -+.++++++.+++++|+..+++|
T Consensus       195 LGa~~--v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~--r-~v~iaaST---H~GEeei~l~~~~~l~~~~~~~llIlV  266 (419)
T COG1519         195 LGAKP--VVVTGNLKFDIEPPPQLAAELAALRRQLGGH--R-PVWVAAST---HEGEEEIILDAHQALKKQFPNLLLILV  266 (419)
T ss_pred             cCCcc--eEEecceeecCCCChhhHHHHHHHHHhcCCC--C-ceEEEecC---CCchHHHHHHHHHHHHhhCCCceEEEe
Confidence            68644  7776662 12211111122234567777654  2 33334444   344 44588999999999999999999


Q ss_pred             eCCcchh-----HHHHhc---------------CCeEEcCCCChhHHHHHHHhcCeEEec-ccCCCCCcHHHHHHHHcCC
Q 044542          325 GTGPWGR-----RYAELG---------------QNVKVLGALEAHQLSEFYNALDVFVNP-TLRPQGLDLTLIEAMHCGR  383 (465)
Q Consensus       325 G~g~~~~-----~~~~l~---------------~~V~~~g~v~~~~~~~~~~~aDv~v~p-s~~~eg~~~~~~EAma~G~  383 (465)
                      -.-+++-     .+++.+               .+|.+...+  -|+..+|..+|+.++- |.. +--|.-++|+.++|+
T Consensus       267 PRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGSlv-~~GGHN~LEpa~~~~  343 (419)
T COG1519         267 PRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLLYGIADIAFVGGSLV-PIGGHNPLEPAAFGT  343 (419)
T ss_pred             cCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHHHhhccEEEECCccc-CCCCCChhhHHHcCC
Confidence            8766541     222221               356666665  7999999999998874 444 344789999999999


Q ss_pred             eEEecCC----CCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          384 TVLTPNY----PSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       384 PvI~s~~----gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      |||....    ..+. +.+.+.+.|+.++ |.+.+++++..++.+ ++.+++|++++.+.+.++   ....+++.+.++
T Consensus       344 pvi~Gp~~~Nf~ei~-~~l~~~ga~~~v~-~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~---~gal~r~l~~l~  416 (419)
T COG1519         344 PVIFGPYTFNFSDIA-ERLLQAGAGLQVE-DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN---RGALARTLEALK  416 (419)
T ss_pred             CEEeCCccccHHHHH-HHHHhcCCeEEEC-CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh---hHHHHHHHHHhh
Confidence            9998543    2233 2344555677777 688888888888887 899999999999998875   334555555544

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.40  E-value=2e-12  Score=109.22  Aligned_cols=141  Identities=30%  Similarity=0.396  Sum_probs=78.2

Q ss_pred             ChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCcc------------ccC--CCCCCcEEEe
Q 044542           96 GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSV------------NLN--NDGAFDYVHT  161 (465)
Q Consensus        96 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------~~~--~~~~~DiI~~  161 (465)
                      ||+++++.+++++|.++||+|++++......... .......+...+......            ...  +..+||+||+
T Consensus         1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~   79 (160)
T PF13579_consen    1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE-EEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHA   79 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S-EEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEE
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc-cccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEe
Confidence            8999999999999999999999999877655332 223334444433222211            111  6789999999


Q ss_pred             cCCc--hhHHh---hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeC
Q 044542          162 ESVS--LPHWR---AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICIS  236 (465)
Q Consensus       162 ~~~~--~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S  236 (465)
                      +++.  +...+   ..++| ++.++|+......                ..+...+...+     ++..++++|.++++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~----------------~~~~~~~~~~~-----~~~~~~~ad~vi~~S  137 (160)
T PF13579_consen   80 HSPTAGLVAALARRRRGIP-LVVTVHGTLFRRG----------------SRWKRRLYRWL-----ERRLLRRADRVIVVS  137 (160)
T ss_dssp             EHHHHHHHHHHHHHHHT---EEEE-SS-T----------------------HHHHHHHHH-----HHHHHHH-SEEEESS
T ss_pred             cccchhHHHHHHHHccCCc-EEEEECCCchhhc----------------cchhhHHHHHH-----HHHHHhcCCEEEECC
Confidence            9852  11222   23567 9999998542210                00111222222     347789999999999


Q ss_pred             hhHHHHHHHHhCCCCCCEEEecCC
Q 044542          237 NSAAEVLVKIYQLPQRNVHVILNG  260 (465)
Q Consensus       237 ~~~~~~~~~~~~~~~~ki~vi~ng  260 (465)
                      +..++.+.+ +|++++|+.|||||
T Consensus       138 ~~~~~~l~~-~g~~~~ri~vipnG  160 (160)
T PF13579_consen  138 EAMRRYLRR-YGVPPDRIHVIPNG  160 (160)
T ss_dssp             HHHHHHHHH-H---GGGEEE----
T ss_pred             HHHHHHHHH-hCCCCCcEEEeCcC
Confidence            999999999 89999999999998

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.40  E-value=7e-11  Score=120.98  Aligned_cols=230  Identities=18%  Similarity=0.186  Sum_probs=164.6

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHh-----CCC--CCCEEEecCCCCCCCcc-CC--------------------------
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIY-----QLP--QRNVHVILNGVDETKFV-HD--------------------------  269 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~-----~~~--~~ki~vi~ngvd~~~~~-~~--------------------------  269 (465)
                      ..+..++.+-+||+-..+..++.+     +.+  ..++.-|-|||+...+. |.                          
T Consensus       347 laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~  426 (778)
T cd04299         347 LALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAV  426 (778)
T ss_pred             HHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhh
Confidence            446788999999987754444422     222  45689999999998776 21                          


Q ss_pred             ---cc-----c----Cc----cccccc-----------------C--CCCCCcEEEEEeeccccccCHHHHHHHHHHhhh
Q 044542          270 ---PE-----A----GV----RFPEKL-----------------G--VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITR  314 (465)
Q Consensus       270 ---~~-----~----~~----~~r~~~-----------------g--~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~  314 (465)
                         ++     .    +.    .++++.                 +  +.++ .++++++.|+..+||.+++++.+.++.+
T Consensus       427 ~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd-~ltigfarRfa~YKR~~Lil~dl~rl~~  505 (778)
T cd04299         427 DDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPN-VLTIGFARRFATYKRATLLLRDPERLKR  505 (778)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCC-ccEEeeeecchhhhhHHHHHHHHHHHHH
Confidence               00     0    00    111111                 2  2233 3789999999999999999998887754


Q ss_pred             c----CCCeEEEEEeCCcc-----hhH---HHHhc------CCeEEcCCCChhHHHHHHHhcCeEEeccc--CCCCCcHH
Q 044542          315 D----HPGVYLLVAGTGPW-----GRR---YAELG------QNVKVLGALEAHQLSEFYNALDVFVNPTL--RPQGLDLT  374 (465)
Q Consensus       315 ~----~~~~~l~ivG~g~~-----~~~---~~~l~------~~V~~~g~v~~~~~~~~~~~aDv~v~ps~--~~eg~~~~  374 (465)
                      -    ..+++++++|++..     ++.   +.++.      .+|.|+...+.+-...+++.+|+.++||.  . |.+|++
T Consensus       506 il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~-EAsGTS  584 (778)
T cd04299         506 LLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPL-EASGTS  584 (778)
T ss_pred             HhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCC-CCCccc
Confidence            1    13599999998641     122   22222      58999888876777778899999999997  5 999999


Q ss_pred             HHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-------------CHHHHHHHHHHHHh----C-----ChHHHHHH
Q 044542          375 LIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-------------NVKSFVEALELVIR----D-----GPKVLQRK  432 (465)
Q Consensus       375 ~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-------------d~~~la~~i~~ll~----~-----~~~~~~~~  432 (465)
                      -+-||.-|.+-+++--|... |.. ++.+|+.+.+             |.++|-+.|++.+-    +     .|..+.+|
T Consensus       585 gMKA~~NG~LnlSvlDGww~-E~~-~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~  662 (778)
T cd04299         585 GMKAALNGGLNLSVLDGWWD-EGY-DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAM  662 (778)
T ss_pred             hHHHHHcCCeeeecccCccc-ccc-CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            99999999999999888887 554 7899999965             34555566654332    2     15567788


Q ss_pred             HHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          433 GLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       433 ~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      .+++.+.+...|||++|+++|.+-|
T Consensus       663 ~k~sm~~~~p~fs~~Rmv~eY~~~~  687 (778)
T cd04299         663 MKHSMATLGPRFSAERMVREYVERF  687 (778)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHh
Confidence            8888887777999999999998754

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.39  E-value=7.4e-11  Score=113.27  Aligned_cols=273  Identities=18%  Similarity=0.242  Sum_probs=188.7

Q ss_pred             CcEEEecCCc---hhHHhhhcCCc--EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccC
Q 044542          156 FDYVHTESVS---LPHWRAKMVPN--VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYN  230 (465)
Q Consensus       156 ~DiI~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (465)
                      =|+|.+|++.   ++..+...+|.  +.+.+|-.++.   +++++-+.            +....       ..-+-.||
T Consensus       148 gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs---sEvfr~lP------------~r~eI-------l~gll~~d  205 (486)
T COG0380         148 GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS---SEVFRCLP------------WREEI-------LEGLLGAD  205 (486)
T ss_pred             CCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC---HHHHhhCc------------hHHHH-------HHHhhcCC
Confidence            3999999874   34455555553  56667764432   23332221            11111       13355788


Q ss_pred             EEEEeChhHHHHHHHHh----C------C-------CCCCEEEecCCCCCCCccCCcccC------cccccccCCCCCCc
Q 044542          231 QHICISNSAAEVLVKIY----Q------L-------PQRNVHVILNGVDETKFVHDPEAG------VRFPEKLGVPANVS  287 (465)
Q Consensus       231 ~ii~~S~~~~~~~~~~~----~------~-------~~~ki~vi~ngvd~~~~~~~~~~~------~~~r~~~g~~~~~~  287 (465)
                      .|=+.++..++.+....    +      +       ...++..+|-|||+..|......+      .++++.++  .+. 
T Consensus       206 ligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~-  282 (486)
T COG0380         206 LIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNK-  282 (486)
T ss_pred             eeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--CCc-
Confidence            88888887777665421    1      0       114677889999998876533221      22333332  223 


Q ss_pred             EEEEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEEEeCCc---ch------hHHHHh--------c----CCeEE
Q 044542          288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLVAGTGP---WG------RRYAEL--------G----QNVKV  342 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g~---~~------~~~~~l--------~----~~V~~  342 (465)
                      .+++.+.|++.-||+..=+.|++++..++|.    +.++-++...   -.      ..++++        +    ..|.+
T Consensus       283 kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~  362 (486)
T COG0380         283 KLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHY  362 (486)
T ss_pred             eEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEE
Confidence            5555789999999999999999999988874    4455555421   11      111211        1    34444


Q ss_pred             -cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC----eEEecCCCCcceeeeeeCCceEEeCC-CHHHHHH
Q 044542          343 -LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR----TVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVE  416 (465)
Q Consensus       343 -~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~----PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~  416 (465)
                       .-.++++++..+|..||+++.++.+ +|+.++..|+.+|.-    |.|.|...|.. ..+.+   .++++| |.+++++
T Consensus       363 l~~~~~~~~l~al~~~aDv~lVtplr-DGMNLvakEyVa~q~~~~G~LiLSeFaGaa-~~L~~---AliVNP~d~~~va~  437 (486)
T COG0380         363 LHRDLDRNELLALYRAADVMLVTPLR-DGMNLVAKEYVAAQRDKPGVLILSEFAGAA-SELRD---ALIVNPWDTKEVAD  437 (486)
T ss_pred             EeccCCHHHHHHHHhhhceeeecccc-ccccHHHHHHHHhhcCCCCcEEEeccccch-hhhcc---CEeECCCChHHHHH
Confidence             4558999999999999999999987 999999999999854    78888888877 44432   799999 9999999


Q ss_pred             HHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          417 ALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       417 ~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      +|.+.+..+++++++.-+..++.+.+ ++...+++.+++-+.+
T Consensus       438 ai~~AL~m~~eEr~~r~~~~~~~v~~-~d~~~W~~~fl~~la~  479 (486)
T COG0380         438 AIKRALTMSLEERKERHEKLLKQVLT-HDVARWANSFLDDLAQ  479 (486)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHh
Confidence            99999999888888877888888877 6999999998876654

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.36  E-value=5.1e-11  Score=112.99  Aligned_cols=280  Identities=19%  Similarity=0.198  Sum_probs=157.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCc---ceEEEeecCCCcccc------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGN---LHVHFAANDHGSVNL------  150 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~------  150 (465)
                      |||++.....     .-|.-.+...++++|  +||+|++++.......... ....   ..+...... +....      
T Consensus         1 MkIl~~v~~~-----G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~   71 (318)
T PF13528_consen    1 MKILFYVQGH-----GLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP-RFPVREIPGLGPIQEN-GRLDRWKTVRN   71 (318)
T ss_pred             CEEEEEeCCC-----CcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc-ccCEEEccCceEeccC-CccchHHHHHH
Confidence            8999999863     357777888999999  4899999998854311111 0010   111111110 00000      


Q ss_pred             ------------------CCCCCCcEEEecCCchhHHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchh
Q 044542          151 ------------------NNDGAFDYVHTESVSLPHWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMT  210 (465)
Q Consensus       151 ------------------~~~~~~DiI~~~~~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (465)
                                        .+..+||+|++....+..+.  ..++| .+...|..+........         +    ...
T Consensus        72 ~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~~~~~~aa~~~giP-~i~i~~~~~~~~~~~~~---------~----~~~  137 (318)
T PF13528_consen   72 NIRWLARLARRIRREIRWLREFRPDLVISDFYPLAALAARRAGIP-VIVISNQYWFLHPNFWL---------P----WDQ  137 (318)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCEEEEcChHHHHHHHHhcCCC-EEEEEehHHcccccCCc---------c----hhh
Confidence                              06788999999876544433  34678 76666654321100000         0    001


Q ss_pred             hhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEE
Q 044542          211 ELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVM  290 (465)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l  290 (465)
                      .....+.+.... ..+..++..+..+....  .     .+..++.+++..+........             +.+.+.++
T Consensus       138 ~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~--~-----~~~~~~~~~~p~~~~~~~~~~-------------~~~~~~iL  196 (318)
T PF13528_consen  138 DFGRLIERYIDR-YHFPPADRRLALSFYPP--L-----PPFFRVPFVGPIIRPEIRELP-------------PEDEPKIL  196 (318)
T ss_pred             hHHHHHHHhhhh-ccCCcccceecCCcccc--c-----cccccccccCchhcccccccC-------------CCCCCEEE
Confidence            122222222211 11344444444443310  0     001222233332222111111             12334788


Q ss_pred             EEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCC
Q 044542          291 GVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG  370 (465)
Q Consensus       291 ~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg  370 (465)
                      +++|.....    .++++++.+    ++..++++|.......    .++|.+.++. .+++.++++.||++|..+    |
T Consensus       197 v~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~~~~----~~ni~~~~~~-~~~~~~~m~~ad~vIs~~----G  259 (318)
T PF13528_consen  197 VYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAADPR----PGNIHVRPFS-TPDFAELMAAADLVISKG----G  259 (318)
T ss_pred             EEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCccccc----CCCEEEeecC-hHHHHHHHHhCCEEEECC----C
Confidence            899987655    566777765    5778888887531111    4899988875 379999999999999743    2


Q ss_pred             CcHHHHHHHHcCCeEEecCCCCccee-----eeeeCCceEEeCC---CHHHHHHHHHHH
Q 044542          371 LDLTLIEAMHCGRTVLTPNYPSIVRT-----VVVNEELGYTFSP---NVKSFVEALELV  421 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s~~gg~~~e-----~v~~~~~G~l~~~---d~~~la~~i~~l  421 (465)
                       -.++.||+++|+|+|.-...+..|+     .+.+.+.|..++.   +++.|.++|+++
T Consensus       260 -~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  260 -YTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             -HHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence             2369999999999999888665532     3445567777653   788888888754

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.36  E-value=7.3e-11  Score=123.23  Aligned_cols=274  Identities=12%  Similarity=0.138  Sum_probs=187.5

Q ss_pred             cEEEecCCc---hhHHhhhcCCc--EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCE
Q 044542          157 DYVHTESVS---LPHWRAKMVPN--VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQ  231 (465)
Q Consensus       157 DiI~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  231 (465)
                      |+|.+|.+.   ++..+.+..|.  +.+.+|-.++.   +++++.+.            +-...+       +-+-.||.
T Consensus       203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs---~eifr~LP------------~r~eiL-------~glL~aDl  260 (854)
T PLN02205        203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS---SEIYKTLP------------IREELL-------RALLNSDL  260 (854)
T ss_pred             CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC---hHHHhhCC------------cHHHHH-------HHHhcCCe
Confidence            799999874   44455444432  66777764432   22332221            111111       44557899


Q ss_pred             EEEeChhHHHHHHH----HhCCC---------------CCCEEEecCCCCCCCccCCcc------cCcccccccCCCCCC
Q 044542          232 HICISNSAAEVLVK----IYQLP---------------QRNVHVILNGVDETKFVHDPE------AGVRFPEKLGVPANV  286 (465)
Q Consensus       232 ii~~S~~~~~~~~~----~~~~~---------------~~ki~vi~ngvd~~~~~~~~~------~~~~~r~~~g~~~~~  286 (465)
                      |=+.+...++.+.+    ..|+.               .-++.+.|-|||.+.|.....      ...+++++++-  .+
T Consensus       261 IGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~--~~  338 (854)
T PLN02205        261 IGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD--QD  338 (854)
T ss_pred             EEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc--CC
Confidence            98888777766654    22322               123667888999887754221      11234555431  12


Q ss_pred             cEEEEEeeccccccCHHHHHHHHHHhhhcCCCe----EEEEEeCC-----cchh----HHHHh--------c----CCeE
Q 044542          287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGV----YLLVAGTG-----PWGR----RYAEL--------G----QNVK  341 (465)
Q Consensus       287 ~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~----~l~ivG~g-----~~~~----~~~~l--------~----~~V~  341 (465)
                      ..+++-+.|++..||+..=+.|++++.+++|++    .|+-+...     +..+    +++++        +    ..|+
T Consensus       339 ~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~  418 (854)
T PLN02205        339 RIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIV  418 (854)
T ss_pred             CEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEE
Confidence            356668999999999999999999999988865    45544421     1111    11121        1    2455


Q ss_pred             Ec-CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC-------------------eEEecCCCCcceeeeeeC
Q 044542          342 VL-GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR-------------------TVLTPNYPSIVRTVVVNE  401 (465)
Q Consensus       342 ~~-g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~-------------------PvI~s~~gg~~~e~v~~~  401 (465)
                      ++ ..++.+++..+|+.|||++.++.+ +|+.++..|+.+|..                   .+|.|...|...+ +   
T Consensus       419 ~~~~~~~~~e~~aly~~ADv~lVT~lR-DGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~-L---  493 (854)
T PLN02205        419 LIDAPLKFYERVAYYVVAECCLVTAVR-DGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPS-L---  493 (854)
T ss_pred             EEecCCCHHHHHHHHHhccEEEecccc-ccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHH-h---
Confidence            54 678999999999999999999987 999999999999864                   3677787777633 3   


Q ss_pred             CceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          402 ELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       402 ~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      ...++++| |.++++++|.+.+..++++++..-++.++++.. ++...+++.++.-+++.
T Consensus       494 ~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~-~d~~~W~~~fl~~l~~~  552 (854)
T PLN02205        494 SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVST-HDVGYWARSFLQDLERT  552 (854)
T ss_pred             CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHH
Confidence            24799999 999999999999999877777777788888877 69999999888776655

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.35  E-value=2.4e-10  Score=109.61  Aligned_cols=323  Identities=12%  Similarity=0.142  Sum_probs=181.7

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCC-----CcccCC-c---ceEEEeecC--CCc
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPH-----NDVHQG-N---LHVHFAAND--HGS  147 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-----~~~~~~-~---~~v~~~~~~--~~~  147 (465)
                      |||++++..=|   .    -.-+.-+.++|.+. ++++.++.........     .++... .   ..+......  ...
T Consensus         1 ~ki~~v~GtRp---e----~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (365)
T TIGR03568         1 KKICVVTGTRA---D----YGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEKDGFDIDEKIEILLDSDSNAG   73 (365)
T ss_pred             CeEEEEEecCh---h----HHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHHcCCCCCCccccccCCCCCCC
Confidence            68999986533   1    22467788888874 7888888766543321     111111 1   112211111  111


Q ss_pred             ------------cccCCCCCCcEEEecCCc------hhHHhhhcCCcEEEEecch-hHHHHhhhhhhhhhhcCCCCCCCc
Q 044542          148 ------------VNLNNDGAFDYVHTESVS------LPHWRAKMVPNVAVTWHGI-WYEVMHSKLFGELFSNQNGVLPGS  208 (465)
Q Consensus       148 ------------~~~~~~~~~DiI~~~~~~------~~~~~~~~~p~~v~~~h~~-~~~~~~~~~~~~~~~~~~~~~~~~  208 (465)
                                  .....+.+||+|++++..      .......++| ++ .+|+- ...                   + 
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IP-v~-HveaG~rs~-------------------~-  131 (365)
T TIGR03568        74 MAKSMGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIP-IA-HIHGGEVTE-------------------G-  131 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCc-EE-EEECCccCC-------------------C-
Confidence                        011177899999998742      3333445778 44 44432 100                   0 


Q ss_pred             hhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCC-CCCCCccCCcccCcccccccCCCCCCc
Q 044542          209 MTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVS  287 (465)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~r~~~g~~~~~~  287 (465)
                        .......+..     -+-++..++.++..++.+.+ -|.++.++.++.|. +|.-.... ......+.+++|++.+++
T Consensus       132 --~~eE~~r~~i-----~~la~l~f~~t~~~~~~L~~-eg~~~~~i~~tG~~~iD~l~~~~-~~~~~~~~~~lgl~~~~~  202 (365)
T TIGR03568       132 --AIDESIRHAI-----TKLSHLHFVATEEYRQRVIQ-MGEDPDRVFNVGSPGLDNILSLD-LLSKEELEEKLGIDLDKP  202 (365)
T ss_pred             --CchHHHHHHH-----HHHHhhccCCCHHHHHHHHH-cCCCCCcEEEECCcHHHHHHhhh-ccCHHHHHHHhCCCCCCC
Confidence              0001111111     13345667788888888877 58888899988774 44322211 112356677888865444


Q ss_pred             EEEEEeeccc--cccCHHHHHHHHHHhhhcCCCeEEEEEeCCc-c---hhHHHHh---cCCeEEcCCCChhHHHHHHHhc
Q 044542          288 LVMGVAGRLV--RDKGHPLLYEAFSSITRDHPGVYLLVAGTGP-W---GRRYAEL---GQNVKVLGALEAHQLSEFYNAL  358 (465)
Q Consensus       288 ~~l~~~Grl~--~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~-~---~~~~~~l---~~~V~~~g~v~~~~~~~~~~~a  358 (465)
                      ++++.+-+-.  .....+.+.+.++.+.+...++.++.-..++ .   .+.++++   .++|.+++.++..++..+++.|
T Consensus       203 ~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a  282 (365)
T TIGR03568       203 YALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNA  282 (365)
T ss_pred             EEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhC
Confidence            6655554432  3333344444444444332344332211222 1   2334443   2689999999999999999999


Q ss_pred             CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHH
Q 044542          359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKE  438 (465)
Q Consensus       359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~  438 (465)
                      |++|-.|.    -  .+-||.++|+|+|+-  +.-+ +.+..+.+.+++..|++++.+++.+++ + ++.++.+     .
T Consensus       283 ~~vitdSS----g--gi~EA~~lg~Pvv~l--~~R~-e~~~~g~nvl~vg~~~~~I~~a~~~~~-~-~~~~~~~-----~  346 (365)
T TIGR03568       283 DAVIGNSS----S--GIIEAPSFGVPTINI--GTRQ-KGRLRADSVIDVDPDKEEIVKAIEKLL-D-PAFKKSL-----K  346 (365)
T ss_pred             CEEEEcCh----h--HHHhhhhcCCCEEee--cCCc-hhhhhcCeEEEeCCCHHHHHHHHHHHh-C-hHHHHHH-----h
Confidence            99996431    2  338999999999964  3444 667777788878669999999999954 4 3332222     1


Q ss_pred             HHHhhCCHHHHHHHHHHH
Q 044542          439 HALSMFTATKMASAYERF  456 (465)
Q Consensus       439 ~~~~~fs~~~~~~~~~~~  456 (465)
                      ....-|...+.++++.++
T Consensus       347 ~~~~pygdg~as~rI~~~  364 (365)
T TIGR03568       347 NVKNPYGDGNSSERIIEI  364 (365)
T ss_pred             hCCCCCCCChHHHHHHHh
Confidence            122335555555555543

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>TIGR03492 conserved hypothetical protein

Probab=99.34  E-value=4.2e-10  Score=109.00  Aligned_cols=207  Identities=12%  Similarity=0.046  Sum_probs=133.0

Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecccc--ccCHH
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVR--DKGHP  303 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~--~Kg~~  303 (465)
                      -+.|+.+.+..+...+.+.+ .|   .++.++.|++-........       .  +++++.+.++++.|+-..  .+++.
T Consensus       158 ~~~a~~v~~~~~~t~~~l~~-~g---~k~~~vGnPv~d~l~~~~~-------~--~l~~~~~~lllLpGSR~ae~~~~lp  224 (396)
T TIGR03492       158 SRRCLAVFVRDRLTARDLRR-QG---VRASYLGNPMMDGLEPPER-------K--PLLTGRFRIALLPGSRPPEAYRNLK  224 (396)
T ss_pred             chhhCEEeCCCHHHHHHHHH-CC---CeEEEeCcCHHhcCccccc-------c--ccCCCCCEEEEECCCCHHHHHccHH
Confidence            36778888888888888876 45   3889999987443221110       0  444455466666676533  56778


Q ss_pred             HHHHHHHHhhhcCCCeEEEEEe-CCcchhHHHH-h---c----------------CCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          304 LLYEAFSSITRDHPGVYLLVAG-TGPWGRRYAE-L---G----------------QNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       304 ~ll~a~~~l~~~~~~~~l~ivG-~g~~~~~~~~-l---~----------------~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      .+++++..+.++ +++.+++.- .+...+.+++ +   +                +++.+..+.  .++.++|+.||++|
T Consensus       225 ~~l~al~~L~~~-~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~ADlvI  301 (396)
T TIGR03492       225 LLLRALEALPDS-QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR--GAFAEILHWADLGI  301 (396)
T ss_pred             HHHHHHHHHhhC-CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEech--HhHHHHHHhCCEEE
Confidence            999999999766 677776543 3333333322 1   2                125555554  68999999999999


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCCCCcce--eeeeeC----CceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHH
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR--TVVVNE----ELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLA  435 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~--e~v~~~----~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~  435 (465)
                      ..|      |.+..|++++|+|+|....++...  .+....    ..+..+.. +++.+++++.++++| ++.+++|.++
T Consensus       302 ~rS------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d-~~~~~~~~~~  374 (396)
T TIGR03492       302 AMA------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD-PELLERCRRN  374 (396)
T ss_pred             ECc------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence            854      246699999999999987433210  111110    23444444 899999999999998 8888888755


Q ss_pred             HHHHHHhhCCHHHHHHHHHH
Q 044542          436 CKEHALSMFTATKMASAYER  455 (465)
Q Consensus       436 ~~~~~~~~fs~~~~~~~~~~  455 (465)
                      +++...+....+.+++.+.+
T Consensus       375 ~~~~lg~~~a~~~ia~~i~~  394 (396)
T TIGR03492       375 GQERMGPPGASARIAESILK  394 (396)
T ss_pred             HHHhcCCCCHHHHHHHHHHH
Confidence            55554443455555554443

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=99.30  E-value=2.5e-10  Score=109.13  Aligned_cols=337  Identities=16%  Similarity=0.154  Sum_probs=205.0

Q ss_pred             CCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc--ccCCcceEEEeec-CC-Cccc
Q 044542           74 GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND--VHQGNLHVHFAAN-DH-GSVN  149 (465)
Q Consensus        74 ~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~~v~~~~~-~~-~~~~  149 (465)
                      ....+++||+++++.+    .....+.....+.+.+.+..+||..+.......+...  +......+.-... .. ..-.
T Consensus       254 ~~~~~rlRvGylS~dl----r~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~dal~~rI~a~~~~~~~~~~~dd~e~a~  329 (620)
T COG3914         254 KRNGKRLRVGYLSSDL----RSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTDALQERISAAVEKWYPIGRMDDAEIAN  329 (620)
T ss_pred             cccccceeEEEecccc----ccchHHHHHHHHHHHhchhheEEEEEecCCCCchhHHHHHHHhhhheeccCCcCHHHHHH
Confidence            3456788999999986    4456667788888888887789888887733332221  1211111111110 00 0011


Q ss_pred             cCCCCCCcEEEecCC----chhHHhhh-cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHH
Q 044542          150 LNNDGAFDYVHTESV----SLPHWRAK-MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIR  224 (465)
Q Consensus       150 ~~~~~~~DiI~~~~~----~~~~~~~~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (465)
                      .+...+.||.+--+.    .-...++. --| +.++|-|.+.....               +    .            .
T Consensus       330 ~I~~d~IdILvDl~g~T~d~r~~v~A~RpAP-iqvswlGy~aT~g~---------------p----~------------~  377 (620)
T COG3914         330 AIRTDGIDILVDLDGHTVDTRCQVFAHRPAP-IQVSWLGYPATTGS---------------P----N------------M  377 (620)
T ss_pred             HHHhcCCeEEEeccCceeccchhhhhcCCCc-eEEeecccccccCC---------------C----c------------c
Confidence            115667888764321    12222222 235 88888875421000               0    0            0


Q ss_pred             hhcccCEEEEeChhHHHHHHHHh-CCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542          225 FFSSYNQHICISNSAAEVLVKIY-QLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP  303 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~~~~~~~-~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~  303 (465)
                      -+--+|..+.+ +...+++.+.. .+|     -.+-++|  .+.+...  .--|..+|+|++. ++++++++  ..|-..
T Consensus       378 DY~I~D~y~vP-p~ae~yysEkl~RLp-----~cy~p~d--~~~~v~p--~~sR~~lglp~~a-vVf~c~~n--~~K~~p  444 (620)
T COG3914         378 DYFISDPYTVP-PTAEEYYSEKLWRLP-----QCYQPVD--GFEPVTP--PPSRAQLGLPEDA-VVFCCFNN--YFKITP  444 (620)
T ss_pred             eEEeeCceecC-chHHHHHHHHHHhcc-----cccCCCC--CcccCCC--CcchhhcCCCCCe-EEEEecCC--cccCCH
Confidence            01112333444 66666666542 222     1122333  3333222  2457889999987 67666654  578888


Q ss_pred             HHHHHHHHhhhcCCCeEEEEEeCCcchh---HHHHh----c---CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcH
Q 044542          304 LLYEAFSSITRDHPGVYLLVAGTGPWGR---RYAEL----G---QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDL  373 (465)
Q Consensus       304 ~ll~a~~~l~~~~~~~~l~ivG~g~~~~---~~~~l----~---~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~  373 (465)
                      .+++.+.++.+..|+-.|++.|.|+..+   .++++    +   ++.+|.+..+.++..+.|..||+++-+..  -|-..
T Consensus       445 ev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyP--Y~g~T  522 (620)
T COG3914         445 EVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYP--YGGHT  522 (620)
T ss_pred             HHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeeccc--CCCcc
Confidence            8888888888888999999998875543   23332    2   89999999999999999999999998653  46678


Q ss_pred             HHHHHHHcCCeEEecCCCCcc----eeeeeeCC-ceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHh--hCCH
Q 044542          374 TLIEAMHCGRTVLTPNYPSIV----RTVVVNEE-LGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALS--MFTA  446 (465)
Q Consensus       374 ~~~EAma~G~PvI~s~~gg~~----~e~v~~~~-~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--~fs~  446 (465)
                      +.+||+.+|+|||+--.....    +.++.+-+ .-+++. +.++.++.-..+-.+ ...+++.+..-++....  -|+.
T Consensus       523 Ta~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~-s~~dYV~~av~~g~d-ral~q~~r~~l~~~r~tspL~d~  600 (620)
T COG3914         523 TASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVAD-SRADYVEKAVAFGSD-RALRQQVRAELKRSRQTSPLFDP  600 (620)
T ss_pred             chHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcC-CHHHHHHHHHHhccc-HHHHHhhHHHHHhccccCcccCH
Confidence            999999999999974211111    02222222 223333 777887777777777 65666665544444433  5899


Q ss_pred             HHHHHHHHHHHHHhcCC
Q 044542          447 TKMASAYERFFLRMKNP  463 (465)
Q Consensus       447 ~~~~~~~~~~~~~~~~~  463 (465)
                      +..+++++++|.++.++
T Consensus       601 ~~far~le~~y~~M~~~  617 (620)
T COG3914         601 KAFARKLETLYWGMWSE  617 (620)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999987654

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=1e-09  Score=101.37  Aligned_cols=338  Identities=15%  Similarity=0.127  Sum_probs=206.3

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeCCCCCCCCC-----cc-cCCcceEEEeecCCC-cc
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTAPSDRKPHN-----DV-HQGNLHVHFAANDHG-SV  148 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~~~~-----~~-~~~~~~v~~~~~~~~-~~  148 (465)
                      +.+|||++|...-|       -..-+..+++++.+.+ .+..|+..........     +. ....+....--...+ ..
T Consensus         1 m~~~Kv~~I~GTRP-------E~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl   73 (383)
T COG0381           1 MKMLKVLTIFGTRP-------EAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTL   73 (383)
T ss_pred             CCceEEEEEEecCH-------HHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCH
Confidence            35789999986543       2345778899999886 7777776665442111     11 111122222222111 11


Q ss_pred             ------------ccCCCCCCcEEEecCC---chh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchh
Q 044542          149 ------------NLNNDGAFDYVHTESV---SLP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMT  210 (465)
Q Consensus       149 ------------~~~~~~~~DiI~~~~~---~~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (465)
                                  ....+.+||+|.+|+-   .+.   .....++| +...--|.......  +..               
T Consensus        74 ~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~Ip-V~HvEAGlRt~~~~--~PE---------------  135 (383)
T COG0381          74 GEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIP-VGHVEAGLRTGDLY--FPE---------------  135 (383)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCc-eEEEecccccCCCC--CcH---------------
Confidence                        1117899999999964   222   23345677 66555554321000  000               


Q ss_pred             hhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccC-C-cccCcccccc-cCCCCCCc
Q 044542          211 ELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH-D-PEAGVRFPEK-LGVPANVS  287 (465)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~-~-~~~~~~~r~~-~g~~~~~~  287 (465)
                      .+.+.+        .-.-++..+++++..++.+.+ -|++++++.++.|.+-...... . .........+ ++.. +++
T Consensus       136 E~NR~l--------~~~~S~~hfapte~ar~nLl~-EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~-~~~  205 (383)
T COG0381         136 EINRRL--------TSHLSDLHFAPTEIARKNLLR-EGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDK-DKK  205 (383)
T ss_pred             HHHHHH--------HHHhhhhhcCChHHHHHHHHH-cCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccc-cCc
Confidence            111111        113456679999999999988 5999999999999753211111 0 1101111211 2322 333


Q ss_pred             EEEEEeeccccc-cCHHHHHHHHHHhhhcCCCeEEEEEeCCc--chhH-HHHhc--CCeEEcCCCChhHHHHHHHhcCeE
Q 044542          288 LVMGVAGRLVRD-KGHPLLYEAFSSITRDHPGVYLLVAGTGP--WGRR-YAELG--QNVKVLGALEAHQLSEFYNALDVF  361 (465)
Q Consensus       288 ~~l~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~--~~~~-~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~  361 (465)
                      ++++.+-|.... +++..+.+++.++.++++++.++.--...  .++. .+.|+  ++|.++..+...+...+++.|-+.
T Consensus       206 ~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~i  285 (383)
T COG0381         206 YILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLI  285 (383)
T ss_pred             EEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEE
Confidence            777677666553 89999999999999988777766654322  1222 24455  679999999999999999999777


Q ss_pred             EecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044542          362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHAL  441 (465)
Q Consensus       362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~  441 (465)
                      +--|      |...=||-..|+||++-+...-+.|.+..| .-.++..+.+.+.+++..++++ ++.+++|+...--+..
T Consensus       286 ltDS------GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~~~~~i~~~~~~ll~~-~~~~~~m~~~~npYgd  357 (383)
T COG0381         286 LTDS------GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVGTDEENILDAATELLED-EEFYERMSNAKNPYGD  357 (383)
T ss_pred             EecC------CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeCccHHHHHHHHHHHhhC-hHHHHHHhcccCCCcC
Confidence            7533      337889999999999877665554655444 4555555999999999999999 7888888765433333


Q ss_pred             hhCCHHHHHHHHHHHHH
Q 044542          442 SMFTATKMASAYERFFL  458 (465)
Q Consensus       442 ~~fs~~~~~~~~~~~~~  458 (465)
                      .+ +.+++++.+...+.
T Consensus       358 g~-as~rIv~~l~~~~~  373 (383)
T COG0381         358 GN-ASERIVEILLNYFD  373 (383)
T ss_pred             cc-hHHHHHHHHHHHhh
Confidence            32 44555554444443

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.20  E-value=1.2e-09  Score=100.91  Aligned_cols=248  Identities=15%  Similarity=0.087  Sum_probs=141.9

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCC-------ccccCCC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHG-------SVNLNND  153 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~  153 (465)
                      ||+|.+..-+  ....|.-.+...||++|.++|++|.+++..........+...+..+........       .....++
T Consensus         1 ~i~ir~Da~~--~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~   78 (279)
T TIGR03590         1 KILFRADASS--EIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESSRYDDALELINLLEE   78 (279)
T ss_pred             CEEEEecCCc--cccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHh
Confidence            5778877643  233466678999999999999999999987644322222223333333322211       1122256


Q ss_pred             CCCcEEEecCCchhH----HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhccc
Q 044542          154 GAFDYVHTESVSLPH----WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSY  229 (465)
Q Consensus       154 ~~~DiI~~~~~~~~~----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (465)
                      .+||+|++.++.+..    .++...+ .+..+-|....                                      -..+
T Consensus        79 ~~~d~vV~D~y~~~~~~~~~~k~~~~-~l~~iDD~~~~--------------------------------------~~~~  119 (279)
T TIGR03590        79 EKFDILIVDHYGLDADWEKLIKEFGR-KILVIDDLADR--------------------------------------PHDC  119 (279)
T ss_pred             cCCCEEEEcCCCCCHHHHHHHHHhCC-eEEEEecCCCC--------------------------------------CcCC
Confidence            689999998764322    2222334 44455543100                                      0145


Q ss_pred             CEEEEeChhHHHHHHHHhC-CCCCCEEEecC---CCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHH
Q 044542          230 NQHICISNSAAEVLVKIYQ-LPQRNVHVILN---GVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLL  305 (465)
Q Consensus       230 d~ii~~S~~~~~~~~~~~~-~~~~ki~vi~n---gvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~l  305 (465)
                      |.++..+.. .+... +.+ +++........   .+..++....+.   ...+     .+.+-+++++|...+.+....+
T Consensus       120 D~vin~~~~-~~~~~-y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~~---~~~~-----~~~~~iLi~~GG~d~~~~~~~~  189 (279)
T TIGR03590       120 DLLLDQNLG-ADASD-YQGLVPANCRLLLGPSYALLREEFYQLATA---NKRR-----KPLRRVLVSFGGADPDNLTLKL  189 (279)
T ss_pred             CEEEeCCCC-cCHhH-hcccCcCCCeEEecchHHhhhHHHHHhhHh---hhcc-----cccCeEEEEeCCcCCcCHHHHH
Confidence            766666554 22222 122 34343333322   122221111110   0000     0123466688887777766778


Q ss_pred             HHHHHHhhhcCCCeE-EEEEeCC-cchhHHHHhc---CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHH
Q 044542          306 YEAFSSITRDHPGVY-LLVAGTG-PWGRRYAELG---QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMH  380 (465)
Q Consensus       306 l~a~~~l~~~~~~~~-l~ivG~g-~~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma  380 (465)
                      ++++..+.   ++++ .+++|.+ +..+.+++..   .++.+.+++  +++.++|+.||++|.+      .|.++.|+++
T Consensus       190 l~~l~~~~---~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~--~~m~~lm~~aDl~Is~------~G~T~~E~~a  258 (279)
T TIGR03590       190 LSALAESQ---INISITLVTGSSNPNLDELKKFAKEYPNIILFIDV--ENMAELMNEADLAIGA------AGSTSWERCC  258 (279)
T ss_pred             HHHHhccc---cCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCH--HHHHHHHHHCCEEEEC------CchHHHHHHH
Confidence            88887653   2333 3366765 3444444432   689999998  7999999999999973      2369999999


Q ss_pred             cCCeEEecCC
Q 044542          381 CGRTVLTPNY  390 (465)
Q Consensus       381 ~G~PvI~s~~  390 (465)
                      +|+|+|+...
T Consensus       259 ~g~P~i~i~~  268 (279)
T TIGR03590       259 LGLPSLAICL  268 (279)
T ss_pred             cCCCEEEEEe
Confidence            9999998654

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.17  E-value=3.4e-09  Score=97.07  Aligned_cols=327  Identities=15%  Similarity=0.124  Sum_probs=202.4

Q ss_pred             CCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cc-cCCcceEEEeecCCC--ccccCCCCCCcEEEecCC-----
Q 044542           94 APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DV-HQGNLHVHFAANDHG--SVNLNNDGAFDYVHTESV-----  164 (465)
Q Consensus        94 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~-~~~~~~v~~~~~~~~--~~~~~~~~~~DiI~~~~~-----  164 (465)
                      ..+|...+...+.++|...||++..+-+........ +. ...+....+......  .....+..++|+|.....     
T Consensus        12 y~~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k~rd~~~~~~~~~~~~~~~~e~~~~~~i~~fk~d~iv~~~~~~~~~   91 (373)
T COG4641          12 YNNGSAEYYRGLLRALKMDGMKVLFLESGDFWDYKNRDIDAEDGCTEAFYKDQPELESLLYIREFKPDIIVNMSGDDQPD   91 (373)
T ss_pred             hcCCchhhHHHHHHHHHhccceEEEEecccHHhhhcccccCccchhheeecCcHHHHHHHHHHhcCCcEEEEeccccccc
Confidence            457778888999999999999999998887554433 22 122222222211111  111227889999987643     


Q ss_pred             -----chhHHhhh-cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChh
Q 044542          165 -----SLPHWRAK-MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNS  238 (465)
Q Consensus       165 -----~~~~~~~~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~  238 (465)
                           .+..|+.. .+| +++..-+.+.........                     ....+. ++.+-..|.|++.+..
T Consensus        92 ~~~~~~~~a~l~~~~l~-~~~w~te~p~~~~~~~~~---------------------~~~~~~-~~~l~~fd~v~~~g~~  148 (373)
T COG4641          92 EESTIDLWAWLKRKCLP-VIVWYTEDPYDTDIFSQV---------------------AEEQLA-RRPLFIFDNVLSFGGG  148 (373)
T ss_pred             ceehHHHHHHhhcCCcc-eEEEEeccchhhhhhhhh---------------------hHHHhh-ccccchhhhhhhccch
Confidence                 13333332 445 555555444332211111                     111110 0122233445666665


Q ss_pred             H-HHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCC
Q 044542          239 A-AEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP  317 (465)
Q Consensus       239 ~-~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~  317 (465)
                      . ++.+.+..+  ..++..++.++|...|.+-+.+.           ....-+.++|...+. ..+.+-+.+.+-..+..
T Consensus       149 l~~~~yyq~~~--~~~~~~~~~a~d~~~~~~i~~da-----------~~~~dL~~ign~~pD-r~e~~ke~~~~ps~kl~  214 (373)
T COG4641         149 LVANKYYQEGG--ARNCYYLPWAVDDSLFHPIPPDA-----------SYDVDLNLIGNPYPD-RVEEIKEFFVEPSFKLM  214 (373)
T ss_pred             HHHHHHHHhhc--ccceeccCccCCchhcccCCccc-----------cceeeeEEecCCCcc-HHHHHHHHhhccchhhh
Confidence            5 455543333  47889999999999887755321           111356678876654 22233333322111111


Q ss_pred             -CeEEEEEeCCcchhHHHH-hcCCeEEcCCCCh-hHHHHHHHhcCeEEecccC--CCC---CcHHHHHHHHcCCeEEecC
Q 044542          318 -GVYLLVAGTGPWGRRYAE-LGQNVKVLGALEA-HQLSEFYNALDVFVNPTLR--PQG---LDLTLIEAMHCGRTVLTPN  389 (465)
Q Consensus       318 -~~~l~ivG~g~~~~~~~~-l~~~V~~~g~v~~-~~~~~~~~~aDv~v~ps~~--~eg---~~~~~~EAma~G~PvI~s~  389 (465)
                       +-++...|..-....... ..+++..+|+++. ..+...++..|+.++-+..  .++   +.+-+.|+++||.|.|+..
T Consensus       215 v~rr~~~~g~~y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~  294 (373)
T COG4641         215 VDRRFYVLGPRYPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDY  294 (373)
T ss_pred             ccceeeecCCccchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCcccccc
Confidence             244666665411111111 2268888998866 8899999999999884321  122   3789999999999999988


Q ss_pred             CCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          390 YPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       390 ~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      ..+.. ....+|+.-++.. |.+++.+++..++.. ++.++++++.+++++...|+.+.-+..+.+....+
T Consensus       295 ~~~~e-~~f~pgk~~iv~~-d~kdl~~~~~yll~h-~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI  362 (373)
T COG4641         295 WKDLE-KFFKPGKDIIVYQ-DSKDLKEKLKYLLNH-PDERKEIAECAYERVLARHTYEERIFKLLNEIASI  362 (373)
T ss_pred             HHHHH-HhcCCchheEEec-CHHHHHHHHHHHhcC-cchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence            87775 5666666544444 999999999999999 88999999999999999999999998888777654

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=99.16  E-value=2.2e-09  Score=90.57  Aligned_cols=157  Identities=16%  Similarity=0.195  Sum_probs=103.0

Q ss_pred             eEEEEeC-CCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC-CCccccC-------
Q 044542           81 KLAVFSK-TWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND-HGSVNLN-------  151 (465)
Q Consensus        81 kIl~v~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~-------  151 (465)
                      ||+++.. ..|  +..||.|+++.+|+..|.++||+|+|+|......... ....+..+...+.. .+.....       
T Consensus         3 kIaIiGtrGIP--a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~-~~y~gv~l~~i~~~~~g~~~si~yd~~sl   79 (185)
T PF09314_consen    3 KIAIIGTRGIP--ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKE-FEYNGVRLVYIPAPKNGSAESIIYDFLSL   79 (185)
T ss_pred             eEEEEeCCCCC--cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCC-cccCCeEEEEeCCCCCCchHHHHHHHHHH
Confidence            7999976 577  6899999999999999999999999999876543332 22233333333222 2211111       


Q ss_pred             ---------CCCCCcEEEecCCch---h-HHhh----hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542          152 ---------NDGAFDYVHTESVSL---P-HWRA----KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE  214 (465)
Q Consensus       152 ---------~~~~~DiI~~~~~~~---~-~~~~----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (465)
                               .+.+.|+++++....   . .+..    .+.+ +++..||....   ..              .+. ...+
T Consensus        80 ~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~-v~vN~DGlEWk---R~--------------KW~-~~~k  140 (185)
T PF09314_consen   80 LHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGK-VVVNMDGLEWK---RA--------------KWG-RPAK  140 (185)
T ss_pred             HHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCc-EEECCCcchhh---hh--------------hcC-HHHH
Confidence                     234688999887542   1 1221    1335 89999987532   00              111 1111


Q ss_pred             hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCC
Q 044542          215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVD  262 (465)
Q Consensus       215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd  262 (465)
                      ... .+.|+...+.+|.+|+.|+.+.+++++.|+  ..++.+|++|.|
T Consensus       141 ~~l-k~~E~~avk~ad~lIaDs~~I~~y~~~~y~--~~~s~~IaYGad  185 (185)
T PF09314_consen  141 KYL-KFSEKLAVKYADRLIADSKGIQDYIKERYG--RKKSTFIAYGAD  185 (185)
T ss_pred             HHH-HHHHHHHHHhCCEEEEcCHHHHHHHHHHcC--CCCcEEecCCCC
Confidence            111 233456679999999999999999999987  578899999976

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=99.16  E-value=1.1e-09  Score=105.33  Aligned_cols=181  Identities=17%  Similarity=0.225  Sum_probs=121.4

Q ss_pred             cccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcc-hh----HHHHhc---CCeEEcCC
Q 044542          274 VRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW-GR----RYAELG---QNVKVLGA  345 (465)
Q Consensus       274 ~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~----~~~~l~---~~V~~~g~  345 (465)
                      ...|+.+|+|++. ++++++.++  .|=-+..++++.++.+..|+.+|++...+.. ++    .+++.+   +++.|.+.
T Consensus       273 ~~~R~~~gLp~d~-vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~  349 (468)
T PF13844_consen  273 VTTRAQYGLPEDA-VVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPV  349 (468)
T ss_dssp             EEETGGGT--SSS-EEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE-
T ss_pred             ccCHHHcCCCCCc-eEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCC
Confidence            3578899999887 777666654  6777888999999999999999988764432 22    233344   89999999


Q ss_pred             CChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce----eeeeeCCceEEeCCCHHHHHHHHHHH
Q 044542          346 LEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR----TVVVNEELGYTFSPNVKSFVEALELV  421 (465)
Q Consensus       346 v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~----e~v~~~~~G~l~~~d~~~la~~i~~l  421 (465)
                      .+.++....|+.+|+++-+-.+  +-+++.+||+.+|+|||+-......+    .++..-+..-++..|.+++++.-.++
T Consensus       350 ~~~~ehl~~~~~~DI~LDT~p~--nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~L  427 (468)
T PF13844_consen  350 APREEHLRRYQLADICLDTFPY--NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRL  427 (468)
T ss_dssp             --HHHHHHHGGG-SEEE--SSS----SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHH
T ss_pred             CCHHHHHHHhhhCCEEeeCCCC--CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHH
Confidence            9888998999999999997544  55789999999999999976544441    11111111223334899999999999


Q ss_pred             HhCChHHHHHHHHHHHHHHHh--hCCHHHHHHHHHHHHHHh
Q 044542          422 IRDGPKVLQRKGLACKEHALS--MFTATKMASAYERFFLRM  460 (465)
Q Consensus       422 l~~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~  460 (465)
                      ..| ++.+++++++-++...+  -|+....++.+++.|+++
T Consensus       428 a~D-~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m  467 (468)
T PF13844_consen  428 ATD-PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM  467 (468)
T ss_dssp             HH--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred             hCC-HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence            999 99999999988877644  489999999999999875

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.15  E-value=3.5e-09  Score=103.91  Aligned_cols=151  Identities=19%  Similarity=0.164  Sum_probs=93.7

Q ss_pred             CCcEEEEEeecccc---ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeE
Q 044542          285 NVSLVMGVAGRLVR---DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVF  361 (465)
Q Consensus       285 ~~~~~l~~~Grl~~---~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~  361 (465)
                      +++.+++..|....   .+-...+++++..+    +.-.++.+|......  ..+.++|.+.+++|..   .++..||++
T Consensus       238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~----~~~~i~~~g~~~~~~--~~~~~~v~~~~~~p~~---~ll~~~d~~  308 (401)
T cd03784         238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL----GQRAILSLGWGGLGA--EDLPDNVRVVDFVPHD---WLLPRCAAV  308 (401)
T ss_pred             CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc----CCeEEEEccCccccc--cCCCCceEEeCCCCHH---HHhhhhhee
Confidence            44567777888753   23334455555543    222345566543322  3345899999998644   568889999


Q ss_pred             EecccCCCCCcHHHHHHHHcCCeEEecCCCCc----ceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHH
Q 044542          362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI----VRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGL  434 (465)
Q Consensus       362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~----~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~  434 (465)
                      |.   + .| ..++.||+++|+|+|+....+-    . +.+.+.+.|..+..   +++++.+++.+++++ + .+++..+
T Consensus       309 I~---h-gG-~~t~~eal~~GvP~v~~P~~~dQ~~~a-~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~-~-~~~~~~~  380 (401)
T cd03784         309 VH---H-GG-AGTTAAALRAGVPQLVVPFFGDQPFWA-ARVAELGAGPALDPRELTAERLAAALRRLLDP-P-SRRRAAA  380 (401)
T ss_pred             ee---c-CC-chhHHHHHHcCCCEEeeCCCCCcHHHH-HHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH-H-HHHHHHH
Confidence            96   2 23 4699999999999999876542    2 23445566777654   689999999999985 3 3444443


Q ss_pred             HHHHHHHhhCCHHHHHHHH
Q 044542          435 ACKEHALSMFTATKMASAY  453 (465)
Q Consensus       435 ~~~~~~~~~fs~~~~~~~~  453 (465)
                      .+++. ++.-..+..++.+
T Consensus       381 ~~~~~-~~~~g~~~~~~~i  398 (401)
T cd03784         381 LLRRI-REEDGVPSAADVI  398 (401)
T ss_pred             HHHHH-HhccCHHHHHHHH
Confidence            33332 2223444444443

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=99.11  E-value=3.2e-09  Score=97.87  Aligned_cols=330  Identities=13%  Similarity=0.063  Sum_probs=189.7

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCC--cce------EEEeecCCCcc--
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQG--NLH------VHFAANDHGSV--  148 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~--~~~------v~~~~~~~~~~--  148 (465)
                      +|||++++.+-      +| ...-..|.++|+++=-++.++...+......-....  ...      +......+..+  
T Consensus         1 ~~ki~i~AGE~------SG-DllGa~LikaLk~~~~~~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~   73 (381)
T COG0763           1 MLKIALSAGEA------SG-DLLGAGLIKALKARYPDVEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKI   73 (381)
T ss_pred             CceEEEEeccc------ch-hhHHHHHHHHHHhhCCCeEEEEeccHHHHhccCccccCHHHHHHhhHHHHHHHHHHHHHH
Confidence            36899998752      33 455668999998872277777766533221100000  000      00000000111  


Q ss_pred             -----ccCCCCCCcEEEecCC-c----hhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHH
Q 044542          149 -----NLNNDGAFDYVHTESV-S----LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPR  218 (465)
Q Consensus       149 -----~~~~~~~~DiI~~~~~-~----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (465)
                           +.....+||++++-++ .    +...+.+..| .+-++|-..+.                    ...|-.++.. 
T Consensus        74 ~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p-~i~iihYV~Ps--------------------VWAWr~~Ra~-  131 (381)
T COG0763          74 RRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGP-KIKIIHYVSPS--------------------VWAWRPKRAV-  131 (381)
T ss_pred             HHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCC-CCCeEEEECcc--------------------eeeechhhHH-
Confidence                 1115789999887653 2    3334444444 23333322110                    0001111111 


Q ss_pred             HHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecccc
Q 044542          219 LVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVR  298 (465)
Q Consensus       219 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~  298 (465)
                           ...+.+|+++++=+...+.+.+ +|++   ++.|.|+.-.+.  +...++...|+++|++.+.+.+.+..|+-..
T Consensus       132 -----~i~~~~D~lLailPFE~~~y~k-~g~~---~~yVGHpl~d~i--~~~~~r~~ar~~l~~~~~~~~lalLPGSR~s  200 (381)
T COG0763         132 -----KIAKYVDHLLAILPFEPAFYDK-FGLP---CTYVGHPLADEI--PLLPDREAAREKLGIDADEKTLALLPGSRRS  200 (381)
T ss_pred             -----HHHHHhhHeeeecCCCHHHHHh-cCCC---eEEeCChhhhhc--cccccHHHHHHHhCCCCCCCeEEEecCCcHH
Confidence                 3456789999999999999988 6754   677777653222  2223345689999999998888888886433


Q ss_pred             --ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh--cCCe-EEcCCCChhHHHHHHHhcCeEEecccCCCCCcH
Q 044542          299 --DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL--GQNV-KVLGALEAHQLSEFYNALDVFVNPTLRPQGLDL  373 (465)
Q Consensus       299 --~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l--~~~V-~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~  373 (465)
                        .+-...+.+|++.+++++|+.++++--.....+.++..  ...+ ...-.+.+.+-.+.+.+||+.+..|      |+
T Consensus       201 EI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS------GT  274 (381)
T COG0763         201 EIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS------GT  274 (381)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc------cH
Confidence              46677889999999999999999997765443333222  1111 1222234468889999999998754      56


Q ss_pred             HHHHHHHcCCeEEec-CCC----------------CcceeeeeeCC-ceEEe-CC-CHHHHHHHHHHHHhCChHHHHHHH
Q 044542          374 TLIEAMHCGRTVLTP-NYP----------------SIVRTVVVNEE-LGYTF-SP-NVKSFVEALELVIRDGPKVLQRKG  433 (465)
Q Consensus       374 ~~~EAma~G~PvI~s-~~g----------------g~~~e~v~~~~-~G~l~-~~-d~~~la~~i~~ll~~~~~~~~~~~  433 (465)
                      +.+|++.+|+|.|++ +..                +.+ .++.+.. .--++ +. .++.+++++..++.| .+.++++.
T Consensus       275 ~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLp-NIi~~~~ivPEliq~~~~pe~la~~l~~ll~~-~~~~~~~~  352 (381)
T COG0763         275 ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLP-NILAGREIVPELIQEDCTPENLARALEELLLN-GDRREALK  352 (381)
T ss_pred             HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccch-HHhcCCccchHHHhhhcCHHHHHHHHHHHhcC-hHhHHHHH
Confidence            999999999999864 322                222 2222211 00011 12 699999999999999 54444444


Q ss_pred             HH---HHHHHHhhCCHHHHHHHHHHH
Q 044542          434 LA---CKEHALSMFTATKMASAYERF  456 (465)
Q Consensus       434 ~~---~~~~~~~~fs~~~~~~~~~~~  456 (465)
                      +.   -++.+......+..++.+.++
T Consensus       353 ~~~~~l~~~l~~~~~~e~aA~~vl~~  378 (381)
T COG0763         353 EKFRELHQYLREDPASEIAAQAVLEL  378 (381)
T ss_pred             HHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence            43   333343433344444444443

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=99.06  E-value=1.6e-08  Score=94.38  Aligned_cols=283  Identities=13%  Similarity=0.102  Sum_probs=162.6

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC-CCccccC-------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND-HGSVNLN-------  151 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~-------  151 (465)
                      |||++-... |      ..-.+...+++.|.++||+|.+.+......... +...+......... .......       
T Consensus         1 MkIwiDi~~-p------~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~L-L~~yg~~y~~iG~~g~~~~~Kl~~~~~R~   72 (335)
T PF04007_consen    1 MKIWIDITH-P------AHVHFFKNIIRELEKRGHEVLITARDKDETEEL-LDLYGIDYIVIGKHGDSLYGKLLESIERQ   72 (335)
T ss_pred             CeEEEECCC-c------hHHHHHHHHHHHHHhCCCEEEEEEeccchHHHH-HHHcCCCeEEEcCCCCCHHHHHHHHHHHH
Confidence            788887664 1      235678899999999999999998876432111 11122222222111 1111111       


Q ss_pred             -------CCCCCcEEEecCCchh--HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          152 -------NDGAFDYVHTESVSLP--HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       152 -------~~~~~DiI~~~~~~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                             ++.+||++++.+....  .....++| .+....+-... .                       .   .+    
T Consensus        73 ~~l~~~~~~~~pDv~is~~s~~a~~va~~lgiP-~I~f~D~e~a~-~-----------------------~---~~----  120 (335)
T PF04007_consen   73 YKLLKLIKKFKPDVAISFGSPEAARVAFGLGIP-SIVFNDTEHAI-A-----------------------Q---NR----  120 (335)
T ss_pred             HHHHHHHHhhCCCEEEecCcHHHHHHHHHhCCC-eEEEecCchhh-c-----------------------c---ce----
Confidence                   6789999998765333  33445678 55555431110 0                       0   00    


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccc---
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD---  299 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~---  299 (465)
                       ..+.-++.++++.-.-.+.+.+ +|.. +++ .-+||++...+-..-.....+.+++|++++ +++++   |..+.   
T Consensus       121 -Lt~Pla~~i~~P~~~~~~~~~~-~G~~-~~i-~~y~G~~E~ayl~~F~Pd~~vl~~lg~~~~-~yIvv---R~~~~~A~  192 (335)
T PF04007_consen  121 -LTLPLADVIITPEAIPKEFLKR-FGAK-NQI-RTYNGYKELAYLHPFKPDPEVLKELGLDDE-PYIVV---RPEAWKAS  192 (335)
T ss_pred             -eehhcCCeeECCcccCHHHHHh-cCCc-CCE-EEECCeeeEEeecCCCCChhHHHHcCCCCC-CEEEE---EeccccCe
Confidence             2245678888776555555555 6743 222 237888865443333334578889997754 46553   33332   


Q ss_pred             --cCH-HHHHHHHHHhhhcCCCeEEEEEeCCcch-hHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542          300 --KGH-PLLYEAFSSITRDHPGVYLLVAGTGPWG-RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL  375 (465)
Q Consensus       300 --Kg~-~~ll~a~~~l~~~~~~~~l~ivG~g~~~-~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~  375 (465)
                        +|- ..+-+.+..+.+.+ +. ++++.....+ +.+++..  +.+...-  -+..+++..||++|-      +-|+..
T Consensus       193 y~~~~~~i~~~ii~~L~~~~-~~-vV~ipr~~~~~~~~~~~~--~~i~~~~--vd~~~Ll~~a~l~Ig------~ggTMa  260 (335)
T PF04007_consen  193 YDNGKKSILPEIIEELEKYG-RN-VVIIPRYEDQRELFEKYG--VIIPPEP--VDGLDLLYYADLVIG------GGGTMA  260 (335)
T ss_pred             eecCccchHHHHHHHHHhhC-ce-EEEecCCcchhhHHhccC--ccccCCC--CCHHHHHHhcCEEEe------CCcHHH
Confidence              222 23446667776653 33 5556544333 3333322  4433321  356689999999994      235789


Q ss_pred             HHHHHcCCeEEecCCCCc--ceeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542          376 IEAMHCGRTVLTPNYPSI--VRTVVVNEELGYTFSP-NVKSFVEALELVIRD  424 (465)
Q Consensus       376 ~EAma~G~PvI~s~~gg~--~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~  424 (465)
                      .||...|+|.|.+-.|..  .++.+.  +.|+++.. |++++.+.+.+....
T Consensus       261 ~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~~  310 (335)
T PF04007_consen  261 REAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLGK  310 (335)
T ss_pred             HHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhhc
Confidence            999999999998754322  112222  34788887 999998866665543

They are found in archaea and some bacteria and have no known function.

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=99.00  E-value=1.8e-07  Score=88.68  Aligned_cols=121  Identities=12%  Similarity=0.134  Sum_probs=79.9

Q ss_pred             CcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecc
Q 044542          286 VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPT  365 (465)
Q Consensus       286 ~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps  365 (465)
                      ++.++++.|.    .+...+++++.++    +++.+++ |.....  ...+.+++.+.++.+ +++.++|..||++|..+
T Consensus       188 ~~~iLv~~g~----~~~~~l~~~l~~~----~~~~~i~-~~~~~~--~~~~~~~v~~~~~~~-~~~~~~l~~ad~vI~~~  255 (321)
T TIGR00661       188 EDYILVYIGF----EYRYKILELLGKI----ANVKFVC-YSYEVA--KNSYNENVEIRRITT-DNFKELIKNAELVITHG  255 (321)
T ss_pred             CCcEEEECCc----CCHHHHHHHHHhC----CCeEEEE-eCCCCC--ccccCCCEEEEECCh-HHHHHHHHhCCEEEECC
Confidence            3456656554    3445667776655    4555443 432211  123458999999876 78999999999999843


Q ss_pred             cCCCCCcHHHHHHHHcCCeEEecCCCCccee-----eeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542          366 LRPQGLDLTLIEAMHCGRTVLTPNYPSIVRT-----VVVNEELGYTFSP-NVKSFVEALELVIRD  424 (465)
Q Consensus       366 ~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e-----~v~~~~~G~l~~~-d~~~la~~i~~ll~~  424 (465)
                          |+ .++.||+++|+|+|.....+..++     .+.+.+.|..++. +. ++.+++...+.+
T Consensus       256 ----G~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~  314 (321)
T TIGR00661       256 ----GF-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNM  314 (321)
T ss_pred             ----Ch-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhcccc
Confidence                22 379999999999999888764422     3555667888876 55 555566555554

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=98.94  E-value=5.7e-09  Score=99.06  Aligned_cols=211  Identities=12%  Similarity=0.127  Sum_probs=122.2

Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCccccccc---CC--CCCCcEEEEEeecccc---
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKL---GV--PANVSLVMGVAGRLVR---  298 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~---g~--~~~~~~~l~~~Grl~~---  298 (465)
                      +-++..++.++..++.+.+ .|+++++|.++.|..-.......    ....+++   ++  ...++++++..-+...   
T Consensus       121 ~la~lhf~~t~~~~~~L~~-~G~~~~rI~~vG~~~~D~l~~~~----~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~  195 (346)
T PF02350_consen  121 KLAHLHFAPTEEARERLLQ-EGEPPERIFVVGNPGIDALLQNK----EEIEEKYKNSGILQDAPKPYILVTLHPVTNEDN  195 (346)
T ss_dssp             HH-SEEEESSHHHHHHHHH-TT--GGGEEE---HHHHHHHHHH----HTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTH
T ss_pred             hhhhhhccCCHHHHHHHHh-cCCCCCeEEEEChHHHHHHHHhH----HHHhhhhhhHHHHhccCCCEEEEEeCcchhcCC
Confidence            4568889999999999998 69999999999885321111111    1111111   22  2344577766644433   


Q ss_pred             ccCHHHHHHHHHHhhhcCCCeEEEEEeC--Ccchh----HHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          299 DKGHPLLYEAFSSITRDHPGVYLLVAGT--GPWGR----RYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       299 ~Kg~~~ll~a~~~l~~~~~~~~l~ivG~--g~~~~----~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      ......+.+++..+.+. +++.+++...  .....    .++++ ++++++..+++.++..+++.|+++|--|      |
T Consensus       196 ~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~vvgdS------s  267 (346)
T PF02350_consen  196 PERLEQILEALKALAER-QNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADLVVGDS------S  267 (346)
T ss_dssp             H--HHHHHHHHHHHHHH-TTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHHHESEEEESS------H
T ss_pred             hHHHHHHHHHHHHHHhc-CCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceEEEEcC------c
Confidence            24466788888888877 6788888775  22222    23334 6999999999999999999999998643      2


Q ss_pred             HHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      ...-||..+|+|+|.-+..+.+.+.+..+.+- ++..|.+++.+++.+++.+ ++.+..+..     ...-|.-.+.+++
T Consensus       268 GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nv-lv~~~~~~I~~ai~~~l~~-~~~~~~~~~-----~~npYgdG~as~r  340 (346)
T PF02350_consen  268 GIQEEAPSLGKPVVNIRDSGERQEGRERGSNV-LVGTDPEAIIQAIEKALSD-KDFYRKLKN-----RPNPYGDGNASER  340 (346)
T ss_dssp             HHHHHGGGGT--EEECSSS-S-HHHHHTTSEE-EETSSHHHHHHHHHHHHH--HHHHHHHHC-----S--TT-SS-HHHH
T ss_pred             cHHHHHHHhCCeEEEecCCCCCHHHHhhcceE-EeCCCHHHHHHHHHHHHhC-hHHHHhhcc-----CCCCCCCCcHHHH
Confidence            24449999999999986655554555555444 4767999999999999987 554444322     1223544555555


Q ss_pred             HHHHH
Q 044542          453 YERFF  457 (465)
Q Consensus       453 ~~~~~  457 (465)
                      +.+++
T Consensus       341 I~~~L  345 (346)
T PF02350_consen  341 IVEIL  345 (346)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            55554

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=98.92  E-value=3.7e-07  Score=91.20  Aligned_cols=135  Identities=17%  Similarity=0.118  Sum_probs=89.1

Q ss_pred             EEEEEeecccc-----ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHH--HhcCe
Q 044542          288 LVMGVAGRLVR-----DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFY--NALDV  360 (465)
Q Consensus       288 ~~l~~~Grl~~-----~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~--~~aDv  360 (465)
                      .+++..|....     .+-...+++|++.+    + .++++...+....  ..+.+||.+.+++|+.+   ++  ..+++
T Consensus       298 ~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~~~--~~~p~Nv~i~~w~Pq~~---lL~hp~v~~  367 (507)
T PHA03392        298 VVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEVEA--INLPANVLTQKWFPQRA---VLKHKNVKA  367 (507)
T ss_pred             EEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCcCc--ccCCCceEEecCCCHHH---HhcCCCCCE
Confidence            66667887643     22345566666665    3 4565555433222  24568999999998654   55  55888


Q ss_pred             EEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHH
Q 044542          361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGL  434 (465)
Q Consensus       361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~  434 (465)
                      +|.-     |-..++.||+.+|+|+|+....+-..   ..+++.+.|..++.   +.+++.++|.+++.+ ++.+++..+
T Consensus       368 fItH-----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~-~~y~~~a~~  441 (507)
T PHA03392        368 FVTQ-----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIEN-PKYRKNLKE  441 (507)
T ss_pred             EEec-----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCC-HHHHHHHHH
Confidence            8862     22458999999999999976543110   23445567887764   789999999999998 666555444


Q ss_pred             HHHH
Q 044542          435 ACKE  438 (465)
Q Consensus       435 ~~~~  438 (465)
                      -++.
T Consensus       442 ls~~  445 (507)
T PHA03392        442 LRHL  445 (507)
T ss_pred             HHHH
Confidence            3333

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=98.91  E-value=7.6e-08  Score=93.36  Aligned_cols=163  Identities=17%  Similarity=0.111  Sum_probs=109.2

Q ss_pred             CCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeE
Q 044542          282 VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVF  361 (465)
Q Consensus       282 ~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~  361 (465)
                      ++.+++++.+..|.....   ..+++.+...... -+.++++...+ .+.....+.+|+...+++|+.+   ++..||++
T Consensus       233 ~~~d~~~vyvslGt~~~~---~~l~~~~~~a~~~-l~~~vi~~~~~-~~~~~~~~p~n~~v~~~~p~~~---~l~~ad~v  304 (406)
T COG1819         233 IPADRPIVYVSLGTVGNA---VELLAIVLEALAD-LDVRVIVSLGG-ARDTLVNVPDNVIVADYVPQLE---LLPRADAV  304 (406)
T ss_pred             hcCCCCeEEEEcCCcccH---HHHHHHHHHHHhc-CCcEEEEeccc-cccccccCCCceEEecCCCHHH---HhhhcCEE
Confidence            455666777777876544   3333333222222 25666666644 3335566678999999997555   89999999


Q ss_pred             EecccCCCCCcHHHHHHHHcCCeEEecCCCCcc---eeeeeeCCceEEeC--C-CHHHHHHHHHHHHhCChHHHHHHHHH
Q 044542          362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIV---RTVVVNEELGYTFS--P-NVKSFVEALELVIRDGPKVLQRKGLA  435 (465)
Q Consensus       362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~---~e~v~~~~~G~l~~--~-d~~~la~~i~~ll~~~~~~~~~~~~~  435 (465)
                      |+..    | -.++.||+.+|+|+|+-..+.-.   .+.+++-+.|....  . +.+.++++|.+++.+ +..++. .++
T Consensus       305 I~hG----G-~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~-~~~~~~-~~~  377 (406)
T COG1819         305 IHHG----G-AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLAD-DSYRRA-AER  377 (406)
T ss_pred             EecC----C-cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcC-HHHHHH-HHH
Confidence            9854    2 23899999999999987665211   03456667888887  4 999999999999998 554444 344


Q ss_pred             HHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          436 CKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       436 ~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      .++.+.+.-..++.++.++++..+
T Consensus       378 ~~~~~~~~~g~~~~a~~le~~~~~  401 (406)
T COG1819         378 LAEEFKEEDGPAKAADLLEEFARE  401 (406)
T ss_pred             HHHHhhhcccHHHHHHHHHHHHhc
Confidence            555555555666677777766654

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.90  E-value=1.5e-07  Score=89.11  Aligned_cols=188  Identities=13%  Similarity=0.163  Sum_probs=124.1

Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecccc--ccCHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVR--DKGHPL  304 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~--~Kg~~~  304 (465)
                      +.+|+++++=+...+++.+ .|+   +++.+.|+.-.. ..+.. .....++++ ++++++++.+..|+-..  .+.+..
T Consensus       132 ~~~D~ll~ifPFE~~~y~~-~g~---~~~~VGHPl~d~-~~~~~-~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~  204 (373)
T PF02684_consen  132 KYVDHLLVIFPFEPEFYKK-HGV---PVTYVGHPLLDE-VKPEP-DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPI  204 (373)
T ss_pred             HHHhheeECCcccHHHHhc-cCC---CeEEECCcchhh-hccCC-CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHH
Confidence            5668999999999999988 463   578888875322 11211 123455666 77788778778886432  456688


Q ss_pred             HHHHHHHhhhcCCCeEEEEEeCCcchhH-HHHh----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHH
Q 044542          305 LYEAFSSITRDHPGVYLLVAGTGPWGRR-YAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAM  379 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~-~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAm  379 (465)
                      ++++++++.+++|++++++.......+. +++.    ..++...-  ...+-.+.+++||+.+..|      |++.+|++
T Consensus       205 ~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~m~~ad~al~~S------GTaTLE~A  276 (373)
T PF02684_consen  205 FLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVI--IEGESYDAMAAADAALAAS------GTATLEAA  276 (373)
T ss_pred             HHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEE--cCCchHHHHHhCcchhhcC------CHHHHHHH
Confidence            9999999999999999998875433322 3222    22232221  1257788999999999755      56999999


Q ss_pred             HcCCeEEe-cCCC----------------CcceeeeeeC-CceEEeC-C-CHHHHHHHHHHHHhCChHHHHH
Q 044542          380 HCGRTVLT-PNYP----------------SIVRTVVVNE-ELGYTFS-P-NVKSFVEALELVIRDGPKVLQR  431 (465)
Q Consensus       380 a~G~PvI~-s~~g----------------g~~~e~v~~~-~~G~l~~-~-d~~~la~~i~~ll~~~~~~~~~  431 (465)
                      .+|+|.|+ .+.+                +++ .++.+. ...-++. . +++.+++++..++.| ++.++.
T Consensus       277 l~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~-Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~-~~~~~~  346 (373)
T PF02684_consen  277 LLGVPMVVAYKVSPLTYFIAKRLVKVKYISLP-NIIAGREVVPELIQEDATPENIAAELLELLEN-PEKRKK  346 (373)
T ss_pred             HhCCCEEEEEcCcHHHHHHHHHhhcCCEeech-hhhcCCCcchhhhcccCCHHHHHHHHHHHhcC-HHHHHH
Confidence            99999885 3332                222 222211 1111222 3 899999999999999 555333

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=98.69  E-value=4.5e-07  Score=88.64  Aligned_cols=160  Identities=19%  Similarity=0.240  Sum_probs=102.0

Q ss_pred             CCcEEEEEeeccccccCHHHHHH-HHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542          285 NVSLVMGVAGRLVRDKGHPLLYE-AFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVN  363 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~~ll~-a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~  363 (465)
                      +++.+++..|+....+. + +++ ++..+.+. +.-.++.+|.+...+.++++.++|.+.+++++.   +++..||++|.
T Consensus       224 ~~~~v~vs~Gs~~~~~~-~-~~~~~~~al~~~-~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~---~ll~~~~~~I~  297 (392)
T TIGR01426       224 GRPVVLISLGTVFNNQP-S-FYRTCVEAFRDL-DWHVVLSVGRGVDPADLGELPPNVEVRQWVPQL---EILKKADAFIT  297 (392)
T ss_pred             CCCEEEEecCccCCCCH-H-HHHHHHHHHhcC-CCeEEEEECCCCChhHhccCCCCeEEeCCCCHH---HHHhhCCEEEE
Confidence            44577778888643322 2 333 22323222 323355567665545555566899999999754   67899999997


Q ss_pred             cccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542          364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACK  437 (465)
Q Consensus       364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~  437 (465)
                      .+    |. .++.||+++|+|+|+....+-..   ..+.+.+.|..+..   ++++++++|.+++.+ ++.++++.+ .+
T Consensus       298 hg----G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~-~~~~~~~~~-l~  370 (392)
T TIGR01426       298 HG----GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSD-PRYAERLRK-MR  370 (392)
T ss_pred             CC----Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcC-HHHHHHHHH-HH
Confidence            43    32 38899999999999976543221   22444566777753   689999999999998 765555533 34


Q ss_pred             HHHHhhCCHHHHHHHHHHHH
Q 044542          438 EHALSMFTATKMASAYERFF  457 (465)
Q Consensus       438 ~~~~~~fs~~~~~~~~~~~~  457 (465)
                      +.+...-..+..++.+++++
T Consensus       371 ~~~~~~~~~~~aa~~i~~~~  390 (392)
T TIGR01426       371 AEIREAGGARRAADEIEGFL  390 (392)
T ss_pred             HHHHHcCCHHHHHHHHHHhh
Confidence            44444457777777666654

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.64  E-value=1.3e-06  Score=84.71  Aligned_cols=193  Identities=15%  Similarity=0.253  Sum_probs=105.9

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCH-
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGH-  302 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~-  302 (465)
                      ......|.+++.|+..++.+.+.++.+.+++.+...+-....+.........+++.++++.+++ +|+|+-.+...... 
T Consensus       130 ~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k-~ILyaPT~R~~~~~~  208 (369)
T PF04464_consen  130 RNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKK-VILYAPTWRDNSSNE  208 (369)
T ss_dssp             HHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-E-EEEEE----GGG--G
T ss_pred             hhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCc-EEEEeeccccccccc
Confidence            4567889999999999999999999888777765544322223333333346777888887774 66687655443222 


Q ss_pred             -----H--HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHH---hcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          303 -----P--LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE---LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       303 -----~--~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~---l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                           .  .-.+.+..+.  .+++.+++-...........   ..++|.+...-  +++.+++..||++|.=      ++
T Consensus       209 ~~~~~~~~~~~~~l~~~~--~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~aDiLITD------yS  278 (369)
T PF04464_consen  209 YFKFFFSDLDFEKLNFLL--KNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAADILITD------YS  278 (369)
T ss_dssp             GSS----TT-HHHHHHHH--TTTEEEEE--SHHHHTT----TT-TTTEEE-TT---S-HHHHHHT-SEEEES------S-
T ss_pred             cccccccccCHHHHHHHh--CCCcEEEEEeCchhhhchhhhhccCCcEEECCCC--CCHHHHHHhcCEEEEe------ch
Confidence                 1  1223333222  25788888775433333322   23777776653  5899999999999952      34


Q ss_pred             HHHHHHHHcCCeEEec--CCCCcce--ee---eeeCCceEEeCCCHHHHHHHHHHHHhCChHHH
Q 044542          373 LTLIEAMHCGRTVLTP--NYPSIVR--TV---VVNEELGYTFSPNVKSFVEALELVIRDGPKVL  429 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s--~~gg~~~--e~---v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~  429 (465)
                      .++.|++.+++|||-.  |......  ..   ..+...|-++. +.++|.++|..++.+ +...
T Consensus       279 Si~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~-~~~eL~~~i~~~~~~-~~~~  340 (369)
T PF04464_consen  279 SIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVY-NFEELIEAIENIIEN-PDEY  340 (369)
T ss_dssp             THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EES-SHHHHHHHHTTHHHH-HHHT
T ss_pred             hHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeC-CHHHHHHHHHhhhhC-CHHH
Confidence            4999999999999954  3311100  11   12334566666 899999999999887 4443

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=98.64  E-value=5.9e-06  Score=81.94  Aligned_cols=303  Identities=10%  Similarity=0.065  Sum_probs=170.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC--cccCCcceEEEe------ecCCCcc---
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN--DVHQGNLHVHFA------ANDHGSV---  148 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~~~~~~~v~~~------~~~~~~~---  148 (465)
                      .||.+++.+      .+| ..+...|+++|+++.-++.+....+......  +.-.........      ...+..+   
T Consensus       227 ~kIfI~AGE------~SG-DlhgA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~l~d~~eLsVmG~~EVL~~l~~l~~~~  299 (608)
T PRK01021        227 TSCFISAGE------HSG-DTLGGNLLKEIKALYPDIHCFGVGGPQMRAEGFHPLFNMEEFQVSGFWEVLLALFKLWYRY  299 (608)
T ss_pred             CeEEEEecc------ccH-HHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCcccCChHHhhhhhHHHHHHHHHHHHHHH
Confidence            489988865      244 5677899999999866777776555332211  100000000000      0000000   


Q ss_pred             ----ccCCCCCCcEEEecCC-chhHHhh-----hcC--CcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhh
Q 044542          149 ----NLNNDGAFDYVHTESV-SLPHWRA-----KMV--PNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAM  216 (465)
Q Consensus       149 ----~~~~~~~~DiI~~~~~-~~~~~~~-----~~~--p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (465)
                          ....+.+||++++-++ ++...++     .++  | ++..+--                    .-   ..|-.++.
T Consensus       300 ~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ip-viyYVsP--------------------qV---WAWR~~Ri  355 (608)
T PRK01021        300 RKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGK-IVHYVCP--------------------SI---WAWRPKRK  355 (608)
T ss_pred             HHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCC-EEEEECc--------------------cc---eeeCcchH
Confidence                1116789999988543 3222222     222  4 4433321                    00   01112222


Q ss_pred             HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc
Q 044542          217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL  296 (465)
Q Consensus       217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl  296 (465)
                      .      ..-+..|+++++=+...+.+++ .|+   +++.+.|+.-.. ... ...+.+.++++|++++++++.+..|+-
T Consensus       356 k------ki~k~vD~ll~IfPFE~~~y~~-~gv---~v~yVGHPL~d~-i~~-~~~~~~~r~~lgl~~~~~iIaLLPGSR  423 (608)
T PRK01021        356 T------ILEKYLDLLLLILPFEQNLFKD-SPL---RTVYLGHPLVET-ISS-FSPNLSWKEQLHLPSDKPIVAAFPGSR  423 (608)
T ss_pred             H------HHHHHhhhheecCccCHHHHHh-cCC---CeEEECCcHHhh-ccc-CCCHHHHHHHcCCCCCCCEEEEECCCC
Confidence            2      3335679999999999999988 564   567788875222 211 222345688899987777777788864


Q ss_pred             cc--ccCHHHHHHHHH--HhhhcCCCeEEEEEeCCcc-hhHHHHhc---C--CeEEcCCCChhHHHHHHHhcCeEEeccc
Q 044542          297 VR--DKGHPLLYEAFS--SITRDHPGVYLLVAGTGPW-GRRYAELG---Q--NVKVLGALEAHQLSEFYNALDVFVNPTL  366 (465)
Q Consensus       297 ~~--~Kg~~~ll~a~~--~l~~~~~~~~l~ivG~g~~-~~~~~~l~---~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~  366 (465)
                      ..  .+....+++|++  .+.+   +.++++....+. .+.+++.-   +  .+.+..   .++-.+++++||+.+..| 
T Consensus       424 ~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~---~~~~~~~m~aaD~aLaaS-  496 (608)
T PRK01021        424 RGDILRNLTIQVQAFLASSLAS---THQLLVSSANPKYDHLILEVLQQEGCLHSHIVP---SQFRYELMRECDCALAKC-  496 (608)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCchhhHHHHHHHHhhcCCCCeEEec---CcchHHHHHhcCeeeecC-
Confidence            32  466778888887  5543   577776543322 33444422   1  223321   123479999999999855 


Q ss_pred             CCCCCcHHHHHHHHcCCeEEe-cCCCCcce-----------------eeeeeCC-ceEEe---CC-CHHHHHHHHHHHHh
Q 044542          367 RPQGLDLTLIEAMHCGRTVLT-PNYPSIVR-----------------TVVVNEE-LGYTF---SP-NVKSFVEALELVIR  423 (465)
Q Consensus       367 ~~eg~~~~~~EAma~G~PvI~-s~~gg~~~-----------------e~v~~~~-~G~l~---~~-d~~~la~~i~~ll~  423 (465)
                           |++.+|++.+|+|.|+ .+.+...-                 .++.+.+ .--++   +. +++.+++++ +++.
T Consensus       497 -----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~  570 (608)
T PRK01021        497 -----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILK  570 (608)
T ss_pred             -----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhc
Confidence                 5699999999999986 33332110                 1121111 12233   23 899999996 8888


Q ss_pred             CChHHHHHHHHHHHHH
Q 044542          424 DGPKVLQRKGLACKEH  439 (465)
Q Consensus       424 ~~~~~~~~~~~~~~~~  439 (465)
                      | ++.++++.+...+.
T Consensus       571 d-~~~r~~~~~~l~~l  585 (608)
T PRK01021        571 T-SQSKEKQKDACRDL  585 (608)
T ss_pred             C-HHHHHHHHHHHHHH
Confidence            8 66666666554443

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.59  E-value=1.1e-05  Score=72.72  Aligned_cols=211  Identities=11%  Similarity=0.100  Sum_probs=124.8

Q ss_pred             HhhcccCEEEEeChhHHHH-HHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc-ccccC
Q 044542          224 RFFSSYNQHICISNSAAEV-LVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL-VRDKG  301 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~-~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl-~~~Kg  301 (465)
                      ...++..++++ ......+ -++.++++.+ ....|.-.++........ +         .+.+++.| .+|+- ++..+
T Consensus        94 ~aq~rvg~v~a-trGD~~~~a~~~~~v~~~-llyfpt~m~~~l~~~~~~-~---------~~~~~~tI-lvGNSgd~SN~  160 (322)
T PRK02797         94 LAQKRVGHVFA-TRGDLSYFAQRHPKVPGS-LLYFPTRMDPSLNTMAND-R---------QRAGKMTI-LVGNSGDRSNR  160 (322)
T ss_pred             HHHhhcCeEEE-ecchHHHHHHhcCCCCcc-EEecCCcchhhhcccccc-c---------cCCCceEE-EEeCCCCCccc
Confidence            44578889999 5444455 5666676543 333332222211111100 0         11234666 35554 55677


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEE-eC--Cc--chhHHHHh-----c-CCeEE-cCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVA-GT--GP--WGRRYAEL-----G-QNVKV-LGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~iv-G~--g~--~~~~~~~l-----~-~~V~~-~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      +..+++++++...  .++++++- |-  |.  +.+.+++.     + +++.. ..+++.+|..++++.||+.++.-.+-+
T Consensus       161 Hie~L~~l~~~~~--~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQ  238 (322)
T PRK02797        161 HIEALRALHQQFG--DNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQ  238 (322)
T ss_pred             HHHHHHHHHHHhC--CCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhh
Confidence            7777777766643  57776664 43  22  22233222     2 56655 567899999999999999999766568


Q ss_pred             CCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542          370 GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA  446 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  446 (465)
                      |.|+.++ .+.+|+||+.++....-.++ .+.+.-++++.   |...+.+           ..+++....++.+.  |+.
T Consensus       239 giGnl~l-Li~~G~~v~l~r~n~fwqdl-~e~gv~Vlf~~d~L~~~~v~e-----------~~rql~~~dk~~I~--Ff~  303 (322)
T PRK02797        239 GIGTLCL-LIQLGKPVVLSRDNPFWQDL-TEQGLPVLFTGDDLDEDIVRE-----------AQRQLASVDKNIIA--FFS  303 (322)
T ss_pred             HHhHHHH-HHHCCCcEEEecCCchHHHH-HhCCCeEEecCCcccHHHHHH-----------HHHHHHhhCcceee--ecC
Confidence            8887666 89999999987544443244 33334454543   2222222           22334444444443  999


Q ss_pred             HHHHHHHHHHHHHhcCCC
Q 044542          447 TKMASAYERFFLRMKNPY  464 (465)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~  464 (465)
                      ++..+.|.+++.....+.
T Consensus       304 pn~~~~W~~~l~~~~g~~  321 (322)
T PRK02797        304 PNYLQGWRNALAIAAGEV  321 (322)
T ss_pred             HhHHHHHHHHHHHhhCCC
Confidence            999999999998876653

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=98.59  E-value=9.2e-05  Score=72.13  Aligned_cols=196  Identities=14%  Similarity=0.116  Sum_probs=107.5

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCc-cc---CcccccccCCCCCCcEEEEEeeccccc
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDP-EA---GVRFPEKLGVPANVSLVMGVAGRLVRD  299 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~-~~---~~~~r~~~g~~~~~~~~l~~~Grl~~~  299 (465)
                      ..++++|.|.+-.+...+.+.+ +|++..++.+.+..+   ..-+.. ..   ...+...++....++.+-+.+..+.+.
T Consensus       172 ~vl~~~~~ItvRD~~S~~~Lk~-lGv~~~~v~~~aDpA---F~L~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~  247 (426)
T PRK10017        172 YVFGHCDALILRESVSLDLMKR-SNITTAKVEHGVDTA---WLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPF  247 (426)
T ss_pred             HHHhcCCEEEEccHHHHHHHHH-hCCCccceEEecChh---hhCCccccccccchhhhhhhcccccCCEEEEEecccccc
Confidence            5578999988888888888877 799877888876433   211111 00   001111122222333333333333211


Q ss_pred             -c--C------HHHHHHHHHHhhhcCCCeEEEEEeC-----Cc-chhHHHH----hc--CCeE-EcCCCChhHHHHHHHh
Q 044542          300 -K--G------HPLLYEAFSSITRDHPGVYLLVAGT-----GP-WGRRYAE----LG--QNVK-VLGALEAHQLSEFYNA  357 (465)
Q Consensus       300 -K--g------~~~ll~a~~~l~~~~~~~~l~ivG~-----g~-~~~~~~~----l~--~~V~-~~g~v~~~~~~~~~~~  357 (465)
                       +  |      ...+.+++..+.+++-++.|+-.-.     ++ +....++    +.  ++++ +.+..+..++..+++.
T Consensus       248 ~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~  327 (426)
T PRK10017        248 DKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGA  327 (426)
T ss_pred             cccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhh
Confidence             1  1      1344566666666543444333211     11 1111222    22  2333 3444556789999999


Q ss_pred             cCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeee-CCceEEeC--C-CHHHHHHHHHHHHhCChHHHH
Q 044542          358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN-EELGYTFS--P-NVKSFVEALELVIRDGPKVLQ  430 (465)
Q Consensus       358 aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~-~~~G~l~~--~-d~~~la~~i~~ll~~~~~~~~  430 (465)
                      +|++|-.-.+      .++=|++.|+|+|+-....=...+..+ +...++++  . +.++|.+.+.+++++ .+..+
T Consensus       328 ~dl~ig~RlH------a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~-r~~~~  397 (426)
T PRK10017        328 CELTVGTRLH------SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ-LPALN  397 (426)
T ss_pred             CCEEEEecch------HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhC-HHHHH
Confidence            9999986655      778899999999986543111111111 11223333  3 788999999999999 54433

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=98.55  E-value=2e-05  Score=71.71  Aligned_cols=303  Identities=13%  Similarity=0.117  Sum_probs=163.3

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCcccCCcceEEEeecCC---CccccC--
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH---GSVNLN--  151 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~--  151 (465)
                      .|||++.++..    ..=|.-++...++++|.+.  |.+|.+++......... .......|.......   +.....  
T Consensus         9 ~~Ri~~Yshd~----~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~-~~~gVd~V~LPsl~k~~~G~~~~~d~   83 (400)
T COG4671           9 RPRILFYSHDL----LGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFP-GPAGVDFVKLPSLIKGDNGEYGLVDL   83 (400)
T ss_pred             cceEEEEehhh----ccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCC-CcccCceEecCceEecCCCceeeeec
Confidence            45999999864    2236667889999999998  99999999876543322 112222222222111   111111  


Q ss_pred             -------------------CCCCCcEEEecCCch---------hHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCC
Q 044542          152 -------------------NDGAFDYVHTESVSL---------PHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNG  203 (465)
Q Consensus       152 -------------------~~~~~DiI~~~~~~~---------~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  203 (465)
                                         +..+|||+++....+         ...+...-++.+....+..-      ..+...     
T Consensus        84 ~~~l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D------~p~~~~-----  152 (400)
T COG4671          84 DGDLEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRD------IPQELE-----  152 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhhh------chhhhc-----
Confidence                               788999999986422         22222222334444444311      111000     


Q ss_pred             CCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCC-CCEEEecCCCCCCCccCCcccCcccccccCC
Q 044542          204 VLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQ-RNVHVILNGVDETKFVHDPEAGVRFPEKLGV  282 (465)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~-~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~  282 (465)
                        ..   |-..-..+     .+-+.+|.|.+..+..-..+.+.|++++ -+-.+.+-|.=.......+..     ..  .
T Consensus       153 --~~---w~~~~~~~-----~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p-----~~--~  215 (400)
T COG4671         153 --AD---WRRAETVR-----LINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLP-----PH--E  215 (400)
T ss_pred             --cc---hhhhHHHH-----HHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCC-----Cc--C
Confidence              00   11111111     2235668888887766655555566542 223344444321000000000     00  0


Q ss_pred             CCCCcEEEEEeeccccccCHHH---HHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh---c---CCeEEcCCCChhHHHH
Q 044542          283 PANVSLVMGVAGRLVRDKGHPL---LYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL---G---QNVKVLGALEAHQLSE  353 (465)
Q Consensus       283 ~~~~~~~l~~~Grl~~~Kg~~~---ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l---~---~~V~~~g~v~~~~~~~  353 (465)
                      .+++..+++.+|.  ..-|-++   .++|...+..-.+ .-+++.|..-.++..+++   +   ++|.+..+.  +++..
T Consensus       216 ~pE~~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~--~~~~~  290 (400)
T COG4671         216 APEGFDILVSVGG--GADGAELIETALAAAQLLAGLNH-KWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFR--NDFES  290 (400)
T ss_pred             CCccceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhh--hhHHH
Confidence            0222366667774  3344433   3334333322211 236666753333333333   2   889999997  89999


Q ss_pred             HHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCccee-eeee------CCceEEeCC--CHHHHHHHHHHHHhC
Q 044542          354 FYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRT-VVVN------EELGYTFSP--NVKSFVEALELVIRD  424 (465)
Q Consensus       354 ~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e-~v~~------~~~G~l~~~--d~~~la~~i~~ll~~  424 (465)
                      +++.|+..|.-+    |+ ++++|-+++|||.+.-....-.+| .+..      |-..++.+.  +++.|+++|...+..
T Consensus       291 ll~gA~~vVSm~----GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~  365 (400)
T COG4671         291 LLAGARLVVSMG----GY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALAR  365 (400)
T ss_pred             HHHhhheeeecc----cc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccC
Confidence            999999999633    22 589999999999987665544332 1111      223444444  899999999999884

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=98.53  E-value=1.6e-06  Score=71.19  Aligned_cols=92  Identities=23%  Similarity=0.246  Sum_probs=57.3

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEee-cCCCccc---------c
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAA-NDHGSVN---------L  150 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~---------~  150 (465)
                      ||++++...         +.++.++++.|.+.|+||++++..... ...+...+. .+.... .....+.         .
T Consensus         1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~-~~~~~~~~i-~~~~~~~~~k~~~~~~~~~~l~k~   69 (139)
T PF13477_consen    1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDY-EKYEIIEGI-KVIRLPSPRKSPLNYIKYFRLRKI   69 (139)
T ss_pred             CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCc-hhhhHhCCe-EEEEecCCCCccHHHHHHHHHHHH
Confidence            688888752         457889999999999999999996543 111122222 222222 1111111         1


Q ss_pred             CCCCCCcEEEecCCc---hhHHhh---hc-CCcEEEEecch
Q 044542          151 NNDGAFDYVHTESVS---LPHWRA---KM-VPNVAVTWHGI  184 (465)
Q Consensus       151 ~~~~~~DiI~~~~~~---~~~~~~---~~-~p~~v~~~h~~  184 (465)
                      .++.+||+||+|...   +...++   .+ .| ++++.||.
T Consensus        70 ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~-~i~~~hg~  109 (139)
T PF13477_consen   70 IKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKK-VIYTVHGS  109 (139)
T ss_pred             hccCCCCEEEEecCChHHHHHHHHHHHcCCCC-EEEEecCC
Confidence            178899999999853   222222   23 55 99999985

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=98.48  E-value=2e-07  Score=84.17  Aligned_cols=43  Identities=26%  Similarity=0.402  Sum_probs=35.3

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      ||++++.++++-...||.+.++..|.++|+++||+|.|+++..
T Consensus         1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y   43 (245)
T PF08323_consen    1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKY   43 (245)
T ss_dssp             EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred             CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence            7999999987656999999999999999999999999999876

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PLN02448 UDP-glycosyltransferase family protein

Probab=98.48  E-value=0.00039  Score=69.06  Aligned_cols=127  Identities=16%  Similarity=0.095  Sum_probs=75.7

Q ss_pred             CcEEEEEeecccc--ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh-cCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          286 VSLVMGVAGRLVR--DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL-GQNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       286 ~~~~l~~~Grl~~--~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l-~~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      ++.+.+..|....  ..-+..++++++..     +..++++..++ ...+.+. .+++.+.+++|+.++   +...++..
T Consensus       274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~-~~~~~~~~~~~~~v~~w~pQ~~i---L~h~~v~~  344 (459)
T PLN02448        274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGE-ASRLKEICGDMGLVVPWCDQLKV---LCHSSVGG  344 (459)
T ss_pred             CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCc-hhhHhHhccCCEEEeccCCHHHH---hccCccce
Confidence            3466667787643  12244444455443     44566655433 1223332 368888999987764   55666633


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeC-CceEEeC-------C-CHHHHHHHHHHHHhC
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNE-ELGYTFS-------P-NVKSFVEALELVIRD  424 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~-------~-d~~~la~~i~~ll~~  424 (465)
                      +-++   |--++++||+.+|+|+|+-...+-..   ..+.+. +.|+-+.       . +.+++++++++++.+
T Consensus       345 fvtH---gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~  415 (459)
T PLN02448        345 FWTH---CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDL  415 (459)
T ss_pred             EEec---CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcC
Confidence            3332   22359999999999999976543210   122331 3455542       2 789999999999986

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.47  E-value=3.3e-05  Score=69.12  Aligned_cols=283  Identities=13%  Similarity=0.090  Sum_probs=161.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC-Ccc----------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH-GSV----------  148 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~----------  148 (465)
                      |||.+-..+-|       ...+...+...|.++||+|.+-|......... +...+.......... ...          
T Consensus         1 mkVwiDI~n~~-------hvhfFk~lI~elekkG~ev~iT~rd~~~v~~L-Ld~ygf~~~~Igk~g~~tl~~Kl~~~~eR   72 (346)
T COG1817           1 MKVWIDIGNPP-------HVHFFKNLIWELEKKGHEVLITCRDFGVVTEL-LDLYGFPYKSIGKHGGVTLKEKLLESAER   72 (346)
T ss_pred             CeEEEEcCCcc-------hhhHHHHHHHHHHhCCeEEEEEEeecCcHHHH-HHHhCCCeEeecccCCccHHHHHHHHHHH
Confidence            57777655422       35678999999999999998888766443222 122222222222111 111          


Q ss_pred             -----ccCCCCCCcEEEe-cCCchhHH-hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHH
Q 044542          149 -----NLNNDGAFDYVHT-ESVSLPHW-RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVD  221 (465)
Q Consensus       149 -----~~~~~~~~DiI~~-~~~~~~~~-~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (465)
                           ....+.+||+.+. |++.++.. ...++| .+.....-...                        .+        
T Consensus        73 ~~~L~ki~~~~kpdv~i~~~s~~l~rvafgLg~p-sIi~~D~ehA~------------------------~q--------  119 (346)
T COG1817          73 VYKLSKIIAEFKPDVAIGKHSPELPRVAFGLGIP-SIIFVDNEHAE------------------------AQ--------  119 (346)
T ss_pred             HHHHHHHHhhcCCceEeecCCcchhhHHhhcCCc-eEEecCChhHH------------------------HH--------
Confidence                 1117889999876 44433332 234556 44443321110                        00        


Q ss_pred             HHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCC----CCccCCcccCcccccccCCCCCCcEEEEEeec--
Q 044542          222 EIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDE----TKFVHDPEAGVRFPEKLGVPANVSLVMGVAGR--  295 (465)
Q Consensus       222 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~----~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Gr--  295 (465)
                      .+..+.-|+.++++.....+.+.. +|-.+.++. -+||+-.    ..|.|+    .++-+++|+..+.+++++=.=.  
T Consensus       120 nkl~~Pla~~ii~P~~~~~~~~~~-~G~~p~~i~-~~~giae~~~v~~f~pd----~evlkeLgl~~~~~yIVmRpe~~~  193 (346)
T COG1817         120 NKLTLPLADVIITPEAIDEEELLD-FGADPNKIS-GYNGIAELANVYGFVPD----PEVLKELGLEEGETYIVMRPEPWG  193 (346)
T ss_pred             hhcchhhhhheecccccchHHHHH-hCCCcccee-cccceeEEeecccCCCC----HHHHHHcCCCCCCceEEEeecccc
Confidence            113346678888887777777666 676555553 3455532    224343    4677889998876666542211  


Q ss_pred             ---cccccCHHHHHHHHHHhhhcCCCeEEEEEeCC-cchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCC
Q 044542          296 ---LVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG-PWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL  371 (465)
Q Consensus       296 ---l~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g-~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~  371 (465)
                         ...+++++.+.+++..+.+.+    .+++-.. ..++.+++. ++++.....  -+-.+++-.|++++-      +-
T Consensus       194 A~y~~g~~~~~~~~~li~~l~k~g----iV~ipr~~~~~eife~~-~n~i~pk~~--vD~l~Llyya~lvig------~g  260 (346)
T COG1817         194 AHYDNGDRGISVLPDLIKELKKYG----IVLIPREKEQAEIFEGY-RNIIIPKKA--VDTLSLLYYATLVIG------AG  260 (346)
T ss_pred             ceeeccccchhhHHHHHHHHHhCc----EEEecCchhHHHHHhhh-ccccCCccc--ccHHHHHhhhheeec------CC
Confidence               123566667788888886542    4444443 233333333 233222222  244457888888874      23


Q ss_pred             cHHHHHHHHcCCeEEecCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542          372 DLTLIEAMHCGRTVLTPNYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELVIRD  424 (465)
Q Consensus       372 ~~~~~EAma~G~PvI~s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~  424 (465)
                      |...-||...|+|.|++.-|-.-  ++.+  -+.|.++.. |+.+..+...+.+.+
T Consensus       261 gTMarEaAlLGtpaIs~~pGkll~vdk~l--ie~G~~~~s~~~~~~~~~a~~~l~~  314 (346)
T COG1817         261 GTMAREAALLGTPAISCYPGKLLAVDKYL--IEKGLLYHSTDEIAIVEYAVRNLKY  314 (346)
T ss_pred             chHHHHHHHhCCceEEecCCccccccHHH--HhcCceeecCCHHHHHHHHHHHhhc
Confidence            56789999999999998744111  1111  256888887 888877777777776

>PLN02208 glycosyltransferase family protein

Probab=98.41  E-value=0.0011  Score=65.28  Aligned_cols=224  Identities=11%  Similarity=-0.003  Sum_probs=113.5

Q ss_pred             hhcccCEEEEeChhHHH-HHHHHhCCC-CCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCH
Q 044542          225 FFSSYNQHICISNSAAE-VLVKIYQLP-QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGH  302 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~-~~~~~~~~~-~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~  302 (465)
                      .+.++|.+++.|-+..+ .+.+.+.-+ ..++..|..-..... .. .....++.+-+.-.+++..+.+.+|.... -..
T Consensus       190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~-~~-~~~~~~~~~wLd~~~~~sVvyvSfGS~~~-l~~  266 (442)
T PLN02208        190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD-TS-KPLEEQWSHFLSGFPPKSVVFCSLGSQII-LEK  266 (442)
T ss_pred             hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC-CC-CCCHHHHHHHHhcCCCCcEEEEecccccc-CCH
Confidence            45688999988854433 333333211 134555543321110 00 00011222222222333477778888753 244


Q ss_pred             HHHHHHHHHhhhcCCCeEEEEEeC-C--cc----hh-HHHHh-cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcH
Q 044542          303 PLLYEAFSSITRDHPGVYLLVAGT-G--PW----GR-RYAEL-GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDL  373 (465)
Q Consensus       303 ~~ll~a~~~l~~~~~~~~l~ivG~-g--~~----~~-~~~~l-~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~  373 (465)
                      +.+.+.+..+....-.+.+++--. +  ..    .+ ..++. +.++.+.+|+|+.+   +|+...+..+-|+.  | -+
T Consensus       267 ~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~---iL~H~~v~~FvtHc--G-~n  340 (442)
T PLN02208        267 DQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPL---ILDHPSIGCFVNHC--G-PG  340 (442)
T ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHH---HhcCCccCeEEccC--C-ch
Confidence            456666555422222343333311 1  11    11 11111 26888889998776   56667665554532  2 36


Q ss_pred             HHHHHHHcCCeEEecCCCCcce---eeeee-CCceEEeC------CCHHHHHHHHHHHHhCChHHHHHHHHHHHHH---H
Q 044542          374 TLIEAMHCGRTVLTPNYPSIVR---TVVVN-EELGYTFS------PNVKSFVEALELVIRDGPKVLQRKGLACKEH---A  440 (465)
Q Consensus       374 ~~~EAma~G~PvI~s~~gg~~~---e~v~~-~~~G~l~~------~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~---~  440 (465)
                      +++||+++|+|+|+-..-+-..   .++.+ -+.|+.+.      .+.+++.++|.+++.++.+..+++.+++++.   +
T Consensus       341 S~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~  420 (442)
T PLN02208        341 TIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEIL  420 (442)
T ss_pred             HHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence            9999999999999976532110   12222 34566663      2789999999999987323444444444333   3


Q ss_pred             HhhCCHHHHHHHHHHHH
Q 044542          441 LSMFTATKMASAYERFF  457 (465)
Q Consensus       441 ~~~fs~~~~~~~~~~~~  457 (465)
                      .+.=|..+..+++.+-+
T Consensus       421 ~~~gsS~~~l~~~v~~l  437 (442)
T PLN02208        421 VSPGLLTGYVDKFVEEL  437 (442)
T ss_pred             hcCCcHHHHHHHHHHHH
Confidence            23234444444444433

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.35  E-value=1.8e-05  Score=69.83  Aligned_cols=286  Identities=15%  Similarity=0.141  Sum_probs=142.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYV  159 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI  159 (465)
                      |||+|++...+  ...+|.-.+...|+++|.++|..+..++......-...............     -...++.++|++
T Consensus         1 M~V~i~~Dgg~--~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~~~f~~~~~~~-----~n~ik~~k~d~l   73 (318)
T COG3980           1 MKVLIRCDGGL--EIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVYEGFKVLEGRG-----NNLIKEEKFDLL   73 (318)
T ss_pred             CcEEEEecCCc--ccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhhhhccceeeec-----ccccccccCCEE
Confidence            89999998764  24467777899999999999988888887663221111100100000000     002358899999


Q ss_pred             EecCCchhHHhhhcC----CcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEe
Q 044542          160 HTESVSLPHWRAKMV----PNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICI  235 (465)
Q Consensus       160 ~~~~~~~~~~~~~~~----p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~  235 (465)
                      ++.++++..-..+.+    ...++.+.+....                       .              ++..|  ..+
T Consensus        74 I~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~-----------------------~--------------~~d~d--~iv  114 (318)
T COG3980          74 IFDSYGLNADDFKLIKEEAGSKILIFDDENAK-----------------------S--------------FKDND--LIV  114 (318)
T ss_pred             EEeccCCCHHHHHHHHHHhCCcEEEecCCCcc-----------------------c--------------hhhhH--hhh
Confidence            999876544322211    1123333332110                       0              00111  111


Q ss_pred             ChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhc
Q 044542          236 SNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRD  315 (465)
Q Consensus       236 S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~  315 (465)
                      .. ..... .+|+.-+.+..+ ..|++-....+.   -...|+..-..+.. -+++..|.- ..|+  ...+.++.+.+.
T Consensus       115 N~-~~~a~-~~y~~v~~k~~~-~lGp~y~~lr~e---F~~~r~~~~~r~~r-~ilI~lGGs-Dpk~--lt~kvl~~L~~~  184 (318)
T COG3980         115 NA-ILNAN-DYYGLVPNKTRY-YLGPGYAPLRPE---FYALREENTERPKR-DILITLGGS-DPKN--LTLKVLAELEQK  184 (318)
T ss_pred             hh-hhcch-hhccccCcceEE-EecCCceeccHH---HHHhHHHHhhcchh-eEEEEccCC-Chhh--hHHHHHHHhhcc
Confidence            11 11111 224444445433 334332111111   01111111111122 244466653 3455  356777777665


Q ss_pred             CCCeEEEEE-eCC-cchhHHHH-hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEe---
Q 044542          316 HPGVYLLVA-GTG-PWGRRYAE-LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLT---  387 (465)
Q Consensus       316 ~~~~~l~iv-G~g-~~~~~~~~-l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~---  387 (465)
                        ++.+.|+ |++ +..+.+++ ..  +++.+.-..  ++++.+++.||+.|..      -|.++.||...|+|.++   
T Consensus       185 --~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~--~dma~LMke~d~aI~A------aGstlyEa~~lgvP~l~l~~  254 (318)
T COG3980         185 --NVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDT--NDMAELMKEADLAISA------AGSTLYEALLLGVPSLVLPL  254 (318)
T ss_pred             --CeeEEEEecCCCcchhHHHHHHhhCCCeeeEecc--hhHHHHHHhcchheec------cchHHHHHHHhcCCceEEee
Confidence              3455544 432 22222222 22  777777665  7999999999999963      25699999999999332   


Q ss_pred             -cCCCCcceeee---eeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHH
Q 044542          388 -PNYPSIVRTVV---VNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGL  434 (465)
Q Consensus       388 -s~~gg~~~e~v---~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~  434 (465)
                       .+--....+.-   .....|+-.  ........+.++..| +..+..+..
T Consensus       255 a~NQ~~~a~~f~~lg~~~~l~~~l--~~~~~~~~~~~i~~d-~~~rk~l~~  302 (318)
T COG3980         255 AENQIATAKEFEALGIIKQLGYHL--KDLAKDYEILQIQKD-YARRKNLSF  302 (318)
T ss_pred             eccHHHHHHHHHhcCchhhccCCC--chHHHHHHHHHhhhC-HHHhhhhhh
Confidence             22111110000   001122222  345666677778787 555555443

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.35  E-value=0.00016  Score=66.28  Aligned_cols=261  Identities=12%  Similarity=0.089  Sum_probs=146.8

Q ss_pred             CCCCCcEEEecCCc-hhHHhh---hcC--CcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          152 NDGAFDYVHTESVS-LPHWRA---KMV--PNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       152 ~~~~~DiI~~~~~~-~~~~~~---~~~--p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                      +..+.+=+++|+.. ...|++   ..+  .+..|.+.|-       |++...        ..+...+...+.+     ..
T Consensus        75 ~~~r~~kff~HGqFn~~lwlaLl~g~~~~~k~~WhIWGa-------DLYe~~--------~~~k~rlfy~lRr-----~a  134 (360)
T PF07429_consen   75 KADRADKFFLHGQFNPWLWLALLFGKIKLKKCYWHIWGA-------DLYEDS--------RSLKFRLFYFLRR-----LA  134 (360)
T ss_pred             hhCccceEEEeccCcHHHHHHHHcCCccccceEEEEeCc-------hhhccc--------cccchhHHHHHHH-----HH
Confidence            45678888888742 222332   222  2366777763       333221        1111223333333     33


Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc-ccccCHHH
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL-VRDKGHPL  304 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl-~~~Kg~~~  304 (465)
                      .++..+|++ .+.....+++.++..+......|..+|..........          ..++++.| .+|+- ++..++..
T Consensus       135 q~rvg~V~a-t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~~----------~~~~~ltI-LvGNSgd~sNnHie  202 (360)
T PF07429_consen  135 QKRVGHVFA-TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKNK----------KNKGKLTI-LVGNSGDPSNNHIE  202 (360)
T ss_pred             HhhcCeEEE-EcchHHHHHHHcCCCCceEEEcCCCCchhhhcccccc----------CCCCceEE-EEcCCCCCCccHHH
Confidence            466777766 5677788888886444444444444443321111110          11233666 35554 55667766


Q ss_pred             HHHHHHHhhhcCCCeEEEE-EeCCc-chhHH---HH----h-c-CCeEE-cCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          305 LYEAFSSITRDHPGVYLLV-AGTGP-WGRRY---AE----L-G-QNVKV-LGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       305 ll~a~~~l~~~~~~~~l~i-vG~g~-~~~~~---~~----l-~-~~V~~-~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      +++++++..  +.++++++ .|-|. .+++.   ++    + + +++.. ..++|.+|..++++.||+.++...+-+|.|
T Consensus       203 aL~~L~~~~--~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiG  280 (360)
T PF07429_consen  203 ALEALKQQF--GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIG  280 (360)
T ss_pred             HHHHHHHhc--CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHh
Confidence            666665532  34677665 35443 23333   22    2 2 57765 579999999999999999999987778888


Q ss_pred             HHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHH
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKM  449 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  449 (465)
                      +.++ .+.+|+||+.++....- ..+.+...-+++..   |...+.++=+++..-+.           +.  -.|...+.
T Consensus       281 nI~l-Ll~~G~~v~L~~~np~~-~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~dk-----------~~--iaFf~pny  345 (360)
T PF07429_consen  281 NICL-LLQLGKKVFLSRDNPFW-QDLKEQGIPVLFYGDELDEALVREAQRQLANVDK-----------QQ--IAFFAPNY  345 (360)
T ss_pred             HHHH-HHHcCCeEEEecCChHH-HHHHhCCCeEEeccccCCHHHHHHHHHHHhhCcc-----------cc--eeeeCCch
Confidence            7666 99999999988766655 33333434455542   55555555444443311           11  12555666


Q ss_pred             HHHHHHHHHHhc
Q 044542          450 ASAYERFFLRMK  461 (465)
Q Consensus       450 ~~~~~~~~~~~~  461 (465)
                      .+.|.+.+.-..
T Consensus       346 ~~~w~~~l~~~~  357 (360)
T PF07429_consen  346 LQGWRQALRLAA  357 (360)
T ss_pred             HHHHHHHHHHHh
Confidence            666666665443

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=98.33  E-value=5.6e-06  Score=77.07  Aligned_cols=106  Identities=15%  Similarity=0.133  Sum_probs=78.1

Q ss_pred             hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcc---eeeeeeC-CceEEe-C-----C--CHHHHHH
Q 044542          349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIV---RTVVVNE-ELGYTF-S-----P--NVKSFVE  416 (465)
Q Consensus       349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~---~e~v~~~-~~G~l~-~-----~--d~~~la~  416 (465)
                      -+..++.+.|.+.|+||++ |++|.+..|.-.+|+|-|+|+..|..   +|.+.+. ..|+.+ +     +  ++++|++
T Consensus       492 lDYeeFVRGCHLGVFPSYY-EPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~  570 (692)
T KOG3742|consen  492 LDYEEFVRGCHLGVFPSYY-EPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLAS  570 (692)
T ss_pred             CCHHHHhcccccccccccc-CCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHH
Confidence            4678899999999999987 99999999999999999999987653   2444433 345543 2     2  6788888


Q ss_pred             HHHHHHhCChHHHHHHHHH-HHHHHHhhCCHHHHHHHHHHHH
Q 044542          417 ALELVIRDGPKVLQRKGLA-CKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       417 ~i~~ll~~~~~~~~~~~~~-~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      -|..+...  .+++++.++ --++...-.+|..+...|.+.=
T Consensus       571 ~m~~F~~q--sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR  610 (692)
T KOG3742|consen  571 FMYEFCKQ--SRRQRIIQRNRTERLSDLLDWKYLGRYYRKAR  610 (692)
T ss_pred             HHHHHHHH--HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHH
Confidence            88888876  345555543 3455556678998888776643

>PLN03007 UDP-glucosyltransferase family protein

Probab=98.29  E-value=0.0057  Score=61.27  Aligned_cols=116  Identities=12%  Similarity=-0.022  Sum_probs=68.2

Q ss_pred             cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeee-CCceEEe-----
Q 044542          337 GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVN-EELGYTF-----  407 (465)
Q Consensus       337 ~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~-~~~G~l~-----  407 (465)
                      +.++++.+++|+.   ++|..+++..+-++.  | -++++||+.+|+|+|+-...+-..   ..+.+ -+.|+-+     
T Consensus       344 ~~g~~v~~w~PQ~---~iL~h~~v~~fvtH~--G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~  417 (482)
T PLN03007        344 GKGLIIRGWAPQV---LILDHQATGGFVTHC--G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKL  417 (482)
T ss_pred             cCCEEEecCCCHH---HHhccCccceeeecC--c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccc
Confidence            3788999999865   467777774443432  3 359999999999999976533210   11111 1223222     


Q ss_pred             -----CC-CHHHHHHHHHHHHhCC-----hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          408 -----SP-NVKSFVEALELVIRDG-----PKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       408 -----~~-d~~~la~~i~~ll~~~-----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                           .. +.+++.+++++++.++     ++..+++++.+++.+.+.=|..+..+++.+.+.
T Consensus       418 ~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~  479 (482)
T PLN03007        418 VKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELN  479 (482)
T ss_pred             cccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence                 23 8899999999999872     122334455555555543333344444444443

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=98.26  E-value=0.0048  Score=60.93  Aligned_cols=131  Identities=12%  Similarity=0.097  Sum_probs=76.5

Q ss_pred             CcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCC-----cc----h-hHHHHhcCCeEEcCCCChhHHHHHH
Q 044542          286 VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG-----PW----G-RRYAELGQNVKVLGALEAHQLSEFY  355 (465)
Q Consensus       286 ~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g-----~~----~-~~~~~l~~~V~~~g~v~~~~~~~~~  355 (465)
                      +..+.+.+|.... -..+.+.+.+.-|......+ +.++..+     ..    . ...++..++..+.+++|+.+   ++
T Consensus       264 ~sVvyvsfGS~~~-~~~~q~~ela~gLe~s~~~F-lWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~---iL  338 (451)
T PLN02410        264 NSVIFVSLGSLAL-MEINEVMETASGLDSSNQQF-LWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKE---VL  338 (451)
T ss_pred             CcEEEEEcccccc-CCHHHHHHHHHHHHhcCCCe-EEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHH---Hh
Confidence            3477778888753 22334444444443332222 3333321     11    1 22333447888889998777   55


Q ss_pred             HhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeC-CceEEeCC--CHHHHHHHHHHHHhC
Q 044542          356 NALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNE-ELGYTFSP--NVKSFVEALELVIRD  424 (465)
Q Consensus       356 ~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~~--d~~~la~~i~~ll~~  424 (465)
                      ...++..+-++.  |+ ++++||+++|+|+|+-...+-..   ..+.+. +.|+-+..  +.+++++++++++.+
T Consensus       339 ~h~~v~~fvtH~--G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~  410 (451)
T PLN02410        339 SHPAVGGFWSHC--GW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMVE  410 (451)
T ss_pred             CCCccCeeeecC--ch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcC
Confidence            555553332322  32 58999999999999876533210   122322 56776643  899999999999977

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.16  E-value=2.5e-05  Score=73.83  Aligned_cols=131  Identities=8%  Similarity=0.005  Sum_probs=80.2

Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecccc--ccCHH
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVR--DKGHP  303 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~--~Kg~~  303 (465)
                      -+.+|++.+.=+...+.+    |   .++.++.|++-.. .....       +.  ++++ +.+.++.|+-..  .+-+.
T Consensus       125 ~k~~d~vl~ifPFE~~~y----g---~~~~~VGhPl~d~-~~~~~-------~~--~~~~-~~I~llPGSR~~Ei~~llP  186 (347)
T PRK14089        125 EKYCDFLASILPFEVQFY----Q---SKATYVGHPLLDE-IKEFK-------KD--LDKE-GTIAFMPGSRKSEIKRLMP  186 (347)
T ss_pred             HHHHhhhhccCCCCHHHh----C---CCCEEECCcHHHh-hhhhh-------hh--cCCC-CEEEEECCCCHHHHHHHHH
Confidence            356677777666555554    4   3456788875322 11111       11  1222 466667776532  35556


Q ss_pred             HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc---CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHH
Q 044542          304 LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG---QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMH  380 (465)
Q Consensus       304 ~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma  380 (465)
                      .+++++.++.++.  ..+++.|.... +.+++..   ..+.+.+     +..+++++||+.+..|      |++.+|++.
T Consensus       187 ~~~~aa~~L~~~~--~~~~i~~a~~~-~~i~~~~~~~~~~~~~~-----~~~~~m~~aDlal~~S------GT~TLE~al  252 (347)
T PRK14089        187 IFKELAKKLEGKE--KILVVPSFFKG-KDLKEIYGDISEFEISY-----DTHKALLEAEFAFICS------GTATLEAAL  252 (347)
T ss_pred             HHHHHHHHHhhcC--cEEEEeCCCcH-HHHHHHHhcCCCcEEec-----cHHHHHHhhhHHHhcC------cHHHHHHHH
Confidence            7779999988753  67888876543 4444422   2334332     4568999999999754      457889999


Q ss_pred             cCCeEEec
Q 044542          381 CGRTVLTP  388 (465)
Q Consensus       381 ~G~PvI~s  388 (465)
                      +|+|.|..
T Consensus       253 ~g~P~Vv~  260 (347)
T PRK14089        253 IGTPFVLA  260 (347)
T ss_pred             hCCCEEEE
Confidence            99999863

>PLN02210 UDP-glucosyl transferase

Probab=98.10  E-value=0.013  Score=58.05  Aligned_cols=161  Identities=12%  Similarity=0.032  Sum_probs=90.6

Q ss_pred             CcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEE-EeCCc---chhHHHHh--cCCeEEcCCCChhHHHHHHHhcC
Q 044542          286 VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLV-AGTGP---WGRRYAEL--GQNVKVLGALEAHQLSEFYNALD  359 (465)
Q Consensus       286 ~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~---~~~~~~~l--~~~V~~~g~v~~~~~~~~~~~aD  359 (465)
                      ++.+.+.+|..... ..+.+-+.+..+...+  ..+++ ++...   ..+.+++.  .++..+.+++|+.+   +++.++
T Consensus       269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~~--~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~---iL~h~~  342 (456)
T PLN02210        269 SSVVYISFGSMLES-LENQVETIAKALKNRG--VPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEK---ILSHMA  342 (456)
T ss_pred             CceEEEEecccccC-CHHHHHHHHHHHHhCC--CCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHH---HhcCcC
Confidence            34666678886532 2333444444444332  23333 44221   12223332  25556789998765   677777


Q ss_pred             eEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeee-CCceEEeC------C-CHHHHHHHHHHHHhCCh--
Q 044542          360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVN-EELGYTFS------P-NVKSFVEALELVIRDGP--  426 (465)
Q Consensus       360 v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~-~~~G~l~~------~-d~~~la~~i~~ll~~~~--  426 (465)
                      +..+-++.  |+ ++++||+.+|+|+|+-...+-..   ..+.+ -+.|+.+.      . +.+++++++++++.++.  
T Consensus       343 vg~FitH~--G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~  419 (456)
T PLN02210        343 ISCFVTHC--GW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAA  419 (456)
T ss_pred             cCeEEeeC--Cc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHH
Confidence            44443432  32 48999999999999976543210   12333 35676663      3 78999999999997621  


Q ss_pred             ---HHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542          427 ---KVLQRKGLACKEHALSMFTATKMASAYER  455 (465)
Q Consensus       427 ---~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  455 (465)
                         +..+++++.+++.+.+.=|..+..+.+.+
T Consensus       420 ~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~  451 (456)
T PLN02210        420 DIRRRAAELKHVARLALAPGGSSARNLDLFIS  451 (456)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence               23345566666666665455444444433

>PLN00414 glycosyltransferase family protein

Probab=97.95  E-value=0.025  Score=55.83  Aligned_cols=207  Identities=12%  Similarity=0.011  Sum_probs=106.2

Q ss_pred             HhhcccCEEEEeChhHHH-HHHHHhCCC-CCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          224 RFFSSYNQHICISNSAAE-VLVKIYQLP-QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~-~~~~~~~~~-~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      ..+.+++.+++.|-...| .+.+.+.-. ..++.-|.+-+....-..........-+-+.-.+.++.+.+.+|..... .
T Consensus       188 ~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~-~  266 (446)
T PLN00414        188 KGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFF-E  266 (446)
T ss_pred             HhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccC-C
Confidence            345678999888854333 333333110 1245545443321100000000011112222233445777788887543 2


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEe---CCc----chhHH-HHhc-CCeEEcCCCChhHHHHHHHhc--CeEEecccCCCC
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAG---TGP----WGRRY-AELG-QNVKVLGALEAHQLSEFYNAL--DVFVNPTLRPQG  370 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG---~g~----~~~~~-~~l~-~~V~~~g~v~~~~~~~~~~~a--Dv~v~ps~~~eg  370 (465)
                      .+.+.+....|...+.++-.++..   .+.    ..+.+ ++.+ ....+.|++|+.+   ++...  +++|.  +.  |
T Consensus       267 ~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~---vL~h~~v~~fvt--H~--G  339 (446)
T PLN00414        267 KDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPL---ILSHPSVGCFVN--HC--G  339 (446)
T ss_pred             HHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHH---HhcCCccceEEe--cC--c
Confidence            345666666555544444333332   111    11112 2222 4566679998776   45555  44554  22  2


Q ss_pred             CcHHHHHHHHcCCeEEecCCCCcce---eee-eeCCceEEeC-----C-CHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542          371 LDLTLIEAMHCGRTVLTPNYPSIVR---TVV-VNEELGYTFS-----P-NVKSFVEALELVIRDGPKVLQRKGLACKEH  439 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s~~gg~~~---e~v-~~~~~G~l~~-----~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~  439 (465)
                       -++++||+.+|+|+|+-...+-..   ..+ ..-+.|+.+.     . +.+++.+++++++.++.+..+++.+++++.
T Consensus       340 -~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~  417 (446)
T PLN00414        340 -FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL  417 (446)
T ss_pred             -hhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence             369999999999999976432110   122 2345666662     2 889999999999987434445555554443

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=97.94  E-value=0.00016  Score=70.42  Aligned_cols=181  Identities=18%  Similarity=0.263  Sum_probs=128.0

Q ss_pred             ccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEE-----eCCcchhHHHHhc---CCeEEcCCC
Q 044542          275 RFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVA-----GTGPWGRRYAELG---QNVKVLGAL  346 (465)
Q Consensus       275 ~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-----G~g~~~~~~~~l~---~~V~~~g~v  346 (465)
                      ..|..+|+|++. ++++.+..+  .|=-...++.+..+.+..|+-.|.+.     |+...+.+.++++   ++|.|..-.
T Consensus       748 P~r~~y~Lp~d~-vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va  824 (966)
T KOG4626|consen  748 PTRSQYGLPEDA-VVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVA  824 (966)
T ss_pred             CCCCCCCCCCCe-EEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeecccc
Confidence            478899999886 666555544  45445678888888888888766664     4444455666666   899999988


Q ss_pred             ChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce----eeeeeCCceEEeCCCHHHHHHHHHHHH
Q 044542          347 EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR----TVVVNEELGYTFSPNVKSFVEALELVI  422 (465)
Q Consensus       347 ~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~----e~v~~~~~G~l~~~d~~~la~~i~~ll  422 (465)
                      ..+|-..-.+-+||.+-+-.+ .| -.+-+|.+.+|+|+|+-....++.    ..+..-+.|-++..+.++..+.-.++.
T Consensus       825 ~k~eHvrr~~LaDv~LDTplc-nG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~La  902 (966)
T KOG4626|consen  825 AKEEHVRRGQLADVCLDTPLC-NG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIAVRLA  902 (966)
T ss_pred             chHHHHHhhhhhhhcccCcCc-CC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHhh
Confidence            788888889999999986554 22 246789999999999865433321    112223445555558889998888898


Q ss_pred             hCChHHHHHHHHHHHHHHHh--hCCHHHHHHHHHHHHHHhc
Q 044542          423 RDGPKVLQRKGLACKEHALS--MFTATKMASAYERFFLRMK  461 (465)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~  461 (465)
                      .| .+.++.+..+-+.....  -|+-...+..++++|.++-
T Consensus       903 td-~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW  942 (966)
T KOG4626|consen  903 TD-KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMW  942 (966)
T ss_pred             cC-HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHH
Confidence            88 77888777765554332  4788888888888887653

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes

Probab=97.94  E-value=0.00039  Score=63.38  Aligned_cols=163  Identities=12%  Similarity=0.106  Sum_probs=102.2

Q ss_pred             eeEEEEeC-CCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC--CCCCcccCCcceEEEeecCCCcc------cc
Q 044542           80 LKLAVFSK-TWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR--KPHNDVHQGNLHVHFAANDHGSV------NL  150 (465)
Q Consensus        80 mkIl~v~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~------~~  150 (465)
                      |+|++++. .||.  ..||.+..+.+|++.|.+.-+.|..++.....  ....++..+...++.++......      ..
T Consensus         1 ~~V~ll~EGtYPy--v~GGVSsW~~~LI~glpe~~F~v~~i~a~~~~~~~~~y~lP~NV~~v~~v~L~~~~~~~~~~~~~   78 (268)
T PF11997_consen    1 MDVCLLTEGTYPY--VRGGVSSWVHQLIRGLPEHEFHVYAIGANPEDYGEPRYELPENVVEVREVPLWGEEDGSPFPRRR   78 (268)
T ss_pred             CeEEEEecCcCCC--CCCchhHHHHHHHhcCCCceEEEEEEeCCccccCCCcccCCCCcceEEEEECCCccccccccccc
Confidence            79999996 6774  88999999999999999977777777777544  33446666766665554322110      00


Q ss_pred             C-------------------------------------------------------------------------------
Q 044542          151 N-------------------------------------------------------------------------------  151 (465)
Q Consensus       151 ~-------------------------------------------------------------------------------  151 (465)
                      .                                                                               
T Consensus        79 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~w~~~~~~~~~~~~~~sf~d~fw~~r~~  158 (268)
T PF11997_consen   79 RGRRRFFDLLEELHEALRDPVPGDEEDWDEALYGLAEYARRYDLEDFLRSEEFWDALTEAYREYYPDPSFTDYFWTIRSM  158 (268)
T ss_pred             hhhhhHHHHHHHHHHHHHcccccchhHHHHHHHHHHhhccCCCHHHHHCCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            0                                                                               


Q ss_pred             ----------CCCCCcEEEecCCchhHHh------hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542          152 ----------NDGAFDYVHTESVSLPHWR------AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA  215 (465)
Q Consensus       152 ----------~~~~~DiI~~~~~~~~~~~------~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (465)
                                .-.+.|++|+.+.+.+..+      ..+.| ++++-||+.......++...-.-   .....++..+...
T Consensus       159 ~~~l~~ll~~~lP~advyHsvstGyAgl~g~~~k~~~g~P-~lLTEHGIY~RER~~ei~~a~w~---~~~~~~r~~wi~~  234 (268)
T PF11997_consen  159 HLPLFPLLAEPLPKADVYHSVSTGYAGLLGALAKYRYGRP-FLLTEHGIYTREREIEILQADWI---WESPYVRDLWIRF  234 (268)
T ss_pred             HHHHHHHhcccCCCCCEEecCCccHHHHHHHHHHHHhCCC-EEEecCCccHHHHHHHHHhcccc---cchHHHHHHHHHH
Confidence                      4457799999887544333      23678 99999998765433333221100   0012223333344


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCC
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQ  251 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~  251 (465)
                      +..+..  ..++.||.|+++.+..+++-.+ +|.++
T Consensus       235 f~~l~~--~~Y~~Ad~I~~l~~~n~~~q~~-~Ga~~  267 (268)
T PF11997_consen  235 FESLSR--LAYRAADRITPLYEYNREWQIE-LGADP  267 (268)
T ss_pred             HHHHHH--HHHHhhCeecccchhhHHHHHH-hCCCC
Confidence            443333  6689999999999975555444 67554

It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.75  E-value=7.8e-07  Score=75.63  Aligned_cols=107  Identities=21%  Similarity=0.351  Sum_probs=67.0

Q ss_pred             EEEEeCCcchhHHHHh---cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce--
Q 044542          321 LLVAGTGPWGRRYAEL---GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR--  395 (465)
Q Consensus       321 l~ivG~g~~~~~~~~l---~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~--  395 (465)
                      +++.|.....+...+.   ..+|.+.+++  +++.++++.||++|.   +  +-+.++.|++++|+|.|.-..++..+  
T Consensus        35 iv~~G~~~~~~~~~~~~~~~~~v~~~~~~--~~m~~~m~~aDlvIs---~--aG~~Ti~E~l~~g~P~I~ip~~~~~~~~  107 (167)
T PF04101_consen   35 IVQTGKNNYEELKIKVENFNPNVKVFGFV--DNMAELMAAADLVIS---H--AGAGTIAEALALGKPAIVIPLPGAADNH  107 (167)
T ss_dssp             CCCCTTCECHHHCCCHCCTTCCCEEECSS--SSHHHHHHHHSEEEE---C--S-CHHHHHHHHCT--EEEE--TTT-T-C
T ss_pred             EEEECCCcHHHHHHHHhccCCcEEEEech--hhHHHHHHHcCEEEe---C--CCccHHHHHHHcCCCeeccCCCCcchHH
Confidence            4455655333322222   2689999998  579999999999986   2  22469999999999999876665210  


Q ss_pred             -----eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHH
Q 044542          396 -----TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLA  435 (465)
Q Consensus       396 -----e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~  435 (465)
                           ..+.+...|..+..   +++.|.++|.+++.+ +....++.++
T Consensus       108 q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~-~~~~~~~~~~  154 (167)
T PF04101_consen  108 QEENAKELAKKGAAIMLDESELNPEELAEAIEELLSD-PEKLKEMAKA  154 (167)
T ss_dssp             HHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCC-HH-SHHHCCC
T ss_pred             HHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcC-cHHHHHHHHH
Confidence                 11223334444443   578899999999998 6655555444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PLN02173 UDP-glucosyl transferase family protein

Probab=97.60  E-value=0.089  Score=51.94  Aligned_cols=130  Identities=12%  Similarity=-0.001  Sum_probs=75.1

Q ss_pred             CcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeC-Cc-c-hhHHHHh-cCCeEEcCCCChhHHHHHHHhcCeE
Q 044542          286 VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGT-GP-W-GRRYAEL-GQNVKVLGALEAHQLSEFYNALDVF  361 (465)
Q Consensus       286 ~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~-g~-~-~~~~~~l-~~~V~~~g~v~~~~~~~~~~~aDv~  361 (465)
                      ++.+.+.+|.... -..+.+.+.+.-| .. .++-.++-.+ .. . +...++. ++++.+.+++|+.+   +++..++.
T Consensus       264 ~svvyvsfGS~~~-~~~~~~~ela~gL-s~-~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~---iL~H~~v~  337 (449)
T PLN02173        264 GSVVYIAFGSMAK-LSSEQMEEIASAI-SN-FSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQ---VLSNKAIG  337 (449)
T ss_pred             CceEEEEeccccc-CCHHHHHHHHHHh-cC-CCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHH---HhCCCccc
Confidence            3467777887643 2333444444444 22 2333333211 11 1 1223333 47899999998665   66777755


Q ss_pred             EecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeC-CceEEeC------C-CHHHHHHHHHHHHhC
Q 044542          362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNE-ELGYTFS------P-NVKSFVEALELVIRD  424 (465)
Q Consensus       362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~------~-d~~~la~~i~~ll~~  424 (465)
                      .+-++.   -.++++||+++|+|+|+-..-+-..   ..+.+. +.|+-+.      . +.+++++++.+++.+
T Consensus       338 ~FvtHc---GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~  408 (449)
T PLN02173        338 CFMTHC---GWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEG  408 (449)
T ss_pred             eEEecC---ccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcC
Confidence            554532   2369999999999999976432110   123322 3455442      1 679999999999976

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=97.51  E-value=0.0043  Score=59.16  Aligned_cols=105  Identities=12%  Similarity=0.105  Sum_probs=72.3

Q ss_pred             cccccCCCCCCcEEEEEeecc-ccccCHH--HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc----CC-eEEcCCCC
Q 044542          276 FPEKLGVPANVSLVMGVAGRL-VRDKGHP--LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG----QN-VKVLGALE  347 (465)
Q Consensus       276 ~r~~~g~~~~~~~~l~~~Grl-~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~----~~-V~~~g~v~  347 (465)
                      +..+++++.+++++++..|.- .+.|...  .+.+.+..+.++  +.++++.|...+.+..+++.    +. +.+.|..+
T Consensus       164 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~s  241 (334)
T TIGR02195       164 ALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETS  241 (334)
T ss_pred             HHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCC
Confidence            344556655556777777763 4566544  777777777653  47788999766655544443    33 34678888


Q ss_pred             hhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          348 AHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       348 ~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      -.++..+++.||++|-.    ++-  .+==|.|.|+|+|+-
T Consensus       242 L~el~ali~~a~l~I~~----DSG--p~HlAaA~~~P~i~l  276 (334)
T TIGR02195       242 LDEAVDLIALAKAVVTN----DSG--LMHVAAALNRPLVAL  276 (334)
T ss_pred             HHHHHHHHHhCCEEEee----CCH--HHHHHHHcCCCEEEE
Confidence            89999999999999974    222  444588999999974

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PLN02207 UDP-glycosyltransferase

Probab=97.47  E-value=0.021  Score=56.59  Aligned_cols=225  Identities=12%  Similarity=0.008  Sum_probs=113.6

Q ss_pred             HhhcccCEEEEeChhHHHH-HHHHhCC-C-CCCEEEecCCCCCCCccCCc----ccCcccccccCCCCCCcEEEEEeecc
Q 044542          224 RFFSSYNQHICISNSAAEV-LVKIYQL-P-QRNVHVILNGVDETKFVHDP----EAGVRFPEKLGVPANVSLVMGVAGRL  296 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~-~~~~~~~-~-~~ki~vi~ngvd~~~~~~~~----~~~~~~r~~~g~~~~~~~~l~~~Grl  296 (465)
                      ..+++++.+++.|....+. ..+.+.- + ..++.-|..-..... .+.+    ....++.+-+.-.+.+..+.+.+|..
T Consensus       207 ~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~-~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~  285 (468)
T PLN02207        207 ILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKA-QPHPEQDLARRDELMKWLDDQPEASVVFLCFGSM  285 (468)
T ss_pred             HhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCccccc-CCCCccccchhhHHHHHHhcCCCCcEEEEEeccC
Confidence            3467899999999776664 3332310 1 124444433221110 0000    00011222222222334666678876


Q ss_pred             cc--ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcc-------hhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccC
Q 044542          297 VR--DKGHPLLYEAFSSITRDHPGVYLLVAGTGPW-------GRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR  367 (465)
Q Consensus       297 ~~--~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-------~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~  367 (465)
                      ..  .+-++.+..+++.+    +.--+..+.+...       ....++..+++.+.+|+|+.++   ++...+..+-++.
T Consensus       286 ~~~~~~q~~ela~~l~~~----~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~I---L~H~~vg~FvTH~  358 (468)
T PLN02207        286 GRLRGPLVKEIAHGLELC----QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEI---LAHKAVGGFVSHC  358 (468)
T ss_pred             cCCCHHHHHHHHHHHHHC----CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHH---hcccccceeeecC
Confidence            42  23344555555554    2212333442111       1222334577888899987775   4444443333322


Q ss_pred             CCCCcHHHHHHHHcCCeEEecCCCCcce---eeeee-CCceEEe---------CC-CHHHHHHHHHHHHhC-ChH---HH
Q 044542          368 PQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVN-EELGYTF---------SP-NVKSFVEALELVIRD-GPK---VL  429 (465)
Q Consensus       368 ~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~-~~~G~l~---------~~-d~~~la~~i~~ll~~-~~~---~~  429 (465)
                        |+ ++++||+.+|+|+|+-...+-..   ..+.+ -+.|+-+         .. +.+++.++|.+++.+ .++   ..
T Consensus       359 --Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a  435 (468)
T PLN02207        359 --GW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRV  435 (468)
T ss_pred             --cc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHH
Confidence              32 48899999999999976543210   11222 3445422         13 789999999999962 122   23


Q ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          430 QRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       430 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      +++++.+++.+.+-=|..+..+++.+-+..
T Consensus       436 ~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~  465 (468)
T PLN02207        436 MDISQMIQRATKNGGSSFAAIEKFIHDVIG  465 (468)
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence            344455555555544555555555554443

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=97.46  E-value=0.0074  Score=57.45  Aligned_cols=96  Identities=15%  Similarity=0.141  Sum_probs=70.6

Q ss_pred             CcEEEEEee-ccccccCHH--HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc----CCeEEcCCCChhHHHHHHHhc
Q 044542          286 VSLVMGVAG-RLVRDKGHP--LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG----QNVKVLGALEAHQLSEFYNAL  358 (465)
Q Consensus       286 ~~~~l~~~G-rl~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~----~~V~~~g~v~~~~~~~~~~~a  358 (465)
                      ++++++..| .-...|...  .+.+.+..+.+++  .++++.|+..+.+..+++.    ..+.+.|..+-+++..+++.|
T Consensus       175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a  252 (334)
T COG0859         175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGA  252 (334)
T ss_pred             CCeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcC
Confidence            357777888 655677654  6777778887765  7889999876555555554    233389999999999999999


Q ss_pred             CeEEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542          359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN  389 (465)
Q Consensus       359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~  389 (465)
                      |++|-+..   |   .+-=|.|.|+|+|+--
T Consensus       253 ~l~I~~DS---g---~~HlAaA~~~P~I~iy  277 (334)
T COG0859         253 DLVIGNDS---G---PMHLAAALGTPTIALY  277 (334)
T ss_pred             CEEEccCC---h---HHHHHHHcCCCEEEEE
Confidence            99987531   2   4445899999999843

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.44  E-value=0.16  Score=50.75  Aligned_cols=114  Identities=8%  Similarity=0.081  Sum_probs=67.4

Q ss_pred             CCeEEcCCCChhHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeee-eCCceEEeC---
Q 044542          338 QNVKVLGALEAHQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVV-NEELGYTFS---  408 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~-~~~~G~l~~---  408 (465)
                      .++++.+++|+.+   ++..  .+++|.  +  -| -++++||+++|+|+|+-...+-..   ..+. .-+.|+.+.   
T Consensus       343 ~g~~v~~w~PQ~~---vL~h~~v~~fvt--H--~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~  414 (477)
T PLN02863        343 RGLVIRGWAPQVA---ILSHRAVGAFLT--H--CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA  414 (477)
T ss_pred             CCEEecCCCCHHH---HhcCCCcCeEEe--c--CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC
Confidence            5788889998655   5555  455554  2  23 358999999999999866533110   1222 225566551   


Q ss_pred             --C-CHHHHHHHHHHHHhCChHH---HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          409 --P-NVKSFVEALELVIRDGPKV---LQRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       409 --~-d~~~la~~i~~ll~~~~~~---~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                        . +.+++.+++.+++..+++.   .+++++.+++.+.+.=|..+..+++.+.+.+
T Consensus       415 ~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~  471 (477)
T PLN02863        415 DTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVE  471 (477)
T ss_pred             CCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHH
Confidence              2 6789999999988432332   2334444555554433455555555555443

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.38  E-value=0.00089  Score=67.78  Aligned_cols=130  Identities=18%  Similarity=0.152  Sum_probs=78.4

Q ss_pred             CCcEEEEEeeccccc---cCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeE
Q 044542          285 NVSLVMGVAGRLVRD---KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVF  361 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~---Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~  361 (465)
                      +++.+++..|.....   +-.+.+++|++.+    |+ ++++.-++..   ...+.+|+.+..|+|+.+   +++...+-
T Consensus       275 ~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~---~~~l~~n~~~~~W~PQ~~---lL~hp~v~  343 (500)
T PF00201_consen  275 KKGVVYVSFGSIVSSMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP---PENLPKNVLIVKWLPQND---LLAHPRVK  343 (500)
T ss_dssp             TTEEEEEE-TSSSTT-HHHHHHHHHHHHHCS----TT-EEEEEETCSH---GCHHHTTEEEESS--HHH---HHTSTTEE
T ss_pred             CCCEEEEecCcccchhHHHHHHHHHHHHhhC----CC-cccccccccc---cccccceEEEeccccchh---hhhcccce
Confidence            344777788887531   1133445555554    55 5666554422   234458999999998754   46555554


Q ss_pred             EecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHH
Q 044542          362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVL  429 (465)
Q Consensus       362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~  429 (465)
                      ++=+ +  |--+++.||+.+|+|+|+-..-+--.   ..+++.+.|..++.   +.+++.++|.+++.| +...
T Consensus       344 ~fit-H--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~-~~y~  413 (500)
T PF00201_consen  344 LFIT-H--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLEN-PSYK  413 (500)
T ss_dssp             EEEE-S----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHS-HHHH
T ss_pred             eeee-c--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhh-hHHH
Confidence            4434 2  33579999999999999976543210   23555667888874   789999999999998 5443

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=97.30  E-value=0.0018  Score=54.24  Aligned_cols=40  Identities=15%  Similarity=0.277  Sum_probs=34.4

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCc
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKF  266 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~  266 (465)
                      ..+..+|..+++|.+.+..+-..+.   +|+.||+-|||++.+
T Consensus       131 ~~l~~~D~~isPT~wQ~~~fP~~~r---~kI~VihdGiDt~~~  170 (171)
T PF12000_consen  131 LALEQADAGISPTRWQRSQFPAEFR---SKISVIHDGIDTDRF  170 (171)
T ss_pred             HHHHhCCcCcCCCHHHHHhCCHHHH---cCcEEeecccchhhc
Confidence            5578899999999999998887653   899999999998754

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PLN02670 transferase, transferring glycosyl groups

Probab=97.20  E-value=0.014  Score=57.76  Aligned_cols=117  Identities=13%  Similarity=0.125  Sum_probs=75.5

Q ss_pred             CeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeCCceEEeC------C
Q 044542          339 NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNEELGYTFS------P  409 (465)
Q Consensus       339 ~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~~~G~l~~------~  409 (465)
                      .+.+.+|+|+.+   +++..++..+-++.  | -++++||+++|+|+|+-...+-..   ..+.+.+.|+.+.      .
T Consensus       340 G~vv~~W~PQ~~---IL~H~~v~~FvtHc--G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~  413 (472)
T PLN02670        340 GMIHVGWVPQVK---ILSHESVGGFLTHC--G-WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGS  413 (472)
T ss_pred             CeEEeCcCCHHH---HhcCcccceeeecC--C-cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCc
Confidence            377789998766   56566664443432  2 359999999999999976533110   1233446676663      2


Q ss_pred             -CHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          410 -NVKSFVEALELVIRDGP-KVLQRKGLACKEHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       410 -d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                       +.+++.+++.+++.++. +.+++-.++.++.+++.=+.+..++.+++.+.+..
T Consensus       414 ~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~  467 (472)
T PLN02670        414 FTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR  467 (472)
T ss_pred             CcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence             68999999999998721 12333333344445555677888888888777654

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=97.19  E-value=0.049  Score=50.90  Aligned_cols=235  Identities=14%  Similarity=0.045  Sum_probs=126.5

Q ss_pred             hHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEEEecCC---chhHHhhh
Q 044542           97 GMERHASTLYHALAAR-GHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESV---SLPHWRAK  172 (465)
Q Consensus        97 G~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI~~~~~---~~~~~~~~  172 (465)
                      |.+.....|+++|... ++++..+..........    ......................||+|+..+.   ....++++
T Consensus         2 Gh~~Q~~GLa~aL~~~~~~~~~~v~~~~~~~~lp----~~~~~~~~~~~~~~~~~~~~~~pdLiIsaGr~t~~~~~~l~r   77 (311)
T PF06258_consen    2 GHENQSLGLAEALGRLTPYEIKRVDVRRPWRWLP----RLLPAPLRALLKPFSPALEPPWPDLIISAGRRTAPAALALRR   77 (311)
T ss_pred             chHHHHHHHHHHhcCccCcceeEeccccchhhcc----ccccchHHHhhhcccccccCCCCcEEEECCCchHHHHHHHHH
Confidence            6788899999999873 67777776655111000    0000000000001111114567999999764   23333443


Q ss_pred             cCCc---EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCC
Q 044542          173 MVPN---VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQL  249 (465)
Q Consensus       173 ~~p~---~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~  249 (465)
                      ....   .|...+- .                                      ...+.+|.+|+...+         +.
T Consensus        78 ~~gg~~~~V~i~~P-~--------------------------------------~~~~~FDlvi~p~HD---------~~  109 (311)
T PF06258_consen   78 ASGGRTKTVQIMDP-R--------------------------------------LPPRPFDLVIVPEHD---------RL  109 (311)
T ss_pred             HcCCCceEEEEcCC-C--------------------------------------CCccccCEEEECccc---------Cc
Confidence            2221   3333321 0                                      113567888887765         22


Q ss_pred             -CCCCEEEe---cCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC--HH---HHHHHHHHhhhcCCCeE
Q 044542          250 -PQRNVHVI---LNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG--HP---LLYEAFSSITRDHPGVY  320 (465)
Q Consensus       250 -~~~ki~vi---~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg--~~---~ll~a~~~l~~~~~~~~  320 (465)
                       ...++...   +|.++.+.....   ...+..+++-. .++.+.+.+|.-...-.  -+   .+++.+..+.+.+. ..
T Consensus       110 ~~~~Nvl~t~ga~~~i~~~~l~~a---~~~~~~~~~~l-~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~  184 (311)
T PF06258_consen  110 PRGPNVLPTLGAPNRITPERLAEA---AAAWAPRLAAL-PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS  184 (311)
T ss_pred             CCCCceEecccCCCcCCHHHHHHH---HHhhhhhhccC-CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce
Confidence             23344332   344443322221   12222333322 23355556776443322  22   55666666666654 78


Q ss_pred             EEEEeCCcch----hHHHHhc---CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC
Q 044542          321 LLVAGTGPWG----RRYAELG---QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS  392 (465)
Q Consensus       321 l~ivG~g~~~----~~~~~l~---~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg  392 (465)
                      +.|..+-...    +.++++.   ..+.+...-+..-+..+|+.||.++++.   + .-..+.||++.|+||.+...++
T Consensus       185 ~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~---D-SvSMvsEA~~tG~pV~v~~l~~  259 (311)
T PF06258_consen  185 LLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTE---D-SVSMVSEAAATGKPVYVLPLPG  259 (311)
T ss_pred             EEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcC---c-cHHHHHHHHHcCCCEEEecCCC
Confidence            8888874332    2333332   5664555555566999999999999964   2 2347899999999999988776

The function of this family is unknown.

>PLN02554 UDP-glycosyltransferase family protein

Probab=97.18  E-value=0.035  Score=55.58  Aligned_cols=113  Identities=12%  Similarity=0.095  Sum_probs=64.6

Q ss_pred             hcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce----eeeeeCCceEEeC---
Q 044542          336 LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR----TVVVNEELGYTFS---  408 (465)
Q Consensus       336 l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~----e~v~~~~~G~l~~---  408 (465)
                      ..+++.+.+++|+.++... .+.++||.  +  -| -++++||+.+|+|+|+-...+-..    .++..-+.|+.+.   
T Consensus       340 ~~~~g~v~~W~PQ~~iL~H-~~v~~Fvt--H--~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~  413 (481)
T PLN02554        340 TKDIGKVIGWAPQVAVLAK-PAIGGFVT--H--CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYW  413 (481)
T ss_pred             hccCceEEeeCCHHHHhCC-cccCcccc--c--Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccc
Confidence            4478888899986664322 33444553  2  23 358999999999999976543110    1122334455542   


Q ss_pred             ----------C-CHHHHHHHHHHHHhCChHHHH---HHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          409 ----------P-NVKSFVEALELVIRDGPKVLQ---RKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       409 ----------~-d~~~la~~i~~ll~~~~~~~~---~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                                . +.+++.++|.+++.++++.++   ++++.+++.+.+-=|..+..+++.
T Consensus       414 ~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv  473 (481)
T PLN02554        414 RGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFI  473 (481)
T ss_pred             cccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence                      3 889999999999963243332   344444444444323333333333

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=97.12  E-value=0.021  Score=54.84  Aligned_cols=102  Identities=13%  Similarity=0.075  Sum_probs=67.5

Q ss_pred             ccCCCCCCcEEEEEeecc-ccccCHH--HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc----C-----CeEEcCCC
Q 044542          279 KLGVPANVSLVMGVAGRL-VRDKGHP--LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG----Q-----NVKVLGAL  346 (465)
Q Consensus       279 ~~g~~~~~~~~l~~~Grl-~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~----~-----~V~~~g~v  346 (465)
                      .+++..+++++++..|.- .+.|...  .+.+.++.+.+  .++++++.|...+++..+++.    .     .+.+.|..
T Consensus       173 ~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~  250 (348)
T PRK10916        173 AFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGET  250 (348)
T ss_pred             HcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCC
Confidence            344433445776677763 3556543  56677767654  367888889766555444432    1     14567887


Q ss_pred             ChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          347 EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       347 ~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      +-.++..+++.||++|-.    ++-  .+==|.|.|+|+|+-
T Consensus       251 sL~el~ali~~a~l~I~n----DTG--p~HlAaA~g~P~val  286 (348)
T PRK10916        251 QLEQAVILIAACKAIVTN----DSG--LMHVAAALNRPLVAL  286 (348)
T ss_pred             CHHHHHHHHHhCCEEEec----CCh--HHHHHHHhCCCEEEE
Confidence            889999999999999974    222  444588999999974

>PLN02764 glycosyltransferase family protein

Probab=97.11  E-value=0.11  Score=51.25  Aligned_cols=230  Identities=10%  Similarity=0.020  Sum_probs=116.4

Q ss_pred             HhhcccCEEEEeChhHH-HHHHHHhCCC-CCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          224 RFFSSYNQHICISNSAA-EVLVKIYQLP-QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~-~~~~~~~~~~-~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      ..++.++.|++.|-+.. ..+.+.+.-. ..++..|.+-+....  .........-+-+.-.+.+..+.+.+|.... -.
T Consensus       195 ~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~--~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~-~~  271 (453)
T PLN02764        195 TSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPD--KTRELEERWVKWLSGYEPDSVVFCALGSQVI-LE  271 (453)
T ss_pred             HhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcc--ccccchhHHHHHHhCCCCCceEEEeeccccc-CC
Confidence            34577889988874433 3333333110 134555544321110  0000011111222223344477778888743 23


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEe-CCcc--h----hHH-HHh-cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAG-TGPW--G----RRY-AEL-GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG-~g~~--~----~~~-~~l-~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      .+.+.+.+..|...+.++..++-- .+..  .    +.+ ++. +..+.+.+|+|+.++... .+.+++|.  +   |--
T Consensus       272 ~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h-~~v~~Fvt--H---~G~  345 (453)
T PLN02764        272 KDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSH-PSVGCFVS--H---CGF  345 (453)
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcC-cccCeEEe--c---CCc
Confidence            345566666555544455444431 1110  1    111 111 255677799987774333 23344554  2   223


Q ss_pred             HHHHHHHHcCCeEEecCCCCcce---eeee-eCCceEEeC-----C-CHHHHHHHHHHHHhCChHHHHHHHHHH---HHH
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVR---TVVV-NEELGYTFS-----P-NVKSFVEALELVIRDGPKVLQRKGLAC---KEH  439 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~---e~v~-~~~~G~l~~-----~-d~~~la~~i~~ll~~~~~~~~~~~~~~---~~~  439 (465)
                      ++++||+.+|+|+|+-...+-..   ..+. .-+.|+.+.     . +.+++.+++.+++.++.+..+++.+++   ++.
T Consensus       346 nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~  425 (453)
T PLN02764        346 GSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRET  425 (453)
T ss_pred             hHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence            59999999999999976543110   1232 234455431     3 789999999999987323334444433   333


Q ss_pred             HHhhCCHHHHHHHHHHHHHHhcC
Q 044542          440 ALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       440 ~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      +++.=|..+..+++.+.+.+..+
T Consensus       426 ~~~~GSS~~~l~~lv~~~~~~~~  448 (453)
T PLN02764        426 LASPGLLTGYVDNFIESLQDLVS  448 (453)
T ss_pred             HHhcCCHHHHHHHHHHHHHHhcc
Confidence            44433555556666665555443

>PLN02555 limonoid glucosyltransferase

Probab=97.11  E-value=0.14  Score=51.15  Aligned_cols=119  Identities=11%  Similarity=0.041  Sum_probs=70.0

Q ss_pred             HHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeC-CceEEeC-
Q 044542          334 AELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNE-ELGYTFS-  408 (465)
Q Consensus       334 ~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~-  408 (465)
                      ++..+++.+.+++|+.++... .+..++|..  .  | -++++||+.+|+|+|+-..-+-..   ..+.+. +.|+.+. 
T Consensus       333 ~~~~~~g~v~~W~PQ~~iL~H-~~v~~FvtH--~--G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~  406 (480)
T PLN02555        333 EKAGDKGKIVQWCPQEKVLAH-PSVACFVTH--C--G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCR  406 (480)
T ss_pred             hhcCCceEEEecCCHHHHhCC-CccCeEEec--C--C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccC
Confidence            344578888999987664332 445556642  2  2 359999999999999976543110   123333 5666651 


Q ss_pred             ------C-CHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          409 ------P-NVKSFVEALELVIRDGP-----KVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       409 ------~-d~~~la~~i~~ll~~~~-----~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                            . +.+++.+++.+++.++.     +..+++++.+++.+.+.=|..+..+++.+-+.
T Consensus       407 ~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~  468 (480)
T PLN02555        407 GEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLV  468 (480)
T ss_pred             CccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence                  2 68999999999997521     12233444455555443344444455544443

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=97.10  E-value=0.27  Score=46.70  Aligned_cols=306  Identities=14%  Similarity=0.090  Sum_probs=147.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCcccCCcceEEEe--ec--C---CCccc-
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHNDVHQGNLHVHFA--AN--D---HGSVN-  149 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~v~~~--~~--~---~~~~~-  149 (465)
                      ||++++...   +....|-+..+..+.+.|++.  ..++.+++..+............+.....  ..  +   ...+. 
T Consensus         1 m~~~L~g~~---g~gN~Gdeail~all~~l~~~~~~~~~~~~~~~p~~i~~p~~~~~~p~~~~~~l~g~~k~v~R~~~k~   77 (385)
T COG2327           1 MKALLLGYY---GFGNIGDEAILKALLDMLRRLNPDAKVLVMGRRPPVIVDPVFLSANPEGSAAGLNGRVKSVLRRRLKH   77 (385)
T ss_pred             CeeEEEeee---cCCCcccHHHHHHHHHHHHhhCcccceeeeecCCcccccceeecCCcccCchhhhHHHHHHHHHhhcc
Confidence            677777653   246678899999999999865  56777777665222111111111100000  00  0   00000 


Q ss_pred             -----cC-CCCCCcEEEecCCchh-----------------HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCC
Q 044542          150 -----LN-NDGAFDYVHTESVSLP-----------------HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLP  206 (465)
Q Consensus       150 -----~~-~~~~~DiI~~~~~~~~-----------------~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~  206 (465)
                           .. .-.+.|+++..+..+.                 .....+.| ++..-|+..+.                 ..
T Consensus        78 ~~~~~il~~l~~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~kp-~~~~g~svGP~-----------------~~  139 (385)
T COG2327          78 PGLVSILSALGKADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAGKP-TFFFGQSVGPL-----------------KH  139 (385)
T ss_pred             ccHHHHHHHhhhCCEEEEcCcccccCccccceehhhHHHHHHHHHcCCC-EEEEeccCCCc-----------------cC
Confidence                 00 3457888877643211                 11113445 66666654321                 11


Q ss_pred             CchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCC
Q 044542          207 GSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANV  286 (465)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~  286 (465)
                          ...+++.+     ..++.+..+++-.+...+.++. .|++..   ...   |....-+.........  -+....+
T Consensus       140 ----~~s~~~~~-----~~~~~~s~i~vRD~~S~~llk~-~gi~a~---l~~---D~Af~L~~~~~~~~~~--~~~~~~~  201 (385)
T COG2327         140 ----PLSRQLLN-----YVLGGCSAISVRDPVSYELLKQ-LGINAR---LVT---DPAFLLPASSQNATAS--DVEAREK  201 (385)
T ss_pred             ----HHHHHHHH-----HHhcCCcEEEEecHHhHHHHHH-cCCCeE---eec---Ccceeccccccccccc--ccccccc
Confidence                11122211     4467788888888888888875 676432   222   4443222111100000  0111122


Q ss_pred             cEEEEEeeccccc--cCH---HHHHHHHHHh---hhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHH
Q 044542          287 SLVMGVAGRLVRD--KGH---PLLYEAFSSI---TRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLS  352 (465)
Q Consensus       287 ~~~l~~~Grl~~~--Kg~---~~ll~a~~~l---~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~  352 (465)
                      ...+.+-| +.+.  +..   ...-+++..+   ....-.+.++-.+..+...-.+.+    .  +++.+..-...+++-
T Consensus       202 ~~~i~lr~-~~~~~t~~~~~~~~v~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~  280 (385)
T COG2327         202 TVAITLRG-LHPDNTAQRSILKYVNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELG  280 (385)
T ss_pred             eEEEEecc-cCCchhhhHHHHHHHHHHHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHH
Confidence            23443333 3332  222   1222333332   221112233333333332222222    2  566664433246777


Q ss_pred             HHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeee-CCceEEeC--C-CHHHHHHHHHHHHhCChHH
Q 044542          353 EFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN-EELGYTFS--P-NVKSFVEALELVIRDGPKV  428 (465)
Q Consensus       353 ~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~-~~~G~l~~--~-d~~~la~~i~~ll~~~~~~  428 (465)
                      ..++++|+.|-.-++      +++=||+.|+|+|+-....=...+.++ +-.++..+  + |.+.+.+...+.+.+.++.
T Consensus       281 ~~l~~~dl~Vg~R~H------saI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~~~~  354 (385)
T COG2327         281 GILAACDLIVGMRLH------SAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKLDEL  354 (385)
T ss_pred             HHhccCceEEeehhH------HHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhccHHH
Confidence            899999999986655      777899999999986543211111111 22233333  4 8888988888887774554


Q ss_pred             HHH
Q 044542          429 LQR  431 (465)
Q Consensus       429 ~~~  431 (465)
                      +++
T Consensus       355 ~~~  357 (385)
T COG2327         355 RER  357 (385)
T ss_pred             Hhh
Confidence            443

>PLN02562 UDP-glycosyltransferase

Probab=97.10  E-value=0.019  Score=56.88  Aligned_cols=132  Identities=17%  Similarity=0.101  Sum_probs=79.1

Q ss_pred             EEEEEeeccc---cccCHHHHHHHHHHhhhcCCCeEEEE-EeCC---cchh-HHHHhcCCeEEcCCCChhHHHHHHHhcC
Q 044542          288 LVMGVAGRLV---RDKGHPLLYEAFSSITRDHPGVYLLV-AGTG---PWGR-RYAELGQNVKVLGALEAHQLSEFYNALD  359 (465)
Q Consensus       288 ~~l~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g---~~~~-~~~~l~~~V~~~g~v~~~~~~~~~~~aD  359 (465)
                      .+.+.+|...   +.+-+..+..+++..    +. .+++ +..+   ...+ ..++..+++.+.+++|+.+   ++...+
T Consensus       275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~----g~-~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~---iL~h~~  346 (448)
T PLN02562        275 VIYISFGSWVSPIGESNVRTLALALEAS----GR-PFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLE---VLKHQA  346 (448)
T ss_pred             eEEEEecccccCCCHHHHHHHHHHHHHC----CC-CEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHH---HhCCCc
Confidence            5666788754   233444555555554    22 3333 3321   1211 2233457899999998766   455566


Q ss_pred             eEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeee-CCceEEeCC-CHHHHHHHHHHHHhCChHHHHH
Q 044542          360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVN-EELGYTFSP-NVKSFVEALELVIRDGPKVLQR  431 (465)
Q Consensus       360 v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~-~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~  431 (465)
                      +..+-++.  | -++++||+.+|+|+|+....+-..   ..+.+ -+.|+-+.. +.+++++++.+++.+ ++.+++
T Consensus       347 v~~fvtH~--G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~~-~~~r~~  419 (448)
T PLN02562        347 VGCYLTHC--G-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVMED-SGMGER  419 (448)
T ss_pred             cceEEecC--c-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHhCC-HHHHHH
Confidence            54443432  3 358999999999999876543210   22333 356666666 899999999999987 544433

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.07  E-value=0.16  Score=44.97  Aligned_cols=254  Identities=14%  Similarity=0.066  Sum_probs=125.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC-CccccCCCCCCcE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH-GSVNLNNDGAFDY  158 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~Di  158 (465)
                      |||-.++.      ...|....+..|++.|.+.-+.+.++....-.......-... .++...... .......+..||+
T Consensus         1 ~ki~aisD------~RtGnt~QaiaLa~~l~r~eyttk~l~~~~l~~lP~~wl~~y-p~~~~~~l~~~~~~r~p~~~Pdl   73 (329)
T COG3660           1 MKIWAISD------GRTGNTHQAIALAEQLTRSEYTTKLLEYNNLAKLPNFWLAYY-PIHILRELFGPRLSRKPEQRPDL   73 (329)
T ss_pred             CceEEeec------CCCccHHHHHHHHHHhhccceEEEEeeccccccCchhhhhcC-ccHhHHHhhcCccccCccCCCce
Confidence            68888876      457888899999999987546666665552221111000000 000000000 0111114567999


Q ss_pred             EEecCC---chhHHhhhc--CCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEE
Q 044542          159 VHTESV---SLPHWRAKM--VPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHI  233 (465)
Q Consensus       159 I~~~~~---~~~~~~~~~--~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii  233 (465)
                      ++.-+-   .+...+.+.  .+ .++.+.+..                                      --++..|.+|
T Consensus        74 ~I~aGrrta~l~~~lkk~~~~~-~vVqI~~Pr--------------------------------------lp~~~fDlvi  114 (329)
T COG3660          74 IITAGRRTAPLAFYLKKKFGGI-KVVQIQDPR--------------------------------------LPYNHFDLVI  114 (329)
T ss_pred             EEecccchhHHHHHHHHhcCCc-eEEEeeCCC--------------------------------------CCcccceEEe
Confidence            998763   222223322  23 333333311                                      0123457777


Q ss_pred             EeChhHHHHHHHHhCCCCCCEEEe---cCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCH--H---HH
Q 044542          234 CISNSAAEVLVKIYQLPQRNVHVI---LNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGH--P---LL  305 (465)
Q Consensus       234 ~~S~~~~~~~~~~~~~~~~ki~vi---~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~--~---~l  305 (465)
                      +.-.+..+....    ...++.-|   +|.|......+   .++.+ +.++ |..++++-+++|.-.+.-.+  +   .+
T Consensus       115 vp~HD~~~~~s~----~~~Nilpi~Gs~h~Vt~~~lAa---~~e~~-~~~~-p~~rq~vAVlVGg~nk~f~~~~d~a~q~  185 (329)
T COG3660         115 VPYHDWREELSD----QGPNILPINGSPHNVTSQRLAA---LREAF-KHLL-PLPRQRVAVLVGGNNKAFVFQEDKAHQF  185 (329)
T ss_pred             ccchhhhhhhhc----cCCceeeccCCCCcccHHHhhh---hHHHH-HhhC-CCCCceEEEEecCCCCCCccCHHHHHHH
Confidence            766655554222    12344333   22232222111   12222 2333 55556777788876553333  2   22


Q ss_pred             HHHHHHhhhcCCCeEEEEEeCCcchhHHHH-----hc--CCeEEcCC-CChhHHHHHHHhcCeEEecccCCCCCcHHHHH
Q 044542          306 YEAFSSITRDHPGVYLLVAGTGPWGRRYAE-----LG--QNVKVLGA-LEAHQLSEFYNALDVFVNPTLRPQGLDLTLIE  377 (465)
Q Consensus       306 l~a~~~l~~~~~~~~l~ivG~g~~~~~~~~-----l~--~~V~~~g~-v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~E  377 (465)
                      ..++.+..++ ....+++--+-...+..+.     +.  .-+.+-+. ..+.-..+++++||.+|.+..    .=....|
T Consensus       186 ~~~l~k~l~~-~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaD----SinM~sE  260 (329)
T COG3660         186 ASLLVKILEN-QGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTAD----SINMCSE  260 (329)
T ss_pred             HHHHHHHHHh-CCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecc----hhhhhHH
Confidence            2333322222 2455666554333333322     22  23333332 133568899999999998542    2236789


Q ss_pred             HHHcCCeEEecCCCCc
Q 044542          378 AMHCGRTVLTPNYPSI  393 (465)
Q Consensus       378 Ama~G~PvI~s~~gg~  393 (465)
                      |.+.|+||-+...++.
T Consensus       261 AasTgkPv~~~~~~~~  276 (329)
T COG3660         261 AASTGKPVFILEPPNF  276 (329)
T ss_pred             HhccCCCeEEEecCCc
Confidence            9999999988655443

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=97.05  E-value=0.12  Score=47.47  Aligned_cols=152  Identities=16%  Similarity=0.116  Sum_probs=86.0

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP  303 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~  303 (465)
                      ..+++++.+.+-.+...+.+.+ +|++. ++.++|..+=  ...+....  ....+   .......+..........-.+
T Consensus       123 ~~l~~~~~i~vRD~~S~~~l~~-~g~~~-~~~~~~D~af--~l~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~  193 (286)
T PF04230_consen  123 RILSKADYISVRDEYSYELLKK-LGISG-NVKLVPDPAF--LLPPSYPD--EDKSK---PKRNYISVSNSPSRNNEEYIE  193 (286)
T ss_pred             HHHhCCCEEEECCHHHHHHHHH-cCCCC-CcEEEeCchh--hcCccccc--ccccc---cccceeeeccccchhhhhHHH
Confidence            5567889988887777775555 78765 7888776541  11111110  00000   011101121111212233455


Q ss_pred             HHHHHHHHhhhcCCCeEEEEEeCCcchh---HH------HHhc-CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcH
Q 044542          304 LLYEAFSSITRDHPGVYLLVAGTGPWGR---RY------AELG-QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDL  373 (465)
Q Consensus       304 ~ll~a~~~l~~~~~~~~l~ivG~g~~~~---~~------~~l~-~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~  373 (465)
                      .+.+.+..+.+.+..+.+......+...   ..      .... .........+.+++..+++.+|++|....+      
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH------  267 (286)
T PF04230_consen  194 EIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRLH------  267 (286)
T ss_pred             HHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCCH------
Confidence            5666777776654445544444322211   11      1111 344555666889999999999999998776      


Q ss_pred             HHHHHHHcCCeEEecCC
Q 044542          374 TLIEAMHCGRTVLTPNY  390 (465)
Q Consensus       374 ~~~EAma~G~PvI~s~~  390 (465)
                      ..+=|+++|+|+|+-+.
T Consensus       268 ~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  268 GAILALSLGVPVIAISY  284 (286)
T ss_pred             HHHHHHHcCCCEEEEec
Confidence            67779999999998654

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=96.97  E-value=0.02  Score=56.61  Aligned_cols=159  Identities=16%  Similarity=0.012  Sum_probs=88.7

Q ss_pred             CcEEEEEeecccc--ccCHHHHHHHHHHhhhcCCCeEEEEEeCC---------cc-------hhHHHHhcCCeEEcCCCC
Q 044542          286 VSLVMGVAGRLVR--DKGHPLLYEAFSSITRDHPGVYLLVAGTG---------PW-------GRRYAELGQNVKVLGALE  347 (465)
Q Consensus       286 ~~~~l~~~Grl~~--~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g---------~~-------~~~~~~l~~~V~~~g~v~  347 (465)
                      +..+.+.+|.+..  .+.++.+..+++....   .+ +..+.+.         ..       ....++..++..+.+++|
T Consensus       261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~---~f-lWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~P  336 (455)
T PLN02152        261 SSVIYVSFGTMVELSKKQIEELARALIEGKR---PF-LWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCS  336 (455)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHHcCC---Ce-EEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCC
Confidence            3467778887642  4445566666666532   22 3334321         10       112223457888889998


Q ss_pred             hhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeC-CceEEeC-----C-CHHHHHHH
Q 044542          348 AHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNE-ELGYTFS-----P-NVKSFVEA  417 (465)
Q Consensus       348 ~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~-----~-d~~~la~~  417 (465)
                      +.+   +++..++..+-++.  | -++++||+.+|+|+|+-...+-..   ..+.+. +.|+-+.     . +.++++++
T Consensus       337 Q~~---iL~h~~vg~fvtH~--G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~a  410 (455)
T PLN02152        337 QIE---VLRHRAVGCFVTHC--G-WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRC  410 (455)
T ss_pred             HHH---HhCCcccceEEeeC--C-cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHH
Confidence            665   67777765554532  2 359999999999999876532110   122221 2344432     2 78999999


Q ss_pred             HHHHHhCChH----HHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          418 LELVIRDGPK----VLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       418 i~~ll~~~~~----~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                      +.+++.++.+    ...++++.+++.+.+--|..+..+++.
T Consensus       411 v~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li  451 (455)
T PLN02152        411 LEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFV  451 (455)
T ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence            9999976221    222334445555444444444434333

>PLN00164 glucosyltransferase; Provisional

Probab=96.96  E-value=0.25  Score=49.48  Aligned_cols=81  Identities=7%  Similarity=-0.031  Sum_probs=52.9

Q ss_pred             CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eee-eeCCceEEeC-----
Q 044542          338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVV-VNEELGYTFS-----  408 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v-~~~~~G~l~~-----  408 (465)
                      ..+.+.+++|+.+   ++...++..+-++.  |+ ++++||+.+|+|+|+-..-+-..   ..+ ..-+.|+.+.     
T Consensus       339 ~g~~v~~w~PQ~~---iL~h~~vg~fvtH~--Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~  412 (480)
T PLN00164        339 RGLVWPTWAPQKE---ILAHAAVGGFVTHC--GW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR  412 (480)
T ss_pred             CCeEEeecCCHHH---HhcCcccCeEEeec--cc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc
Confidence            4467779987665   56666754443432  32 48999999999999965432110   122 2235566552     


Q ss_pred             --C-CHHHHHHHHHHHHhC
Q 044542          409 --P-NVKSFVEALELVIRD  424 (465)
Q Consensus       409 --~-d~~~la~~i~~ll~~  424 (465)
                        . +.++++++|.+++.+
T Consensus       413 ~~~~~~e~l~~av~~vm~~  431 (480)
T PLN00164        413 DNFVEAAELERAVRSLMGG  431 (480)
T ss_pred             CCcCcHHHHHHHHHHHhcC
Confidence              2 689999999999976

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=96.96  E-value=0.052  Score=52.16  Aligned_cols=95  Identities=8%  Similarity=0.013  Sum_probs=64.1

Q ss_pred             cEEEEEeeccccccCHH--HHHHHHHHhhhcCCCeEEEEEeCCcc--hhHHHHhc------CCeEEcCCCChhHHHHHHH
Q 044542          287 SLVMGVAGRLVRDKGHP--LLYEAFSSITRDHPGVYLLVAGTGPW--GRRYAELG------QNVKVLGALEAHQLSEFYN  356 (465)
Q Consensus       287 ~~~l~~~Grl~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~~~~l~------~~V~~~g~v~~~~~~~~~~  356 (465)
                      +++++..|.-.+.|...  .+.+.+..+.++  +.++++.|...+  .+..+++.      ..+.+.|..+-.++..+++
T Consensus       184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~--~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~  261 (352)
T PRK10422        184 NYVVIQPTARQIFKCWDNDKFSAVIDALQAR--GYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID  261 (352)
T ss_pred             CeEEEecCCCccccCCCHHHHHHHHHHHHHC--CCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence            46776777766667644  677777777553  567888875322  22223322      2355788888899999999


Q ss_pred             hcCeEEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542          357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN  389 (465)
Q Consensus       357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~  389 (465)
                      .||++|-.    ++-  .+-=|.|.|+|+|+-=
T Consensus       262 ~a~l~v~n----DSG--p~HlAaA~g~P~v~lf  288 (352)
T PRK10422        262 HAQLFIGV----DSA--PAHIAAAVNTPLICLF  288 (352)
T ss_pred             hCCEEEec----CCH--HHHHHHHcCCCEEEEE
Confidence            99999973    222  4445789999999753

>PLN03004 UDP-glycosyltransferase

Probab=96.93  E-value=0.013  Score=57.77  Aligned_cols=80  Identities=13%  Similarity=0.058  Sum_probs=58.0

Q ss_pred             CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeee-CCceEEeC----
Q 044542          338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVN-EELGYTFS----  408 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~-~~~G~l~~----  408 (465)
                      .++.+.+|+|+.+   +++.+++..+-++.  | -++++||+++|+|+|+-...+    .. ..+.+ -+.|+.++    
T Consensus       334 ~g~~v~~W~PQ~~---iL~H~~v~~FvTH~--G-~nS~lEal~~GVP~v~~P~~~DQ~~na-~~~~~~~g~g~~l~~~~~  406 (451)
T PLN03004        334 KGMVVKSWAPQVP---VLNHKAVGGFVTHC--G-WNSILEAVCAGVPMVAWPLYAEQRFNR-VMIVDEIKIAISMNESET  406 (451)
T ss_pred             CcEEEEeeCCHHH---HhCCCccceEeccC--c-chHHHHHHHcCCCEEeccccccchhhH-HHHHHHhCceEEecCCcC
Confidence            6888999998776   67788885554532  2 359999999999999976432    11 22332 35676664    


Q ss_pred             -C-CHHHHHHHHHHHHhC
Q 044542          409 -P-NVKSFVEALELVIRD  424 (465)
Q Consensus       409 -~-d~~~la~~i~~ll~~  424 (465)
                       . +.+++++++.+++.+
T Consensus       407 ~~~~~e~l~~av~~vm~~  424 (451)
T PLN03004        407 GFVSSTEVEKRVQEIIGE  424 (451)
T ss_pred             CccCHHHHHHHHHHHhcC
Confidence             3 789999999999987

>PLN02167 UDP-glycosyltransferase family protein

Probab=96.89  E-value=0.053  Score=54.23  Aligned_cols=156  Identities=14%  Similarity=0.081  Sum_probs=85.7

Q ss_pred             cEEEEEeecccc--ccCHHHHHHHHHHhhhcCCCeEEE-EEeCCcc---------h-hHHHHhcCCeEEcCCCChhHHHH
Q 044542          287 SLVMGVAGRLVR--DKGHPLLYEAFSSITRDHPGVYLL-VAGTGPW---------G-RRYAELGQNVKVLGALEAHQLSE  353 (465)
Q Consensus       287 ~~~l~~~Grl~~--~Kg~~~ll~a~~~l~~~~~~~~l~-ivG~g~~---------~-~~~~~l~~~V~~~g~v~~~~~~~  353 (465)
                      +.+.+.+|....  .+.+..+.++++..     +..++ .++....         . ...++..+++.+.+++|+.+   
T Consensus       281 svvyvsfGS~~~~~~~~~~ela~~l~~~-----~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~---  352 (475)
T PLN02167        281 SVVFLCFGSLGSLPAPQIKEIAQALELV-----GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVE---  352 (475)
T ss_pred             ceEEEeecccccCCHHHHHHHHHHHHhC-----CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHH---
Confidence            356567787632  33355555555554     22343 3332110         1 11223335567789997665   


Q ss_pred             HHHhcC--eEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---e-eeeeCCceEEeC---------C-CHHHHHHH
Q 044542          354 FYNALD--VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---T-VVVNEELGYTFS---------P-NVKSFVEA  417 (465)
Q Consensus       354 ~~~~aD--v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e-~v~~~~~G~l~~---------~-d~~~la~~  417 (465)
                      +++...  +||.  +  -|+ ++++||+++|+|+|+-...+-..   . ++..-+.|+.+.         . +.++++++
T Consensus       353 iL~h~~vg~fvt--H--~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~a  427 (475)
T PLN02167        353 ILAHKAIGGFVS--H--CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGA  427 (475)
T ss_pred             HhcCcccCeEEe--e--CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHH
Confidence            565544  4554  2  232 48999999999999866432110   0 122334565542         3 78999999


Q ss_pred             HHHHHhCC---hHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542          418 LELVIRDG---PKVLQRKGLACKEHALSMFTATKMASAYER  455 (465)
Q Consensus       418 i~~ll~~~---~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  455 (465)
                      +.+++.++   .+..+++++.+++.+.+.=|..+..+++.+
T Consensus       428 v~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~  468 (475)
T PLN02167        428 VRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFID  468 (475)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence            99999763   223345555666666554444444444443

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=96.87  E-value=0.064  Score=47.71  Aligned_cols=292  Identities=14%  Similarity=0.103  Sum_probs=141.1

Q ss_pred             ChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcc-cCCcceEEEeecCCCccccC--CCCCCcEEEecCCchhH----
Q 044542           96 GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDV-HQGNLHVHFAANDHGSVNLN--NDGAFDYVHTESVSLPH----  168 (465)
Q Consensus        96 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~--~~~~~DiI~~~~~~~~~----  168 (465)
                      .|+.++..++-..+.+.||++.++..........+. ......+......  ...-.  +-..+||++++++....    
T Consensus         1 CGVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~~~~--e~de~v~~vN~yDI~m~nSvPa~~vqE~   78 (355)
T PF11440_consen    1 CGVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKYLAK--EYDETVKKVNDYDIVMFNSVPATKVQEA   78 (355)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE-TTT--HHHHHHHHHTSSSEEEEEE--BTTS-HH
T ss_pred             CCccccHHHHHHHHHhcCCeeEEEEecccccCCccccccceeeeehhhHH--HHHHHHHHhhccCEEEEecccCchHHHH
Confidence            378899999999999999999999887654333221 1122222211100  00000  23479999998763221    


Q ss_pred             ------HhhhcC--C-cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhH
Q 044542          169 ------WRAKMV--P-NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSA  239 (465)
Q Consensus       169 ------~~~~~~--p-~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~  239 (465)
                            -+..++  + ++|...|+........        .+                   .....++.+|.|.+.|...
T Consensus        79 ~iNnY~kii~~Ik~~ik~V~~~Hdh~~lsI~r--------n~-------------------~le~~m~~~DvIfshs~~g  131 (355)
T PF11440_consen   79 IINNYEKIIKKIKPSIKVVGFMHDHNKLSIDR--------NP-------------------YLEGTMNEMDVIFSHSDNG  131 (355)
T ss_dssp             HHHHHHHHHHCS-TTSEEEEEE---SHHHHTT--------BS-------------------SHHHHHHH-SEEEES-TTS
T ss_pred             HHHHHHHHHHhccccceeEEEeeccceeeccc--------cc-------------------cHHHHHHhhcEEEeccccc
Confidence                  111222  1 2578888864432211        11                   1115567899999887542


Q ss_pred             --HHH-HHHHhCCC---CCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEE---EEeeccccccCHHHHHHHHH
Q 044542          240 --AEV-LVKIYQLP---QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVM---GVAGRLVRDKGHPLLYEAFS  310 (465)
Q Consensus       240 --~~~-~~~~~~~~---~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l---~~~Grl~~~Kg~~~ll~a~~  310 (465)
                        ... ..+.++-.   .+++...|-...   |++. .+-...|..+...... +..   .|+||..-.||...+++.-+
T Consensus       132 ~f~kv~m~~l~Ps~~~l~~~i~~~p~v~n---fqpp-~~i~~~Rstywkd~se-~nmnv~~yigR~Tt~kG~~~mfD~h~  206 (355)
T PF11440_consen  132 WFSKVLMKELLPSKVSLFDRIKKFPMVFN---FQPP-MDINKYRSTYWKDVSE-KNMNVNRYIGRQTTWKGPRRMFDLHE  206 (355)
T ss_dssp             HHHHTHHHHHS-SS--SSS-------EEE--------B-HHHHHHHH---GGG-SEEEEEEEE--SSGGG-HHHHHHHHH
T ss_pred             hHHHHHHHhhccccCchhhhhhhcceeee---cCCc-ccHHHHHHHHhhhhHh-hhcccceeeeeeeeecCcHHHhhhHH
Confidence              222 22433211   123333333221   1121 1112344444422222 333   59999999999999999888


Q ss_pred             HhhhcCCCeEEEEEeCCcchhH--HHH-----------------hc--CCeEEcCCCChhHHHHHHHhcCeEEeccc---
Q 044542          311 SITRDHPGVYLLVAGTGPWGRR--YAE-----------------LG--QNVKVLGALEAHQLSEFYNALDVFVNPTL---  366 (465)
Q Consensus       311 ~l~~~~~~~~l~ivG~g~~~~~--~~~-----------------l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~---  366 (465)
                      +..+. ++++-++-|-....+.  +.+                 +.  ..+-++|..=.+|..+.++.+-....-+.   
T Consensus       207 ~~lK~-~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~  285 (355)
T PF11440_consen  207 KILKP-AGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQ  285 (355)
T ss_dssp             HTTTT-TT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----G
T ss_pred             HhcCC-cchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHH
Confidence            76665 7888888884221111  111                 11  34777787767899999998877765321   


Q ss_pred             -C-CCCCcHHHHHHHHcCC-eEEecCCC--------CcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542          367 -R-PQGLDLTLIEAMHCGR-TVLTPNYP--------SIVRTVVVNEELGYTFSP-NVKSFVEALELVIRD  424 (465)
Q Consensus       367 -~-~eg~~~~~~EAma~G~-PvI~s~~g--------g~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~  424 (465)
                       + .+.+-.+-+|..|||. ||.-...|        |.+  ++......+.++. |.++-.+.|.++..+
T Consensus       286 ~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~--~~~~~~~~I~~De~dle~T~ekl~E~a~~  353 (355)
T PF11440_consen  286 KYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTR--YIDHPYSAIYFDENDLESTVEKLIEVANN  353 (355)
T ss_dssp             GG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSB--GGSS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred             HHHHhhhhhheeeeeeeceeeeeeccccccceeeecCce--eeccCcceeEeccchHHHHHHHHHHHhcc
Confidence             1 2346789999999998 66554332        222  2333444566666 888888888887665

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=96.73  E-value=0.0097  Score=60.86  Aligned_cols=124  Identities=19%  Similarity=0.139  Sum_probs=91.8

Q ss_pred             cEEEEEeeccccccCHHHHHHH----HHHhh-hcCCCeEEEEEeCCcc-----hhHHHHh---------cCCeEEcCCCC
Q 044542          287 SLVMGVAGRLVRDKGHPLLYEA----FSSIT-RDHPGVYLLVAGTGPW-----GRRYAEL---------GQNVKVLGALE  347 (465)
Q Consensus       287 ~~~l~~~Grl~~~Kg~~~ll~a----~~~l~-~~~~~~~l~ivG~g~~-----~~~~~~l---------~~~V~~~g~v~  347 (465)
                      .+.++++-|+..+|...+.+.-    ...++ +..|.+.+++.|.-..     ++.++.+         ..+|.|+...+
T Consensus       487 ~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYd  566 (750)
T COG0058         487 ALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYD  566 (750)
T ss_pred             cceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCC
Confidence            3788899999999998866543    33344 3346687888886321     1112211         15689999887


Q ss_pred             hhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHcCCeEEecCCCCcceeeee--eCCceEEeCCCH
Q 044542          348 AHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVV--NEELGYTFSPNV  411 (465)
Q Consensus       348 ~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~--~~~~G~l~~~d~  411 (465)
                      -.-...++.+|||-.+.|.. -|..|++-+-+|.-|.+.|+|--|... |+.+  ++++|++|-.+.
T Consensus       567 vslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanv-Ei~e~vg~~N~~~fG~~~  632 (750)
T COG0058         567 VSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANV-EIYEHVGGENGWIFGETV  632 (750)
T ss_pred             hhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHH-HHHHhcCCCceEEeCCch
Confidence            66777788999999986642 388999999999999999999988887 7765  889999998633

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=96.72  E-value=0.021  Score=59.08  Aligned_cols=194  Identities=18%  Similarity=0.231  Sum_probs=125.2

Q ss_pred             CEEEecCCCCCCCccCCccc------CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCC----eEEE
Q 044542          253 NVHVILNGVDETKFVHDPEA------GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLL  322 (465)
Q Consensus       253 ki~vi~ngvd~~~~~~~~~~------~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~  322 (465)
                      .+..+|-|+|...+......      ..+++..+    .++.+++.+-++..-||...=+.|+.++.+++|+    +.++
T Consensus       240 ~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvli  315 (732)
T KOG1050|consen  240 SVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLI  315 (732)
T ss_pred             eeeecccccchHHhhccccchhHHHHHHHHhhhc----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEE
Confidence            45667778887776543221      12233322    2335555778899999999989999999888864    4444


Q ss_pred             EEeCC---cch--hHHH--------Hh----c----CC-eEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHH
Q 044542          323 VAGTG---PWG--RRYA--------EL----G----QN-VKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMH  380 (465)
Q Consensus       323 ivG~g---~~~--~~~~--------~l----~----~~-V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma  380 (465)
                      .+..+   +..  +.++        +.    +    .. +.+...++..++.+++..+|+.+..+.+ +|..++.+|+.+
T Consensus       316 qi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~r-dGmnl~~~e~i~  394 (732)
T KOG1050|consen  316 QIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWR-DGMNLVFLEYIL  394 (732)
T ss_pred             EEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccc-cccchhhhHHHH
Confidence            44432   111  1111        11    1    23 3456778999999999999999999965 999999999998


Q ss_pred             cC----CeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542          381 CG----RTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYER  455 (465)
Q Consensus       381 ~G----~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  455 (465)
                      |.    .+.|.+..-|.. +.+.  ....++.+ |.++++.+|..++..+.+.++..-......+.. ++....+.....
T Consensus       395 ~~~~~~~~lVlsef~G~~-~tl~--d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~-~~~~~W~~~~~~  470 (732)
T KOG1050|consen  395 CQENKKSVLVLSEFIGDD-TTLE--DAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVST-HDVVYWAKSFLQ  470 (732)
T ss_pred             hhcccCCceEEeeecccc-cccc--ccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcc-hhHHHHHHHHHH
Confidence            85    567777776665 4433  34677788 999999999999998555444333333333222 344444443333

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=96.70  E-value=0.14  Score=47.88  Aligned_cols=146  Identities=14%  Similarity=0.144  Sum_probs=83.5

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccc--cccC
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLV--RDKG  301 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~--~~Kg  301 (465)
                      ..+++++.+.+-.+...+.+++ +|+   ++.+.+.   +...-+....    ...  ...+++.+.+.+....  ..+.
T Consensus       123 ~~l~~~~~i~vRD~~S~~~l~~-~g~---~i~~~~D---~a~~l~~~~~----~~~--~~~~~~~i~i~~r~~~~~~~~~  189 (298)
T TIGR03609       123 RVLRGCRAISVRDAASYRLLKR-LGI---PAELAAD---PVWLLPPEPW----PGG--EPLPEPVIVVSLRPWPLLDVSR  189 (298)
T ss_pred             HHHccCCEEEEeCHHHHHHHHH-hCC---CceEeCC---hhhhCCCCcc----ccc--ccCCCCeEEEEECCCCcCCHHH
Confidence            5678999998888888888766 675   4555543   3222111110    000  0112223333332211  1223


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEeC--CcchhHHHHhc----CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAGT--GPWGRRYAELG----QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL  375 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG~--g~~~~~~~~l~----~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~  375 (465)
                      .+.+.+++..+.++. +.+++++..  ..+.+..+++.    +...++...+.+++..+++.+|++|-...+      .+
T Consensus       190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~RlH------~~  262 (298)
T TIGR03609       190 LLRLLRALDRLQRDT-GAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRLH------AL  262 (298)
T ss_pred             HHHHHHHHHHHHHhh-CCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEechH------HH
Confidence            456777777776552 444544442  22333333332    222333556778999999999999987766      77


Q ss_pred             HHHHHcCCeEEecC
Q 044542          376 IEAMHCGRTVLTPN  389 (465)
Q Consensus       376 ~EAma~G~PvI~s~  389 (465)
                      +=|+.+|+|+|+-.
T Consensus       263 I~A~~~gvP~i~i~  276 (298)
T TIGR03609       263 ILAAAAGVPFVALS  276 (298)
T ss_pred             HHHHHcCCCEEEee
Confidence            88999999999754

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia

Probab=96.60  E-value=0.64  Score=43.49  Aligned_cols=306  Identities=13%  Similarity=0.074  Sum_probs=170.0

Q ss_pred             CCChHHHHHHHHHHHHHhCC--cEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEEEecCCch-----
Q 044542           94 APGGMERHASTLYHALAARG--HEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSL-----  166 (465)
Q Consensus        94 ~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI~~~~~~~-----  166 (465)
                      ...|+...+.-|+..|++..  ++|.++...+..............+.......      -..+.||++--+..+     
T Consensus        16 W~NGi~QN~~fL~~lL~qs~~v~~V~Lvn~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~lDVlIEmg~ql~~~~~   89 (364)
T PF10933_consen   16 WENGINQNCIFLAMLLQQSPRVESVVLVNGGDGNPIPAALMLDLLDVPLVDFDD------AIDELDVLIEMGAQLDPEWL   89 (364)
T ss_pred             hhhchhhHHHHHHHHHhhCCCcceEEEEECCCCCcCCcccccccCCCceecHHH------hcccCCEEEEccCccCHHHH
Confidence            45788888999999999875  79999987654333222211111122111110      134789998766432     


Q ss_pred             hHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhH---HHHH
Q 044542          167 PHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSA---AEVL  243 (465)
Q Consensus       167 ~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~---~~~~  243 (465)
                      ....+++.+ +|....|..+.........   .++.  .            .+    ..-..+|.|.++-+..   ..++
T Consensus        90 ~~~~~~G~K-vV~y~~GndYv~~~E~~lF---~k~~--~------------~~----f~~~~yD~VW~lPq~~~~~~~yl  147 (364)
T PF10933_consen   90 DYMRARGGK-VVSYRCGNDYVMDIESMLF---NKPS--G------------HL----FNGAPYDEVWTLPQFENTCAPYL  147 (364)
T ss_pred             HHHHHcCCe-EEEEeCCchHHHHhhHHhc---CCCC--C------------cc----CCCCCCceeEeccchhhhchHHH
Confidence            222334444 8888888765533222111   1110  0            00    1124567777655432   3345


Q ss_pred             HHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCC-CCcEEEE-EeeccccccCHH---HHHHHHHHhhhcCCC
Q 044542          244 VKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPA-NVSLVMG-VAGRLVRDKGHP---LLYEAFSSITRDHPG  318 (465)
Q Consensus       244 ~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~-~~~~~l~-~~Grl~~~Kg~~---~ll~a~~~l~~~~~~  318 (465)
                      +..+   ...++++|.--++-+++......++-..++|-.+ .....+. |=-++.--|.--   ++.|++-+-   .|+
T Consensus       148 ~~l~---r~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~---~P~  221 (364)
T PF10933_consen  148 ETLH---RCPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRA---DPD  221 (364)
T ss_pred             HHHh---cCCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHh---Chh
Confidence            4433   3667888887666554432221111112233322 1113332 223344445432   233433332   243


Q ss_pred             -eEEEEEeC-Ccchh------HHHHhc----CCeEEcCCCChhHHHHHHHh-cCeEEecccCCCCCcHHHHHHHHcCCeE
Q 044542          319 -VYLLVAGT-GPWGR------RYAELG----QNVKVLGALEAHQLSEFYNA-LDVFVNPTLRPQGLDLTLIEAMHCGRTV  385 (465)
Q Consensus       319 -~~l~ivG~-g~~~~------~~~~l~----~~V~~~g~v~~~~~~~~~~~-aDv~v~ps~~~eg~~~~~~EAma~G~Pv  385 (465)
                       +..+.+-. -..++      .+..+.    ....|.|..   +++.+++. .|++|.-- |.-+....-.||+.-|=|.
T Consensus       222 ~v~~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~tD~VvSHq-WeN~lNYlY~daLyggYPL  297 (364)
T PF10933_consen  222 AVEHVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHTDAVVSHQ-WENPLNYLYYDALYGGYPL  297 (364)
T ss_pred             hcceEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCCCEEEecc-ccchhhHHHHHHHhcCCCc
Confidence             34444443 21111      122222    677888886   66776654 79888643 5456677889999999999


Q ss_pred             EecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542          386 LTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA  446 (465)
Q Consensus       386 I~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  446 (465)
                      |-..      ..+.  +.|+..+. |..+=++++.+++.+-...++...+++++.+.. ++.
T Consensus       298 VHNS------~~l~--d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~-~~p  350 (364)
T PF10933_consen  298 VHNS------PLLK--DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDR-LSP  350 (364)
T ss_pred             ccCc------chhc--ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh-hCC
Confidence            9743      2333  38999999 999999999999887566778888888888766 443

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.91  E-value=0.067  Score=48.46  Aligned_cols=96  Identities=10%  Similarity=0.090  Sum_probs=61.5

Q ss_pred             CCcEEEEEeeccccccCHH--HHHHHHHHhhhcCCCeEEEEEeCCcc--hhHHHHhc-----CCeEEcCCCChhHHHHHH
Q 044542          285 NVSLVMGVAGRLVRDKGHP--LLYEAFSSITRDHPGVYLLVAGTGPW--GRRYAELG-----QNVKVLGALEAHQLSEFY  355 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~~~~l~-----~~V~~~g~v~~~~~~~~~  355 (465)
                      +++++++..|.-.+.|...  .+.+.+..+.+++  ..+++.|.+.+  ++..+.+.     ..+.+.|..+-.++..++
T Consensus       104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali  181 (247)
T PF01075_consen  104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALI  181 (247)
T ss_dssp             TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHH
T ss_pred             cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHH
Confidence            4457777888766777754  4777788887654  77888887665  33333433     268888988889999999


Q ss_pred             HhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          356 NALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       356 ~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      +.||++|.+-    +.  .+-=|.|.|+|+|+-
T Consensus       182 ~~a~~~I~~D----tg--~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  182 SRADLVIGND----TG--PMHLAAALGTPTVAL  208 (247)
T ss_dssp             HTSSEEEEES----SH--HHHHHHHTT--EEEE
T ss_pred             hcCCEEEecC----Ch--HHHHHHHHhCCEEEE
Confidence            9999999742    22  455589999999985

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>PRK14986 glycogen phosphorylase; Provisional

Probab=95.90  E-value=0.045  Score=56.91  Aligned_cols=129  Identities=12%  Similarity=0.064  Sum_probs=95.7

Q ss_pred             EEEEEeeccccccCHHH-HHHH---HHHhhhcC----CCeEEEEEeCCcc-----hhHHHH---hc----------C--C
Q 044542          288 LVMGVAGRLVRDKGHPL-LYEA---FSSITRDH----PGVYLLVAGTGPW-----GRRYAE---LG----------Q--N  339 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~-ll~a---~~~l~~~~----~~~~l~ivG~g~~-----~~~~~~---l~----------~--~  339 (465)
                      +..+++-|+..+|+..+ ++..   +.++++.-    .+..+++.|....     ++.++.   ++          +  +
T Consensus       544 Lfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lk  623 (815)
T PRK14986        544 LFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLK  623 (815)
T ss_pred             ceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCcee
Confidence            77778999999999988 5555   44454431    2478999986311     111221   11          3  7


Q ss_pred             eEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHHH
Q 044542          340 VKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFVE  416 (465)
Q Consensus       340 V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la~  416 (465)
                      |.|+...+-.-...++.++|+-...|.. .|..|++-+-+|.-|.+.+++--|... |+..+  +++|+.+-.+.+++.+
T Consensus       624 VVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nv-Ei~e~vG~eN~~~fG~~~~ev~~  702 (815)
T PRK14986        624 VVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANV-EMLEHVGEENIFIFGNTAEEVEA  702 (815)
T ss_pred             EEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchh-HHHHhcCCCcEEEeCCCHHHHHH
Confidence            9999988777788889999999986652 488999999999999999999988887 77665  7899999876666654


Q ss_pred             H
Q 044542          417 A  417 (465)
Q Consensus       417 ~  417 (465)
                      .
T Consensus       703 ~  703 (815)
T PRK14986        703 L  703 (815)
T ss_pred             H
Confidence            3

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=95.87  E-value=0.27  Score=46.52  Aligned_cols=95  Identities=18%  Similarity=0.171  Sum_probs=63.9

Q ss_pred             cEEEEEeeccccccCHH--HHHHHHHHhhhcCCCeEEEEE-eCCcchhHHHHhc---CCeEEcCCCChhHHHHHHHhcCe
Q 044542          287 SLVMGVAGRLVRDKGHP--LLYEAFSSITRDHPGVYLLVA-GTGPWGRRYAELG---QNVKVLGALEAHQLSEFYNALDV  360 (465)
Q Consensus       287 ~~~l~~~Grl~~~Kg~~--~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aDv  360 (465)
                      +++++..|.-...|...  .+.+.+..+.++  +.++++. |...+.+..+++.   .++.+.|..+-.++..+++.||+
T Consensus       179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l  256 (322)
T PRK10964        179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKA  256 (322)
T ss_pred             CeEEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCE
Confidence            46554555444455544  677777777653  4567775 6444444444443   45778898888999999999999


Q ss_pred             EEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542          361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPN  389 (465)
Q Consensus       361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s~  389 (465)
                      +|-.-   .|   .+-=|.|+|+|+|+-=
T Consensus       257 ~I~nD---SG---p~HlA~A~g~p~valf  279 (322)
T PRK10964        257 VVSVD---TG---LSHLTAALDRPNITLY  279 (322)
T ss_pred             EEecC---Cc---HHHHHHHhCCCEEEEE
Confidence            99742   22   4555899999999853

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.84  E-value=0.45  Score=48.99  Aligned_cols=188  Identities=17%  Similarity=0.204  Sum_probs=111.5

Q ss_pred             hcccCEEEEeChhHHHHHHH-----HhCCCCCCEEEecCCCCCCCccCCccc----------------------------
Q 044542          226 FSSYNQHICISNSAAEVLVK-----IYQLPQRNVHVILNGVDETKFVHDPEA----------------------------  272 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~-----~~~~~~~ki~vi~ngvd~~~~~~~~~~----------------------------  272 (465)
                      +..+..+-.||.--.+.+++     .+.+.++++.-+-|||....+-.....                            
T Consensus       329 l~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~  408 (713)
T PF00343_consen  329 LRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFA  408 (713)
T ss_dssp             HHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGC
T ss_pred             HHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhh
Confidence            45556777888776665543     455667899999999988776432100                            


Q ss_pred             -C-------------------cccccccC--CCCCCcEEEEEeeccccccCHHH-HH---HHHHHhhhc----CCCeEEE
Q 044542          273 -G-------------------VRFPEKLG--VPANVSLVMGVAGRLVRDKGHPL-LY---EAFSSITRD----HPGVYLL  322 (465)
Q Consensus       273 -~-------------------~~~r~~~g--~~~~~~~~l~~~Grl~~~Kg~~~-ll---~a~~~l~~~----~~~~~l~  322 (465)
                       .                   ..++++.|  +.++. +..+++-|+..+|...+ ++   +-+.++++.    ...+.++
T Consensus       409 dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~s-lfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~I  487 (713)
T PF00343_consen  409 DDEEFQEELREVKQENKERLAEYIKKRTGVELDPDS-LFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFI  487 (713)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTS-EEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcch-hhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEE
Confidence             0                   00111223  23343 77789999999999887 33   445555543    1357899


Q ss_pred             EEeCCcc-----hhHHHH---h----------cC--CeEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHc
Q 044542          323 VAGTGPW-----GRRYAE---L----------GQ--NVKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHC  381 (465)
Q Consensus       323 ivG~g~~-----~~~~~~---l----------~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~  381 (465)
                      +.|.-..     ++.++.   +          .+  +|.|+...+-.-...++.++||-+..+.. .|..|++-+-+|.-
T Consensus       488 FaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N  567 (713)
T PF00343_consen  488 FAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN  567 (713)
T ss_dssp             EE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT
T ss_pred             EeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC
Confidence            9996311     122221   1          12  68999998877788889999999996653 48999999999999


Q ss_pred             CCeEEecCCCCcceeeeee--CCceEEeCCCHHHHH
Q 044542          382 GRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFV  415 (465)
Q Consensus       382 G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la  415 (465)
                      |.+.+++--|... |+..+  .++.++|-.+.+++.
T Consensus       568 GaL~lstlDG~ni-Ei~e~vG~eN~fiFG~~~~ev~  602 (713)
T PF00343_consen  568 GALNLSTLDGWNI-EIAEAVGEENIFIFGLTAEEVE  602 (713)
T ss_dssp             T-EEEEESSTCHH-HHHHHH-GGGSEEES-BHHHHH
T ss_pred             CCeEEecccchhH-HHHHhcCCCcEEEcCCCHHHHH
Confidence            9999999888877 66532  567888865555543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=95.74  E-value=0.39  Score=47.90  Aligned_cols=97  Identities=6%  Similarity=-0.095  Sum_probs=62.1

Q ss_pred             CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eee-eeCCceEEeC----C
Q 044542          338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVV-VNEELGYTFS----P  409 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v-~~~~~G~l~~----~  409 (465)
                      .++++.+++|+.+   ++....+..+-+.   |--++++||+.+|+|+|+-...+-..   ..+ ..-+.|+.++    .
T Consensus       338 rg~vv~~W~PQ~~---iL~h~~vg~FitH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~  411 (481)
T PLN02992        338 RGFVVPSWAPQAE---ILAHQAVGGFLTH---CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEV  411 (481)
T ss_pred             CCEEEeecCCHHH---HhCCcccCeeEec---CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCc
Confidence            5688899998766   4556666333332   22359999999999999976543210   123 2345566652    3


Q ss_pred             -CHHHHHHHHHHHHhCC-----hHHHHHHHHHHHHHH
Q 044542          410 -NVKSFVEALELVIRDG-----PKVLQRKGLACKEHA  440 (465)
Q Consensus       410 -d~~~la~~i~~ll~~~-----~~~~~~~~~~~~~~~  440 (465)
                       +.+++.+++.+++.++     .+..+++++.+++.+
T Consensus       412 ~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av  448 (481)
T PLN02992        412 ISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSL  448 (481)
T ss_pred             ccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh
Confidence             7899999999999762     123344555566555

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=95.74  E-value=0.17  Score=47.85  Aligned_cols=125  Identities=12%  Similarity=0.045  Sum_probs=78.0

Q ss_pred             CCcEEEEEeeccccccCH--HHHHHHHHHhhhcCCCeEEEEEeCCc-chhHHHHhc---CCeEEcCCCChhHHHHHHHhc
Q 044542          285 NVSLVMGVAGRLVRDKGH--PLLYEAFSSITRDHPGVYLLVAGTGP-WGRRYAELG---QNVKVLGALEAHQLSEFYNAL  358 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~-~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~a  358 (465)
                      +++++++..|.-.+.|..  +.+.+.+..+.++  +..+++.|.++ +.+..+++.   ++..+.|..+-.++..+++.|
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali~~a  255 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALLAGA  255 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHHHcC
Confidence            345777777765566765  4677777777653  56777774443 333333332   445678988889999999999


Q ss_pred             CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---------eeeeeCCceEEeCC-CHHHHHHHHHHH
Q 044542          359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---------TVVVNEELGYTFSP-NVKSFVEALELV  421 (465)
Q Consensus       359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---------e~v~~~~~G~l~~~-d~~~la~~i~~l  421 (465)
                      |++|.+    ++-  .+==|.|.|+|+|+-=.+..+.         .++. +.   ..+. ++++..+++.++
T Consensus       256 ~l~I~~----DSg--p~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~-~~---~~~~I~~~~V~~ai~~~  318 (319)
T TIGR02193       256 DAVVGV----DTG--LTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALL-GE---SGANPTPDEVLAALEEL  318 (319)
T ss_pred             CEEEeC----CCh--HHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEc-cC---ccCCCCHHHHHHHHHhh
Confidence            999974    332  4444778999999743222211         1111 11   1333 788888877765

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=95.64  E-value=0.12  Score=51.19  Aligned_cols=148  Identities=16%  Similarity=0.161  Sum_probs=99.6

Q ss_pred             eecc-ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCC
Q 044542          293 AGRL-VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL  371 (465)
Q Consensus       293 ~Grl-~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~  371 (465)
                      .|.- .-+||-+..++++.+.    -+++-.|.+...   ....+..-|.-+|.++.+++..+++.+.|+|--..-.|  
T Consensus       283 yGK~~~~w~~k~~~l~~l~~~----~eih~tV~~~~~---~~~~~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~E--  353 (559)
T PF15024_consen  283 YGKERYMWKGKEKYLDVLHKY----MEIHGTVYDEPQ---RPPNVPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYE--  353 (559)
T ss_pred             EccchhhhcCcHHHHHHHHhh----cEEEEEeccCCC---CCcccchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCC--
Confidence            3544 3477888888877654    356666655432   11223355777999999999999999999996332113  


Q ss_pred             cHHHHHHHHcCCeEEecCCCCcce--------------ee---------eeeCCceEEeCC-CHHHHHHHHHHHHhCChH
Q 044542          372 DLTLIEAMHCGRTVLTPNYPSIVR--------------TV---------VVNEELGYTFSP-NVKSFVEALELVIRDGPK  427 (465)
Q Consensus       372 ~~~~~EAma~G~PvI~s~~gg~~~--------------e~---------v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~  427 (465)
                      |-+.+||+|.|+|.|-........              ++         ....-.-+.++. |.+++.+||.+++.++. 
T Consensus       354 gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v-  432 (559)
T PF15024_consen  354 GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATPV-  432 (559)
T ss_pred             CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCC-
Confidence            348999999999988755321110              11         111234567777 99999999999999832 


Q ss_pred             HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          428 VLQRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       428 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                               .-++--.|+.+.|.+++..+++.
T Consensus       433 ---------~Py~P~efT~egmLeRv~~~ie~  455 (559)
T PF15024_consen  433 ---------EPYLPYEFTCEGMLERVNALIEK  455 (559)
T ss_pred             ---------CCcCCcccCHHHHHHHHHHHHHh
Confidence                     23445568999999999877764

>PLN03015 UDP-glucosyl transferase

Probab=95.61  E-value=2.3  Score=42.35  Aligned_cols=109  Identities=6%  Similarity=-0.040  Sum_probs=62.5

Q ss_pred             eEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eee-eeCCceEEeC------C
Q 044542          340 VKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVV-VNEELGYTFS------P  409 (465)
Q Consensus       340 V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v-~~~~~G~l~~------~  409 (465)
                      +.+.+|+|+.++..   ...+..+-++.  | -++++||+.+|+|+|+-..-+-..   ..+ ..-+.|+-+.      .
T Consensus       337 l~v~~W~PQ~~vL~---h~~vg~fvtH~--G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~  410 (470)
T PLN03015        337 LVVTQWAPQVEILS---HRSIGGFLSHC--G-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKV  410 (470)
T ss_pred             eEEEecCCHHHHhc---cCccCeEEecC--C-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCc
Confidence            66779998777544   44453333322  2 258999999999999976532110   111 2224454442      2


Q ss_pred             -CHHHHHHHHHHHHhC----C---hHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Q 044542          410 -NVKSFVEALELVIRD----G---PKVLQRKGLACKEHALSMFTATKMASAYE  454 (465)
Q Consensus       410 -d~~~la~~i~~ll~~----~---~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  454 (465)
                       +.+++.+++++++..    .   ++..+++++.+++.+.+.=|..+..+++.
T Consensus       411 v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~  463 (470)
T PLN03015        411 IGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWA  463 (470)
T ss_pred             cCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence             789999999999952    1   12333455555555554434444344433

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.58  E-value=1.7  Score=39.35  Aligned_cols=117  Identities=13%  Similarity=0.062  Sum_probs=64.5

Q ss_pred             EEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc---C-CeEEcCCCChhHHHHHHHhcCeEEec
Q 044542          289 VMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG---Q-NVKVLGALEAHQLSEFYNALDVFVNP  364 (465)
Q Consensus       289 ~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~---~-~V~~~g~v~~~~~~~~~~~aDv~v~p  364 (465)
                      +|+..|+    |.+..+...    .. ...+...+.-....-+...+++   + -+-+.|..+.+.=..+++...+-++-
T Consensus       132 i~lttG~----k~l~~f~~~----~~-~~~~~~RvLP~~~~l~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lV  202 (256)
T TIGR00715       132 VFLTAGA----SWLSHFSLS----QD-EAVVFVRVLPYPQALAQALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVV  202 (256)
T ss_pred             EEEecCc----chHHHHhhc----cC-CceEEEEECCCchhhHHHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEE
Confidence            4556664    555554331    11 1234444442222223344443   3 34556777766666777765543332


Q ss_pred             ccCC---CCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHH
Q 044542          365 TLRP---QGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI  422 (465)
Q Consensus       365 s~~~---eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll  422 (465)
                      +..+   .|+.-++--|+.+|+|||.-+.+....       .+-.+. +.+++.+.+.+++
T Consensus       203 tK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~-------~~~~~~-~~~el~~~l~~~~  255 (256)
T TIGR00715       203 TKASGEQGGELEKVKAAEALGINVIRIARPQTIP-------GVAIFD-DISQLNQFVARLL  255 (256)
T ss_pred             EcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC-------CCccCC-CHHHHHHHHHHhc
Confidence            3221   256678988999999999988775431       112233 7788877776653

This enzyme was found to be a monomer by gel filtration.

>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes

Probab=95.57  E-value=0.24  Score=40.87  Aligned_cols=129  Identities=18%  Similarity=0.263  Sum_probs=69.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHH-HHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcE
Q 044542           80 LKLAVFSKTWPIGAAPGGMER-HASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDY  158 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~Di  158 (465)
                      |||+++.+.+      ||..+ .+..+++.+   .|+++++|.........   ..+..+.+..      .......+|+
T Consensus         1 M~ILlle~y~------ggSHk~~~~~L~~~~---~~~~~lltLP~r~w~WR---mRg~AL~~a~------~~~~~~~~dl   62 (168)
T PF12038_consen    1 MRILLLEPYY------GGSHKQWADGLAAHS---EHEWTLLTLPARKWHWR---MRGAALYFAQ------QIPLSHSYDL   62 (168)
T ss_pred             CeEEEEcccc------ccCHHHHHHHHHHhc---cCCEEEEEcCCCccccc---cCCCHHHHhh------ccccccCCCE
Confidence            8999999865      55544 344444444   48889998765332211   0000011110      0114566899


Q ss_pred             EEecCC-chhHHhh-----hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEE
Q 044542          159 VHTESV-SLPHWRA-----KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQH  232 (465)
Q Consensus       159 I~~~~~-~~~~~~~-----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  232 (465)
                      |++.+. .+...++     .++| .++.+|+....+              |......+.....+..+    ...-.||.|
T Consensus        63 l~aTsmldLa~l~gL~p~l~~~p-~ilYFHENQl~Y--------------P~~~~~~rd~~~~~~ni----~saLaAD~v  123 (168)
T PF12038_consen   63 LFATSMLDLATLRGLRPDLANVP-KILYFHENQLAY--------------PVSPGQERDFQYGMNNI----YSALAADRV  123 (168)
T ss_pred             EEeeccccHHHHHhhccCCCCCC-EEEEEecCcccC--------------CCCCCccccccHHHHHH----HHHHhceee
Confidence            999875 2332222     2456 899999753321              22222222222222222    234568999


Q ss_pred             EEeChhHHHHHHH
Q 044542          233 ICISNSAAEVLVK  245 (465)
Q Consensus       233 i~~S~~~~~~~~~  245 (465)
                      +..|.+-++.+.+
T Consensus       124 ~FNS~~nr~sFL~  136 (168)
T PF12038_consen  124 VFNSAFNRDSFLD  136 (168)
T ss_pred             eecchhhHHHHHH
Confidence            9999998886655

It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=95.41  E-value=0.1  Score=48.33  Aligned_cols=95  Identities=14%  Similarity=0.111  Sum_probs=66.1

Q ss_pred             EEEEEeeccccccC--HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc------CCeEEcCCCChhHHHHHHHhcC
Q 044542          288 LVMGVAGRLVRDKG--HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG------QNVKVLGALEAHQLSEFYNALD  359 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg--~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~------~~V~~~g~v~~~~~~~~~~~aD  359 (465)
                      ++++..|.-.+.|.  .+.+.++++.+.++  +.+++++|...+.+..+++.      ..+.+.|..+-.|+..+++.||
T Consensus       123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~  200 (279)
T cd03789         123 VVVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARAD  200 (279)
T ss_pred             EEEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCC
Confidence            55556666555554  45778888888765  67888999766555444332      3355678777899999999999


Q ss_pred             eEEecccCCCCCcHHHHHHHHcCCeEEecCC
Q 044542          360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNY  390 (465)
Q Consensus       360 v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~  390 (465)
                      ++|.+-    + | .+--|.+.|+|+|+--.
T Consensus       201 l~I~~D----s-g-~~HlA~a~~~p~i~l~g  225 (279)
T cd03789         201 LVVTND----S-G-PMHLAAALGTPTVALFG  225 (279)
T ss_pred             EEEeeC----C-H-HHHHHHHcCCCEEEEEC
Confidence            999742    2 2 44446799999997543

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=95.23  E-value=0.1  Score=54.39  Aligned_cols=128  Identities=13%  Similarity=0.063  Sum_probs=94.6

Q ss_pred             EEEEEeeccccccCHHH-HHHH---HHHhhhcC----CCeEEEEEeCCcc-----hhHHHH---hc----------C--C
Q 044542          288 LVMGVAGRLVRDKGHPL-LYEA---FSSITRDH----PGVYLLVAGTGPW-----GRRYAE---LG----------Q--N  339 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~-ll~a---~~~l~~~~----~~~~l~ivG~g~~-----~~~~~~---l~----------~--~  339 (465)
                      +..+++-|+..+|+..+ ++..   +.++++.-    .+..+++.|....     ++.++.   ++          +  +
T Consensus       531 lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lk  610 (797)
T cd04300         531 LFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLK  610 (797)
T ss_pred             cEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceE
Confidence            77779999999999988 5544   45554431    2377888886311     111111   11          2  6


Q ss_pred             eEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHHH
Q 044542          340 VKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFVE  416 (465)
Q Consensus       340 V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la~  416 (465)
                      |.|+....-.-...++.+|||-..-|.. .|..|+.-+-+|.-|.+.++|--|... |+.++  ++++++|-.+.++..+
T Consensus       611 VVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanv-Ei~e~vG~eN~fiFG~~~~ev~~  689 (797)
T cd04300         611 VVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIAEEVGEENIFIFGLTAEEVEA  689 (797)
T ss_pred             EEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhH-HHHHHhCcCcEEEeCCCHHHHHH
Confidence            9999988777788899999999986652 488899999999999999999888887 77665  7899999876666654

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN02534 UDP-glycosyltransferase

Probab=95.13  E-value=1.3  Score=44.42  Aligned_cols=114  Identities=12%  Similarity=-0.016  Sum_probs=65.8

Q ss_pred             CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---e-eeeeCCceEEe------
Q 044542          338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---T-VVVNEELGYTF------  407 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e-~v~~~~~G~l~------  407 (465)
                      .++.+.|++|+.+   ++...++..+-+.   |-.++++||+++|+|+|+-...+-..   . ++..-+.|+-+      
T Consensus       344 ~g~~v~~w~pq~~---iL~h~~v~~fvtH---~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~  417 (491)
T PLN02534        344 RGLLIKGWAPQVL---ILSHPAIGGFLTH---CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPV  417 (491)
T ss_pred             CCeeccCCCCHHH---HhcCCccceEEec---CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccc
Confidence            6788889998754   6667777444342   23469999999999999976532110   0 11111122211      


Q ss_pred             --------C-C-CHHHHHHHHHHHHhC----Ch---HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 044542          408 --------S-P-NVKSFVEALELVIRD----GP---KVLQRKGLACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       408 --------~-~-d~~~la~~i~~ll~~----~~---~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                              . . +.+++++++.+++.+    ..   +...++++.+++.+.+.=|..+..+++.+-+
T Consensus       418 ~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i  484 (491)
T PLN02534        418 RWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDV  484 (491)
T ss_pred             cccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence                    0 1 688999999999962    11   1233444555555555444444445444443

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=94.97  E-value=0.32  Score=44.67  Aligned_cols=94  Identities=19%  Similarity=0.203  Sum_probs=60.5

Q ss_pred             CHHHHHHHHHHhhhcCCCeEEEEEeCC-----cchhHHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcH
Q 044542          301 GHPLLYEAFSSITRDHPGVYLLVAGTG-----PWGRRYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDL  373 (465)
Q Consensus       301 g~~~ll~a~~~l~~~~~~~~l~ivG~g-----~~~~~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~  373 (465)
                      ....+++.+..+.+..|+.+++|==..     .....+.++.  .++.+...  .-.+.+++..||.++.-+      +.
T Consensus       138 ~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Ll~~s~~Vvtin------St  209 (269)
T PF05159_consen  138 SQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDD--DVNLYELLEQSDAVVTIN------ST  209 (269)
T ss_pred             cHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECC--CCCHHHHHHhCCEEEEEC------CH
Confidence            455667777777777788887765432     1223344432  44444322  247889999999999743      34


Q ss_pred             HHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC
Q 044542          374 TLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP  409 (465)
Q Consensus       374 ~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~  409 (465)
                      +-+||+.+|+||++...+-.       ...|+..+.
T Consensus       210 vGlEAll~gkpVi~~G~~~Y-------~~~glt~~~  238 (269)
T PF05159_consen  210 VGLEALLHGKPVIVFGRAFY-------AGWGLTDDR  238 (269)
T ss_pred             HHHHHHHcCCceEEecCccc-------CCCCccCcC
Confidence            88999999999999644322       135666655

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family

Probab=94.91  E-value=0.097  Score=45.24  Aligned_cols=43  Identities=19%  Similarity=0.277  Sum_probs=31.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN  129 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~  129 (465)
                      ||||+....     ..  ...-++.|+++|++.||+|.|+++........
T Consensus         1 M~ILlTNDD-----Gi--~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g   43 (196)
T PF01975_consen    1 MRILLTNDD-----GI--DAPGIRALAKALSALGHDVVVVAPDSEQSGTG   43 (196)
T ss_dssp             SEEEEE-SS------T--TSHHHHHHHHHHTTTSSEEEEEEESSSTTTST
T ss_pred             CeEEEEcCC-----CC--CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcc
Confidence            899998874     11  23347889999988899999999987655443

This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=94.62  E-value=1.5  Score=42.52  Aligned_cols=188  Identities=11%  Similarity=0.123  Sum_probs=106.3

Q ss_pred             hcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcc--cccccCCCCCCcEEEEEeecccccc---
Q 044542          226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVR--FPEKLGVPANVSLVMGVAGRLVRDK---  300 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~--~r~~~g~~~~~~~~l~~~Grl~~~K---  300 (465)
                      ..+.|...+.+......+.+-+++..+++.....+-....+.........  .+..++++.+. .+++|.-.+.+..   
T Consensus       146 ~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k-~vIlyaPTfr~~~~~~  224 (388)
T COG1887         146 RNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDK-KVILYAPTFRDNDVLI  224 (388)
T ss_pred             eeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccC-ceEEecCCccCCcccc
Confidence            45667888888888887788788877777666555443333332221111  34455566665 5565877766654   


Q ss_pred             C---HHHH--HHHHHHhhhcCCCeEEEEEeCCcchhHHH---HhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          301 G---HPLL--YEAFSSITRDHPGVYLLVAGTGPWGRRYA---ELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       301 g---~~~l--l~a~~~l~~~~~~~~l~ivG~g~~~~~~~---~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      |   ....  ++++.+...+ .+..+++-=.....+...   +..+.+..+-.  ..++.++|..+|++|.      .++
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~-~~~~ii~k~Hp~is~~~~~~~~~~~~~~~vs~--~~di~dll~~sDiLIT------DyS  295 (388)
T COG1887         225 GTQFFNLDIDIEKLKEKLGE-NEYVIIVKPHPLISDKIDKRYALDDFVLDVSD--NADINDLLLVSDILIT------DYS  295 (388)
T ss_pred             chhhhhhhhhHHHHHHhhcc-CCeEEEEecChhhhhhhhhhhhccceeEeccc--chhHHHHHhhhCEEEe------ech
Confidence            2   2222  2333333221 244444433221111111   11122333222  4899999999999995      245


Q ss_pred             HHHHHHHHcCCeEEecCCCCcce----ee---eeeCCceEEeCCCHHHHHHHHHHHHhC
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVR----TV---VVNEELGYTFSPNVKSFVEALELVIRD  424 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~----e~---v~~~~~G~l~~~d~~~la~~i~~ll~~  424 (465)
                      .++.|+|...+|||-.-.....-    ..   ......|-++. +.+++.++|.....+
T Consensus       296 Sv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~-~~~~li~ai~~~~~~  353 (388)
T COG1887         296 SVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVE-TQEELIDAIKPYDED  353 (388)
T ss_pred             HHHHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccc-cHHHHHHHHHhhhcc
Confidence            59999999999999753221100    00   11223455555 788999999988886

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=94.40  E-value=0.077  Score=55.01  Aligned_cols=129  Identities=13%  Similarity=0.042  Sum_probs=93.9

Q ss_pred             EEEEEeeccccccCHHH-HHHHH---HHhhhcC----CCeEEEEEeCCcc-----hhHHHH---hc----------C--C
Q 044542          288 LVMGVAGRLVRDKGHPL-LYEAF---SSITRDH----PGVYLLVAGTGPW-----GRRYAE---LG----------Q--N  339 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~-ll~a~---~~l~~~~----~~~~l~ivG~g~~-----~~~~~~---l~----------~--~  339 (465)
                      +..+++-|+..+|+..+ ++..+   .++++.-    ....+++.|....     ++.++.   ++          +  +
T Consensus       530 lfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lk  609 (798)
T PRK14985        530 IFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLK  609 (798)
T ss_pred             cchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCcee
Confidence            77778899999999888 65554   4444330    2377888886311     111111   11          2  7


Q ss_pred             eEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHHH
Q 044542          340 VKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFVE  416 (465)
Q Consensus       340 V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la~  416 (465)
                      |.|+....-.-...++.++|+-...|.. .|..|++-+-+|.-|.+.++|--|... |+..+  +++|+.|-.+.+++.+
T Consensus       610 VVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanv-Ei~e~vG~eN~f~fG~~~~ev~~  688 (798)
T PRK14985        610 VVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANV-EIAEQVGEENIFIFGHTVEQVKA  688 (798)
T ss_pred             EEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHH-HHHHHhCcCcEEEeCCCHHHHHH
Confidence            9999988777788899999999986652 488899999999999999999888877 66554  7899999876666554


Q ss_pred             H
Q 044542          417 A  417 (465)
Q Consensus       417 ~  417 (465)
                      .
T Consensus       689 ~  689 (798)
T PRK14985        689 L  689 (798)
T ss_pred             H
Confidence            3

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=94.35  E-value=0.15  Score=52.98  Aligned_cols=128  Identities=14%  Similarity=0.089  Sum_probs=94.4

Q ss_pred             EEEEEeeccccccCHHH-HHHH---HHHhhhcCC-----CeEEEEEeCCcc-----hhHHHH---h----------cC--
Q 044542          288 LVMGVAGRLVRDKGHPL-LYEA---FSSITRDHP-----GVYLLVAGTGPW-----GRRYAE---L----------GQ--  338 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~-ll~a---~~~l~~~~~-----~~~l~ivG~g~~-----~~~~~~---l----------~~--  338 (465)
                      +..+++-|+..+|+..+ ++..   +.++++. |     +..+++.|....     ++.++.   +          .+  
T Consensus       528 lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~l  606 (794)
T TIGR02093       528 IFDVQVKRLHEYKRQLLNVLHVIYLYNRIKED-PPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKL  606 (794)
T ss_pred             cchhhheechhhhHHHHHHhhhHHHHHHHHhC-CCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCce
Confidence            67778899999999988 5554   4445433 3     467888886311     111111   1          13  


Q ss_pred             CeEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHH
Q 044542          339 NVKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFV  415 (465)
Q Consensus       339 ~V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la  415 (465)
                      +|.|+....-.-...++.+||+-..-|.. .|..|+.-+-+|.-|.+.++|--|... |+.++  ++++++|-.+.++..
T Consensus       607 kVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanv-Ei~e~vG~eN~fiFG~~~~ev~  685 (794)
T TIGR02093       607 KVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIREEVGAENIFIFGLTVEEVE  685 (794)
T ss_pred             eEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhH-HHHHHhCcccEEEcCCCHHHHH
Confidence            79999988777788899999999986652 488899999999999999999888887 77665  789999987766666


Q ss_pred             HH
Q 044542          416 EA  417 (465)
Q Consensus       416 ~~  417 (465)
                      +.
T Consensus       686 ~~  687 (794)
T TIGR02093       686 AL  687 (794)
T ss_pred             HH
Confidence            43

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=93.42  E-value=0.43  Score=44.62  Aligned_cols=70  Identities=14%  Similarity=0.151  Sum_probs=48.0

Q ss_pred             hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCC-eEEecCCCCcc-eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542          349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGR-TVLTPNYPSIV-RTVVVNEELGYTFSP-NVKSFVEALE  419 (465)
Q Consensus       349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~-PvI~s~~gg~~-~e~v~~~~~G~l~~~-d~~~la~~i~  419 (465)
                      .+..+.|+.+..++.|.-. ..+..-++|||++|| |||.++.--.+ ++++.=....+.++. +..+|.+.|+
T Consensus       228 ~~~~~~l~~S~FCL~p~G~-~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~  300 (302)
T PF03016_consen  228 SEYMELLRNSKFCLCPRGD-GPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR  300 (302)
T ss_pred             hHHHHhcccCeEEEECCCC-CcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence            5688999999999998743 347889999999998 88887643332 134433455666665 5555544443

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=93.30  E-value=2.2  Score=43.04  Aligned_cols=133  Identities=17%  Similarity=0.097  Sum_probs=73.9

Q ss_pred             EEEEEeecccc-----ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchh-HHHHhc----CCeEEcCCCChhHHHHHHHh
Q 044542          288 LVMGVAGRLVR-----DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGR-RYAELG----QNVKVLGALEAHQLSEFYNA  357 (465)
Q Consensus       288 ~~l~~~Grl~~-----~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~-~~~~l~----~~V~~~g~v~~~~~~~~~~~  357 (465)
                      .+++..|....     .+-...+..+++.+    +++.|++.=.+.... ..+.+.    .+|...+|+|+.++.  +..
T Consensus       279 vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~ll--l~H  352 (496)
T KOG1192|consen  279 VVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLL--LDH  352 (496)
T ss_pred             eEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHh--cCC
Confidence            66667787753     33344555566655    455555554432222 122332    479999999988876  333


Q ss_pred             cCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC--CHHHHHHHHHHHHhCChHHHH
Q 044542          358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP--NVKSFVEALELVIRDGPKVLQ  430 (465)
Q Consensus       358 aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~--d~~~la~~i~~ll~~~~~~~~  430 (465)
                      --+..+-++  -|++ +++|++.+|+|+|+.+.-+    ....+...+..+++...  ....+.+++..++.+ ++..+
T Consensus       353 ~~v~~FvTH--gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~-~~y~~  427 (496)
T KOG1192|consen  353 PAVGGFVTH--GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN-EEYKE  427 (496)
T ss_pred             CcCcEEEEC--Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC-hHHHH
Confidence            323333343  3444 5599999999999644321    11112333444444433  333378888888887 54433

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=92.55  E-value=0.3  Score=41.32  Aligned_cols=36  Identities=17%  Similarity=0.232  Sum_probs=30.4

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCC
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNG  260 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ng  260 (465)
                      ++...+|..++.|+++++.+.+ .|++++++.+..-+
T Consensus       133 W~~~~~D~y~Vase~~~~~l~~-~Gi~~~~I~vtGiP  168 (169)
T PF06925_consen  133 WIHPGVDRYFVASEEVKEELIE-RGIPPERIHVTGIP  168 (169)
T ss_pred             eecCCCCEEEECCHHHHHHHHH-cCCChhHEEEeCcc
Confidence            3346789999999999999999 79999999886543

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P

Probab=92.45  E-value=0.57  Score=44.43  Aligned_cols=105  Identities=20%  Similarity=0.239  Sum_probs=68.6

Q ss_pred             cccccccCCC--CCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHH--------------hc
Q 044542          274 VRFPEKLGVP--ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE--------------LG  337 (465)
Q Consensus       274 ~~~r~~~g~~--~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~--------------l~  337 (465)
                      ..+.+++|++  .++..++..++-  +.--+..++++++...   ..+.+++.++ .-...++.              .+
T Consensus       169 ~~~~~~lg~~~~~~~~~~vslF~Y--e~~~l~~ll~~~~~~~---~pv~llvp~g-~~~~~~~~~~~~~~~~~g~~~~~g  242 (374)
T PF10093_consen  169 AAFLRRLGLPEPEPGALRVSLFCY--ENAALASLLDAWAASP---KPVHLLVPEG-RALNSLAAWLGDALLQAGDSWQRG  242 (374)
T ss_pred             HHHHHHcCCCCCCCCCeEEEEEeC--CchHHHHHHHHHhcCC---CCeEEEecCC-ccHHHHHHHhccccccCccccccC
Confidence            3445556664  122244434442  2223777778777543   3577777664 22222211              11


Q ss_pred             -CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCC
Q 044542          338 -QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNY  390 (465)
Q Consensus       338 -~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~  390 (465)
                       -.+.+++++++++...++..||+-++   ++|-   +.+=|+.+|+|.|=.-.
T Consensus       243 ~l~l~~lPF~~Q~~yD~LLw~cD~NfV---RGED---SfVRAqwAgkPFvWhIY  290 (374)
T PF10093_consen  243 NLTLHVLPFVPQDDYDRLLWACDFNFV---RGED---SFVRAQWAGKPFVWHIY  290 (374)
T ss_pred             CeEEEECCCCCHHHHHHHHHhCccceE---ecch---HHHHHHHhCCCceEecC
Confidence             46788999999999999999999888   6777   89999999999996443

The function is unknown.

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=92.25  E-value=0.24  Score=42.53  Aligned_cols=148  Identities=18%  Similarity=0.165  Sum_probs=66.3

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCC-cccCCcceEEEeecCC-C-ccccCCCCC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHN-DVHQGNLHVHFAANDH-G-SVNLNNDGA  155 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~-~~~~~~~~~  155 (465)
                      +.++++..      .-|--..+..|++.|.++  |+.+.+-+....+.... ........+.+.+... . ..++.+..+
T Consensus        22 ~~iWiHa~------SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~D~~~~~~rfl~~~~   95 (186)
T PF04413_consen   22 PLIWIHAA------SVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPLDFPWAVRRFLDHWR   95 (186)
T ss_dssp             T-EEEE-S------SHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE---SSHHHHHHHHHHH-
T ss_pred             CcEEEEEC------CHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCccCHHHHHHHHHHhC
Confidence            56666642      246567789999999987  78877776654433221 1111122233333221 1 112226778


Q ss_pred             CcEEEecCCc-hhHHh----hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccC
Q 044542          156 FDYVHTESVS-LPHWR----AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYN  230 (465)
Q Consensus       156 ~DiI~~~~~~-~~~~~----~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (465)
                      ||+++..... .+..+    ..++|-+++.-.-.          ....            ..+.++..+.  +..++..|
T Consensus        96 P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls----------~~s~------------~~~~~~~~~~--r~~l~~f~  151 (186)
T PF04413_consen   96 PDLLIWVETELWPNLLREAKRRGIPVVLVNARLS----------ERSF------------RRYRRFPFLF--RPLLSRFD  151 (186)
T ss_dssp             -SEEEEES----HHHHHH-----S-EEEEEE------------------------------------HHH--HHHGGG-S
T ss_pred             CCEEEEEccccCHHHHHHHhhcCCCEEEEeeeec----------cccc------------hhhhhhHHHH--HHHHHhCC
Confidence            9988776542 22222    33567222222210          0000            1111112222  26678999


Q ss_pred             EEEEeChhHHHHHHHHhCCCCCCEEEecC
Q 044542          231 QHICISNSAAEVLVKIYQLPQRNVHVILN  259 (465)
Q Consensus       231 ~ii~~S~~~~~~~~~~~~~~~~ki~vi~n  259 (465)
                      .|.+.|+..++.+.+ .|.+++++.+..|
T Consensus       152 ~i~aqs~~da~r~~~-lG~~~~~v~v~Gn  179 (186)
T PF04413_consen  152 RILAQSEADAERFRK-LGAPPERVHVTGN  179 (186)
T ss_dssp             EEEESSHHHHHHHHT-TT-S--SEEE---
T ss_pred             EEEECCHHHHHHHHH-cCCCcceEEEeCc
Confidence            999999999999999 7999999999887

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.93  E-value=1.6  Score=39.34  Aligned_cols=112  Identities=17%  Similarity=0.173  Sum_probs=69.3

Q ss_pred             CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceee-------eeeCCceEEeCCC
Q 044542          338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTV-------VVNEELGYTFSPN  410 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~-------v~~~~~G~l~~~d  410 (465)
                      -+|..++++|+++..+++..||+-++   ++|.   +.+-|..+|+|.+=.=.+--. +.       .-+..++.+    
T Consensus       238 lrvvklPFvpqddyd~LL~lcD~n~V---RGED---SFVRAq~agkPflWHIYpQde-ntHl~KLeaFldky~~~l----  306 (370)
T COG4394         238 LRVVKLPFVPQDDYDELLWLCDFNLV---RGED---SFVRAQLAGKPFLWHIYPQDE-NTHLAKLEAFLDKYCPFL----  306 (370)
T ss_pred             eEEEEecCCcHhHHHHHHHhccccee---ecch---HHHHHHHcCCCcEEEecCCcc-ccHHHHHHHHHHHhCCCC----
Confidence            46777899999999999999999887   5666   889999999999864433221 11       011112222    


Q ss_pred             HHHHHHHHHHHHhC---Ch---------HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          411 VKSFVEALELVIRD---GP---------KVLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       411 ~~~la~~i~~ll~~---~~---------~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      +.+.++++..+..+   .+         .....+.+.+.++....+-....++++.+++++.
T Consensus       307 p~~~a~alrt~~~~~N~~~ls~~w~~f~~~~~~~r~~a~~wa~~l~~~~dlaekLvaF~ek~  368 (370)
T COG4394         307 PPNTAKALRTFWIAWNAGRLSDDWSYFFKNLKEWREHAKKWANHLIKNPDLAEKLVAFIEKI  368 (370)
T ss_pred             CHHHHHHHHHHHHHhcCCcccccHHHHHHhhHHHHHHHHHHHHHHccCccHHHHHHHHHHHh
Confidence            23334444433321   01         1233455566666666666667777888877764

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=91.57  E-value=1.2  Score=44.09  Aligned_cols=44  Identities=27%  Similarity=0.367  Sum_probs=31.9

Q ss_pred             cccccCCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542           69 NKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP  122 (465)
Q Consensus        69 ~~l~~~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  122 (465)
                      -+++.+-..+.|||++.          ||.+-.-..|++.|.++|++|+++...
T Consensus       110 ~~~~~~~~~~~mkILVT----------GatGFIGs~Lv~~Ll~~G~~V~~ldr~  153 (436)
T PLN02166        110 GRVPVGIGRKRLRIVVT----------GGAGFVGSHLVDKLIGRGDEVIVIDNF  153 (436)
T ss_pred             CCCCcccccCCCEEEEE----------CCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34455556677999887          444445668999999999999988643

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2

Probab=91.19  E-value=2.4  Score=41.67  Aligned_cols=149  Identities=13%  Similarity=0.055  Sum_probs=76.1

Q ss_pred             eEEEEeCC-C------CCCCCCChHHHHHHHHHHHHHhC--------Cc----EEEEEeCCCCCCCCC------c-c-cC
Q 044542           81 KLAVFSKT-W------PIGAAPGGMERHASTLYHALAAR--------GH----EIHVFTAPSDRKPHN------D-V-HQ  133 (465)
Q Consensus        81 kIl~v~~~-~------p~~~~~gG~~~~~~~l~~~L~~~--------G~----~V~v~~~~~~~~~~~------~-~-~~  133 (465)
                      +|+++++. |      -..|..||--.++..++++|.+.        |-    +|.++|.--.+....      + . ..
T Consensus       274 ~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt  353 (550)
T PF00862_consen  274 NVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGT  353 (550)
T ss_dssp             EEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEETTE
T ss_pred             EEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccCCC
Confidence            89999863 2      11247799889999999999752        43    477777644333221      1 1 11


Q ss_pred             CcceE-EEeecCC-----------CccccC--------------CCCCCcEEEecCC--ch-hHHh--hhcCCcEEEEec
Q 044542          134 GNLHV-HFAANDH-----------GSVNLN--------------NDGAFDYVHTESV--SL-PHWR--AKMVPNVAVTWH  182 (465)
Q Consensus       134 ~~~~v-~~~~~~~-----------~~~~~~--------------~~~~~DiI~~~~~--~~-~~~~--~~~~p~~v~~~h  182 (465)
                      .+..| +......           ..|.+.              ....||+||.|..  .+ +..+  +.++| ...+-|
T Consensus       354 ~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~-~~~iaH  432 (550)
T PF00862_consen  354 ENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKLGVT-QCFIAH  432 (550)
T ss_dssp             SSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-E-EEEE-S
T ss_pred             CCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCc-eehhhh
Confidence            11222 2221111           123333              3578999999964  22 2222  34667 888889


Q ss_pred             chhHHHHh-hhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHH
Q 044542          183 GIWYEVMH-SKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAE  241 (465)
Q Consensus       183 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~  241 (465)
                      ...-.-+. ++.+           ..-...-+....++..+...+..+|.||+-+.....
T Consensus       433 sLek~Ky~~s~~~-----------w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~  481 (550)
T PF00862_consen  433 SLEKTKYEDSDLY-----------WKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIA  481 (550)
T ss_dssp             S-HHHHHHTTTTT-----------SHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred             ccccccccccCCC-----------HHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhc
Confidence            76432211 1111           111124556666777777889999999987755443

4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=91.03  E-value=1.7  Score=41.55  Aligned_cols=94  Identities=11%  Similarity=0.081  Sum_probs=62.6

Q ss_pred             cEEEEEeeccccccCH--HHHHHHHHHhhhcCCCeEEEEEeCCc--chhHHHHhc-----C-CeEEcCCCChhHHHHHHH
Q 044542          287 SLVMGVAGRLVRDKGH--PLLYEAFSSITRDHPGVYLLVAGTGP--WGRRYAELG-----Q-NVKVLGALEAHQLSEFYN  356 (465)
Q Consensus       287 ~~~l~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~l~-----~-~V~~~g~v~~~~~~~~~~  356 (465)
                      +++++..|.-.+.|..  +.+.+.++.+.++  +..+++.|.+.  +.+..+++.     . .+.+.|..+-.++..+++
T Consensus       182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~--~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~  259 (344)
T TIGR02201       182 NYIVIQPTSRWFFKCWDNDRFSALIDALHAR--GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALID  259 (344)
T ss_pred             CEEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHH
Confidence            3666566665455553  4666777777653  56788888643  222233332     2 345788888899999999


Q ss_pred             hcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      .||++|-+    ++-  .+==|.|.|+|+|+-
T Consensus       260 ~a~l~Vs~----DSG--p~HlAaA~g~p~v~L  285 (344)
T TIGR02201       260 HARLFIGV----DSV--PMHMAAALGTPLVAL  285 (344)
T ss_pred             hCCEEEec----CCH--HHHHHHHcCCCEEEE
Confidence            99999974    222  455589999999974

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PLN02206 UDP-glucuronate decarboxylase

Probab=90.08  E-value=1.9  Score=42.79  Aligned_cols=42  Identities=31%  Similarity=0.392  Sum_probs=30.2

Q ss_pred             ccccCCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542           70 KLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA  121 (465)
Q Consensus        70 ~l~~~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~  121 (465)
                      ++.++...+.|||++.          ||.+-.=..|++.|.++|++|.++..
T Consensus       110 ~~~~~~~~~~~kILVT----------GatGfIGs~Lv~~Ll~~G~~V~~ld~  151 (442)
T PLN02206        110 KIPLGLKRKGLRVVVT----------GGAGFVGSHLVDRLMARGDSVIVVDN  151 (442)
T ss_pred             cCccccccCCCEEEEE----------CcccHHHHHHHHHHHHCcCEEEEEeC
Confidence            3445556677998886          34444556788999999999998753

>PRK13932 stationary phase survival protein SurE; Provisional

Probab=88.94  E-value=1.8  Score=39.04  Aligned_cols=43  Identities=14%  Similarity=0.194  Sum_probs=30.1

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH  128 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  128 (465)
                      ++||||+....   |-.    ..-+..|+++|.+.| +|+|+++.......
T Consensus         4 ~~M~ILltNDD---Gi~----a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~   46 (257)
T PRK13932          4 KKPHILVCNDD---GIE----GEGIHVLAASMKKIG-RVTVVAPAEPHSGM   46 (257)
T ss_pred             CCCEEEEECCC---CCC----CHHHHHHHHHHHhCC-CEEEEcCCCCCCCC
Confidence            46899987754   111    223678889998887 89999988765443

>COG0496 SurE Predicted acid phosphatase [General function prediction only]

Probab=88.54  E-value=1.7  Score=38.87  Aligned_cols=41  Identities=15%  Similarity=0.258  Sum_probs=29.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH  128 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  128 (465)
                      ||||+....       |=...-+..|+++|+ .+++|+|+++.......
T Consensus         1 mrILlTNDD-------Gi~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~   41 (252)
T COG0496           1 MRILLTNDD-------GIHAPGIRALARALR-EGADVTVVAPDREQSGA   41 (252)
T ss_pred             CeEEEecCC-------ccCCHHHHHHHHHHh-hCCCEEEEccCCCCccc
Confidence            799987764       222233678899998 78999999998765543

>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family

Probab=88.47  E-value=2  Score=40.47  Aligned_cols=83  Identities=22%  Similarity=0.227  Sum_probs=58.6

Q ss_pred             cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHH--------------hc-CCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          298 RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAE--------------LG-QNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       298 ~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~--------------l~-~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      +.-.+..++++++...   ..+.+++-.+ .-...+..              .+ -.+.+++++++++...++-.||+-+
T Consensus       191 e~~al~~ll~~~~~~~---~pv~lLvp~G-r~~~~v~~~l~~~~~~~g~~~~~g~L~~~~LPf~~Q~~yD~LLW~cD~Nf  266 (371)
T TIGR03837       191 ENAALPALLDALAQSG---SPVHLLVPEG-RALAAVAAWLGDALLAAGDVHRRGALTVAVLPFVPQDDYDRLLWACDLNF  266 (371)
T ss_pred             CChhHHHHHHHHHhCC---CCeEEEecCC-ccHHHHHHHhCccccCCccccccCceEEEEcCCCChhhHHHHHHhChhcE
Confidence            3445778888887653   3466555442 22222211              11 4678899999999999999999988


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCC
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNY  390 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~  390 (465)
                      +   ++|-   +.+-|..+|+|.|=--.
T Consensus       267 V---RGED---SFVRAqWAgkPfvWhIY  288 (371)
T TIGR03837       267 V---RGED---SFVRAQWAGKPFVWHIY  288 (371)
T ss_pred             e---echh---HHHHHHHcCCCceeecc
Confidence            8   6777   89999999999996433

This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=87.00  E-value=1.1  Score=33.76  Aligned_cols=45  Identities=11%  Similarity=0.019  Sum_probs=31.4

Q ss_pred             HHHHHHHhcCeEEecccCC--CCCcHHHHHHHHcCCeEEecCCCCcc
Q 044542          350 QLSEFYNALDVFVNPTLRP--QGLDLTLIEAMHCGRTVLTPNYPSIV  394 (465)
Q Consensus       350 ~~~~~~~~aDv~v~ps~~~--eg~~~~~~EAma~G~PvI~s~~gg~~  394 (465)
                      .+...+..+|++|+++.+-  ...-.+--+|-..|+|++.++..|..
T Consensus        41 ~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~   87 (97)
T PF10087_consen   41 RLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVS   87 (97)
T ss_pred             HHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHH
Confidence            4899999999999976431  11223445667889999998865543

>TIGR00087 surE 5'/3'-nucleotidase SurE

Probab=84.02  E-value=4.7  Score=36.25  Aligned_cols=41  Identities=24%  Similarity=0.367  Sum_probs=29.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH  128 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  128 (465)
                      ||||+....       |=...-++.|+++|++.| +|+|+++.......
T Consensus         1 M~ILltNDD-------Gi~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~   41 (244)
T TIGR00087         1 MKILLTNDD-------GIHSPGIRALYQALKELG-EVTVVAPARQRSGT   41 (244)
T ss_pred             CeEEEECCC-------CCCCHhHHHHHHHHHhCC-CEEEEeCCCCcccc
Confidence            799977653       222234788999999988 99999988765443

E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.

>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6

Probab=83.70  E-value=1.3  Score=34.65  Aligned_cols=43  Identities=19%  Similarity=0.221  Sum_probs=26.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR  125 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  125 (465)
                      |||+++....-. -...+  .....|+.+..++||+|.++...+-.
T Consensus         1 Mki~fvmDpi~~-i~~~k--DTT~alm~eAq~RGhev~~~~~~dL~   43 (119)
T PF02951_consen    1 MKIAFVMDPIES-IKPYK--DTTFALMLEAQRRGHEVFYYEPGDLS   43 (119)
T ss_dssp             -EEEEEES-GGG---TTT---HHHHHHHHHHHTT-EEEEE-GGGEE
T ss_pred             CeEEEEeCCHHH-CCCCC--ChHHHHHHHHHHCCCEEEEEEcCcEE
Confidence            799999974311 12222  23567888889999999999887643

3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=82.93  E-value=1.9  Score=34.73  Aligned_cols=29  Identities=34%  Similarity=0.442  Sum_probs=23.7

Q ss_pred             CChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           95 PGGMERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      .+|.-.-...++++|.++||||.+.+...
T Consensus         8 t~Ghv~P~lala~~L~~rGh~V~~~~~~~   36 (139)
T PF03033_consen    8 TRGHVYPFLALARALRRRGHEVRLATPPD   36 (139)
T ss_dssp             SHHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred             ChhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence            46766778899999999999999888765

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....

>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional

Probab=82.75  E-value=6  Score=35.64  Aligned_cols=41  Identities=15%  Similarity=0.207  Sum_probs=29.2

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH  128 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  128 (465)
                      ||||+....       |=...-+..|+++|.+. ++|+|+++.......
T Consensus         1 M~ILlTNDD-------Gi~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~   41 (250)
T PRK00346          1 MRILLTNDD-------GIHAPGIRALAEALREL-ADVTVVAPDRERSGA   41 (250)
T ss_pred             CeEEEECCC-------CCCChhHHHHHHHHHhC-CCEEEEeCCCCCcCC
Confidence            789887764       11122377889999988 799999998765443

>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1

Probab=82.70  E-value=4.4  Score=33.32  Aligned_cols=41  Identities=15%  Similarity=0.252  Sum_probs=31.4

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      |||++|....   ...|-....+..+++.+.+.|+++.++...+
T Consensus         1 Mkilii~gS~---r~~~~t~~l~~~~~~~l~~~g~e~~~i~l~~   41 (152)
T PF03358_consen    1 MKILIINGSP---RKNSNTRKLAEAVAEQLEEAGAEVEVIDLAD   41 (152)
T ss_dssp             -EEEEEESSS---STTSHHHHHHHHHHHHHHHTTEEEEEEECTT
T ss_pred             CEEEEEECcC---CCCCHHHHHHHHHHHHHHHcCCEEEEEeccc
Confidence            8999999873   2346666778888888888899999997665

5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=80.39  E-value=14  Score=30.02  Aligned_cols=93  Identities=13%  Similarity=0.138  Sum_probs=55.7

Q ss_pred             EEEEEeeccccccCHHHHHHH------HHHhhhcCCCeEEEEEeCCc----c-hhHHHHhcCCeEEcCCCChhHHHHHHH
Q 044542          288 LVMGVAGRLVRDKGHPLLYEA------FSSITRDHPGVYLLVAGTGP----W-GRRYAELGQNVKVLGALEAHQLSEFYN  356 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~ll~a------~~~l~~~~~~~~l~ivG~g~----~-~~~~~~l~~~V~~~g~v~~~~~~~~~~  356 (465)
                      -+++.+|.-.    +|.++.+      ...|.+.+-.--++=.|.|.    . .+... ......+.|+-=...+.+.++
T Consensus         5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~-k~~gl~id~y~f~psl~e~I~   79 (170)
T KOG3349|consen    5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIR-KNGGLTIDGYDFSPSLTEDIR   79 (170)
T ss_pred             EEEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhc-ccCCeEEEEEecCccHHHHHh
Confidence            4566777533    6666643      35555554322233367661    1 11121 224455555443367889999


Q ss_pred             hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCC
Q 044542          357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNY  390 (465)
Q Consensus       357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~  390 (465)
                      .||++|-..  +.|   +++|.+..|+|.|+--.
T Consensus        80 ~AdlVIsHA--GaG---S~letL~l~KPlivVvN  108 (170)
T KOG3349|consen   80 SADLVISHA--GAG---SCLETLRLGKPLIVVVN  108 (170)
T ss_pred             hccEEEecC--Ccc---hHHHHHHcCCCEEEEeC
Confidence            999999633  344   89999999999987543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	465
3okc_A	394	Crystal Structure Of Corynebacterium Glutamicum Pim		5e-08
3oka_A	381	Crystal Structure Of Corynebacterium Glutamicum Pim		5e-08

>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 259 NGVDETKFV-HDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP 317
           +GVD  +F    PE      +KLG   + + V+    RLV  KG   L +A   +    P
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARP 228
Query: 318 GVYLLVAGTGPWG---RRYA-ELGQNVKVLGALEAHQLSEFYNALDVFVNPT------LR 367
              LL+ G+G +    RR A ++ QNVK LG LE   +     A D+F  P       L 
Sbjct: 229 DAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLD 288
Query: 368 PQGLDLTLIEAMHCGRTVL 386
            +GL +  +EA  CG  V+
Sbjct: 289 VEGLGIVYLEAQACGVPVI 307

>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 259 NGVDETKFV-HDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP 317
           +GVD  +F    PE      +KLG   + + V+    RLV  KG   L +A   +    P
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARP 228
Query: 318 GVYLLVAGTGPWG---RRYA-ELGQNVKVLGALEAHQLSEFYNALDVFVNPT------LR 367
              LL+ G+G +    RR A ++ QNVK LG LE   +     A D+F  P       L 
Sbjct: 229 DAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLD 288
Query: 368 PQGLDLTLIEAMHCGRTVL 386
            +GL +  +EA  CG  V+
Sbjct: 289 VEGLGIVYLEAQACGVPVI 307

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	465
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	1e-43
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	3e-43
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	8e-42
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	5e-37
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	1e-36
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	2e-34
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	2e-26
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	7e-22
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	7e-22
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	1e-21
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	1e-21
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	3e-18
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	4e-16
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	4e-08
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  157 bits (398), Expect = 1e-43
 Identities = 69/392 (17%), Positives = 135/392 (34%), Gaps = 70/392 (17%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVH------FAANDHGSVN 149
           GG     + L   LA RGHEIH  T+    +   +    N++ H      ++   +   +
Sbjct: 27  GGSGVVGTELGKQLAERGHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSVFQYPPYD 84

Query: 150 LN---------NDGAFDYVHTESVSLPHWRA---------KMVPNVAVTWHGIWYEVMHS 191
           L               D +H    ++PH            + +  V  T HG    V+ S
Sbjct: 85  LALASKMAEVAQRENLDILHVHY-AIPHAICAYLAKQMIGERIKIV-TTLHGTDITVLGS 142

Query: 192 KLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQ 251
                            +  L        D +           +S+S      ++ + P 
Sbjct: 143 DPS--------------LNNLIRFGIEQSDVV---------TAVSHSLINETHELVK-PN 178

Query: 252 RNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSS 311
           +++  + N +DE  +       ++  ++ G+  +   ++       + K    + +AF+ 
Sbjct: 179 KDIQTVYNFIDERVYFKRDMTQLK--KEYGISES-EKILIHISNFRKVKRVQDVVQAFAK 235

Query: 312 ITRDHPGVYLLVAGTGPWGRRY----AELG--QNVKVLGALEAHQLSEFYNALDVFVNPT 365
           I  +     LL+ G GP           L     V  LG  +   ++E     D+ +  +
Sbjct: 236 IVTEVD-AKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQD--NVAELLAMSDLMLLLS 292

Query: 366 LR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIR 423
            +   G  L L+EAM CG   +      I   V+ + + GY     +     +    +++
Sbjct: 293 EKESFG--LVLLEAMACGVPCIGTRVGGI-PEVIQHGDTGYLCEVGDTTGVADQAIQLLK 349

Query: 424 DGPKVLQRKGLACKEHALSMFTATKMASAYER 455
           D  ++ +  G   +E     F + K+ S YE 
Sbjct: 350 D-EELHRNMGERARESVYEQFRSEKIVSQYET 380

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score =  155 bits (395), Expect = 3e-43
 Identities = 84/414 (20%), Positives = 124/414 (29%), Gaps = 74/414 (17%)

Query: 78  EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLH 137
              K  V +  +P     GG++ +              +   T  ++     D       
Sbjct: 3   ASRKTLVVTNDFP--PRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLD-YE 59

Query: 138 VHFAANDHGSVNLNN------------DGAFDYVHT---ESVSLPHWRAK--MVPNVAVT 180
           V        SV L              +   D V       ++L    AK      V  +
Sbjct: 60  VI---RWPRSVMLPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIAS 116

Query: 181 WHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAA 240
            HG   EV  S L            PGS   L++     VD +           IS    
Sbjct: 117 THGH--EVGWSML------------PGSRQSLRKIG-TEVDVL---------TYISQYTL 152

Query: 241 EVLVKIYQLPQRNVHVILNGVDETKFV-HDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD 299
                 +         + +GVD  +F    PE      +KLG      ++     RLV  
Sbjct: 153 RRFKSAFGSHPT-FEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACN-SRLVPR 210

Query: 300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRY----AELGQNVKVLGALEAHQLSEFY 355
           KG   L +A   +    P   LL+ G+G +         ++ QNVK LG LE   +    
Sbjct: 211 KGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTL 270

Query: 356 NALDVFVNPTLRPQ------GLDLTLIEAMHCGRTVLTPNYPSIVRTV-----VVNEELG 404
            A D+F  P           GL +  +EA  CG        P I  T       V    G
Sbjct: 271 AAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-------PVIAGTSGGAPETVTPATG 323

Query: 405 YTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF 457
                 +V    E L  ++ D P      G A + H  + ++   M        
Sbjct: 324 LVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAEWSWEIMGERLTNIL 376

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score =  151 bits (384), Expect = 8e-42
 Identities = 59/398 (14%), Positives = 114/398 (28%), Gaps = 52/398 (13%)

Query: 81  KLAVFSKTWPIGAAP-GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVH 139
            +A     +     P GG++R    +   +AARGH + V+T   +           + V 
Sbjct: 2   IVAFCLYKYF----PFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVK 57

Query: 140 FAAND-------HGSVNLNNDGAFDYVH--TESVSLPHWRAKMVPNVAVTWHGIWYEVMH 190
              N            N   +   D V    +   L  + A      A   +        
Sbjct: 58  SHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFA------ADVCYAEKVAQEK 111

Query: 191 SKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLP 250
             L+              +T                    + + +++       K YQ  
Sbjct: 112 GFLYR-------------LTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTE 158

Query: 251 QRNVHVILNGVDETKFVH--DPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEA 308
                ++  G+   +      P +   + +K G+      ++   G     KG     EA
Sbjct: 159 PERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQ-QNLLLQVGSDFGRKGVDRSIEA 217

Query: 309 FSSITRDHPGVYLLVAGTGPWGRRY----AELG--QNVKVLGALEAHQLSEFYNALDVFV 362
            +S+        LL        R++     +LG   NV          +SE   A D+ +
Sbjct: 218 LASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRN--DVSELMAAADLLL 275

Query: 363 NPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP--NVKSFVEALE 419
           +P  +   G  + L+EA+  G  VLT          + +   G   +   + +   E L 
Sbjct: 276 HPAYQEAAG--IVLLEAITAGLPVLTTAVCGY-AHYIADANCGTVIAEPFSQEQLNEVLR 332

Query: 420 LVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF 457
             +     +        + +A +      +        
Sbjct: 333 KALTQ-SPLRMAWAENARHYADT-QDLYSLPEKAADII 368

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score =  139 bits (352), Expect = 5e-37
 Identities = 75/425 (17%), Positives = 128/425 (30%), Gaps = 93/425 (21%)

Query: 76  TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD-------RKPH 128
             +       + T    +  GG+     +L   L + G E   F            +  H
Sbjct: 37  KLKGRSFVHVNST----SFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFH 92

Query: 129 NDVHQGNLHVHFAANDHG---SVNLNN-----DGAFDYVHTESVSLPHW----RAKMVPN 176
           N   QGN  +           +VN  N       +FDYV       P        K  P 
Sbjct: 93  N-ALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHD-PQPAALIEFYEKKSPW 150

Query: 177 VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICIS 236
           +    H                                      + +R F          
Sbjct: 151 L-WRCHIDLSS---------------------------PNREFWEFLRRFVEKYDRYIFH 182

Query: 237 NSAAEVLVKIYQLPQRNVHVILNGVDETKF---VHDPEAGVRFPEKLGVPANVSLVMGVA 293
                  V+  +L +    ++   +D              +R  E+  V     ++  V 
Sbjct: 183 LPEY---VQ-PELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQV- 237

Query: 294 GRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG------------RRYAE---LGQ 338
            R    KG   + E +  +    PGV LL+ G                 R+  E   +  
Sbjct: 238 SRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKV 297

Query: 339 NVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI----- 393
              ++G + A +++ F  A DV +  ++R +G  LT+ EAM  G+       P I     
Sbjct: 298 LTNLIG-VHAREVNAFQRASDVILQMSIR-EGFGLTVTEAMWKGK-------PVIGRAVG 348

Query: 394 -VRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA 452
            ++  +V+ E G+    +    VE +  +++  P+V +  G   KE     F  TK    
Sbjct: 349 GIKFQIVDGETGFLV-RDANEAVEVVLYLLKH-PEVSKEMGAKAKERVRKNFIITKHMER 406

Query: 453 YERFF 457
           Y    
Sbjct: 407 YLDIL 411

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score =  138 bits (351), Expect = 1e-36
 Identities = 80/427 (18%), Positives = 148/427 (34%), Gaps = 64/427 (14%)

Query: 75  PTFEKLKLAVFSKTWPIGAAP-----GGMERHASTLYHALAARGHEIHVFT-APSDRKPH 128
           P    +++A+ S        P     GGM  +  +    LA +G E+ ++T A    +  
Sbjct: 16  PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE 75

Query: 129 NDVHQGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVA--VTWHGIWY 186
                 NL V   A           G ++ +  E   LP   A     +        + Y
Sbjct: 76  IVRVAENLRVINIA----------AGPYEGLSKEE--LPTQLAAFTGGMLSFTRREKVTY 123

Query: 187 EVMH-----SKLFGELFSNQNGV--------------LPGSMTELQEAMPRLVDEIRFFS 227
           +++H     S   G L  +   +                   ++  E+  R + E +   
Sbjct: 124 DLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVD 183

Query: 228 SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKF-VHDPEAGVRFPEKLGVPANV 286
           + +     +    + L+  Y      + V+  G D   +   +  A  R   +LG+P + 
Sbjct: 184 NADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHT 243

Query: 287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL-LVAGTGPWGRRYAE---------- 335
            +V    GRL   KG  +L +A +++    P   L ++   GP G               
Sbjct: 244 KVVA-FVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEEL 302

Query: 336 -LGQNVKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSI 393
            + + ++ L      +L   Y A D+   P+     G  L  +EA   G  V+      +
Sbjct: 303 GVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFG--LVAMEAQASGTPVIAARVGGL 360

Query: 394 VRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT----ATK 448
               V   E G      +  ++ +AL  ++ D  +   R G    EHA + F+    A +
Sbjct: 361 -PIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGEDAVEHART-FSWAATAAQ 417

Query: 449 MASAYER 455
           ++S Y  
Sbjct: 418 LSSLYND 424

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score =  132 bits (333), Expect = 2e-34
 Identities = 72/399 (18%), Positives = 134/399 (33%), Gaps = 64/399 (16%)

Query: 80  LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVH 139
           +++ +          PGG++ H   L   L   GHE+ V    S      D         
Sbjct: 21  MRIGMVCPYSF--DVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAV 78

Query: 140 FAANDHGSVNLN-------------NDGAFDYVH-----TESVSLPHWRAKMVPNVAVTW 181
               +     L               +G FD +H       S+S+   +A   P VA T+
Sbjct: 79  PIPYNGSVARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVA-TF 137

Query: 182 HGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAE 241
           H    + +   +F  +              L+    +++            I +S+ A  
Sbjct: 138 HTSTTKSLTLSVFQGI--------------LRPYHEKIIGR----------IAVSDLARR 173

Query: 242 VLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD-K 300
             ++       +   I NGVD   F   P          G P     V+ + GR     K
Sbjct: 174 WQMEAL---GSDAVEIPNGVDVASFADAPLL-------DGYPREGRTVLFL-GRYDEPRK 222

Query: 301 GHPLLYEAFSSITRDHPGVYLLVAGTGPWG---RRYAELGQNVKVLGALEAHQLSEFYNA 357
           G  +L  A   +    P V +L+ G G       +  +L  +++ LG ++    +    +
Sbjct: 223 GMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAMRS 282

Query: 358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVE 416
            DV+  P L  +   + L+EAM  G  V+  +  +  R V+ + + G      +      
Sbjct: 283 ADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAF-RRVLADGDAGRLVPVDDADGMAA 341

Query: 417 ALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYER 455
           AL  ++ D  ++         E     +  + +++   R
Sbjct: 342 ALIGILED-DQLRAGYVARASERVHR-YDWSVVSAQIMR 378

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score =  108 bits (271), Expect = 2e-26
 Identities = 45/381 (11%), Positives = 85/381 (22%), Gaps = 101/381 (26%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDV------HQGNLHVHFAANDHGSVN 149
           GG++   + L   L   GHE+ +  AP        +          +       D     
Sbjct: 30  GGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVVPAGEPEEIERWLRTAD----- 84

Query: 150 LNNDGAFDYVH--TESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPG 207
                  D VH  +  V  P            + H                         
Sbjct: 85  ------VDVVHDHSGGVIGPAGLPPGTA-FISSHHF------------------------ 113

Query: 208 SMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV 267
                      +      +SS  Q                     +  VI   VD  ++ 
Sbjct: 114 -------TTRPVNPVGCTYSSRAQRAHCGGG-------------DDAPVIPIPVDPARYR 153

Query: 268 HDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG 327
              +   +              +   GR+   KG                G  L++AG  
Sbjct: 154 SAADQVAKED-----------FLLFMGRVSPHKGALEAAAFA-----HACGRRLVLAGPA 197

Query: 328 P----WGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD---------LT 374
                +       G  V+ +G +   +  +   +    +  +    G             
Sbjct: 198 WEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATV 257

Query: 375 LIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGL 434
           + EA   G  V+      +   V     +G           +     +   P        
Sbjct: 258 VSEAAVSGTPVVGTGNGCLAEIV---PSVGEVVGYGTDFAPDEARRTLAGLPASD----- 309

Query: 435 ACKEHALSMFTATKMASAYER 455
             +  A+ ++    +A  Y  
Sbjct: 310 EVRRAAVRLWGHVTIAERYVE 330

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score = 91.5 bits (228), Expect = 7e-22
 Identities = 40/198 (20%), Positives = 69/198 (34%), Gaps = 35/198 (17%)

Query: 252 RNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSS 311
            + H   + V+ +KF                            R+  +K   L  E F  
Sbjct: 3   HHHHHHSHPVETSKFKFKCYGDFWL---------------SVNRIYPEKRIELQLEVFKK 47

Query: 312 ITRDHPGVYLLVAGTGPWGRRYAEL--------GQNVKVLGALEAHQLSEFYNALDVFVN 363
           +        L + G    G                NVK LG++   +L + Y+     + 
Sbjct: 48  L----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLC 103

Query: 364 PTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVI 422
                  GL  T IEAM  G+ V+  N     +  V+NE+ GY  + +V   ++A++ V 
Sbjct: 104 TAKDEDFGL--TPIEAMASGKPVIAVNEGGF-KETVINEKTGYLVNADVNEIIDAMKKVS 160

Query: 423 RDGPKVLQRKGLACKEHA 440
           ++ P   ++    C   A
Sbjct: 161 KN-PDKFKK---DCFRRA 174

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score = 97.1 bits (242), Expect = 7e-22
 Identities = 61/442 (13%), Positives = 115/442 (26%), Gaps = 98/442 (22%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGA 155
           GG   +   +  ALA  G ++ + T     +   +      +      +   +     G 
Sbjct: 33  GGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQET--NKVRIVRIPFGG 90

Query: 156 FDYVHTESVSLPHWRAKMVPNVAVTW--HGIWYEVMH-----SKLFGELFSNQNGVLPGS 208
             ++  E   L  +  + V  +   +   G + +V+        L G L  N  G+ P +
Sbjct: 91  DKFLPKEE--LWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGL-PFT 147

Query: 209 MT---------ELQEAMPRLVDEIRFFSSYNQHIC------------ISNSAAEV----- 242
            T         E          E+     +++ I             I +++ E      
Sbjct: 148 FTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYS 207

Query: 243 ----LVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFP------EKLGVPANVSLVMGV 292
                  +         VI  GV+   F  +    ++          LG        +  
Sbjct: 208 HDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIA 267

Query: 293 AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQN------------- 339
           + RL + K H  L EA+           L++   G                         
Sbjct: 268 SSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIEL 327

Query: 340 ---------VKVLGALEAHQLSEFY----NALDVFVNPTL-RPQGLDLTLIEAMHCGRTV 385
                    V +       +L+  Y    +   VF   +   P G  L  +EAM  G   
Sbjct: 328 IDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFG--LAPVEAMASG--- 382

Query: 386 LTPNYPSIV-------RTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACK 437
             P     V         ++   + G    P + +     L        +         K
Sbjct: 383 -LP----AVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGK 436

Query: 438 EHALSMFT----ATKMASAYER 455
           +     +T    A       + 
Sbjct: 437 QRVEERYTWQETARGYLEVIQE 458

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 30/169 (17%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRY----AELGQNVKVL 343
             + + GR   +K   +L +A  ++++    + LL+ G GP  ++      +LG   +  
Sbjct: 3   FKIAMVGRYSNEKNQSVLIKAV-ALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF- 60

Query: 344 GALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEE 402
           G + +++L E      ++V+      +   +  +EA+  G   +  N P         +E
Sbjct: 61  GFVNSNELLEILKTCTLYVHAANVESEA--IACLEAISVGIVPVIANSPLSATRQFALDE 118

Query: 403 LGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA 450
               F P N K     ++  + +     +R      + AL+ +T     
Sbjct: 119 -RSLFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKSALN-YTLENSV 164

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score = 95.6 bits (237), Expect = 1e-21
 Identities = 51/402 (12%), Positives = 111/402 (27%), Gaps = 64/402 (15%)

Query: 94  APGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNND 153
            P G  R    +   ++ + HE+ VF   +  +  +     N+    A        LN  
Sbjct: 12  VPSGYGRVMRAIVPRIS-KAHEVIVFGIHAFGRSVHA----NIEEFDAQTAEHVRGLNEQ 66

Query: 154 GAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ 213
           G +         L  +     P++ + ++       +    G+        +   +  + 
Sbjct: 67  GFYYSG------LSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTK--IVLYVDLVS 118

Query: 214 EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAG 273
           + +   +  I         + +S      +       +  ++++ + VD           
Sbjct: 119 KNIRENLWWIFSHPKVVGVMAMSKCWISDICNYG--CKVPINIVSHFVD-----TKTIYD 171

Query: 274 VRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRY 333
            R    L    +  L + +  R    K   +   A +     +P   +          ++
Sbjct: 172 ARKLVGLSEYNDDVLFLNM-NRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKF 230

Query: 334 AELGQNVKVL-------------------GALEAHQLSEFYNALDVFVNPTLRPQGLDLT 374
                 ++ L                     L   ++   YNA DV VN +   +G  L 
Sbjct: 231 DLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCS-SGEGFGLC 289

Query: 375 LIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-------------------NVKSFV 415
             E    G+ ++             + +  Y   P                   +V   V
Sbjct: 290 SAEGAVLGKPLIISAVGGADD--YFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLV 347

Query: 416 EALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFF 457
           EA         K  +  G   ++   +  T   ++S    FF
Sbjct: 348 EAFTFF--KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFF 387

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score = 85.6 bits (211), Expect = 3e-18
 Identities = 38/394 (9%), Positives = 108/394 (27%), Gaps = 33/394 (8%)

Query: 73  FGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVH 132
              + +  +L +   +       GG+   A  L+     +  +  +    +   P  D+ 
Sbjct: 40  RTSSIKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATPNPK-DLQ 97

Query: 133 QGNLHVHFAANDHGSVNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSK 192
                 +    +     L       +    + ++P  +  +   +A  W   +       
Sbjct: 98  SFKSFKYVMPEEDKDFALQI---VPFNDRYNRTIPVAKHDIF--IATAWWTAYAAQRIVS 152

Query: 193 LFGELFSNQNGVLPGSMTELQEAMPRLVDE-IRFFSSYNQH-ICISNSAAEVLVKIYQ-- 248
              + +      +   + + +    +   + +   S+Y      I+   +E+L + +   
Sbjct: 153 WQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELLKQYFNNK 212

Query: 249 -LPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYE 307
                + +     ++ T   +  +                +++      V+     L+ E
Sbjct: 213 GYNFTDEYFFQPKINTTLKNYINDK----------RQKEKIILVYGRPSVKRNAFTLIVE 262

Query: 308 AFSSITR---DHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNP 364
           A     +         ++  G           G ++  LG L     ++      + ++ 
Sbjct: 263 ALKIFVQKYDRSNEWKIISVGEK-HKDIALGKGIHLNSLGKLTLEDYADLLKRSSIGISL 321

Query: 365 TLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIR 423
            + P       +E  H G  V+T  Y +  + +        +    N ++  E L  +  
Sbjct: 322 MISP-HPSYPPLEMAHFGLRVITNKYEN--KDLSNWHSNIVSLEQLNPENIAETLVELCM 378

Query: 424 DGPKVLQRKGLACKEHA--LSMFTATKMASAYER 455
                              ++ F         E 
Sbjct: 379 S-FNNRDVDKKESSNMMFYINEFNEFSFIKEIEE 411

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score = 80.0 bits (197), Expect = 4e-16
 Identities = 44/281 (15%), Positives = 80/281 (28%), Gaps = 60/281 (21%)

Query: 229 YNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFP-------EKLG 281
           Y  H   +      +V    +     +++  G D + +    E   R         E L 
Sbjct: 496 YESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLY 555

Query: 282 VPANVSLVMGV-----------AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG 330
                   + V             RL R K    L E +   TR      L+V G     
Sbjct: 556 SDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRK 615

Query: 331 RR--YAELGQNVKVLGALEAHQLSE--------------------FYNALDVFVNPTLR- 367
                 E  +  K+   +E ++L+                       +    FV P L  
Sbjct: 616 ESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYE 675

Query: 368 PQGLDLTLIEAMHCGRTVLTPNYPSIV---RTVVVNEELGYTFSPN-----VKSFVEALE 419
             G  LT++EAM CG     P + +       ++V+ + G+   P        +  +   
Sbjct: 676 AFG--LTVVEAMTCG----LPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFT 729

Query: 420 LVIRDGPKVLQRKGLACKEHALSMFT----ATKMASAYERF 456
               D P           +     +T    + ++ +    +
Sbjct: 730 KCKED-PSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 49/216 (22%)

Query: 257 ILNGVDETKF--VHDPEAGVR----FPEKLGVPANVSLVMGVAGRLVRD-KGHPLLYEAF 309
             NG+D + +   +   +          K G+     +     GR  R  KG  +L +A 
Sbjct: 2   SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMD--EGVTFMFIGRFDRGQKGVDVLLKAI 59

Query: 310 SSITRD--HPGVYLLVAGTG-PW-------------GRRYAELGQNVKVLGALEAHQLSE 353
             ++       +  ++ G G P                +      + +        +L  
Sbjct: 60  EILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSRE-----FVREL-- 112

Query: 354 FYNALDVFVNPTL-RPQGLDLTLIEAMHCGRTVLTPNYPSIVRTV-----VVNEELGYTF 407
            Y ++D  + P+   P G  L  +EAM  G  +  P    I   V     ++  E G   
Sbjct: 113 -YGSVDFVIIPSYFEPFG--LVALEAMCLG-AI--P----IASAVGGLRDIITNETGILV 162

Query: 408 SP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALS 442
              +      A+   +      L +    CK+ A+S
Sbjct: 163 KAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406

 Score = 54.3 bits (130), Expect = 4e-08
 Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 29/180 (16%)

Query: 252 RNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSS 311
            NV  + +GVD             + E +             G ++ D       E F  
Sbjct: 197 DNVFHVGHGVDHNLD--QLGDPSPYAEGIHA--------VAVGSMLFD------PEFFVV 240

Query: 312 ITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL 371
            ++  P V   V G+G    R+   G NV V G ++  Q   +       + P    Q  
Sbjct: 241 ASKAFPQVTFHVIGSGM--GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVP 298

Query: 372 D------LTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDG 425
                  + L++    G   + PN              G     N  S + A+   +   
Sbjct: 299 VYLADSSMKLLQYDFFGLPAVCPNAVVGPYKSRFGYTPG-----NADSVIAAITQALEAP 353

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 1e-05
 Identities = 49/391 (12%), Positives = 107/391 (27%), Gaps = 111/391 (28%)

Query: 128 HNDVHQGNLHVHFAANDHGSVNLNN---DGAFDYVHTESVSLPHWRAKMVPNVAVTWHGI 184
           H D   G     +   D  SV  +    +  FD    + +       + + ++ ++    
Sbjct: 6   HMDFETGEHQYQY--KDILSVFEDAFVDN--FDCKDVQDMPKSILSKEEIDHIIMSKD-- 59

Query: 185 WYEVMHS-KLFGELFSNQNGVLPGSMTE-LQEAMPRLVDEIRF-----------FSSYNQ 231
              V  + +LF  L S Q  ++   + E L+     L+  I+            +     
Sbjct: 60  --AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117

Query: 232 HICISNSAAEVLVKIYQLP-QRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVM 290
            +   N   +V  K Y +   +    +   + E +    P   V             L+ 
Sbjct: 118 RLYNDN---QVFAK-YNVSRLQPYLKLRQALLELR----PAKNV-------------LID 156

Query: 291 GVAG--------RLVRDKGHPLLYEAFSSITRDHP-GVYLLVAGTGPWGRRYAELGQNVK 341
           GV G         +               +       ++ L                 ++
Sbjct: 157 GVLGSGKTWVALDVCLSY----------KVQCKMDFKIFWLNLK------NCNSPETVLE 200

Query: 342 VLGALEAHQLSEFYNAL-DVFVNPTLR-----------------PQGL-------DLTLI 376
           +L  L  +Q+   + +  D   N  LR                    L       +    
Sbjct: 201 MLQKL-LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259

Query: 377 EAM--HCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFV--EALEL---VIRDGPKVL 429
            A    C + +LT  +  +   +        +   +  +    E   L    +   P+ L
Sbjct: 260 NAFNLSC-KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 430 QRKGLACKEH--ALSMFTATK--MASAYERF 456
            R+      +   LS+   +     + ++ +
Sbjct: 319 PRE--VLTTNPRRLSIIAESIRDGLATWDNW 347

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	465
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	100.0
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	100.0
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	100.0
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	100.0
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	100.0
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	100.0
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.97
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.97
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.97
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.95
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.95
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.95
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.94
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.92
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.92
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.91
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.91
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.89
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.86
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.85
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.83
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.83
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.78
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.77
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.77
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.75
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.72
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.65
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.64
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.6
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.54
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.42
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.37
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	99.34
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.32
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.28
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	99.02
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	99.01
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	99.0
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.56
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	98.56
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	98.51
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	98.49
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	98.39
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	97.81
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	97.8
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	97.77
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	97.65
3tov_A	349	Glycosyl transferase family 9; structural genomics	96.83
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	96.35
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	95.78
3ty2_A	261	5'-nucleotidase SURE; surviVal protein, phosphatas	93.79
1xv5_A	401	AGT, DNA alpha-glucosyltransferase; HET: DNA CME U	92.85
2phj_A	251	5'-nucleotidase SURE; SURE protein, putative acid	91.23
4g65_A	461	TRK system potassium uptake protein TRKA; structur	89.2
4gi5_A	280	Quinone reductase; protein structure initiative, F	86.36
2wqk_A	251	5'-nucleotidase SURE; SURE protein, putative acid	84.53
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	82.69
1kjn_A	157	MTH0777; hypotethical protein, structural genomics	81.7
1j9j_A	247	Stationary phase surviVal protein; SURE protein, u	80.59
2q62_A	247	ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobi	80.39

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=1.1e-46  Score=372.56  Aligned_cols=367  Identities=18%  Similarity=0.231  Sum_probs=283.2

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-----------------ccCCcceEEE
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-----------------VHQGNLHVHF  140 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-----------------~~~~~~~v~~  140 (465)
                      ++|||++++..+++ +..||.++++.+++++|+++||+|+|+++.........                 ....+..+..
T Consensus         1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~   79 (439)
T 3fro_A            1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR   79 (439)
T ss_dssp             CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred             CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEE
Confidence            47999999988875 57899999999999999999999999997765443211                 0223333443


Q ss_pred             eecC----CCccc------------cC------------CCCCCcEEEecCCchh---HHh--hhcCCcEEEEecchhHH
Q 044542          141 AAND----HGSVN------------LN------------NDGAFDYVHTESVSLP---HWR--AKMVPNVAVTWHGIWYE  187 (465)
Q Consensus       141 ~~~~----~~~~~------------~~------------~~~~~DiI~~~~~~~~---~~~--~~~~p~~v~~~h~~~~~  187 (465)
                      ....    ...+.            +.            +..+||+||+|++...   ..+  ..++| +++++|+....
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~  158 (439)
T 3fro_A           80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKS  158 (439)
T ss_dssp             EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCC-EEEEESCCCCC
T ss_pred             ecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCC-EEEEecccccc
Confidence            3320    01111            00            2679999999976322   122  24667 99999997532


Q ss_pred             HHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCcc
Q 044542          188 VMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV  267 (465)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~  267 (465)
                      ...........     .    . ... .......++..++.+|.++++|+..++.....++.+..++.+||||+|.+.|.
T Consensus       159 ~~~~~~~~~~~-----~----~-~~~-~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~  227 (439)
T 3fro_A          159 KLPAFYFHEAG-----L----S-ELA-PYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWN  227 (439)
T ss_dssp             CEEHHHHHHTT-----C----G-GGC-CSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSC
T ss_pred             cCchHHhCccc-----c----c-ccc-ccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcC
Confidence            11111110000     0    0 000 00000112366789999999999999887776777889999999999999887


Q ss_pred             CCc------ccCcccccccCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHhhhcC--CCeEEEEEeCCcch--hHHHHh
Q 044542          268 HDP------EAGVRFPEKLGVPANVSLVMGVAGRLV-RDKGHPLLYEAFSSITRDH--PGVYLLVAGTGPWG--RRYAEL  336 (465)
Q Consensus       268 ~~~------~~~~~~r~~~g~~~~~~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~~--~~~~l~ivG~g~~~--~~~~~l  336 (465)
                      +..      ..+..+++++|++++  .+++++|++. +.||++.+++|++.+.+++  ++++|+|+|+|+..  +.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~  305 (439)
T 3fro_A          228 ESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSL  305 (439)
T ss_dssp             GGGSCSCHHHHHHHHHHHHTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHH
T ss_pred             cccccchhhhhHHHHHHHcCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHH
Confidence            652      234567888998765  7788999999 9999999999999999877  89999999998865  555544


Q ss_pred             ----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CH
Q 044542          337 ----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NV  411 (465)
Q Consensus       337 ----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~  411 (465)
                          ++.+.+.|+++.+++.++|++||++|+||.+ ||+|++++|||+||+|||+++.|+.. +++.++ +|+++++ |+
T Consensus       306 ~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~-e~~~~~~~EAma~G~Pvi~s~~~~~~-e~~~~~-~g~~~~~~d~  382 (439)
T 3fro_A          306 EEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DIITNE-TGILVKAGDP  382 (439)
T ss_dssp             HHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSC-CSSCHHHHHHHHTTCEEEEESSTHHH-HHCCTT-TCEEECTTCH
T ss_pred             HhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCC-CCccHHHHHHHHCCCCeEEcCCCCcc-eeEEcC-ceEEeCCCCH
Confidence                3677889999999999999999999999986 99999999999999999999999998 787776 9999999 99


Q ss_pred             HHHHHHHHHHHh-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCCC
Q 044542          412 KSFVEALELVIR-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPY  464 (465)
Q Consensus       412 ~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~  464 (465)
                      ++++++|.++++ + ++.++++++++++++ ++|||+.++++|.++|+++++++
T Consensus       383 ~~la~~i~~ll~~~-~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~  434 (439)
T 3fro_A          383 GELANAILKALELS-RSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA  434 (439)
T ss_dssp             HHHHHHHHHHHHHT-TTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred             HHHHHHHHHHHhcC-HHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence            999999999999 7 889999999999999 55999999999999999998764

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=1.2e-46  Score=367.05  Aligned_cols=353  Identities=20%  Similarity=0.244  Sum_probs=283.4

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-ccCCcceEEEeecCCCc---------
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-VHQGNLHVHFAANDHGS---------  147 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~---------  147 (465)
                      ++|||+++++.+|  +..||+++++..++++|  .||+|+|++.......... .......+.........         
T Consensus         3 ~~mkIl~v~~~~~--p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   78 (394)
T 3okp_A            3 ASRKTLVVTNDFP--PRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAM   78 (394)
T ss_dssp             -CCCEEEEESCCT--TSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHH
T ss_pred             CCceEEEEeCccC--CccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHH
Confidence            4789999999887  46899999999999999  6999999998765431111 11222333332221110         


Q ss_pred             cccCCCCCCcEEEecCCchhHH-----hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542          148 VNLNNDGAFDYVHTESVSLPHW-----RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE  222 (465)
Q Consensus       148 ~~~~~~~~~DiI~~~~~~~~~~-----~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (465)
                      ....++.+||+||++......+     ...++|+++.++|+........                   .....+     .
T Consensus        79 ~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-------------------~~~~~~-----~  134 (394)
T 3okp_A           79 AEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSML-------------------PGSRQS-----L  134 (394)
T ss_dssp             HHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTTS-------------------HHHHHH-----H
T ss_pred             HHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhhc-------------------chhhHH-----H
Confidence            0111667899999987532211     1235566888999864321000                   111111     1


Q ss_pred             HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccC-CcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH-DPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~-~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      +.+++.+|.++++|+..++.+.+.++ +..++.++|||+|.+.+.+ ....+..+++++|++++. ++++++|++.+.||
T Consensus       135 ~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~Kg  212 (394)
T 3okp_A          135 RKIGTEVDVLTYISQYTLRRFKSAFG-SHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTT-PVIACNSRLVPRKG  212 (394)
T ss_dssp             HHHHHHCSEEEESCHHHHHHHHHHHC-SSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTC-CEEEEESCSCGGGC
T ss_pred             HHHHHhCCEEEEcCHHHHHHHHHhcC-CCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCc-eEEEEEeccccccC
Confidence            25678999999999999999999876 4589999999999998877 555557788999998776 67789999999999


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc----CCeEEcCCCChhHHHHHHHhcCeEEecccCC------CCC
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG----QNVKVLGALEAHQLSEFYNALDVFVNPTLRP------QGL  371 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~----~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~------eg~  371 (465)
                      ++.+++|++.+.+++++++|+|+|+|+..+.++++.    ++|.|+|+++++++.++|+.||++|+||.+.      ||+
T Consensus       213 ~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~  292 (394)
T 3okp_A          213 QDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGL  292 (394)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSS
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCcccccccccccc
Confidence            999999999999988999999999999888777754    8999999999999999999999999999642      999


Q ss_pred             cHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542          372 DLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA  450 (465)
Q Consensus       372 ~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  450 (465)
                      |++++|||++|+|||+++.++.. +++.++ +|+++++ |+++++++|.+++++ ++.+++++++++++++++|+|+.++
T Consensus       293 ~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~  369 (394)
T 3okp_A          293 GIVYLEAQACGVPVIAGTSGGAP-ETVTPA-TGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAEWSWEIMG  369 (394)
T ss_dssp             CHHHHHHHHTTCCEEECSSTTGG-GGCCTT-TEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHTBHHHHH
T ss_pred             CcHHHHHHHcCCCEEEeCCCChH-HHHhcC-CceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            99999999999999999999998 888888 9999999 999999999999998 9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCC
Q 044542          451 SAYERFFLRMKNP  463 (465)
Q Consensus       451 ~~~~~~~~~~~~~  463 (465)
                      +++.++|+++..+
T Consensus       370 ~~~~~~~~~~~r~  382 (394)
T 3okp_A          370 ERLTNILQSEPRK  382 (394)
T ss_dssp             HHHHHHHHSCCC-
T ss_pred             HHHHHHHHHhccC
Confidence            9999999987643

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=8.3e-46  Score=366.37  Aligned_cols=367  Identities=19%  Similarity=0.247  Sum_probs=275.6

Q ss_pred             CCCceeEEEEeCCCCCC-----CCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cccCCcceEEEeecCCC---
Q 044542           76 TFEKLKLAVFSKTWPIG-----AAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DVHQGNLHVHFAANDHG---  146 (465)
Q Consensus        76 ~~~~mkIl~v~~~~p~~-----~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~---  146 (465)
                      ...+|||++++..+++.     ...||.++++..++++|.+.||+|++++......... .....+..+........   
T Consensus        17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~   96 (438)
T 3c48_A           17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL   96 (438)
T ss_dssp             --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC
T ss_pred             CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc
Confidence            45678999999877531     1469999999999999999999999999875422111 11112233333322110   


Q ss_pred             ----cccc------------C-CCCCCcEEEecCCch--hHH-h--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCC
Q 044542          147 ----SVNL------------N-NDGAFDYVHTESVSL--PHW-R--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGV  204 (465)
Q Consensus       147 ----~~~~------------~-~~~~~DiI~~~~~~~--~~~-~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~  204 (465)
                          .+..            . ...+||+||+|.+..  ..+ +  ..++| +++++|+........     ..     .
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~-----~~-----~  165 (438)
T 3c48_A           97 SKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIP-LIHTAHTLAAVKNSY-----RD-----D  165 (438)
T ss_dssp             CGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCC-EEEECSSCHHHHSCC-------------
T ss_pred             chhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCC-EEEEecCCccccccc-----cc-----c
Confidence                0100            0 122499999997421  111 1  23677 999999975431100     00     0


Q ss_pred             CCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc-cCcccccccCCC
Q 044542          205 LPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE-AGVRFPEKLGVP  283 (465)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~-~~~~~r~~~g~~  283 (465)
                      ..    ... ...+...++..++.+|.++++|+..++.+.+.+|++..++.+||||+|.+.|.+... ....++++++++
T Consensus       166 ~~----~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~  240 (438)
T 3c48_A          166 SD----TPE-SEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIP  240 (438)
T ss_dssp             -C----CHH-HHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCC
T ss_pred             cC----Ccc-hHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCCC
Confidence            00    000 111112234678899999999999999999988998899999999999988866432 222378888887


Q ss_pred             CCCcEEEEEeeccccccCHHHHHHHHHHhhhcCC--CeEEEEEeC----CcchhHHHH----hc--CCeEEcCCCChhHH
Q 044542          284 ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP--GVYLLVAGT----GPWGRRYAE----LG--QNVKVLGALEAHQL  351 (465)
Q Consensus       284 ~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~--~~~l~ivG~----g~~~~~~~~----l~--~~V~~~g~v~~~~~  351 (465)
                      ++. .+++++|++.+.||++.+++|++.+.+++|  +++|+|+|+    |+..+.+++    ++  ++|.|+|+++++++
T Consensus       241 ~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~  319 (438)
T 3c48_A          241 LHT-KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSEL  319 (438)
T ss_dssp             SSS-EEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHH
T ss_pred             CCC-cEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHH
Confidence            766 778899999999999999999999998876  899999998    665555544    33  78999999999999


Q ss_pred             HHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHH
Q 044542          352 SEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQ  430 (465)
Q Consensus       352 ~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~  430 (465)
                      .++|+.||++|+||.. |++|++++|||+||+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.++
T Consensus       320 ~~~~~~adv~v~ps~~-e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~  396 (438)
T 3c48_A          320 VAVYRAADIVAVPSFN-ESFGLVAMEAQASGTPVIAARVGGLP-IAVAEGETGLLVDGHSPHAWADALATLLDD-DETRI  396 (438)
T ss_dssp             HHHHHHCSEEEECCSC-CSSCHHHHHHHHTTCCEEEESCTTHH-HHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHH
T ss_pred             HHHHHhCCEEEECccc-cCCchHHHHHHHcCCCEEecCCCChh-HHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHH
Confidence            9999999999999975 99999999999999999999999998 88999999999998 999999999999998 89999


Q ss_pred             HHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542          431 RKGLACKEHALSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       431 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                      ++++++++++++ |+|+.+++++.++|++++++
T Consensus       397 ~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~  428 (438)
T 3c48_A          397 RMGEDAVEHART-FSWAATAAQLSSLYNDAIAN  428 (438)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhh
Confidence            999999999999 99999999999999998754

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=1.7e-45  Score=370.11  Aligned_cols=373  Identities=15%  Similarity=0.109  Sum_probs=279.1

Q ss_pred             ceeEEEEeCCCCCC---------CCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC-CC---ccc----CCcceEEEe
Q 044542           79 KLKLAVFSKTWPIG---------AAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP-HN---DVH----QGNLHVHFA  141 (465)
Q Consensus        79 ~mkIl~v~~~~p~~---------~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~---~~~----~~~~~v~~~  141 (465)
                      +|||++++..+++.         +..||+++++.+++++|.+.||+|+|++....... ..   ...    ..+..+...
T Consensus         7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~   86 (499)
T 2r60_A            7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI   86 (499)
T ss_dssp             CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred             cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence            58999999876542         35799999999999999999999999997654321 00   011    223334333


Q ss_pred             ecCCC-------cccc-----------CCC--CCCcEEEecCCch--hHH-h--hhcCCcEEEEecchhHHHHhhhhhhh
Q 044542          142 ANDHG-------SVNL-----------NND--GAFDYVHTESVSL--PHW-R--AKMVPNVAVTWHGIWYEVMHSKLFGE  196 (465)
Q Consensus       142 ~~~~~-------~~~~-----------~~~--~~~DiI~~~~~~~--~~~-~--~~~~p~~v~~~h~~~~~~~~~~~~~~  196 (465)
                      +....       .+..           .++  .+||+||+|....  ... +  ..++| ++++.|+..........   
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p-~v~~~H~~~~~~~~~~~---  162 (499)
T 2r60_A           87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLP-FTFTGHSLGAQKMEKLN---  162 (499)
T ss_dssp             CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCC-EEEECSSCHHHHHHTTC---
T ss_pred             cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCc-EEEEccCcccccchhhc---
Confidence            32111       1111           122  5899999997521  111 1  23678 99999997654321100   


Q ss_pred             hhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH--hC-C----CCCCEEEecCCCCCCCccCC
Q 044542          197 LFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI--YQ-L----PQRNVHVILNGVDETKFVHD  269 (465)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~-~----~~~ki~vi~ngvd~~~~~~~  269 (465)
                        . .....+.+. ...........++..++.+|.++++|+..++.+.+.  +| +    +..++.+||||+|.+.|.+.
T Consensus       163 --~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~  238 (499)
T 2r60_A          163 --V-NTSNFKEMD-ERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGE  238 (499)
T ss_dssp             --C-CSTTSHHHH-HHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSC
T ss_pred             --c-CCCCcchhh-hhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCcc
Confidence              0 000000000 111111222234467899999999999999999887  77 6    78899999999999888764


Q ss_pred             cc--cCcccccccC-----CCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCC-eEEEEEeC--Cc------c----
Q 044542          270 PE--AGVRFPEKLG-----VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG-VYLLVAGT--GP------W----  329 (465)
Q Consensus       270 ~~--~~~~~r~~~g-----~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~-~~l~ivG~--g~------~----  329 (465)
                      ..  .+..+|+++|     ++.+. .+++++||+.+.||++.+++|++.+.+++++ ++++|+|+  |+      .    
T Consensus       239 ~~~~~~~~~r~~~~~~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~  317 (499)
T 2r60_A          239 YGDKIKAKITKYLERDLGSERMEL-PAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE  317 (499)
T ss_dssp             CCHHHHHHHHHHHHHHSCGGGTTS-CEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHH
T ss_pred             chhhhHHHHHHHhcccccccCCCC-cEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccc
Confidence            32  1245677777     66565 6678999999999999999999999876444 58999998  33      1    


Q ss_pred             ---hhHHHH----hc--CCeEEcCCCChhHHHHHHHhc----CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCccee
Q 044542          330 ---GRRYAE----LG--QNVKVLGALEAHQLSEFYNAL----DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRT  396 (465)
Q Consensus       330 ---~~~~~~----l~--~~V~~~g~v~~~~~~~~~~~a----Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e  396 (465)
                         .+.+++    ++  ++|+|+|+++++++.++|+.|    |++|+||.+ ||||++++|||+||+|||+++.||.. |
T Consensus       318 ~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~-Eg~~~~~lEAma~G~PvI~s~~~g~~-e  395 (499)
T 2r60_A          318 KEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFY-EPFGLAPVEAMASGLPAVVTRNGGPA-E  395 (499)
T ss_dssp             HHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSC-BCCCSHHHHHHHTTCCEEEESSBHHH-H
T ss_pred             hHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECccc-CCCCcHHHHHHHcCCCEEEecCCCHH-H
Confidence               333433    33  789999999999999999999    999999986 99999999999999999999999998 8


Q ss_pred             eeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542          397 VVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       397 ~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                      ++.++.+|+++++ |+++++++|.+++++ ++.+++++++++++++++|||+.+++++.++|++++++
T Consensus       396 ~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~  462 (499)
T 2r60_A          396 ILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR  462 (499)
T ss_dssp             HTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred             HhcCCceEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence            9889999999998 999999999999998 89999999999999999999999999999999998754

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=1.6e-44  Score=361.93  Aligned_cols=371  Identities=19%  Similarity=0.189  Sum_probs=268.9

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC------------------Ccc---cCCcceE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH------------------NDV---HQGNLHV  138 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~------------------~~~---~~~~~~v  138 (465)
                      |||++++..+++....||+++++.+++++|+++||+|+|+++.......                  ...   ...+..+
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v   80 (485)
T 1rzu_A            1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence            8999999977643357999999999999999999999999976432100                  000   0123333


Q ss_pred             EEeec-----CCC-cc--------------------------ccC-CCCCCcEEEecCCc---hhHHhh----hcCCcEE
Q 044542          139 HFAAN-----DHG-SV--------------------------NLN-NDGAFDYVHTESVS---LPHWRA----KMVPNVA  178 (465)
Q Consensus       139 ~~~~~-----~~~-~~--------------------------~~~-~~~~~DiI~~~~~~---~~~~~~----~~~p~~v  178 (465)
                      .....     ..+ .+                          ... ++.+|||||+|++.   +...++    .++| ++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~p-~v  159 (485)
T 1rzu_A           81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL  159 (485)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred             EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccCCCC-EE
Confidence            33221     100 00                          000 36789999999742   222222    4567 99


Q ss_pred             EEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH-hC--------C
Q 044542          179 VTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI-YQ--------L  249 (465)
Q Consensus       179 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~--------~  249 (465)
                      +++|+......   ...............+.............++..++.+|.++++|+..++.+.+. +|        +
T Consensus       160 ~t~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~  236 (485)
T 1rzu_A          160 LTIHNIAFQGQ---FGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGS  236 (485)
T ss_dssp             EEESCTTCCCE---ECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHT
T ss_pred             EEecCccccCC---CCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHh
Confidence            99999642100   000000000000000000000000000112356788999999999999998764 44        4


Q ss_pred             CCCCEEEecCCCCCCCccCCccc-----------------CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHh
Q 044542          250 PQRNVHVILNGVDETKFVHDPEA-----------------GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSI  312 (465)
Q Consensus       250 ~~~ki~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l  312 (465)
                      +..++.+||||+|.+.|.+....                 +..+++++|+++++..+++++||+.+.||++.+++|++.+
T Consensus       237 ~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l  316 (485)
T 1rzu_A          237 RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEI  316 (485)
T ss_dssp             TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHH
T ss_pred             hcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHH
Confidence            67899999999999888765431                 3567888899876335888999999999999999999999


Q ss_pred             hhcCCCeEEEEEeCCc--chhHHHHh----cCCeE-EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeE
Q 044542          313 TRDHPGVYLLVAGTGP--WGRRYAEL----GQNVK-VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTV  385 (465)
Q Consensus       313 ~~~~~~~~l~ivG~g~--~~~~~~~l----~~~V~-~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~Pv  385 (465)
                      .+  ++++|+|+|+|+  ..+.++++    +++|. +.|+ +.+++..+|+.||++|+||.+ ||||++++|||+||+||
T Consensus       317 ~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~-E~~~~~~lEAma~G~Pv  392 (485)
T 1rzu_A          317 VS--LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGCDAIIIPSRF-EPCGLTQLYALRYGCIP  392 (485)
T ss_dssp             HH--TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTCEE
T ss_pred             Hh--cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcCCEEEECccc-CCCCHHHHHHHHCCCCE
Confidence            76  489999999986  34555443    37897 7888 778889999999999999986 99999999999999999


Q ss_pred             EecCCCCcceeeeeeC---------CceEEeCC-CHHHHHHHHHHHH---hCChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          386 LTPNYPSIVRTVVVNE---------ELGYTFSP-NVKSFVEALELVI---RDGPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       386 I~s~~gg~~~e~v~~~---------~~G~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      |+++.||.+ |++.++         .+|+++++ |+++|+++|.+++   ++ ++.++++++++++   ++|||+.++++
T Consensus       393 I~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~~~~  467 (485)
T 1rzu_A          393 VVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLGMK---SDVSWEKSAGL  467 (485)
T ss_dssp             EEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHT---CCCBHHHHHHH
T ss_pred             EEeCCCChh-heecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH---HhCChHHHHHH
Confidence            999999998 888888         89999999 9999999999999   67 8899999998874   67999999999


Q ss_pred             HHHHHHHhcCC
Q 044542          453 YERFFLRMKNP  463 (465)
Q Consensus       453 ~~~~~~~~~~~  463 (465)
                      |.++|++++++
T Consensus       468 ~~~~y~~~~~~  478 (485)
T 1rzu_A          468 YAALYSQLISK  478 (485)
T ss_dssp             HHHHHHHHTC-
T ss_pred             HHHHHHHhhCC
Confidence            99999998764

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=8.3e-43  Score=340.03  Aligned_cols=345  Identities=19%  Similarity=0.283  Sum_probs=262.0

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC------Ccc-----
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------GSV-----  148 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~-----  148 (465)
                      |+.-+....||   ..||+++++..++++|+++||+|++++.........  ......+.......      ..+     
T Consensus        14 ~~~~~~~~~~p---~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~   88 (394)
T 2jjm_A           14 MKLKIGITCYP---SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK--VYPNIYFHEVTVNQYSVFQYPPYDLALA   88 (394)
T ss_dssp             -CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C--CCTTEEEECCCCC----CCSCCHHHHHH
T ss_pred             heeeeehhcCC---CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc--cCCceEEEecccccccccccccccHHHH
Confidence            45555555665   579999999999999999999999999864322111  11111121111100      000     


Q ss_pred             ----ccCCCCCCcEEEecCCch---hHHhhh-----cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhh
Q 044542          149 ----NLNNDGAFDYVHTESVSL---PHWRAK-----MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAM  216 (465)
Q Consensus       149 ----~~~~~~~~DiI~~~~~~~---~~~~~~-----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (465)
                          ...++.+||+||+|....   ..++.+     ++| +++++|+......         .. .        .....+
T Consensus        89 ~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~---------~~-~--------~~~~~~  149 (394)
T 2jjm_A           89 SKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIK-IVTTLHGTDITVL---------GS-D--------PSLNNL  149 (394)
T ss_dssp             HHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSE-EEEECCHHHHHTT---------TT-C--------TTTHHH
T ss_pred             HHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCC-EEEEEecCccccc---------CC-C--------HHHHHH
Confidence                011567899999996531   222221     366 9999998643100         00 0        111111


Q ss_pred             HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc
Q 044542          217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL  296 (465)
Q Consensus       217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl  296 (465)
                           ++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+..  ...++++++++++. .+++++|++
T Consensus       150 -----~~~~~~~ad~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~--~~~~~~~~~~~~~~-~~i~~~G~~  220 (394)
T 2jjm_A          150 -----IRFGIEQSDVVTAVSHSLINETHELVKP-NKDIQTVYNFIDERVYFKRD--MTQLKKEYGISESE-KILIHISNF  220 (394)
T ss_dssp             -----HHHHHHHSSEEEESCHHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCCC--CHHHHHHTTCC----CEEEEECCC
T ss_pred             -----HHHHHhhCCEEEECCHHHHHHHHHhhCC-cccEEEecCCccHHhcCCcc--hHHHHHHcCCCCCC-eEEEEeecc
Confidence                 1255788999999999999999997664 68999999999998876643  34567788886665 677799999


Q ss_pred             ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCC
Q 044542          297 VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG  370 (465)
Q Consensus       297 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg  370 (465)
                      .+.||++.+++|++.+.++ ++++|+|+|+|+..+.++++    +  ++|.|+|+.  +++.++|+.||++|+||.. ||
T Consensus       221 ~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~-e~  296 (394)
T 2jjm_A          221 RKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSEK-ES  296 (394)
T ss_dssp             CGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSC--SCTHHHHHTCSEEEECCSC-CS
T ss_pred             ccccCHHHHHHHHHHHHhh-CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCch--hhHHHHHHhCCEEEecccc-CC
Confidence            9999999999999999877 57999999999877666543    2  789999974  8999999999999999975 99


Q ss_pred             CcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHH
Q 044542          371 LDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKM  449 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  449 (465)
                      +|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+++++++++++++++|+|+.+
T Consensus       297 ~~~~~~EAma~G~PvI~~~~~~~~-e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~  374 (394)
T 2jjm_A          297 FGLVLLEAMACGVPCIGTRVGGIP-EVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARESVYEQFRSEKI  374 (394)
T ss_dssp             CCHHHHHHHHTTCCEEEECCTTST-TTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             CchHHHHHHhcCCCEEEecCCChH-HHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHH
Confidence            999999999999999999999998 89999999999999 999999999999998 899999999999999888999999


Q ss_pred             HHHHHHHHHHhcCC
Q 044542          450 ASAYERFFLRMKNP  463 (465)
Q Consensus       450 ~~~~~~~~~~~~~~  463 (465)
                      ++++.++|++++++
T Consensus       375 ~~~~~~~~~~~~~~  388 (394)
T 2jjm_A          375 VSQYETIYYDVLRD  388 (394)
T ss_dssp             HHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998765

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=4.3e-43  Score=343.30  Aligned_cols=347  Identities=19%  Similarity=0.280  Sum_probs=265.2

Q ss_pred             CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcc-cCCcceEEEeecC-CCccc----
Q 044542           76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDV-HQGNLHVHFAAND-HGSVN----  149 (465)
Q Consensus        76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-~~~~~~v~~~~~~-~~~~~----  149 (465)
                      ..++|||+++++.+|  +..||.++++..++++|.+.||+|++++........... ...+..+...... ...+.    
T Consensus        17 ~~~~MkIl~i~~~~~--~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (406)
T 2gek_A           17 RGSHMRIGMVCPYSF--DVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPA   94 (406)
T ss_dssp             ----CEEEEECSSCT--TSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHH
T ss_pred             CCCcceEEEEeccCC--CCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHH
Confidence            345799999998765  366999999999999999999999999988654411111 1111111111000 00011    


Q ss_pred             -------cCCCCCCcEEEecCCch---hHHhh--hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhH
Q 044542          150 -------LNNDGAFDYVHTESVSL---PHWRA--KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMP  217 (465)
Q Consensus       150 -------~~~~~~~DiI~~~~~~~---~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (465)
                             ..++.+||+||++....   .....  .+.| +++++|+.....                      .....+.
T Consensus        95 ~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~----------------------~~~~~~~  151 (406)
T 2gek_A           95 THRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGP-IVATFHTSTTKS----------------------LTLSVFQ  151 (406)
T ss_dssp             HHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESS-EEEEECCCCCSH----------------------HHHHHHH
T ss_pred             HHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCC-EEEEEcCcchhh----------------------hhHHHHH
Confidence                   11456899999987532   11222  2567 999999853210                      1111112


Q ss_pred             HHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc-
Q 044542          218 RLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL-  296 (465)
Q Consensus       218 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl-  296 (465)
                      +.+.  ..++.+|.++++|+..++.+.+.++  ..++ ++|||+|.+.+.+....       .+++.+. .+++++|++ 
T Consensus       152 ~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~-------~~~~~~~-~~i~~~G~~~  218 (406)
T 2gek_A          152 GILR--PYHEKIIGRIAVSDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLL-------DGYPREG-RTVLFLGRYD  218 (406)
T ss_dssp             STTH--HHHTTCSEEEESSHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCC-------TTCSCSS-CEEEEESCTT
T ss_pred             HHHH--HHHhhCCEEEECCHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchh-------hhccCCC-eEEEEEeeeC
Confidence            2222  5578999999999999999988766  4678 99999998777654321       1122233 678899999 


Q ss_pred             ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542          297 VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD  372 (465)
Q Consensus       297 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~  372 (465)
                      .+.||++.+++|+..+.+++|+++|+|+|+|+. +.++++    .++|.++|+++++++.++|+.||++|+||.+.||+|
T Consensus       219 ~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~  297 (406)
T 2gek_A          219 EPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFG  297 (406)
T ss_dssp             SGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSC
T ss_pred             ccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCc
Confidence            999999999999999998889999999999887 666554    378999999999999999999999999996459999


Q ss_pred             HHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      ++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.+++++++++++++ .|+|+.+++
T Consensus       298 ~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~-~~s~~~~~~  374 (406)
T 2gek_A          298 IVLVEAMAAGTAVVASDLDAFR-RVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVH-RYDWSVVSA  374 (406)
T ss_dssp             HHHHHHHHHTCEEEECCCHHHH-HHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGG-GGBHHHHHH
T ss_pred             hHHHHHHHcCCCEEEecCCcHH-HHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH-hCCHHHHHH
Confidence            9999999999999999999998 88888999999998 999999999999998 8999999999999998 799999999


Q ss_pred             HHHHHHHHhcCCC
Q 044542          452 AYERFFLRMKNPY  464 (465)
Q Consensus       452 ~~~~~~~~~~~~~  464 (465)
                      ++.++|++++++.
T Consensus       375 ~~~~~~~~~~~~~  387 (406)
T 2gek_A          375 QIMRVYETVSGAG  387 (406)
T ss_dssp             HHHHHHHHHCCTT
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999988653

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=1.6e-43  Score=354.58  Aligned_cols=371  Identities=16%  Similarity=0.188  Sum_probs=265.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-----------------Ccc---cCCcceEE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH-----------------NDV---HQGNLHVH  139 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------------~~~---~~~~~~v~  139 (465)
                      |||+++++.+++....||+++++.+|+++|+++||+|+|+++.......                 ...   ...+..+.
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~   80 (485)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred             CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence            8999999977543357999999999999999999999999976422100                 000   01233333


Q ss_pred             Eeec-----CCC-cc-----------------------ccCC----CCCCcEEEecCCc---hhHHhh---hcCCcEEEE
Q 044542          140 FAAN-----DHG-SV-----------------------NLNN----DGAFDYVHTESVS---LPHWRA---KMVPNVAVT  180 (465)
Q Consensus       140 ~~~~-----~~~-~~-----------------------~~~~----~~~~DiI~~~~~~---~~~~~~---~~~p~~v~~  180 (465)
                      ....     ..+ .+                       ...+    +.+||+||+|++.   +...++   .++| ++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~p-~v~t  159 (485)
T 2qzs_A           81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAK-SVFT  159 (485)
T ss_dssp             EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSSE-EEEE
T ss_pred             EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCCC-EEEE
Confidence            3221     000 00                       0112    3799999999753   222222   3567 9999


Q ss_pred             ecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH-hCCC--------C
Q 044542          181 WHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI-YQLP--------Q  251 (465)
Q Consensus       181 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~~~--------~  251 (465)
                      +|+......   ...............+.............++..++.+|.++++|+..++.+.+. +|..        .
T Consensus       160 ~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~  236 (485)
T 2qzs_A          160 VHNLAYQGM---FYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRH  236 (485)
T ss_dssp             ESCTTCCCE---EEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHH
T ss_pred             ecCccccCC---CCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhc
Confidence            999642100   000000000000000000000000000112255788999999999999988764 4532        2


Q ss_pred             --CCEEEecCCCCCCCccCCcc-----------------cCcccccccCCCCC-CcEEEEEeeccccccCHHHHHHHHHH
Q 044542          252 --RNVHVILNGVDETKFVHDPE-----------------AGVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLLYEAFSS  311 (465)
Q Consensus       252 --~ki~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~ll~a~~~  311 (465)
                        .++.+||||+|.+.|.+...                 .+..+++++|++.+ +..+++++||+.+.||++.+++|++.
T Consensus       237 ~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~  316 (485)
T 2qzs_A          237 REGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPG  316 (485)
T ss_dssp             HTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHH
T ss_pred             cCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHH
Confidence              78999999999998876542                 13467788888761 33778899999999999999999999


Q ss_pred             hhhcCCCeEEEEEeCCc--chhHHHHh----cCCeE-EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe
Q 044542          312 ITRDHPGVYLLVAGTGP--WGRRYAEL----GQNVK-VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT  384 (465)
Q Consensus       312 l~~~~~~~~l~ivG~g~--~~~~~~~l----~~~V~-~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P  384 (465)
                      +.+  ++++|+|+|+|+  ..+.++++    +++|. +.|+ +.+++..+|+.||++|+||.+ ||||++++|||+||+|
T Consensus       317 l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~-E~~g~~~lEAma~G~P  392 (485)
T 2qzs_A          317 LLE--QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGGADVILVPSRF-EPCGLTQLYGLKYGTL  392 (485)
T ss_dssp             HHH--TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTCE
T ss_pred             Hhh--CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHhCCEEEECCcc-CCCcHHHHHHHHCCCC
Confidence            976  489999999985  34455443    36886 8888 778889999999999999986 9999999999999999


Q ss_pred             EEecCCCCcceeeeeeC---------CceEEeCC-CHHHHHHHHHHHH---hCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          385 VLTPNYPSIVRTVVVNE---------ELGYTFSP-NVKSFVEALELVI---RDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       385 vI~s~~gg~~~e~v~~~---------~~G~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      ||+++.||.+ |++.++         .+|+++++ |+++++++|.+++   .+ ++.++++++++++   ++|||+.+++
T Consensus       393 vI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~~~  467 (485)
T 2qzs_A          393 PLVRRTGGLA-DTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR-PSLWRFVQRQAMA---MDFSWQVAAK  467 (485)
T ss_dssp             EEEESSHHHH-HHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS-HHHHHHHHHHHHH---CCCCHHHHHH
T ss_pred             EEECCCCCcc-ceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHh---hcCCHHHHHH
Confidence            9999999998 888888         89999999 9999999999999   57 8899999998874   6799999999


Q ss_pred             HHHHHHHHhcCC
Q 044542          452 AYERFFLRMKNP  463 (465)
Q Consensus       452 ~~~~~~~~~~~~  463 (465)
                      +|.++|+++..+
T Consensus       468 ~~~~ly~~~~~~  479 (485)
T 2qzs_A          468 SYRELYYRLKLE  479 (485)
T ss_dssp             HHHHHHHHHC--
T ss_pred             HHHHHHHHhhhh
Confidence            999999998754

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=5.6e-43  Score=350.75  Aligned_cols=373  Identities=17%  Similarity=0.206  Sum_probs=257.1

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-c------c--------------cCCc
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-D------V--------------HQGN  135 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~------~--------------~~~~  135 (465)
                      ...||||+++.++++-...||.+.++..|.++|+++||+|.|+++........ +      +              ...+
T Consensus         7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   86 (536)
T 3vue_A            7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRG   86 (536)
T ss_dssp             -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETT
T ss_pred             CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECC
Confidence            45799999999876545789999999999999999999999999765432211 0      0              0111


Q ss_pred             ceEEEeecCC---C--------ccc------cC------------------------------CCCCCcEEEecCCc---
Q 044542          136 LHVHFAANDH---G--------SVN------LN------------------------------NDGAFDYVHTESVS---  165 (465)
Q Consensus       136 ~~v~~~~~~~---~--------~~~------~~------------------------------~~~~~DiI~~~~~~---  165 (465)
                      ..+.++....   .        .+.      +.                              ....+||+|+|.+.   
T Consensus        87 v~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l  166 (536)
T 3vue_A           87 VDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGP  166 (536)
T ss_dssp             EEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGST
T ss_pred             ceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHH
Confidence            1222221100   0        000      00                              12456788899762   


Q ss_pred             hhHHhh---------hcCCcEEEEecchhHHHHh-hhhhhhhhhcCCCCCCCch----hhhh--hhhHHHHHHHHhhccc
Q 044542          166 LPHWRA---------KMVPNVAVTWHGIWYEVMH-SKLFGELFSNQNGVLPGSM----TELQ--EAMPRLVDEIRFFSSY  229 (465)
Q Consensus       166 ~~~~~~---------~~~p~~v~~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~  229 (465)
                      .+.++.         .++| +|+|+|++.+.... ........   .+......    ....  ......-..+..+..|
T Consensus       167 ~~~~l~~~~~~~~~~~~~~-~V~TiHnl~~qg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~a  242 (536)
T 3vue_A          167 LASYLKNNYQPNGIYRNAK-VAFCIHNISYQGRFAFEDYPELN---LSERFRSSFDFIDGYDTPVEGRKINWMKAGILEA  242 (536)
T ss_dssp             HHHHHHHHTTTTTSSTTCE-EEEEESCTTCCCEEEGGGGGGGC---CCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHC
T ss_pred             HHHHHHHhhhhhhhhcccc-eeeeecCcccccccchhhhhhcC---CchhhcchhhhhhcccccccccchhHHHHHHHhc
Confidence            222222         2456 99999986422100 00000000   00000000    0000  0000000112556789


Q ss_pred             CEEEEeChhHHHHHHHHhC--------CCCCCEEEecCCCCCCCccCCccc------------------CcccccccCCC
Q 044542          230 NQHICISNSAAEVLVKIYQ--------LPQRNVHVILNGVDETKFVHDPEA------------------GVRFPEKLGVP  283 (465)
Q Consensus       230 d~ii~~S~~~~~~~~~~~~--------~~~~ki~vi~ngvd~~~~~~~~~~------------------~~~~r~~~g~~  283 (465)
                      |.|+++|+..++.+.+.++        ....++.+|+||||.+.|.|..+.                  +..+++.+|++
T Consensus       243 d~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~  322 (536)
T 3vue_A          243 DRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLP  322 (536)
T ss_dssp             SEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSC
T ss_pred             cEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCC
Confidence            9999999999998877553        235789999999999999875321                  22345567776


Q ss_pred             CC-CcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--hHHH----HhcCCeEEcCCCChhHHHHHHH
Q 044542          284 AN-VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--RRYA----ELGQNVKVLGALEAHQLSEFYN  356 (465)
Q Consensus       284 ~~-~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--~~~~----~l~~~V~~~g~v~~~~~~~~~~  356 (465)
                      .+ +..+|+++||+.++||++.+++|++++.++  +.+++++|.|+..  ..++    .+..+|.+.+..+.+++..+|+
T Consensus       323 ~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  400 (536)
T 3vue_A          323 VDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMA  400 (536)
T ss_dssp             CCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHH
T ss_pred             CCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHH
Confidence            43 236777999999999999999999999774  5688888877543  2222    2348999999999999999999


Q ss_pred             hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceE----------EeCC-CHHHHHHHHHHHHh--
Q 044542          357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGY----------TFSP-NVKSFVEALELVIR--  423 (465)
Q Consensus       357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~----------l~~~-d~~~la~~i~~ll~--  423 (465)
                      .||++|+||.+ |+||++++|||+||+|||+|++||++ |+|.++.+|+          ++++ |+++|+++|.++++  
T Consensus       401 ~aD~~v~PS~~-E~fgl~~lEAma~G~PvI~s~~gG~~-e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~  478 (536)
T 3vue_A          401 GADVLAVPSRF-EPCGLIQLQGMRYGTPCACASTGGLV-DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVV  478 (536)
T ss_dssp             HCSEEEECCSC-CSSCSHHHHHHHTTCCEEECSCTHHH-HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred             hhheeeccccc-CCCCHHHHHHHHcCCCEEEcCCCCch-heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhc
Confidence            99999999986 99999999999999999999999999 9999999998          6677 89999999998886  


Q ss_pred             CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          424 DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      + .+.++++.+++   ++++|||++++++|+++|+++.
T Consensus       479 ~-~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~  512 (536)
T 3vue_A          479 G-TPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG  512 (536)
T ss_dssp             T-SHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred             C-cHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence            4 34566666554   5678999999999999999874

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=1.6e-43  Score=347.57  Aligned_cols=344  Identities=22%  Similarity=0.292  Sum_probs=258.6

Q ss_pred             CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC---ccc---CCcceEEEeecCCC---
Q 044542           76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN---DVH---QGNLHVHFAANDHG---  146 (465)
Q Consensus        76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~~~---~~~~~v~~~~~~~~---  146 (465)
                      .+++|||+++++.+    ..||+++++..++++|.+.||+|++++.........   ...   .....+.+......   
T Consensus        37 ~~~~mkIl~v~~~~----~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (416)
T 2x6q_A           37 KLKGRSFVHVNSTS----FGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYL  112 (416)
T ss_dssp             TTTTCEEEEEESCS----SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHH
T ss_pred             hhhccEEEEEeCCC----CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccHHHHHHHH
Confidence            45679999999863    579999999999999999999999998765321100   000   00000000000000   


Q ss_pred             -----ccccCCCCCCcEEEecCCchh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHH
Q 044542          147 -----SVNLNNDGAFDYVHTESVSLP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPR  218 (465)
Q Consensus       147 -----~~~~~~~~~~DiI~~~~~~~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (465)
                           .....+..+||+||+|+....   .......| ++++.|+....               +     .......+. 
T Consensus       113 ~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~---------------~-----~~~~~~~~~-  170 (416)
T 2x6q_A          113 NVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSP-WLWRCHIDLSS---------------P-----NREFWEFLR-  170 (416)
T ss_dssp             HHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSC-EEEECCSCCSS---------------C-----CHHHHHHHH-
T ss_pred             HHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCC-EEEEEccccCC---------------c-----cHHHHHHHH-
Confidence                 011125668999999985322   22233456 99999974311               0     011112221 


Q ss_pred             HHHHHHhhcccCEEE-EeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCc---ccCcccccccCCCCCCcEEEEEee
Q 044542          219 LVDEIRFFSSYNQHI-CISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDP---EAGVRFPEKLGVPANVSLVMGVAG  294 (465)
Q Consensus       219 ~~~~~~~~~~~d~ii-~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~---~~~~~~r~~~g~~~~~~~~l~~~G  294 (465)
                           +.+.++|.++ ++|+..++      +++..++.+||||+|...+.+..   .....++++++++++. .+++++|
T Consensus       171 -----~~~~~~~~~i~~~s~~~~~------~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vG  238 (416)
T 2x6q_A          171 -----RFVEKYDRYIFHLPEYVQP------ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEK-PIITQVS  238 (416)
T ss_dssp             -----HHHTTSSEEEESSGGGSCT------TSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTS-CEEEEEC
T ss_pred             -----HHHHhCCEEEEechHHHHh------hCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCC-cEEEEEe
Confidence                 4456788776 56665543      24457899999999987665322   2234577888888776 6777999


Q ss_pred             ccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcc-----hhHHH----Hhc--CCeEEcCCCC---hhHHHHHHHhcCe
Q 044542          295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW-----GRRYA----ELG--QNVKVLGALE---AHQLSEFYNALDV  360 (465)
Q Consensus       295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-----~~~~~----~l~--~~V~~~g~v~---~~~~~~~~~~aDv  360 (465)
                      |+.+.||++.+++|++.+.+++|+++|+|+|+|+.     .+.++    +++  ++|.|+|+++   ++++.++|+.||+
T Consensus       239 rl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~  318 (416)
T 2x6q_A          239 RFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDV  318 (416)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSE
T ss_pred             ccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCE
Confidence            99999999999999999998889999999999864     22233    333  7999999664   6899999999999


Q ss_pred             EEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542          361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHA  440 (465)
Q Consensus       361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~  440 (465)
                      +|+||.+ ||+|++++|||+||+|||+++.||.+ +++.++.+|++++ |+++++++|.+++++ ++.++++++++++++
T Consensus       319 ~v~ps~~-E~~~~~~lEAma~G~PvI~~~~~g~~-e~i~~~~~g~l~~-d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~  394 (416)
T 2x6q_A          319 ILQMSIR-EGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVDGETGFLVR-DANEAVEVVLYLLKH-PEVSKEMGAKAKERV  394 (416)
T ss_dssp             EEECCSS-CSSCHHHHHHHHTTCCEEEESCHHHH-HHCCBTTTEEEES-SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred             EEECCCc-CCCccHHHHHHHcCCCEEEccCCCCh-hheecCCCeEEEC-CHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence            9999986 99999999999999999999999998 8999999999999 999999999999998 899999999999999


Q ss_pred             HhhCCHHHHHHHHHHHHHHhc
Q 044542          441 LSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       441 ~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      +++|+|+.++++|.++|++++
T Consensus       395 ~~~fs~~~~~~~~~~~~~~l~  415 (416)
T 2x6q_A          395 RKNFIITKHMERYLDILNSLG  415 (416)
T ss_dssp             HHHTBHHHHHHHHHHHHHTC-
T ss_pred             HHHcCHHHHHHHHHHHHHHhh
Confidence            988999999999999999875

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=2.4e-43  Score=346.05  Aligned_cols=336  Identities=14%  Similarity=0.139  Sum_probs=260.0

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccC--CcceEE-EeecC--CCccc----c
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQ--GNLHVH-FAAND--HGSVN----L  150 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--~~~~v~-~~~~~--~~~~~----~  150 (465)
                      |||+++++.+|   ..||+++++..|+++|++. |+|++++....+........  ...... .....  ...+.    .
T Consensus         1 MkI~~v~~~~p---~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (413)
T 3oy2_A            1 MKLIIVGAHSS---VPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEF   76 (413)
T ss_dssp             CEEEEEEECTT---CCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHH
T ss_pred             CeEEEecCCCC---CCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHH
Confidence            89999998764   5699999999999999999 99999997765322111000  000000 00000  01111    1


Q ss_pred             CCCCCCcEEEecCCchh--HH--hhhcCC---cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH
Q 044542          151 NNDGAFDYVHTESVSLP--HW--RAKMVP---NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI  223 (465)
Q Consensus       151 ~~~~~~DiI~~~~~~~~--~~--~~~~~p---~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (465)
                      .+..+||+||+|.+...  .+  ...++|   +.+..+|.....                        ....+      +
T Consensus        77 l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~------~  126 (413)
T 3oy2_A           77 IDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKN------------------------IRENL------W  126 (413)
T ss_dssp             HHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBS------------------------CCGGG------G
T ss_pred             HHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchh------------------------hHHHH------H
Confidence            15668999999965211  11  112333   245555542100                        00001      1


Q ss_pred             HhhcccC--EEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCC--CCcEEEEEeeccccc
Q 044542          224 RFFSSYN--QHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPA--NVSLVMGVAGRLVRD  299 (465)
Q Consensus       224 ~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~--~~~~~l~~~Grl~~~  299 (465)
                      .+++++|  .++++|+..++.+.+ ++. +.++.++|||+|.+.|       ...++++++++  +. ++++++||+.+.
T Consensus       127 ~~~~~~~~~~ii~~S~~~~~~~~~-~~~-~~~~~vi~ngvd~~~~-------~~~~~~~~~~~~~~~-~~il~vGr~~~~  196 (413)
T 3oy2_A          127 WIFSHPKVVGVMAMSKCWISDICN-YGC-KVPINIVSHFVDTKTI-------YDARKLVGLSEYNDD-VLFLNMNRNTAR  196 (413)
T ss_dssp             GGGGCTTEEEEEESSTHHHHHHHH-TTC-CSCEEECCCCCCCCCC-------TTHHHHTTCGGGTTS-EEEECCSCSSGG
T ss_pred             HHHhccCCceEEEcCHHHHHHHHH-cCC-CCceEEeCCCCCHHHH-------HHHHHhcCCCcccCc-eEEEEcCCCchh
Confidence            5678888  999999999999999 776 6899999999999877       34566777765  44 888899999999


Q ss_pred             cCHHHHHHHHHHhhhcCCCeEEEEEeCCcch------hHHHH----hc--CC-------eEEcCCCChhHHHHHHHhcCe
Q 044542          300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWG------RRYAE----LG--QN-------VKVLGALEAHQLSEFYNALDV  360 (465)
Q Consensus       300 Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~------~~~~~----l~--~~-------V~~~g~v~~~~~~~~~~~aDv  360 (465)
                      ||++.+++|++.+.+++|+++|+|+|+|+..      +.+++    ++  ++       |.+.|+++++++.++|+.||+
T Consensus       197 Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv  276 (413)
T 3oy2_A          197 KRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDV  276 (413)
T ss_dssp             GTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSE
T ss_pred             cCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCE
Confidence            9999999999999998999999999998653      55554    33  44       888999999999999999999


Q ss_pred             EEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCc---------------eE--EeCC-CHHHHHHHHHHHH
Q 044542          361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEEL---------------GY--TFSP-NVKSFVEALELVI  422 (465)
Q Consensus       361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~---------------G~--l~~~-d~~~la~~i~~ll  422 (465)
                      +|+||.+ ||||++++|||+||+|||+++.||.+ |++.++.+               |+  ++++ |+++++++| +++
T Consensus       277 ~v~pS~~-E~~~~~~lEAma~G~PvI~s~~~g~~-e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~  353 (413)
T 3oy2_A          277 IVNCSSG-EGFGLCSAEGAVLGKPLIISAVGGAD-DYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF  353 (413)
T ss_dssp             EEECCSC-CSSCHHHHHHHTTTCCEEEECCHHHH-HHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT
T ss_pred             EEeCCCc-CCCCcHHHHHHHcCCCEEEcCCCChH-HHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHh
Confidence            9999985 99999999999999999999999998 88888777               88  9998 999999999 999


Q ss_pred             hCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542          423 RDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                      ++ ++.+++++++++++++++|||+.++++|.++|++++++
T Consensus       354 ~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  393 (413)
T 3oy2_A          354 KD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV  393 (413)
T ss_dssp             TS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred             cC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence            98 99999999999999998899999999999999998865

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=1e-41  Score=351.87  Aligned_cols=369  Identities=14%  Similarity=0.109  Sum_probs=267.4

Q ss_pred             CCceeEEEEeCCCC-------CCCCCChHHHHHHH--------HHHHHHhCCcEEE----EEeCCCCCCCCC------c-
Q 044542           77 FEKLKLAVFSKTWP-------IGAAPGGMERHAST--------LYHALAARGHEIH----VFTAPSDRKPHN------D-  130 (465)
Q Consensus        77 ~~~mkIl~v~~~~p-------~~~~~gG~~~~~~~--------l~~~L~~~G~~V~----v~~~~~~~~~~~------~-  130 (465)
                      +..|+|++++..-.       ..+..||...++.+        |+++|+++||+|+    |+|....+....      + 
T Consensus       276 ~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~  355 (816)
T 3s28_A          276 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLER  355 (816)
T ss_dssp             CCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEE
T ss_pred             CceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCccee
Confidence            34589999997421       12478999999984        6666778999876    898775443111      1 


Q ss_pred             cc-CCcceEEEeecCC------------CccccC--------------CCCCCcEEEecCCc--hhHH---hhhcCCcEE
Q 044542          131 VH-QGNLHVHFAANDH------------GSVNLN--------------NDGAFDYVHTESVS--LPHW---RAKMVPNVA  178 (465)
Q Consensus       131 ~~-~~~~~v~~~~~~~------------~~~~~~--------------~~~~~DiI~~~~~~--~~~~---~~~~~p~~v  178 (465)
                      .. ..+..|...+..+            ..|.+.              ...+|||||+|.+.  +..+   ...++| ++
T Consensus       356 i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP-~V  434 (816)
T 3s28_A          356 VYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT-QC  434 (816)
T ss_dssp             CTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCC-EE
T ss_pred             ecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCC-EE
Confidence            11 1233333332211            112211              34589999999642  1122   223678 99


Q ss_pred             EEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH---hC-------
Q 044542          179 VTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI---YQ-------  248 (465)
Q Consensus       179 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---~~-------  248 (465)
                      .+.|+.........          ..........+....++..+...++.+|.||++|+..++.+.+.   |+       
T Consensus       435 ~T~Hsl~~~k~~~~----------~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~  504 (816)
T 3s28_A          435 TIAHALEKTKYPDS----------DIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTL  504 (816)
T ss_dssp             EECSCCHHHHSTTT----------TTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEE
T ss_pred             EEEecccccccccc----------cchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhcccc
Confidence            99998754321100          00000001122223344445578899999999999988853221   11       


Q ss_pred             -----------CCCCCEEEecCCCCCCCccCCcccC-----------------cccccccCC--CCCCcEEEEEeecccc
Q 044542          249 -----------LPQRNVHVILNGVDETKFVHDPEAG-----------------VRFPEKLGV--PANVSLVMGVAGRLVR  298 (465)
Q Consensus       249 -----------~~~~ki~vi~ngvd~~~~~~~~~~~-----------------~~~r~~~g~--~~~~~~~l~~~Grl~~  298 (465)
                                 ....|+.|||||+|.+.|.+.....                 ...++.+|+  +.+. .+|+++||+.+
T Consensus       505 p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~-~vIl~vGRl~~  583 (816)
T 3s28_A          505 PGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKK-PILFTMARLDR  583 (816)
T ss_dssp             TTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTS-CEEEEECCCCT
T ss_pred             chhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCC-eEEEEEccCcc
Confidence                       1223999999999999997754322                 245667776  4444 67889999999


Q ss_pred             ccCHHHHHHHHHHhhhcCCCeEEEEEeCCc-----------chhHHHH----hc--CCeEEcCCC----ChhHHHHHHH-
Q 044542          299 DKGHPLLYEAFSSITRDHPGVYLLVAGTGP-----------WGRRYAE----LG--QNVKVLGAL----EAHQLSEFYN-  356 (465)
Q Consensus       299 ~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~-----------~~~~~~~----l~--~~V~~~g~v----~~~~~~~~~~-  356 (465)
                      .||++.+++|++.+.+.+++++|+|+|+|+           ..+.+++    ++  ++|.|+|++    +.+++..+|+ 
T Consensus       584 ~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~  663 (816)
T 3s28_A          584 VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICD  663 (816)
T ss_dssp             TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHh
Confidence            999999999999998877899999999988           2333333    33  899999955    4588999998 


Q ss_pred             hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHH----hCChHHHHH
Q 044542          357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVI----RDGPKVLQR  431 (465)
Q Consensus       357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll----~~~~~~~~~  431 (465)
                      ++|++|+||.+ |+||++++|||+||+|||+|+.||.+ +++.++.+|+++++ |+++++++|.+++    .+ ++.+++
T Consensus       664 aaDvfV~PS~~-EgfglvllEAMA~G~PVIasd~GG~~-EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~~~~  740 (816)
T 3s28_A          664 TKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPA-EIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED-PSHWDE  740 (816)
T ss_dssp             TTCEEEECCSC-BSSCHHHHHHHHTTCCEEEESSBTHH-HHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC-THHHHH
T ss_pred             cCeEEEECCCc-cCccHHHHHHHHcCCCEEEeCCCChH-HHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccC-HHHHHH
Confidence            68999999986 99999999999999999999999998 89999999999999 9999999997776    77 899999


Q ss_pred             HHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          432 KGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       432 ~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      ++++++++++++|||+.+++++.++|+..
T Consensus       741 m~~~ar~~a~~~fSwe~~a~~ll~lY~~~  769 (816)
T 3s28_A          741 ISKGGLQRIEEKYTWQIYSQRLLTLTGVY  769 (816)
T ss_dssp             HHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            99999999988999999999999999864

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=4.1e-42  Score=332.58  Aligned_cols=347  Identities=16%  Similarity=0.177  Sum_probs=258.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCc------------
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGS------------  147 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------  147 (465)
                      |||+++++.++   ..||.++++.+++++|+++||+|++++........     .+..+...+.....            
T Consensus         1 MkIl~i~~~~~---~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~l   72 (374)
T 2iw1_A            1 MIVAFCLYKYF---PFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-----KAFELIQVPVKSHTNHGRNAEYYAWV   72 (374)
T ss_dssp             -CEEEECSEEC---TTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-----TTCEEEECCCCCSSHHHHHHHHHHHH
T ss_pred             CeEEEEEeecC---CCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCC-----CCcEEEEEccCcccchhhHHHHHHHH
Confidence            89999999864   25999999999999999999999999987432211     12334333322110            


Q ss_pred             cccCCCCCCcEEEecCCchhHHhhhcCCcEEEEecchhHHHH--hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          148 VNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVM--HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       148 ~~~~~~~~~DiI~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                      ....++.+||+||+++......       .....+.......  .........         ........+.     +..
T Consensus        73 ~~~i~~~~~Dvv~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-----~~~  131 (374)
T 2iw1_A           73 QNHLKEHPADRVVGFNKMPGLD-------VYFAADVCYAEKVAQEKGFLYRLT---------SRYRHYAAFE-----RAT  131 (374)
T ss_dssp             HHHHHHSCCSEEEESSCCTTCS-------EEECCSCCHHHHHHHHCCHHHHTS---------HHHHHHHHHH-----HHH
T ss_pred             HHHHhccCCCEEEEecCCCCce-------eeeccccccceeeeecccchhhhc---------HHHHHHHHHH-----HHH
Confidence            0011567899999987432110       1111111110000  000000000         0001111111     123


Q ss_pred             h--cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc--cCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          226 F--SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE--AGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       226 ~--~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~--~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      +  +.+|.++++|+..++.+.+.+|++..++.++|||+|.+.|.+...  .+..+++++|++++. .+++++|++.+.||
T Consensus       132 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~K~  210 (374)
T 2iw1_A          132 FEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-NLLLQVGSDFGRKG  210 (374)
T ss_dssp             HSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-EEEEEECSCTTTTT
T ss_pred             hhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCC-eEEEEeccchhhcC
Confidence            3  379999999999999999988998899999999999988766432  234578888988766 78889999999999


Q ss_pred             HHHHHHHHHHhhhc-CCCeEEEEEeCCcchh---HHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542          302 HPLLYEAFSSITRD-HPGVYLLVAGTGPWGR---RYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL  375 (465)
Q Consensus       302 ~~~ll~a~~~l~~~-~~~~~l~ivG~g~~~~---~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~  375 (465)
                      ++.+++|++.+.++ +++++|+++|+|+..+   ..++++  ++|+|+|+.  +++.++|+.||++|+||.+ |++|+++
T Consensus       211 ~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ps~~-e~~~~~~  287 (374)
T 2iw1_A          211 VDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQ-EAAGIVL  287 (374)
T ss_dssp             HHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSC-CSSCHHH
T ss_pred             HHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEEecccc-CCcccHH
Confidence            99999999999776 5789999999987432   223333  799999985  7899999999999999976 9999999


Q ss_pred             HHHHHcCCeEEecCCCCcceeeeeeCCceEEeC-C-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542          376 IEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFS-P-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY  453 (465)
Q Consensus       376 ~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~-~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  453 (465)
                      +|||++|+|||+++.++.. +++.++.+|++++ + |+++++++|.+++++ ++.++++++++++++++ ++|+.+++++
T Consensus       288 ~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~  364 (374)
T 2iw1_A          288 LEAITAGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLPEKA  364 (374)
T ss_dssp             HHHHHHTCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH-SCCSCHHHHH
T ss_pred             HHHHHCCCCEEEecCCCch-hhhccCCceEEeCCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence            9999999999999999998 8889999999998 7 999999999999998 89999999999999987 7999999999


Q ss_pred             HHHHHHhcC
Q 044542          454 ERFFLRMKN  462 (465)
Q Consensus       454 ~~~~~~~~~  462 (465)
                      .++++..++
T Consensus       365 ~~~l~~~l~  373 (374)
T 2iw1_A          365 ADIITGGLD  373 (374)
T ss_dssp             HHHHHCC--
T ss_pred             HHHHHHhhc
Confidence            999987654

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=5.4e-42  Score=327.75  Aligned_cols=308  Identities=16%  Similarity=0.150  Sum_probs=242.9

Q ss_pred             CCceeEEEEeCC-----------CCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC
Q 044542           77 FEKLKLAVFSKT-----------WPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH  145 (465)
Q Consensus        77 ~~~mkIl~v~~~-----------~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~  145 (465)
                      |++|||+++++.           +|+ ...||.++++..++++|.+.||+|++++........     ..  +.......
T Consensus         1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~-----~~--~~~~~~~~   72 (342)
T 2iuy_A            1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR-----PG--LTVVPAGE   72 (342)
T ss_dssp             --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----TT--EEECSCCS
T ss_pred             CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----Cc--ceeccCCc
Confidence            346999999988           332 246999999999999999999999999987644321     11  22221110


Q ss_pred             --CccccCCCCCCcEEEecCCchhHH--hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHH
Q 044542          146 --GSVNLNNDGAFDYVHTESVSLPHW--RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVD  221 (465)
Q Consensus       146 --~~~~~~~~~~~DiI~~~~~~~~~~--~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (465)
                        ......++.+||+||+|.......  ...++|  ++++|+....                                  
T Consensus        73 ~~~l~~~l~~~~~Dvi~~~~~~~~~~~~~~~~~p--v~~~h~~~~~----------------------------------  116 (342)
T 2iuy_A           73 PEEIERWLRTADVDVVHDHSGGVIGPAGLPPGTA--FISSHHFTTR----------------------------------  116 (342)
T ss_dssp             HHHHHHHHHHCCCSEEEECSSSSSCSTTCCTTCE--EEEEECSSSB----------------------------------
T ss_pred             HHHHHHHHHhcCCCEEEECCchhhHHHHhhcCCC--EEEecCCCCC----------------------------------
Confidence              111122566999999998543222  223445  8899985311                                  


Q ss_pred             HHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          222 EIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       222 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                          ...+|.++++|+..++.+.+     ..++.+||||+|.+.+.+....         .+ ++ .+++++||+.+.||
T Consensus       117 ----~~~~d~ii~~S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~~---------~~-~~-~~i~~vG~~~~~Kg  176 (342)
T 2iuy_A          117 ----PVNPVGCTYSSRAQRAHCGG-----GDDAPVIPIPVDPARYRSAADQ---------VA-KE-DFLLFMGRVSPHKG  176 (342)
T ss_dssp             ----CSCCTTEEESCHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTTC---------CC-CC-SCEEEESCCCGGGT
T ss_pred             ----cccceEEEEcCHHHHHHHhc-----CCceEEEcCCCChhhcCccccc---------CC-CC-CEEEEEeccccccC
Confidence                01189999999999988765     5789999999998877654321         11 22 35779999999999


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEEeccc---------CC
Q 044542          302 HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTL---------RP  368 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~---------~~  368 (465)
                      ++.+++|++.+     +++|+|+|+|+..+.++++    +++|+|+|+++++++.++|+.||++++||.         +.
T Consensus       177 ~~~li~a~~~~-----~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~  251 (342)
T 2iuy_A          177 ALEAAAFAHAC-----GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWC  251 (342)
T ss_dssp             HHHHHHHHHHH-----TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCC
T ss_pred             HHHHHHHHHhc-----CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccc
Confidence            99999999987     6889999999877666554    489999999999999999999999999997         24


Q ss_pred             CCCcHHHHHHHHcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542          369 QGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA  446 (465)
Q Consensus       369 eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  446 (465)
                      ||+|++++|||++|+|||+++.|+.. |++.+  +.+|+++++|+++++++|.++++         +++++++++++|+|
T Consensus       252 E~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~  321 (342)
T 2iuy_A          252 EPGATVVSEAAVSGTPVVGTGNGCLA-EIVPSVGEVVGYGTDFAPDEARRTLAGLPA---------SDEVRRAAVRLWGH  321 (342)
T ss_dssp             CCCCHHHHHHHHTTCCEEECCTTTHH-HHGGGGEEECCSSSCCCHHHHHHHHHTSCC---------HHHHHHHHHHHHBH
T ss_pred             cCccHHHHHHHhcCCCEEEcCCCChH-HHhcccCCCceEEcCCCHHHHHHHHHHHHH---------HHHHHHHHHHhcCH
Confidence            99999999999999999999999998 88888  88999998899999999998876         57788888888999


Q ss_pred             HHHHHHHHHHHHHhcCC
Q 044542          447 TKMASAYERFFLRMKNP  463 (465)
Q Consensus       447 ~~~~~~~~~~~~~~~~~  463 (465)
                      +++++++.++|++++++
T Consensus       322 ~~~~~~~~~~~~~~~~~  338 (342)
T 2iuy_A          322 VTIAERYVEQYRRLLAG  338 (342)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHcc
Confidence            99999999999998765

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=100.00  E-value=3.1e-39  Score=314.47  Aligned_cols=339  Identities=10%  Similarity=0.031  Sum_probs=228.7

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cccCCcce----------EEEeecCC
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DVHQGNLH----------VHFAANDH  145 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~----------v~~~~~~~  145 (465)
                      .++|||+++++.|+++...||. +.+.+++++|+++||+|+|++......... ........          ........
T Consensus        44 ~~~mrI~~v~~~~~p~~~~GG~-~~v~~la~~L~~~GheV~Vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  122 (413)
T 2x0d_A           44 IKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEEDKDFALQIVPFND  122 (413)
T ss_dssp             CCSCEEEEEESCCCGGGCSHHH-HHHHHHHTTSCTTTCEEEEEESSCCCCHHHHGGGTTSEECCTTCCCCCSEEEEECSC
T ss_pred             CCCceEEEEeCCCCccccccHH-HHHHHHHHHHHHcCCceEEEEecCCCChHHHHhhhccceeeccCCccccceeeeccc
Confidence            4579999999998753234554 568999999999999999999875321000 00000000          00000000


Q ss_pred             CccccCCCCCCcEEEecCCchhHHhhh------------cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhh
Q 044542          146 GSVNLNNDGAFDYVHTESVSLPHWRAK------------MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ  213 (465)
Q Consensus       146 ~~~~~~~~~~~DiI~~~~~~~~~~~~~------------~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (465)
                      .........++|+||++.+........            ..+ .+..+|+.+..     +.        +.      ...
T Consensus       123 ~~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~-----~~--------~~------~~~  182 (413)
T 2x0d_A          123 RYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNK-ILYIIQDFEPG-----FY--------QW------SSQ  182 (413)
T ss_dssp             CTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCC-EEEEECSCGGG-----GS--------CS------SHH
T ss_pred             cccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCc-EEEEEeechhh-----cC--------cc------ChH
Confidence            000001234799999997532222111            224 67677775321     00        00      000


Q ss_pred             hhhHHHHHHHHhhcccC--EEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEE
Q 044542          214 EAMPRLVDEIRFFSSYN--QHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMG  291 (465)
Q Consensus       214 ~~~~~~~~~~~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~  291 (465)
                      ..     .....++.++  .++++|+++++.+.+ +|++..++.++|||+|.+.|.+..         .+ ..++ ..++
T Consensus       183 ~~-----~~~~~~~~~~~~~vi~~S~~~~~~l~~-~g~~~~~~~~i~~g~d~~~~~~~~---------~~-~~~~-~~il  245 (413)
T 2x0d_A          183 YV-----LAESTYKYRGPQIAVFNSELLKQYFNN-KGYNFTDEYFFQPKINTTLKNYIN---------DK-RQKE-KIIL  245 (413)
T ss_dssp             HH-----HHHHTTSCCSCEEEEEESHHHHHHHHH-HTCCCSEEEEECCCCCHHHHTTTT---------SC-CCCC-SEEE
T ss_pred             HH-----HHHHHhccCCceEEEEcCHHHHHHHHH-cCCCCCceEEeCCCcCchhhcccc---------cc-cCCC-CEEE
Confidence            01     1124455555  589999999999988 576667899999999976553311         01 1122 3455


Q ss_pred             Eeecc-ccccCHHHHHHHHHHhhhcCCC---eEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccC
Q 044542          292 VAGRL-VRDKGHPLLYEAFSSITRDHPG---VYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR  367 (465)
Q Consensus       292 ~~Grl-~~~Kg~~~ll~a~~~l~~~~~~---~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~  367 (465)
                      ++||+ .+.||++.+++|++.+.+++|+   ++|+++|+|+....+ .+.++|+|+|+++.+++.++|+.||++++||..
T Consensus       246 ~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~~l-~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~  324 (413)
T 2x0d_A          246 VYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDIAL-GKGIHLNSLGKLTLEDYADLLKRSSIGISLMIS  324 (413)
T ss_dssp             EEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCEEE-ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSS
T ss_pred             EEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhhhc-CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCC
Confidence            88996 6789999999999999887775   899999998764221 123789999999999999999999999999976


Q ss_pred             CCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542          368 PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA  446 (465)
Q Consensus       368 ~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  446 (465)
                       |+||++++||||||+|||+++ +|.. |++.++.+|+++++ |+++++++|.++++| ++.+++   ++++.++ .|+|
T Consensus       325 -E~~g~~~lEAmA~G~PVV~~~-~g~~-e~v~~~~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~---~~~~~~~-~~~W  396 (413)
T 2x0d_A          325 -PHPSYPPLEMAHFGLRVITNK-YENK-DLSNWHSNIVSLEQLNPENIAETLVELCMS-FNNRDV---DKKESSN-MMFY  396 (413)
T ss_dssp             -SSCCSHHHHHHHTTCEEEEEC-BTTB-CGGGTBTTEEEESSCSHHHHHHHHHHHHHH-TC----------CCBS-CGGG
T ss_pred             -CCCCcHHHHHHhCCCcEEEeC-CCcc-hhhhcCCCEEEeCCCCHHHHHHHHHHHHcC-HHHHHH---hHHHHHH-hCCH
Confidence             999999999999999999955 5666 88888999999999 999999999999998 666655   5666554 5999


Q ss_pred             HHHHHHHHHHHHHhcCC
Q 044542          447 TKMASAYERFFLRMKNP  463 (465)
Q Consensus       447 ~~~~~~~~~~~~~~~~~  463 (465)
                      +++.++ .++|+++.++
T Consensus       397 ~~~~~~-~~~~~~l~~~  412 (413)
T 2x0d_A          397 INEFNE-FSFIKEIEEK  412 (413)
T ss_dssp             CCCC----TTHHHHHTT
T ss_pred             HHHHHH-HHHHHHHHhh
Confidence            999888 6777776653

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=100.00  E-value=1.4e-33  Score=288.09  Aligned_cols=325  Identities=15%  Similarity=0.165  Sum_probs=240.2

Q ss_pred             CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHH--HHhCCcEEEEEeCCCCCCCCC--cccCCcceEEEeecCCCc---c
Q 044542           76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHA--LAARGHEIHVFTAPSDRKPHN--DVHQGNLHVHFAANDHGS---V  148 (465)
Q Consensus        76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~--L~~~G~~V~v~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~---~  148 (465)
                      ..++|||+++++.+    ..||+++++..+++.  +.+.||+|++++.........  .+.... .+..... ...   .
T Consensus       202 ~~~~~rI~~~~~~~----~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~l~  275 (568)
T 2vsy_A          202 SKGPLRVGFVSNGF----GAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVTA-LGHLATA  275 (568)
T ss_dssp             SSSCEEEEEEESCS----SSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECTT-CCHHHHH
T ss_pred             CCCCeEEEEECccc----ccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECCC-CCHHHHH
Confidence            45689999999986    347899999999999  788899999999754221111  122222 2211111 011   1


Q ss_pred             ccCCCCCCcEEEecCCc-----hhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH
Q 044542          149 NLNNDGAFDYVHTESVS-----LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI  223 (465)
Q Consensus       149 ~~~~~~~~DiI~~~~~~-----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (465)
                      ...++.+|||||.+...     +.....+..| +++++|+....                  ...     ..        
T Consensus       276 ~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------------------~~~-----~~--------  323 (568)
T 2vsy_A          276 KHIRHHGIDLLFDLRGWGGGGRPEVFALRPAP-VQVNWLAYPGT------------------SGA-----PW--------  323 (568)
T ss_dssp             HHHHHTTCSEEEECSSCTTCSSCHHHHTCCSS-EEEEESSSSSC------------------CCC-----TT--------
T ss_pred             HHHHhCCCCEEEECCCCCCcchHHHHhcCCCc-eeEeeecCCcc------------------cCC-----CC--------
Confidence            11267789999975421     2222233346 78888863210                  000     00        


Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP  303 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~  303 (465)
                      ..+..+|.++++|+..++     |+   +++.+|||.++.....+ .......|+++|++++. +++ ++|++.+ ||++
T Consensus       324 ~~~~~~d~~i~~s~~~~~-----~~---~~i~~ipn~~~~~~~~~-~~~~~~~r~~~~~~~~~-~v~-~~g~~~~-K~~~  391 (568)
T 2vsy_A          324 MDYVLGDAFALPPALEPF-----YS---EHVLRLQGAFQPSDTSR-VVAEPPSRTQCGLPEQG-VVL-CCFNNSY-KLNP  391 (568)
T ss_dssp             CCEEEECTTTSCTTTGGG-----CS---SEEEECSSCSCCCCTTC-CCCCCCCTGGGTCCTTS-CEE-EECCCGG-GCCH
T ss_pred             ceEEEECCCcCCcccccC-----Cc---ceeEcCCCcCCCCCCCC-CCCCCCCccccCCCCCC-EEE-EeCCccc-cCCH
Confidence            012346888888887543     33   78999999554332111 11234578899998765 555 8999999 9999


Q ss_pred             HHHHHHHHhhhcCCCeEEEEEe-CCcchhHHHH----hc---CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542          304 LLYEAFSSITRDHPGVYLLVAG-TGPWGRRYAE----LG---QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL  375 (465)
Q Consensus       304 ~ll~a~~~l~~~~~~~~l~ivG-~g~~~~~~~~----l~---~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~  375 (465)
                      .+++|+.++.++.|+++|+|+| +|+..+.+++    ++   ++|+|+|+++++++..+|+.+|++|+||.+  |+|+++
T Consensus       392 ~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~--~~g~~~  469 (568)
T 2vsy_A          392 QSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY--NAHTTA  469 (568)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS--CCSHHH
T ss_pred             HHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC--CCcHHH
Confidence            9999999998888999999999 8877665554    32   689999999999999999999999999975  999999


Q ss_pred             HHHHHcCCeEEe-------cCCC-------CcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHH-
Q 044542          376 IEAMHCGRTVLT-------PNYP-------SIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHA-  440 (465)
Q Consensus       376 ~EAma~G~PvI~-------s~~g-------g~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-  440 (465)
                      +|||+||+|||+       |+.+       |.+ +++.+         |+++++++|.+++++ ++.+++|++++++.+ 
T Consensus       470 lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~-e~v~~---------~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~  538 (568)
T 2vsy_A          470 SDALWTGCPVLTTPGETFAARVAGSLNHHLGLD-EMNVA---------DDAAFVAKAVALASD-PAALTALHARVDVLRR  538 (568)
T ss_dssp             HHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCG-GGBCS---------SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCEEeccCCCchHHHHHHHHHHCCCh-hhhcC---------CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhh
Confidence            999999999999       9999       887 66533         899999999999999 899999999999998 


Q ss_pred             -HhhCCHHHHHHHHHHHHHHhcCC
Q 044542          441 -LSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       441 -~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                       .+.|+|+.++++++++|+++.++
T Consensus       539 ~~~~f~~~~~~~~~~~~y~~~~~~  562 (568)
T 2vsy_A          539 ASGVFHMDGFADDFGALLQALARR  562 (568)
T ss_dssp             HSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHH
Confidence             67799999999999999988754

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=100.00  E-value=7.5e-34  Score=276.77  Aligned_cols=312  Identities=16%  Similarity=0.126  Sum_probs=215.4

Q ss_pred             CCceeEEEEeCC-CCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC-------C-------CCCcccCCcceEEEe
Q 044542           77 FEKLKLAVFSKT-WPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR-------K-------PHNDVHQGNLHVHFA  141 (465)
Q Consensus        77 ~~~mkIl~v~~~-~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~-------~-------~~~~~~~~~~~v~~~  141 (465)
                      .++|||++++.. ||  +..+|..   ..+++.|+++| +|+|++.....       .       ........+..+...
T Consensus        12 ~~~MkIl~is~~~~p--~~~~~~~---~~l~~~l~~~G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~   85 (406)
T 2hy7_A           12 IRRPCYLVLSSHDFR--TPRRANI---HFITDQLALRG-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLW   85 (406)
T ss_dssp             -CCSCEEEEESSCTT--SSSCCHH---HHHHHHHHHHS-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEEC
T ss_pred             CCCceEEEEecccCC--ChhhhhH---hHHHHHHHhCC-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEee
Confidence            446999999998 87  3445543   34677788889 99999543210       0       000001122333322


Q ss_pred             ecCCC------c----------cc----cC---C--CCCCcEEEecCCchhH--Hh--hhcCCcEEEEecchhHHHHhhh
Q 044542          142 ANDHG------S----------VN----LN---N--DGAFDYVHTESVSLPH--WR--AKMVPNVAVTWHGIWYEVMHSK  192 (465)
Q Consensus       142 ~~~~~------~----------~~----~~---~--~~~~DiI~~~~~~~~~--~~--~~~~p~~v~~~h~~~~~~~~~~  192 (465)
                      .....      .          +.    ..   +  ..++|+||.+......  .+  ..++| +++++|+.....    
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~DvIh~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~----  160 (406)
T 2hy7_A           86 RTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPA-AKLVYRASDGLS----  160 (406)
T ss_dssp             CBSSCCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHHHHCSEEEEESSGGGGGHHHHHHHCTT-SEEEEEESSCHH----
T ss_pred             ccccCCccccchhhhccchhHHHHHHHhHHHHHHHHhcCCCEEEECCchHHHHHHHHHHhCCC-EEEEEeccchhh----
Confidence            11100      0          00    00   1  1279999965433222  22  23567 889999753210    


Q ss_pred             hhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCccc
Q 044542          193 LFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA  272 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~  272 (465)
                         ...  .        ......+     ++..++++|.++++|+..++.+.+ ++    ++.+||||+|.+.|.+....
T Consensus       161 ---~~~--~--------~~~~~~~-----~~~~~~~ad~vi~~S~~~~~~~~~-~~----~i~vipngvd~~~f~~~~~~  217 (406)
T 2hy7_A          161 ---TIN--V--------ASYIERE-----FDRVAPTLDVIALVSPAMAAEVVS-RD----NVFHVGHGVDHNLDQLGDPS  217 (406)
T ss_dssp             ---HHT--C--------CHHHHHH-----HHHHGGGCSEEEESCGGGGGGCSC-ST----TEEECCCCBCTTHHHHHCSC
T ss_pred             ---ccc--c--------cHHHHHH-----HHHHHHhCCEEEEcCHHHHHHHHh-cC----CEEEEcCCcChHhcCccccc
Confidence               000  0        0111111     236688999999999999988765 23    89999999998877543211


Q ss_pred             CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh--cCCeEEcCCCChhH
Q 044542          273 GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL--GQNVKVLGALEAHQ  350 (465)
Q Consensus       273 ~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l--~~~V~~~g~v~~~~  350 (465)
                                +.+++.+++|+|++.+.||+      ++.+.++.++++|+|+|+|+    .+++  .++|+|+|++++++
T Consensus       218 ----------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l~ivG~g~----~~~~~l~~~V~f~G~~~~~~  277 (406)
T 2hy7_A          218 ----------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTFHVIGSGM----GRHPGYGDNVIVYGEMKHAQ  277 (406)
T ss_dssp             ----------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEEEEESCSS----CCCTTCCTTEEEECCCCHHH
T ss_pred             ----------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeEEEEEeCch----HHhcCCCCCEEEcCCCCHHH
Confidence                      12233678899999999998      34444456899999999987    3333  38999999999999


Q ss_pred             HHHHHHhcCeEEecccCCCCCcHHHHHHH-------HcCCeEEecCCCCcceeeeeeCCceEE-eCC-CHHHHHHHHHHH
Q 044542          351 LSEFYNALDVFVNPTLRPQGLDLTLIEAM-------HCGRTVLTPNYPSIVRTVVVNEELGYT-FSP-NVKSFVEALELV  421 (465)
Q Consensus       351 ~~~~~~~aDv~v~ps~~~eg~~~~~~EAm-------a~G~PvI~s~~gg~~~e~v~~~~~G~l-~~~-d~~~la~~i~~l  421 (465)
                      +.++|++||++|+||.. |++|++++|||       +||+|||+|+.       +.++.+|++ +++ |+++|+++|.++
T Consensus       278 l~~~~~~adv~v~ps~~-E~~~~~~lEAm~Kl~eYla~G~PVIas~~-------v~~~~~G~l~v~~~d~~~la~ai~~l  349 (406)
T 2hy7_A          278 TIGYIKHARFGIAPYAS-EQVPVYLADSSMKLLQYDFFGLPAVCPNA-------VVGPYKSRFGYTPGNADSVIAAITQA  349 (406)
T ss_dssp             HHHHHHTCSEEECCBSC-SCCCTTHHHHCHHHHHHHHHTCCEEEEGG-------GTCSCSSEEEECTTCHHHHHHHHHHH
T ss_pred             HHHHHHhcCEEEECCCc-ccCchHHHHHHHHHHHHhhCCCcEEEehh-------cccCcceEEEeCCCCHHHHHHHHHHH
Confidence            99999999999999975 99999999999       99999999986       455778999 998 999999999999


Q ss_pred             HhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH--HHHhc
Q 044542          422 IRDGPKVLQRKGLACKEHALSMFTATKMASAYERF--FLRMK  461 (465)
Q Consensus       422 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~--~~~~~  461 (465)
                      +++ ++         + ...+.|+|+.++++++++  |+++.
T Consensus       350 l~~-~~---------~-~~~~~~sw~~~a~~~~~~~~y~~~~  380 (406)
T 2hy7_A          350 LEA-PR---------V-RYRQCLNWSDTTDRVLDPRAYPETR  380 (406)
T ss_dssp             HHC-CC---------C-CCSCCCBHHHHHHHHHCGGGSGGGB
T ss_pred             HhC-cc---------h-hhhhcCCHHHHHHHHHHhhcccccC
Confidence            998 43         1 234669999999999999  87654

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=100.00  E-value=5e-33  Score=267.87  Aligned_cols=312  Identities=16%  Similarity=0.121  Sum_probs=227.2

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC--C---------c
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH--G---------S  147 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~--~---------~  147 (465)
                      +|||++++.      ..||.+..+..++++|.++||+|++++...... .......+..+.......  .         .
T Consensus         6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   78 (364)
T 1f0k_A            6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME-ADLVPKHGIEIDFIRISGLRGKGIKALIAAP   78 (364)
T ss_dssp             -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH-HHHGGGGTCEEEECCCCCCTTCCHHHHHTCH
T ss_pred             CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcch-hhhccccCCceEEecCCccCcCccHHHHHHH
Confidence            489999974      347999999999999999999999999865321 111222222333222110  0         0


Q ss_pred             c----------ccCCCCCCcEEEecCCc--hhHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhh
Q 044542          148 V----------NLNNDGAFDYVHTESVS--LPHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTEL  212 (465)
Q Consensus       148 ~----------~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (465)
                      +          ...++.+||+||++...  ....   ...++| ++++.|+....                       . 
T Consensus        79 ~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~~-----------------------~-  133 (364)
T 1f0k_A           79 LRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-VVLHEQNGIAG-----------------------L-  133 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-EEEEECSSSCC-----------------------H-
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCC-EEEEecCCCCc-----------------------H-
Confidence            0          00156689999999753  2222   223678 88888874200                       0 


Q ss_pred             hhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEE
Q 044542          213 QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGV  292 (465)
Q Consensus       213 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~  292 (465)
                         .     .+...+.+|.+++.++..         ++  ++.+++||+|.+.+.+..     .+++++++++++.++++
T Consensus       134 ---~-----~~~~~~~~d~v~~~~~~~---------~~--~~~~i~n~v~~~~~~~~~-----~~~~~~~~~~~~~il~~  189 (364)
T 1f0k_A          134 ---T-----NKWLAKIATKVMQAFPGA---------FP--NAEVVGNPVRTDVLALPL-----PQQRLAGREGPVRVLVV  189 (364)
T ss_dssp             ---H-----HHHHTTTCSEEEESSTTS---------SS--SCEECCCCCCHHHHTSCC-----HHHHHTTCCSSEEEEEE
T ss_pred             ---H-----HHHHHHhCCEEEecChhh---------cC--CceEeCCccchhhcccch-----hhhhcccCCCCcEEEEE
Confidence               1     113456789999988764         22  678999999987654421     24566776666567767


Q ss_pred             eeccccccCHHHHHHHHHHhhhcCCCeE-EEEEeCCcchhHHH----Hhc-CCeEEcCCCChhHHHHHHHhcCeEEeccc
Q 044542          293 AGRLVRDKGHPLLYEAFSSITRDHPGVY-LLVAGTGPWGRRYA----ELG-QNVKVLGALEAHQLSEFYNALDVFVNPTL  366 (465)
Q Consensus       293 ~Grl~~~Kg~~~ll~a~~~l~~~~~~~~-l~ivG~g~~~~~~~----~l~-~~V~~~g~v~~~~~~~~~~~aDv~v~ps~  366 (465)
                      .|++.+.||.+.+++|++.+.+   +++ ++++|+|+. +.++    +++ ++|.|+|++  +++.++|+.||++|+|| 
T Consensus       190 ~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G~~~~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s-  262 (364)
T 1f0k_A          190 GGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGSQ-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVCRS-  262 (364)
T ss_dssp             CTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTCH-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEECC-
T ss_pred             cCchHhHHHHHHHHHHHHHhcC---CcEEEEEcCCchH-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEECC-
Confidence            7899999999999999999865   677 677898874 3333    344 689999999  79999999999999998 


Q ss_pred             CCCCCcHHHHHHHHcCCeEEecCCCCcce------eeeeeCCceEEeCC-C--HHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542          367 RPQGLDLTLIEAMHCGRTVLTPNYPSIVR------TVVVNEELGYTFSP-N--VKSFVEALELVIRDGPKVLQRKGLACK  437 (465)
Q Consensus       367 ~~eg~~~~~~EAma~G~PvI~s~~gg~~~------e~v~~~~~G~l~~~-d--~~~la~~i~~ll~~~~~~~~~~~~~~~  437 (465)
                         | |++++|||++|+|||+++.+|..+      +.+.+.+.|+++++ |  +++++++|.++  | ++.+++++++++
T Consensus       263 ---g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~-~~~~~~~~~~~~  335 (364)
T 1f0k_A          263 ---G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S-RETLLTMAERAR  335 (364)
T ss_dssp             ---C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C-HHHHHHHHHHHH
T ss_pred             ---c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--C-HHHHHHHHHHHH
Confidence               2 899999999999999999998642      13444556999998 7  99999999999  6 899999999999


Q ss_pred             HHHHhhCCHHHHHHHHHHHHHHhc
Q 044542          438 EHALSMFTATKMASAYERFFLRMK  461 (465)
Q Consensus       438 ~~~~~~fs~~~~~~~~~~~~~~~~  461 (465)
                      +.++ .|+|++++++++++|++..
T Consensus       336 ~~~~-~~~~~~~~~~~~~~y~~~~  358 (364)
T 1f0k_A          336 AASI-PDATERVANEVSRVARALE  358 (364)
T ss_dssp             HTCC-TTHHHHHHHHHHHHHTTC-
T ss_pred             Hhhc-cCHHHHHHHHHHHHHHHHH
Confidence            9875 5999999999999998753

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=100.00  E-value=3.8e-33  Score=269.81  Aligned_cols=334  Identities=14%  Similarity=0.073  Sum_probs=229.5

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-C-cEEEEEeCCCCCCCCCcc-c-CCcce-EEEeecCC--Cc----
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-G-HEIHVFTAPSDRKPHNDV-H-QGNLH-VHFAANDH--GS----  147 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~~~~~~-~-~~~~~-v~~~~~~~--~~----  147 (465)
                      +|||++++...|   ..|    .+..++++|++. | |+|.+++........... . ..... +.......  ..    
T Consensus         8 ~mkIl~v~~~~~---~~~----~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (375)
T 3beo_A            8 RLKVMTIFGTRP---EAI----KMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDIT   80 (375)
T ss_dssp             CEEEEEEECSHH---HHH----HHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHH
T ss_pred             CceEEEEecCcH---HHH----HHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHH
Confidence            589999986532   112    345788888876 4 888777654432110110 0 01110 11111111  10    


Q ss_pred             -------cccCCCCCCcEEEecCCchhH------HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542          148 -------VNLNNDGAFDYVHTESVSLPH------WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE  214 (465)
Q Consensus       148 -------~~~~~~~~~DiI~~~~~~~~~------~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (465)
                             ....++.+||+||+|+.....      ....++| ++.+.|+...       +       .... .   ....
T Consensus        81 ~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip-~v~~~~~~~~-------~-------~~~~-~---~~~~  141 (375)
T 3beo_A           81 TRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIP-VGHVEAGLRT-------W-------DKYS-P---YPEE  141 (375)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCC-EEEESCCCCC-------S-------CTTS-S---TTHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEeccccc-------c-------cccC-C---ChhH
Confidence                   011156789999998652211      1233667 7777675310       0       0000 0   0111


Q ss_pred             hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCC-CCCCCccCCcccCcccccccCCCCCCcEEEEEe
Q 044542          215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVSLVMGVA  293 (465)
Q Consensus       215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~  293 (465)
                      ...+     ...+.+|.++++|+..++.+.+ +|++++++.+++|| +|...+.+.......+++++  + +++++++++
T Consensus       142 ~~~~-----~~~~~~d~ii~~s~~~~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~-~~~~vl~~~  212 (375)
T 3beo_A          142 MNRQ-----LTGVMADLHFSPTAKSATNLQK-ENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G-NNRLVLMTA  212 (375)
T ss_dssp             HHHH-----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T-TSEEEEEEC
T ss_pred             hhhh-----HHhhhhheeeCCCHHHHHHHHH-cCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c-CCCeEEEEe
Confidence            1111     1234589999999999999987 68888899999999 78665544321223344444  2 344778899


Q ss_pred             eccccc-cCHHHHHHHHHHhhhcCCCeEEEEEeCCcc---hhHHHHh-c--CCeEEcCCCChhHHHHHHHhcCeEEeccc
Q 044542          294 GRLVRD-KGHPLLYEAFSSITRDHPGVYLLVAGTGPW---GRRYAEL-G--QNVKVLGALEAHQLSEFYNALDVFVNPTL  366 (465)
Q Consensus       294 Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~---~~~~~~l-~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~  366 (465)
                      ||+.+. ||++.+++|++.+.+++|++++++ |.|+.   .+.++++ .  ++|+|+|+++..++..+|+.||++|+|| 
T Consensus       213 gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-  290 (375)
T 3beo_A          213 HRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-  290 (375)
T ss_dssp             CCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-
T ss_pred             cccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-
Confidence            999875 999999999999988888998655 65543   3344443 3  7999999999899999999999999988 


Q ss_pred             CCCCCcHHHHHHHHcCCeEEecCC-CCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCC
Q 044542          367 RPQGLDLTLIEAMHCGRTVLTPNY-PSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT  445 (465)
Q Consensus       367 ~~eg~~~~~~EAma~G~PvI~s~~-gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  445 (465)
                           |.+++|||++|+|||+++. ++.+ +++.++ +|+++++|+++++++|.+++++ ++.+++|+++++++. +.|+
T Consensus       291 -----g~~~lEA~a~G~Pvi~~~~~~~~~-e~v~~g-~g~~v~~d~~~la~~i~~ll~~-~~~~~~~~~~~~~~~-~~~~  361 (375)
T 3beo_A          291 -----GGVQEEAPSLGVPVLVLRDTTERP-EGIEAG-TLKLAGTDEETIFSLADELLSD-KEAHDKMSKASNPYG-DGRA  361 (375)
T ss_dssp             -----HHHHHHHHHHTCCEEECSSCCSCH-HHHHTT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHCCCCCTTC-CSCH
T ss_pred             -----CChHHHHHhcCCCEEEecCCCCCc-eeecCC-ceEEcCCCHHHHHHHHHHHHhC-hHhHhhhhhcCCCCC-CCcH
Confidence                 5679999999999999964 8877 777666 9999977999999999999998 899999999988876 4699


Q ss_pred             HHHHHHHHHHHHH
Q 044542          446 ATKMASAYERFFL  458 (465)
Q Consensus       446 ~~~~~~~~~~~~~  458 (465)
                      |+++++.+.++++
T Consensus       362 ~~~i~~~~~~~~~  374 (375)
T 3beo_A          362 SERIVEAILKHFN  374 (375)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988764

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=100.00  E-value=1.1e-33  Score=274.42  Aligned_cols=341  Identities=14%  Similarity=0.124  Sum_probs=236.3

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc-EEEEEeCCCCCCCCCc-ccC-Ccce-EEEeecC--CCcc-----
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH-EIHVFTAPSDRKPHND-VHQ-GNLH-VHFAAND--HGSV-----  148 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~-~~~-~~~~-v~~~~~~--~~~~-----  148 (465)
                      |||++++...      ++ ...+..++++|.++|+ ++.++........... ... .... +......  ....     
T Consensus         1 mkIl~v~~~~------~~-~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (384)
T 1vgv_A            1 MKVLTVFGTR------PE-AIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCR   73 (384)
T ss_dssp             CEEEEEECSH------HH-HHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHH
T ss_pred             CeEEEEeccc------HH-HHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHH
Confidence            7999998642      22 2346789999999984 8877655432221111 111 1110 1111100  0110     


Q ss_pred             ------ccCCCCCCcEEEecCC---chhHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhh
Q 044542          149 ------NLNNDGAFDYVHTESV---SLPHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAM  216 (465)
Q Consensus       149 ------~~~~~~~~DiI~~~~~---~~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (465)
                            ...++.+||+||+|+.   .+...   ...++| ++.+.|+....       .       .. .    .+....
T Consensus        74 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~-------~-------~~-~----~~~~~~  133 (384)
T 1vgv_A           74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP-VGHVEAGLRTG-------D-------LY-S----PWPEEA  133 (384)
T ss_dssp             HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC-EEEESCCCCCS-------C-------TT-S----STTHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEecccccc-------c-------cc-C----CCchHh
Confidence                  1116678999999864   12211   233678 88888875210       0       00 0    011111


Q ss_pred             HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCc-c----cCcccccccC-CCCCCcEE
Q 044542          217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDP-E----AGVRFPEKLG-VPANVSLV  289 (465)
Q Consensus       217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~-~----~~~~~r~~~g-~~~~~~~~  289 (465)
                      .+    ....+.+|.++++|+..++.+.+ +|++++++.+++||+ |...+.+.. .    .+..+++++| ++.+++++
T Consensus       134 ~~----~~~~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  208 (384)
T 1vgv_A          134 NR----TLTGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMI  208 (384)
T ss_dssp             HH----HHHHTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEE
T ss_pred             hH----HHHHhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEE
Confidence            11    11235699999999999999977 788888999999995 432221110 0    0124567777 76556678


Q ss_pred             EEEeeccccc-cCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHHh-c--CCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542          290 MGVAGRLVRD-KGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAEL-G--QNVKVLGALEAHQLSEFYNALDVFVN  363 (465)
Q Consensus       290 l~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~l-~--~~V~~~g~v~~~~~~~~~~~aDv~v~  363 (465)
                      ++++||+.+. ||++.+++|+..+.+++|+++++++ |.++ ..+.++++ .  ++|+|+|+++.+++.++|+.||++|+
T Consensus       209 l~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~  288 (384)
T 1vgv_A          209 LVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILT  288 (384)
T ss_dssp             EEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEE
T ss_pred             EEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEE
Confidence            8899999876 9999999999999888889999886 5443 44555554 2  68999999988999999999999999


Q ss_pred             cccCCCCCcHHHHHHHHcCCeEEecCC-CCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHh
Q 044542          364 PTLRPQGLDLTLIEAMHCGRTVLTPNY-PSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALS  442 (465)
Q Consensus       364 ps~~~eg~~~~~~EAma~G~PvI~s~~-gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~  442 (465)
                      ||      |.+++|||++|+|||+++. ++.. +++.++ +|+++++|+++++++|.++++| ++.+++|+++++++. +
T Consensus       289 ~S------g~~~lEA~a~G~PvI~~~~~~~~~-e~v~~g-~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~~~~~-~  358 (384)
T 1vgv_A          289 DS------GGIQEEAPSLGKPVLVMRDTTERP-EAVTAG-TVRLVGTDKQRIVEEVTRLLKD-ENEYQAMSRAHNPYG-D  358 (384)
T ss_dssp             SS------STGGGTGGGGTCCEEEESSCCSCH-HHHHHT-SEEEECSSHHHHHHHHHHHHHC-HHHHHHHHSSCCTTC-C
T ss_pred             CC------cchHHHHHHcCCCEEEccCCCCcc-hhhhCC-ceEEeCCCHHHHHHHHHHHHhC-hHHHhhhhhccCCCc-C
Confidence            98      2348999999999999986 7877 777776 9999977999999999999998 899999999988875 5


Q ss_pred             hCCHHHHHHHHHHHHHHhcC
Q 044542          443 MFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       443 ~fs~~~~~~~~~~~~~~~~~  462 (465)
                      .|+|+++++.+.++|+++.+
T Consensus       359 ~~~~~~i~~~~~~~~~~~~~  378 (384)
T 1vgv_A          359 GQACSRILEALKNNRISLGS  378 (384)
T ss_dssp             SCHHHHHHHHHHHTCCCC--
T ss_pred             CCHHHHHHHHHHHHHHhhcc
Confidence            59999999999998877654

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.97  E-value=4.2e-30  Score=253.61  Aligned_cols=300  Identities=15%  Similarity=0.092  Sum_probs=201.8

Q ss_pred             CCCCcEEEecCCc---hhHHhhh---cCCcEEEEecchhHHHH-h--h--hhhhhhhhcCCCCCCCchhhhhhhhHHHHH
Q 044542          153 DGAFDYVHTESVS---LPHWRAK---MVPNVAVTWHGIWYEVM-H--S--KLFGELFSNQNGVLPGSMTELQEAMPRLVD  221 (465)
Q Consensus       153 ~~~~DiI~~~~~~---~~~~~~~---~~p~~v~~~h~~~~~~~-~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (465)
                      ..+|||+|+|.|.   .+..++.   .++ .|+++|....--. .  .  +++..+. ..+   ......-.......-.
T Consensus       179 ~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~-tVfTiH~telGR~lagqg~~~~y~~L~-~~~---~d~ea~~~~i~~~~~~  253 (725)
T 3nb0_A          179 SQHAIVAHFHEWLAGVALPLCRKRRIDVV-TIFTTHATLLGRYLCASGSFDFYNCLE-SVD---VDHEAGRFGIYHRYCI  253 (725)
T ss_dssp             CSEEEEEEEESGGGCTHHHHHHHTTCSCE-EEEEESSCHHHHHHTSSSCSCHHHHGG-GCC---HHHHHHHTTCHHHHHH
T ss_pred             CCCCcEEEeCchhhhHHHHHHHHhCCCCC-EEEEEecchhhhhhhhcCCCchhhhhh-hcC---CChhhhhhchhHHHHH
Confidence            4679999999873   2233332   345 9999998642211 0  1  1111110 000   0000000011122333


Q ss_pred             HHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc-------cCccc--------ccccCCCCCC
Q 044542          222 EIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE-------AGVRF--------PEKLGVPANV  286 (465)
Q Consensus       222 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~-------~~~~~--------r~~~g~~~~~  286 (465)
                      ++.....||.|+++|+.+++.++..++.+.+.+  ||||+|.+.|.+...       .+..+        ...++++.++
T Consensus       254 EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk  331 (725)
T 3nb0_A          254 ERAAAHSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDN  331 (725)
T ss_dssp             HHHHHHHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGG
T ss_pred             HHHHHHhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCc
Confidence            456678999999999999999999888776655  999999999988521       11112        1233565556


Q ss_pred             cEEEEEeeccc-cccCHHHHHHHHHHhhhc-------CCCeEEEEEeCCcch----------------------------
Q 044542          287 SLVMGVAGRLV-RDKGHPLLYEAFSSITRD-------HPGVYLLVAGTGPWG----------------------------  330 (465)
Q Consensus       287 ~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~-------~~~~~l~ivG~g~~~----------------------------  330 (465)
                      .++++.+||+. .+||++.+++|+.+|...       ..-+.|+|+..+...                            
T Consensus       332 ~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~  411 (725)
T 3nb0_A          332 TLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGK  411 (725)
T ss_dssp             EEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhH
Confidence            57777789999 689999999999988743       123567777543100                            


Q ss_pred             -----------------------------------------------------------------hHHHHhc--CC----
Q 044542          331 -----------------------------------------------------------------RRYAELG--QN----  339 (465)
Q Consensus       331 -----------------------------------------------------------------~~~~~l~--~~----  339 (465)
                                                                                       +.+++++  ++    
T Consensus       412 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~dr  491 (725)
T 3nb0_A          412 RIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDR  491 (725)
T ss_dssp             HHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCS
T ss_pred             HHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCc
Confidence                                                                             0011122  22    


Q ss_pred             --eEEc-CCCChh------HHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeC-------Cc
Q 044542          340 --VKVL-GALEAH------QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNE-------EL  403 (465)
Q Consensus       340 --V~~~-g~v~~~------~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~-------~~  403 (465)
                        |+|+ ++++..      ++.++|+.||++|+||.+ ||||++++||||||+|||+|+.||.. +.+.++       .+
T Consensus       492 VKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~-EgfGl~~LEAmA~G~PvI~s~~gG~~-d~V~dg~~~~~~~~t  569 (725)
T 3nb0_A          492 VKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYY-EPWGYTPAECTVMGVPSITTNVSGFG-SYMEDLIETNQAKDY  569 (725)
T ss_dssp             EEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSS-BSSCHHHHHHHHTTCCEEEETTBHHH-HHHHTTSCHHHHHHT
T ss_pred             eeEEEeccccCCCCccchhHHHHHHhhceEEEecccc-CCCCHHHHHHHHcCCCEEEeCCCChh-hhhhccccccCCCCc
Confidence              4555 566655      589999999999999986 99999999999999999999999998 776664       46


Q ss_pred             eEEeC---C-CHHHHHHHH----HHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542          404 GYTFS---P-NVKSFVEAL----ELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       404 G~l~~---~-d~~~la~~i----~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      |+++.   + ++++++++|    ..++..+++.+.++++++++.++ .|+|++++++|+++|+.++.
T Consensus       570 G~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~-~FSWe~iA~~Yl~~Ye~aL~  635 (725)
T 3nb0_A          570 GIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD-LLDWKRMGLEYVKARQLALR  635 (725)
T ss_dssp             TEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG-GGBHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHh
Confidence            98883   3 555555544    44444447788899998887765 59999999999999998764

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.97  E-value=1.4e-29  Score=249.49  Aligned_cols=200  Identities=12%  Similarity=0.138  Sum_probs=165.0

Q ss_pred             CCCEEEecCCCCCCCccCCccc-----CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCC----eEE
Q 044542          251 QRNVHVILNGVDETKFVHDPEA-----GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYL  321 (465)
Q Consensus       251 ~~ki~vi~ngvd~~~~~~~~~~-----~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l  321 (465)
                      ..++.++|||||.+.|.+....     ...+|++++   ++ .+|+++||+.+.||++.+++|++++.+++|+    ++|
T Consensus       218 ~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~-~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~L  293 (482)
T 1uqt_A          218 AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NV-QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRY  293 (482)
T ss_dssp             EEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TC-EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEE
T ss_pred             EEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CC-EEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEE
Confidence            3579999999998887542111     235677775   33 6677999999999999999999999887764    789


Q ss_pred             EEEeCC-----cc----hhHHHHhc------------CCeE-EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHH
Q 044542          322 LVAGTG-----PW----GRRYAELG------------QNVK-VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAM  379 (465)
Q Consensus       322 ~ivG~g-----~~----~~~~~~l~------------~~V~-~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAm  379 (465)
                      +++|.+     +.    ++.++++.            ..|+ +.|.++.+++..+|+.||++++||.+ ||||++++|||
T Consensus       294 v~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~-EGfgLv~lEAm  372 (482)
T 1uqt_A          294 TQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYV  372 (482)
T ss_dssp             EEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHH
T ss_pred             EEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCc-ccCCchHHHHH
Confidence            999852     21    22333331            1366 47999999999999999999999986 99999999999


Q ss_pred             HcCC-----eEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542          380 HCGR-----TVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY  453 (465)
Q Consensus       380 a~G~-----PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  453 (465)
                      |||+     |||+|+.+|.. +.+   .+|+++++ |+++++++|.++++++++.++++++++++++++ |||+.+++++
T Consensus       373 A~g~~~~~gpvV~S~~~G~~-~~l---~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~~  447 (482)
T 1uqt_A          373 AAQDPANPGVLVLSQFAGAA-NEL---TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECF  447 (482)
T ss_dssp             HHSCTTSCCEEEEETTBGGG-GTC---TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred             HhCCCCCCCCEEEECCCCCH-HHh---CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence            9997     99999988887 444   27999999 999999999999997678889999999999977 8999999999


Q ss_pred             HHHHHHh
Q 044542          454 ERFFLRM  460 (465)
Q Consensus       454 ~~~~~~~  460 (465)
                      ++.|+++
T Consensus       448 l~~l~~~  454 (482)
T 1uqt_A          448 ISDLKQI  454 (482)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhc
Confidence            9999886

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.97  E-value=8.7e-30  Score=223.67  Aligned_cols=182  Identities=20%  Similarity=0.322  Sum_probs=159.2

Q ss_pred             ecCCCCCCCcc--CCcc----cCcccccccCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHhh--hcCCCeEEEEEeCC
Q 044542          257 ILNGVDETKFV--HDPE----AGVRFPEKLGVPANVSLVMGVAGRLV-RDKGHPLLYEAFSSIT--RDHPGVYLLVAGTG  327 (465)
Q Consensus       257 i~ngvd~~~~~--~~~~----~~~~~r~~~g~~~~~~~~l~~~Grl~-~~Kg~~~ll~a~~~l~--~~~~~~~l~ivG~g  327 (465)
                      ||||+|.+.|.  +...    .+..+|+++|++++  .+++++|++. +.||++.+++|+..+.  +++++++|+++|.+
T Consensus         2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~--~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~   79 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG   79 (200)
T ss_dssp             ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred             CCCccChhhccccccccchhhHHHHHHHHcCCCCC--CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC
Confidence            79999999998  6531    14568889998754  4777999999 9999999999999997  77789999999998


Q ss_pred             c--chhHHHHhc---CCeEE-cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeC
Q 044542          328 P--WGRRYAELG---QNVKV-LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNE  401 (465)
Q Consensus       328 ~--~~~~~~~l~---~~V~~-~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~  401 (465)
                      +  ..+.++++.   .+|++ +|+++++++..+|+.||++++||.. |++|++++|||++|+|||+++.++.. +++ ++
T Consensus        80 ~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~-e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~~-~~  156 (200)
T 2bfw_A           80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DII-TN  156 (200)
T ss_dssp             CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSC-CSSCHHHHHHHHTTCEEEEESCHHHH-HHC-CT
T ss_pred             ChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCC-CCccHHHHHHHHCCCCEEEeCCCChH-HHc-CC
Confidence            7  655555443   39999 9999999999999999999999986 99999999999999999999999998 787 89


Q ss_pred             CceEEeCC-CHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHhhCC
Q 044542          402 ELGYTFSP-NVKSFVEALELVIR-DGPKVLQRKGLACKEHALSMFT  445 (465)
Q Consensus       402 ~~G~l~~~-d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs  445 (465)
                      .+|+++++ |+++++++|.++++ + ++.++++++++++++++ ||
T Consensus       157 ~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~a~~~~~~-fs  200 (200)
T 2bfw_A          157 ETGILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMS-FS  200 (200)
T ss_dssp             TTCEEECTTCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH-TC
T ss_pred             CceEEecCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHh-cC
Confidence            99999998 99999999999999 8 99999999999999988 76

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.95  E-value=7.2e-28  Score=204.76  Aligned_cols=158  Identities=18%  Similarity=0.309  Sum_probs=133.7

Q ss_pred             cEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       287 ~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      +++|+++|++.+.||++.+++|+..+++ .++++|+++|+|+..+.++++    +.+|.+ |+++.+++.++|+.||+++
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v   79 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSKY-KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV   79 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCTT-GGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhcc-CCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence            4788999999999999999999999854 389999999999877666554    358888 9999999999999999999


Q ss_pred             ecccCCCCCcHHHHHHHHcCC-eEEe-cCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542          363 NPTLRPQGLDLTLIEAMHCGR-TVLT-PNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEH  439 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~-PvI~-s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~  439 (465)
                      +||.. |++|++++|||++|+ |||+ ++.++.. +++.++.+  ++++ |+++++++|.+++++ ++.+++++++++++
T Consensus        80 ~ps~~-e~~~~~~~Eama~G~vPvi~~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~  154 (166)
T 3qhp_A           80 HAANV-ESEAIACLEAISVGIVPVIANSPLSATR-QFALDERS--LFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKS  154 (166)
T ss_dssp             ECCCS-CCCCHHHHHHHHTTCCEEEECCTTCGGG-GGCSSGGG--EECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred             ECCcc-cCccHHHHHHHhcCCCcEEeeCCCCchh-hhccCCce--EEcCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence            99985 999999999999998 9999 5577776 77766544  7777 999999999999998 99999999999999


Q ss_pred             HHhhCCHHHHHHH
Q 044542          440 ALSMFTATKMASA  452 (465)
Q Consensus       440 ~~~~fs~~~~~~~  452 (465)
                      + ++|+|++++++
T Consensus       155 ~-~~~s~~~~~~~  166 (166)
T 3qhp_A          155 A-LNYTLENSVIQ  166 (166)
T ss_dssp             H-HHHC-------
T ss_pred             H-HHCChhhhhcC
Confidence            8 66999998764

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.95  E-value=3.4e-28  Score=235.11  Aligned_cols=331  Identities=15%  Similarity=0.065  Sum_probs=215.8

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCc-ccCCcce--EEEeec-CCCc------
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHND-VHQGNLH--VHFAAN-DHGS------  147 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~-~~~~~~~--v~~~~~-~~~~------  147 (465)
                      +|||++++...|   .. |   ....++++|.+. ||+|.+++.......... ....+..  +..... ....      
T Consensus         5 mmkIl~v~~~~~---~~-~---~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (376)
T 1v4v_A            5 MKRVVLAFGTRP---EA-T---KMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAA   77 (376)
T ss_dssp             CEEEEEEECSHH---HH-H---HHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHH
T ss_pred             ceEEEEEEeccH---HH-H---HHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHH
Confidence            489999997532   11 2   246789999988 899887765432110011 1111111  111110 0000      


Q ss_pred             ------cccCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542          148 ------VNLNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA  215 (465)
Q Consensus       148 ------~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (465)
                            ....++.+||+||+|+..   +.   .....++| ++...++...       +        ..   +.......
T Consensus        78 ~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~-------~--------~~---~~~~~~~~  138 (376)
T 1v4v_A           78 RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP-VGHVEAGLRS-------G--------NL---KEPFPEEA  138 (376)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC-EEEETCCCCC-------S--------CT---TSSTTHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCC-EEEEeCCCcc-------c--------cc---cCCCchHH
Confidence                  011157799999998642   11   11223677 6544333210       0        00   00000111


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG  294 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G  294 (465)
                      ..     ....+.+|.++++|+..++.+.+ +|++++++.+++|++ |...+...   +..++++++   +++++++++|
T Consensus       139 ~~-----~~~~~~~~~~~~~s~~~~~~l~~-~g~~~~ki~vi~n~~~d~~~~~~~---~~~~~~~~~---~~~~vl~~~g  206 (376)
T 1v4v_A          139 NR-----RLTDVLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDAVLLAAK---LGRLPEGLP---EGPYVTVTMH  206 (376)
T ss_dssp             HH-----HHHHHHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHHHHHHHH---HCCCCTTCC---SSCEEEECCC
T ss_pred             HH-----HHHHHHhceeeCCCHHHHHHHHH-cCCCcceEEEECCchHHHHhhhhh---hhHHHHhcC---CCCEEEEEeC
Confidence            11     12345689999999999999987 688888999999975 43222111   123444442   3347777899


Q ss_pred             ccccccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHHh---cCCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAEL---GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~l---~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      |+...||++.+++|++.+.+++|+++++++ |+++ ..+.++++   .++|+|+|+++..++..+|+.||++|.||   +
T Consensus       207 r~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S---~  283 (376)
T 1v4v_A          207 RRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS---G  283 (376)
T ss_dssp             CGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC---H
T ss_pred             cccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC---c
Confidence            998888999999999999887888998886 7665 45555554   26899999998889999999999999988   3


Q ss_pred             CCcHHHHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHH
Q 044542          370 GLDLTLIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATK  448 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  448 (465)
                        |+ ++|||++|+|||++ +.++.. +++. +++|++++.|+++|+++|.++++| ++.+++|++++     +.|.+..
T Consensus       284 --g~-~lEA~a~G~PvI~~~~~~~~~-~~~~-~g~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~-----~~~~~~~  352 (376)
T 1v4v_A          284 --GL-QEEGAALGVPVVVLRNVTERP-EGLK-AGILKLAGTDPEGVYRVVKGLLEN-PEELSRMRKAK-----NPYGDGK  352 (376)
T ss_dssp             --HH-HHHHHHTTCCEEECSSSCSCH-HHHH-HTSEEECCSCHHHHHHHHHHHHTC-HHHHHHHHHSC-----CSSCCSC
T ss_pred             --CH-HHHHHHcCCCEEeccCCCcch-hhhc-CCceEECCCCHHHHHHHHHHHHhC-hHhhhhhcccC-----CCCCCCh
Confidence              33 88999999999987 567776 6654 458999866999999999999998 88888888643     3355555


Q ss_pred             HHHHHHHHHHHhc
Q 044542          449 MASAYERFFLRMK  461 (465)
Q Consensus       449 ~~~~~~~~~~~~~  461 (465)
                      .++++.+.+.++.
T Consensus       353 ~~~~i~~~i~~~~  365 (376)
T 1v4v_A          353 AGLMVARGVAWRL  365 (376)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh
Confidence            6666666666554

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.95  E-value=1.5e-26  Score=224.80  Aligned_cols=276  Identities=13%  Similarity=0.101  Sum_probs=204.8

Q ss_pred             CCCcEEEecCCc---hhHHhhhcCCc--EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh-hhHHHHHHHHhhc
Q 044542          154 GAFDYVHTESVS---LPHWRAKMVPN--VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE-AMPRLVDEIRFFS  227 (465)
Q Consensus       154 ~~~DiI~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  227 (465)
                      ..-|+|.+|++.   ++..+....|+  +.+.+|-.++.   .+++..+               -. +-..++   ..+-
T Consensus       148 ~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs---~e~f~~L---------------p~~~r~ell---~gll  206 (496)
T 3t5t_A          148 SADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPS---ADYWRIL---------------PKEIRTGIL---HGML  206 (496)
T ss_dssp             CSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCC---HHHHTTS---------------CHHHHHHHH---HHHT
T ss_pred             CCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCC---HHHHhhC---------------cHhHHHHHH---HHHH
Confidence            357899999874   34455443332  88888864321   1122111               00 111111   4467


Q ss_pred             ccCEEEEeChhHHHHHHH----Hh-CCCC-------------CCEEEecCCCCCCCccCCcc-cCcccccccCCCCCCcE
Q 044542          228 SYNQHICISNSAAEVLVK----IY-QLPQ-------------RNVHVILNGVDETKFVHDPE-AGVRFPEKLGVPANVSL  288 (465)
Q Consensus       228 ~~d~ii~~S~~~~~~~~~----~~-~~~~-------------~ki~vi~ngvd~~~~~~~~~-~~~~~r~~~g~~~~~~~  288 (465)
                      .+|.|.+.+....+.+.+    .+ |.+.             .++.++|+|||.+.|.+... ....+|++++   ++ .
T Consensus       207 ~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~-~  282 (496)
T 3t5t_A          207 PATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GH-R  282 (496)
T ss_dssp             TSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TS-E
T ss_pred             hCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---Cc-e
Confidence            899999999887776554    23 3221             36789999999999876532 2356777776   34 5


Q ss_pred             EEEEeeccccccCHHHHHHHHHHhhhcCCC---eEEEEEeC-----Ccc----hhHHHHhc---------CCeEEcCCCC
Q 044542          289 VMGVAGRLVRDKGHPLLYEAFSSITRDHPG---VYLLVAGT-----GPW----GRRYAELG---------QNVKVLGALE  347 (465)
Q Consensus       289 ~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~---~~l~ivG~-----g~~----~~~~~~l~---------~~V~~~g~v~  347 (465)
                      +|+++||+.+.||++.+++|+ ++.+++|+   +.|+++|.     ++.    ++.++++.         ..|+|+|.++
T Consensus       283 lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~  361 (496)
T 3t5t_A          283 LVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDND  361 (496)
T ss_dssp             EEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred             EEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCC
Confidence            666999999999999999999 88888775   56888863     222    22333331         1699999999


Q ss_pred             hhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcC---CeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHh
Q 044542          348 AHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG---RTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIR  423 (465)
Q Consensus       348 ~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G---~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~  423 (465)
                      .+++..+|+.||++++||.+ ||||++.+||||||   .|+|+|+.+|.. +.+  +++|++++| |+++++++|.+++.
T Consensus       362 ~~el~aly~~ADv~vv~Slr-EGfgLv~~EamA~~~~~g~lVlSe~aGa~-~~l--~~~allVnP~D~~~lA~AI~~aL~  437 (496)
T 3t5t_A          362 VNHTIACFRRADLLIFNSTV-DGQNLSTFEAPLVNERDADVILSETCGAA-EVL--GEYCRSVNPFDLVEQAEAISAALA  437 (496)
T ss_dssp             HHHHHHHHHHCSEEEECCSS-BSCCSHHHHHHHHCSSCCEEEEETTBTTH-HHH--GGGSEEECTTBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccEEEECccc-ccCChhHHHHHHhCCCCCCEEEeCCCCCH-HHh--CCCEEEECCCCHHHHHHHHHHHHc
Confidence            99999999999999999987 99999999999997   899999999988 444  347999999 99999999999999


Q ss_pred             CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          424 DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      ++++.++++.++.++++.+ ++.+..++.+++-++..
T Consensus       438 m~~~er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~  473 (496)
T 3t5t_A          438 AGPRQRAEAAARRRDAARP-WTLEAWVQAQLDGLAAD  473 (496)
T ss_dssp             CCHHHHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhc
Confidence            9778889999999999977 89999999999888754

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.94  E-value=1.1e-26  Score=223.53  Aligned_cols=299  Identities=12%  Similarity=0.043  Sum_probs=201.3

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC-CCcccCCcce-EEEeecCC--CccccCCCCCC
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP-HNDVHQGNLH-VHFAANDH--GSVNLNNDGAF  156 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~  156 (465)
                      +|.+-+.+       .|..+.+..|+++|.++| +|.+.+....... .......... .. .+...  ...++.++.+|
T Consensus        42 ~iwih~~s-------~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~~~v~~~~~-~p~~~~~~l~~~l~~~~p  112 (374)
T 2xci_A           42 ALWVHTAS-------IGEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKSDFYDCLHP-LPLDNPFSVKRFEELSKP  112 (374)
T ss_dssp             CEEEECSS-------HHHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTGGGCSEEEE-CCCSSHHHHHHHHHHHCC
T ss_pred             CEEEEcCC-------HHHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhcccccceeE-CCCCCHHHHHHHHHHhCC
Confidence            56665533       577888999999999998 8876665432211 0111111110 11 11110  01112266789


Q ss_pred             cEEEecCCc-hhHHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEE
Q 044542          157 DYVHTESVS-LPHWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHI  233 (465)
Q Consensus       157 DiI~~~~~~-~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii  233 (465)
                      |+||++... ++..+  ... | ++...+...                 .      +.    +     .+..++++|.++
T Consensus       113 Div~~~~~~~~~~~~~~~~~-p-~~~~~~~~~-----------------~------~~----~-----~~~~~~~~d~ii  158 (374)
T 2xci_A          113 KALIVVEREFWPSLIIFTKV-P-KILVNAYAK-----------------G------SL----I-----EKILSKKFDLII  158 (374)
T ss_dssp             SEEEEESCCCCHHHHHHCCS-C-EEEEEECCC-----------------C------CH----H-----HHHHHTTCSEEE
T ss_pred             CEEEEECccCcHHHHHHHhC-C-EEEEEeecC-----------------c------hH----H-----HHHHHHhCCEEE
Confidence            999976432 22222  122 5 544332210                 0      01    1     125578899999


Q ss_pred             EeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhh
Q 044542          234 CISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSIT  313 (465)
Q Consensus       234 ~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~  313 (465)
                      ++|+..++.+.+ +|++  ++.+++|+.    |......    ++.  +  .. .++++.|+  ..||++.+++|++.+.
T Consensus       159 ~~S~~~~~~l~~-~g~~--ki~vi~n~~----f~~~~~~----~~~--l--~~-~vi~~~~~--~~k~~~~ll~A~~~l~  220 (374)
T 2xci_A          159 MRTQEDVEKFKT-FGAK--RVFSCGNLK----FICQKGK----GIK--L--KG-EFIVAGSI--HTGEVEIILKAFKEIK  220 (374)
T ss_dssp             ESCHHHHHHHHT-TTCC--SEEECCCGG----GCCCCCS----CCC--C--SS-CEEEEEEE--CGGGHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHHH-cCCC--eEEEcCCCc----cCCCcCh----hhh--h--cC-CEEEEEeC--CCchHHHHHHHHHHHH
Confidence            999999999988 5876  999999973    2221111    111  1  11 34445554  4689999999999999


Q ss_pred             hcCCCeEEEEEeCCcch-hHHHHh----c----------CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHH
Q 044542          314 RDHPGVYLLVAGTGPWG-RRYAEL----G----------QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA  378 (465)
Q Consensus       314 ~~~~~~~l~ivG~g~~~-~~~~~l----~----------~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EA  378 (465)
                      +++|+++|+|+|+|+.+ +.++++    +          .+|.+.|..  +|+..+|+.||++++||...|++|++++||
T Consensus       221 ~~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEA  298 (374)
T 2xci_A          221 KTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEP  298 (374)
T ss_dssp             TTCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHH
T ss_pred             hhCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHH
Confidence            88899999999998865 344432    2          257788876  799999999999888765547789999999


Q ss_pred             HHcCCeEEec-CCCCcceeeeeeC-CceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCC
Q 044542          379 MHCGRTVLTP-NYPSIVRTVVVNE-ELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT  445 (465)
Q Consensus       379 ma~G~PvI~s-~~gg~~~e~v~~~-~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  445 (465)
                      |+||+|||++ +.++.+ +++.+. .+|.++.+ |+++|+++|.++++|  +.+++|+++++++++++++
T Consensus       299 mA~G~PVI~~~~~~~~~-e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg~~ar~~~~~~~g  365 (374)
T 2xci_A          299 TCWGIPVIYGPYTHKVN-DLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVEEKSREIKGCYLE  365 (374)
T ss_dssp             HTTTCCEEECSCCTTSH-HHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCEEECCCccChH-HHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHhccc
Confidence            9999999975 778887 666542 46788887 999999999999996  6788999999999988643

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.92  E-value=2.7e-25  Score=190.78  Aligned_cols=140  Identities=24%  Similarity=0.339  Sum_probs=122.3

Q ss_pred             cCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh--------cCCeEEcCCCChhHH
Q 044542          280 LGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL--------GQNVKVLGALEAHQL  351 (465)
Q Consensus       280 ~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l--------~~~V~~~g~v~~~~~  351 (465)
                      +.++.++ .+++|+|++.+.||++.+++|++.+    ++++|+++|.++..+.++++        .++|.|+|+++++++
T Consensus        17 ~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~   91 (177)
T 2f9f_A           17 FKFKCYG-DFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEEL   91 (177)
T ss_dssp             CCCCCCC-SCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHH
T ss_pred             cccCCCC-CEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHH
Confidence            3345555 5667999999999999999999998    68899999998765433322        269999999999999


Q ss_pred             HHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHH
Q 044542          352 SEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKV  428 (465)
Q Consensus       352 ~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~  428 (465)
                      ..+|+.||++++||.. |++|++++|||++|+|||+++.++.. +++.++.+|+++ + |+++++++|.+++++ ++.
T Consensus        92 ~~~~~~adi~v~ps~~-e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~-~~d~~~l~~~i~~l~~~-~~~  165 (177)
T 2f9f_A           92 IDLYSRCKGLLCTAKD-EDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLV-NADVNEIIDAMKKVSKN-PDK  165 (177)
T ss_dssp             HHHHHHCSEEEECCSS-CCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEE-CSCHHHHHHHHHHHHHC-TTT
T ss_pred             HHHHHhCCEEEeCCCc-CCCChHHHHHHHcCCcEEEeCCCCHH-HHhcCCCccEEe-CCCHHHHHHHHHHHHhC-HHH
Confidence            9999999999999975 99999999999999999999999988 888899999999 6 999999999999998 543

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.92  E-value=2.6e-23  Score=195.39  Aligned_cols=301  Identities=9%  Similarity=-0.027  Sum_probs=198.4

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-CcccCCcceEEEeecCCCccccCCCCCCc
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH-NDVHQGNLHVHFAANDHGSVNLNNDGAFD  157 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~D  157 (465)
                      -|++-+... |-. ....++...-....+.+.+.|++-.-+......... .....      ...   +  ....-.++|
T Consensus        10 ~m~~~i~~~-~~~-~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~~~~~~~~~~------~~~---~--~~~~~~~~D   76 (339)
T 3rhz_A           10 CMRVYITNI-NGQ-SIQSTAQLCQNTVTDVAVSLGYRELGIYCYQIHTDSESELSK------RLD---G--IVAGLRHGD   76 (339)
T ss_dssp             CCCEEEEEE-ESS-CTTCHHHHHHHHHHHHHHHTTCEEEEEECCCGGGSCHHHHHH------HHH---H--HTTTCCTTC
T ss_pred             hhheeeecc-cCc-cccchHHHHHHHHHHHHHHCCCeEEEeeccccccccHHHHHH------HHH---H--HHhcCCCCC
Confidence            466554443 321 234455666667777777889976555433211111 11000      000   0  011356799


Q ss_pred             EEEecCCch---------hHHhh-hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhc
Q 044542          158 YVHTESVSL---------PHWRA-KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFS  227 (465)
Q Consensus       158 iI~~~~~~~---------~~~~~-~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (465)
                      +|+++++.+         ..++. .+.| ++..+||+++.....                  ...   .  ...|+..++
T Consensus        77 vIi~q~P~~~~~~~~~~~~~~lk~~~~k-~i~~ihDl~pl~~~~------------------~~~---~--~~~E~~~y~  132 (339)
T 3rhz_A           77 VVIFQTPTWNTTEFDEKLMNKLKLYDIK-IVLFIHDVVPLMFSG------------------NFY---L--MDRTIAYYN  132 (339)
T ss_dssp             EEEEEECCSSCHHHHHHHHHHHTTSSCE-EEEEESCCHHHHCGG------------------GGG---G--HHHHHHHHT
T ss_pred             EEEEeCCCcchhhHHHHHHHHHHhcCCE-EEEEecccHHhhCcc------------------chh---h--HHHHHHHHH
Confidence            999987642         11111 1455 999999997653210                  010   1  113568899


Q ss_pred             ccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHH
Q 044542          228 SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYE  307 (465)
Q Consensus       228 ~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~  307 (465)
                      ++|.|+++|+.+++.+.+ .|++..++.++++. |..  .+.+     .    ..+ ..+.+++|+|++.....++    
T Consensus       133 ~aD~Ii~~S~~~~~~l~~-~G~~~~ki~~~~~~-~~~--~~~~-----~----~~~-~~~~~i~yaG~l~k~~~L~----  194 (339)
T 3rhz_A          133 KADVVVAPSQKMIDKLRD-FGMNVSKTVVQGMW-DHP--TQAP-----M----FPA-GLKREIHFPGNPERFSFVK----  194 (339)
T ss_dssp             TCSEEEESCHHHHHHHHH-TTCCCSEEEECCSC-CCC--CCCC-----C----CCC-EEEEEEEECSCTTTCGGGG----
T ss_pred             HCCEEEECCHHHHHHHHH-cCCCcCceeecCCC-Ccc--Cccc-----c----ccc-CCCcEEEEeCCcchhhHHH----
Confidence            999999999999999988 68877777655442 211  0100     0    011 2237788999998532221    


Q ss_pred             HHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccC------CCCCcHHHHHHHHc
Q 044542          308 AFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR------PQGLDLTLIEAMHC  381 (465)
Q Consensus       308 a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~------~eg~~~~~~EAma~  381 (465)
                         .+   .++++|+|+|+|+.+    ++. +|+|+|++|.+++..+++.+|+.++....      ..++|.+++||||+
T Consensus       195 ---~l---~~~~~f~ivG~G~~~----~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~  263 (339)
T 3rhz_A          195 ---EW---KYDIPLKVYTWQNVE----LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAA  263 (339)
T ss_dssp             ---GC---CCSSCEEEEESCCCC----CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHH
T ss_pred             ---hC---CCCCeEEEEeCCccc----CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHc
Confidence               22   378999999999875    344 99999999999999999999998885110      13579999999999


Q ss_pred             CCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          382 GRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       382 G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      |+|||+++.++.. +++.++++|++++ +.++++++|..+  . ++.+++|++++++..++ +++....+
T Consensus       264 G~PVI~~~~~~~~-~~v~~~~~G~~~~-~~~e~~~~i~~l--~-~~~~~~m~~na~~~a~~-~~~~~f~k  327 (339)
T 3rhz_A          264 GIPVIVQEGIANQ-ELIENNGLGWIVK-DVEEAIMKVKNV--N-EDEYIELVKNVRSFNPI-LRKGFFTR  327 (339)
T ss_dssp             TCCEEEETTCTTT-HHHHHHTCEEEES-SHHHHHHHHHHC--C-HHHHHHHHHHHHHHTHH-HHTTHHHH
T ss_pred             CCCEEEccChhHH-HHHHhCCeEEEeC-CHHHHHHHHHHh--C-HHHHHHHHHHHHHHHHH-hhccHHHH
Confidence            9999999999998 8999999999998 788999988876  2 56789999999887554 44444433

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.91  E-value=2.6e-24  Score=208.26  Aligned_cols=335  Identities=15%  Similarity=0.150  Sum_probs=215.7

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCC---cccCCcceEEEeecCCC--c---
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHN---DVHQGNLHVHFAANDHG--S---  147 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~---~~~~~~~~v~~~~~~~~--~---  147 (465)
                      +++|||++|+..-      .|. ..+..++++|.+. |+++.++..........   +.....+.........+  .   
T Consensus        23 ~~m~ki~~v~Gtr------~~~-~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~   95 (396)
T 3dzc_A           23 NAMKKVLIVFGTR------PEA-IKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGV   95 (396)
T ss_dssp             -CCEEEEEEECSH------HHH-HHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHH
T ss_pred             CCCCeEEEEEecc------HhH-HHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHH
Confidence            4458999999753      233 3457799999987 78987666654321000   10111111221111010  1   


Q ss_pred             --------cccCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhh
Q 044542          148 --------VNLNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ  213 (465)
Q Consensus       148 --------~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (465)
                              ....++.+||+|++++..   ++   .....++| ++...++....               ....    .+.
T Consensus        96 ~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IP-v~h~~ag~rs~---------------~~~~----~~~  155 (396)
T 3dzc_A           96 TSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIP-VGHVEAGLRTG---------------NIYS----PWP  155 (396)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCC-EEEETCCCCCS---------------CTTS----STT
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCcccc---------------cccc----CCc
Confidence                    011167899999998642   22   22234678 65544432100               0000    010


Q ss_pred             hhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcc-c----CcccccccC-CCCCC
Q 044542          214 EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPE-A----GVRFPEKLG-VPANV  286 (465)
Q Consensus       214 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~-~----~~~~r~~~g-~~~~~  286 (465)
                      ....+.    ...+.+|.+++.|+..++.+.+ .|++++++.+++|++ |...+.+... .    +..+++++| ++.++
T Consensus       156 ~~~~r~----~~~~~a~~~~~~se~~~~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~  230 (396)
T 3dzc_A          156 EEGNRK----LTAALTQYHFAPTDTSRANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASK  230 (396)
T ss_dssp             HHHHHH----HHHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTS
T ss_pred             HHHHHH----HHHHhcCEEECCCHHHHHHHHH-cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCC
Confidence            111111    1235689999999999999988 799989999999964 4322221110 0    246778888 46566


Q ss_pred             cEEEEEeecccc-ccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHHh-c--CCeEEcCCCChhHHHHHHHhcCe
Q 044542          287 SLVMGVAGRLVR-DKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAEL-G--QNVKVLGALEAHQLSEFYNALDV  360 (465)
Q Consensus       287 ~~~l~~~Grl~~-~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~l-~--~~V~~~g~v~~~~~~~~~~~aDv  360 (465)
                      ++++++.+|... .|+++.+++|+..+.+++|++++++. |.++ .++.++++ .  ++|.+++++++.++..+|+.||+
T Consensus       231 ~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~  310 (396)
T 3dzc_A          231 KLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI  310 (396)
T ss_dssp             EEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred             CEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE
Confidence            677766666543 57899999999999888889998885 6543 34555553 2  78999999988899999999999


Q ss_pred             EEecccCCCCCcHHHHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542          361 FVNPTLRPQGLDLTLIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEH  439 (465)
Q Consensus       361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~  439 (465)
                      +|.+|    | |+ ..|||++|+|+|++ +.++.. +++.++ .++++..|++++++++.+++++ ++.+++|++++.. 
T Consensus       311 vv~~S----G-g~-~~EA~a~G~PvV~~~~~~~~~-e~v~~G-~~~lv~~d~~~l~~ai~~ll~d-~~~~~~m~~~~~~-  380 (396)
T 3dzc_A          311 ILTDS----G-GI-QEEAPSLGKPVLVMRETTERP-EAVAAG-TVKLVGTNQQQICDALSLLLTD-PQAYQAMSQAHNP-  380 (396)
T ss_dssp             EEESC----S-GG-GTTGGGGTCCEEECCSSCSCH-HHHHHT-SEEECTTCHHHHHHHHHHHHHC-HHHHHHHHTSCCT-
T ss_pred             EEECC----c-cH-HHHHHHcCCCEEEccCCCcch-HHHHcC-ceEEcCCCHHHHHHHHHHHHcC-HHHHHHHhhccCC-
Confidence            99887    2 33 48999999999998 677766 676666 5777766899999999999999 8888888876543 


Q ss_pred             HHhhCCHHHHHHHHHHHH
Q 044542          440 ALSMFTATKMASAYERFF  457 (465)
Q Consensus       440 ~~~~fs~~~~~~~~~~~~  457 (465)
                          |.....++++.+++
T Consensus       381 ----~~~~~aa~ri~~~l  394 (396)
T 3dzc_A          381 ----YGDGKACQRIADIL  394 (396)
T ss_dssp             ----TCCSCHHHHHHHHH
T ss_pred             ----CcCChHHHHHHHHH
Confidence                33344444444443

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.91  E-value=1.7e-23  Score=202.80  Aligned_cols=336  Identities=14%  Similarity=0.083  Sum_probs=214.1

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCc-ccCC--cceEEEeecCC--Ccc-
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHND-VHQG--NLHVHFAANDH--GSV-  148 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~~~--~~~v~~~~~~~--~~~-  148 (465)
                      |++|||++|+..-      .+.. .+..++++|.+.  |+++.++.+........+ +...  .+.....-...  ... 
T Consensus        25 m~~~kI~~v~Gtr------~~~~-~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~~~~~~   97 (403)
T 3ot5_A           25 MAKIKVMSIFGTR------PEAI-KMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAE   97 (403)
T ss_dssp             -CCEEEEEEECSH------HHHH-HHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHH
T ss_pred             cccceEEEEEecC------hhHH-HHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCCCCHHH
Confidence            5568999999753      2333 357899999987  689887766543211111 1101  11111111000  000 


Q ss_pred             ----------ccCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhh
Q 044542          149 ----------NLNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTEL  212 (465)
Q Consensus       149 ----------~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (465)
                                ...++.+||+|++++..   ++   .....++| ++....+....              . .   +....
T Consensus        98 ~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IP-v~h~~aglrs~--------------~-~---~~~~p  158 (403)
T 3ot5_A           98 ITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKM-LGHVEAGLRTW--------------N-K---YSPFP  158 (403)
T ss_dssp             HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE-EEEESCCCCCS--------------C-T---TSSTT
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCcccc--------------c-c---ccCCc
Confidence                      11167899999998642   21   22234667 55433331000              0 0   00000


Q ss_pred             hhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCC-CCCCCccCCcccCcccccccCCCCCCcEEEE
Q 044542          213 QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVSLVMG  291 (465)
Q Consensus       213 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~  291 (465)
                      .....+     ..-+.+|.+++.++..++.+.+ .|++++++.+++|+ +|...+..........++++   .+++++++
T Consensus       159 ~~~~r~-----~~~~~a~~~~~~se~~~~~l~~-~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv  229 (403)
T 3ot5_A          159 EEMNRQ-----LTGVMADIHFSPTKQAKENLLA-EGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILM  229 (403)
T ss_dssp             HHHHHH-----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEE
T ss_pred             HHHHHH-----HHHHhcCEEECCCHHHHHHHHH-cCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEE
Confidence            111111     1224578999999999999988 69998999999985 45433322221122344444   34457777


Q ss_pred             Eeecccc-ccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHH-hc--CCeEEcCCCChhHHHHHHHhcCeEEecc
Q 044542          292 VAGRLVR-DKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAE-LG--QNVKVLGALEAHQLSEFYNALDVFVNPT  365 (465)
Q Consensus       292 ~~Grl~~-~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~-l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps  365 (465)
                      +.||... .|+++.+++|+..+.+++|++++++. |.++ .++.+++ +.  ++|.++|++++.++..+|+.||++|.+|
T Consensus       230 ~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S  309 (403)
T 3ot5_A          230 TAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS  309 (403)
T ss_dssp             CCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC
T ss_pred             EeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence            7777644 47889999999999888899998887 5443 3445554 33  7899999999899999999999999876


Q ss_pred             cCCCCCcHHHHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhC
Q 044542          366 LRPQGLDLTLIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMF  444 (465)
Q Consensus       366 ~~~eg~~~~~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~f  444 (465)
                            |...+||+++|+|+|++ +.++.. +.+..+ +|+++..|++++++++.+++++ ++.+++|++++..+.. ..
T Consensus       310 ------Gg~~~EA~a~g~PvV~~~~~~~~~-e~v~~g-~~~lv~~d~~~l~~ai~~ll~~-~~~~~~m~~~~~~~g~-~~  379 (403)
T 3ot5_A          310 ------GGVQEEAPGMGVPVLVLRDTTERP-EGIEAG-TLKLIGTNKENLIKEALDLLDN-KESHDKMAQAANPYGD-GF  379 (403)
T ss_dssp             ------HHHHHHGGGTTCCEEECCSSCSCH-HHHHHT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHHHSCCTTCC-SC
T ss_pred             ------ccHHHHHHHhCCCEEEecCCCcch-hheeCC-cEEEcCCCHHHHHHHHHHHHcC-HHHHHHHHhhcCcccC-Cc
Confidence                  23448999999999998 667765 666444 8888877999999999999998 8888888876655433 24


Q ss_pred             CHHHHHHHHHHHH
Q 044542          445 TATKMASAYERFF  457 (465)
Q Consensus       445 s~~~~~~~~~~~~  457 (465)
                      +.+++++.+.+.+
T Consensus       380 aa~rI~~~l~~~l  392 (403)
T 3ot5_A          380 AANRILAAIKSHF  392 (403)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            6666666666554

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.89  E-value=9e-23  Score=199.55  Aligned_cols=330  Identities=14%  Similarity=0.022  Sum_probs=213.4

Q ss_pred             CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeec------------
Q 044542           76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAN------------  143 (465)
Q Consensus        76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~------------  143 (465)
                      +..+|||++++..      .+|....+..++++|.++||+|++++....   .......+..+.....            
T Consensus        17 ~~~~MrIl~~~~~------~~Gh~~~~~~la~~L~~~GheV~v~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~   87 (412)
T 3otg_A           17 EGRHMRVLFASLG------THGHTYPLLPLATAARAAGHEVTFATGEGF---AGTLRKLGFEPVATGMPVFDGFLAALRI   87 (412)
T ss_dssp             -CCSCEEEEECCS------SHHHHGGGHHHHHHHHHTTCEEEEEECGGG---HHHHHHTTCEEEECCCCHHHHHHHHHHH
T ss_pred             ccceeEEEEEcCC------CcccHHHHHHHHHHHHHCCCEEEEEccHHH---HHHHHhcCCceeecCcccccchhhhhhh
Confidence            4557999999843      367777788999999999999999997631   1112222222322221            


Q ss_pred             ---------------CC-------C---------ccccCCCCCCcEEEecCCchhHH---hhhcCCcEEEEecchhHHHH
Q 044542          144 ---------------DH-------G---------SVNLNNDGAFDYVHTESVSLPHW---RAKMVPNVAVTWHGIWYEVM  189 (465)
Q Consensus       144 ---------------~~-------~---------~~~~~~~~~~DiI~~~~~~~~~~---~~~~~p~~v~~~h~~~~~~~  189 (465)
                                     ..       .         .....++.+||+|+++...+...   ...++| ++.+.|+..... 
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP-~v~~~~~~~~~~-  165 (412)
T 3otg_A           88 RFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIP-TICHGVGRDTPD-  165 (412)
T ss_dssp             HHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCC-EEEECCSCCCCS-
T ss_pred             hhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCC-EEEecccccCch-
Confidence                           00       0         00011566899999986543322   234678 888888743110 


Q ss_pred             hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH-------HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCC
Q 044542          190 HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI-------RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVD  262 (465)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd  262 (465)
                                       .....+...+.+.....       ..+..+|.+++.++...+...+....  ....+.+.+.+
T Consensus       166 -----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~  226 (412)
T 3otg_A          166 -----------------DLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARP--RRHELRPVPFA  226 (412)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCT--TEEECCCCCCC
T ss_pred             -----------------hhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCC--CcceeeccCCC
Confidence                             00011111222221110       01246788888887776666543322  11111111111


Q ss_pred             CCCccCCcccCccccccc--CCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeC-CcchhHHHHhcCC
Q 044542          263 ETKFVHDPEAGVRFPEKL--GVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGT-GPWGRRYAELGQN  339 (465)
Q Consensus       263 ~~~~~~~~~~~~~~r~~~--g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~-g~~~~~~~~l~~~  339 (465)
                           .     ...+..+  ..+.++++++++.|++. .++.+.+.++++.+.+.  +.++++++. +...+.++++.++
T Consensus       227 -----~-----~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~~~l~~~~~~  293 (412)
T 3otg_A          227 -----E-----QGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDVSGLGEVPAN  293 (412)
T ss_dssp             -----C-----CCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCCTTCCCCCTT
T ss_pred             -----C-----CCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCChhhhccCCCc
Confidence                 0     0111222  22345568888899986 77787777777777653  456666554 4335555566689


Q ss_pred             eEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHH
Q 044542          340 VKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVK  412 (465)
Q Consensus       340 V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~  412 (465)
                      |.+.|++   ++.++|+.||++|.++     .+.+++|||++|+|+|+.+.++    .. +.+.+.+.|+++++   |++
T Consensus       294 v~~~~~~---~~~~~l~~ad~~v~~~-----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~-~~v~~~g~g~~~~~~~~~~~  364 (412)
T 3otg_A          294 VRLESWV---PQAALLPHVDLVVHHG-----GSGTTLGALGAGVPQLSFPWAGDSFANA-QAVAQAGAGDHLLPDNISPD  364 (412)
T ss_dssp             EEEESCC---CHHHHGGGCSEEEESC-----CHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECCGGGCCHH
T ss_pred             EEEeCCC---CHHHHHhcCcEEEECC-----chHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHH
Confidence            9999998   4889999999999754     2479999999999999977654    44 56777889999986   899


Q ss_pred             HHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          413 SFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       413 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      +|+++|.++++| ++.++++++.+++.... ++++++++.+++++.+
T Consensus       365 ~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~  409 (412)
T 3otg_A          365 SVSGAAKRLLAE-ESYRAGARAVAAEIAAM-PGPDEVVRLLPGFASR  409 (412)
T ss_dssp             HHHHHHHHHHHC-HHHHHHHHHHHHHHHHS-CCHHHHHTTHHHHHC-
T ss_pred             HHHHHHHHHHhC-HHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHhcc
Confidence            999999999999 89999999999888776 7999999999998754

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.86  E-value=3.2e-20  Score=177.76  Aligned_cols=316  Identities=16%  Similarity=0.150  Sum_probs=197.7

Q ss_pred             eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC----CCccc-------
Q 044542           81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND----HGSVN-------  149 (465)
Q Consensus        81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~-------  149 (465)
                      ||++.+.      ..||.-.-...++++|.++||+|++++....-. ...+...+..++..+..    ...+.       
T Consensus         4 ~i~i~~G------GTgGHi~palala~~L~~~g~~V~~vg~~~g~e-~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~   76 (365)
T 3s2u_A            4 NVLIMAG------GTGGHVFPALACAREFQARGYAVHWLGTPRGIE-NDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLE   76 (365)
T ss_dssp             EEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTH-HHHTGGGTCCEEECC--------------CHHH
T ss_pred             cEEEEcC------CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHh-hchhhhcCCcEEEEECCCcCCCCHHHHHHHHHH
Confidence            7887653      456766668899999999999999998654211 00111122222222211    01111       


Q ss_pred             ----------cCCCCCCcEEEecCCc--hhH---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542          150 ----------LNNDGAFDYVHTESVS--LPH---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE  214 (465)
Q Consensus       150 ----------~~~~~~~DiI~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (465)
                                ..++.+||+|+.+...  .+.   ....++| ++..-.+..                           .+
T Consensus        77 ~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP-~vihe~n~~---------------------------~G  128 (365)
T 3s2u_A           77 LLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVP-LVIHEQNAV---------------------------AG  128 (365)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCC-EEEEECSSS---------------------------CC
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCC-EEEEecchh---------------------------hh
Confidence                      1167899999988542  222   2234677 554322210                           01


Q ss_pred             hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542          215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG  294 (465)
Q Consensus       215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G  294 (465)
                      ...+     .+.+.++.+....+..       + ....++.++.|++..+.+...       +.+.+++.+.+.++++.|
T Consensus       129 ~~nr-----~l~~~a~~v~~~~~~~-------~-~~~~k~~~~g~pvr~~~~~~~-------~~~~~~~~~~~~ilv~gG  188 (365)
T 3s2u_A          129 TANR-----SLAPIARRVCEAFPDT-------F-PASDKRLTTGNPVRGELFLDA-------HARAPLTGRRVNLLVLGG  188 (365)
T ss_dssp             HHHH-----HHGGGCSEEEESSTTS-------S-CC---CEECCCCCCGGGCCCT-------TSSCCCTTSCCEEEECCT
T ss_pred             hHHH-----hhccccceeeeccccc-------c-cCcCcEEEECCCCchhhccch-------hhhcccCCCCcEEEEECC
Confidence            1111     2235567766554432       1 234677888888876554322       233445556656777778


Q ss_pred             ccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch---hHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCC
Q 044542          295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG---RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL  371 (465)
Q Consensus       295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~---~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~  371 (465)
                      +....+..+.+.++++.+..+.....++++|.+..+   +.++++..++.+.|++  +++.++|+.||++|.   + .| 
T Consensus       189 s~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~--~dm~~~l~~aDlvI~---r-aG-  261 (365)
T 3s2u_A          189 SLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFI--SDMAAAYAWADLVIC---R-AG-  261 (365)
T ss_dssp             TTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCC--SCHHHHHHHCSEEEE---C-CC-
T ss_pred             cCCccccchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccch--hhhhhhhccceEEEe---c-CC-
Confidence            888888788888999888655332334556665433   2344455789999999  689999999999995   2 23 


Q ss_pred             cHHHHHHHHcCCeEEecCCCCcce-------eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044542          372 DLTLIEAMHCGRTVLTPNYPSIVR-------TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEHAL  441 (465)
Q Consensus       372 ~~~~~EAma~G~PvI~s~~gg~~~-------e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~  441 (465)
                      ++++.|+|++|+|+|..+.+...+       +.+.+.+.|++++.   +++.|+++|.++++| ++.+++|++++++...
T Consensus       262 ~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d-~~~~~~m~~~a~~~~~  340 (365)
T 3s2u_A          262 ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMH-PETLRSMADQARSLAK  340 (365)
T ss_dssp             HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-THHHHHHHHHHHHTCC
T ss_pred             cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCC-HHHHHHHHHHHHhcCC
Confidence            689999999999999887654321       23556667888875   689999999999999 8999999999998776


Q ss_pred             hhCCHHHHHHHHHHHHHHh
Q 044542          442 SMFTATKMASAYERFFLRM  460 (465)
Q Consensus       442 ~~fs~~~~~~~~~~~~~~~  460 (465)
                      . ...+++++.++++.+.+
T Consensus       341 ~-~aa~~ia~~i~~larG~  358 (365)
T 3s2u_A          341 P-EATRTVVDACLEVARGL  358 (365)
T ss_dssp             T-THHHHHHHHHHHHC---
T ss_pred             c-cHHHHHHHHHHHHHccc
Confidence            5 47777777777766543

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.85  E-value=5.3e-20  Score=180.87  Aligned_cols=341  Identities=16%  Similarity=0.122  Sum_probs=200.5

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC-C-C---------
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND-H-G---------  146 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~---------  146 (465)
                      .+|||++++.      ..+|....+..++++|.++||+|++++......   .....+..+...... . .         
T Consensus         6 ~m~kIl~~~~------~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~   76 (430)
T 2iyf_A            6 TPAHIAMFSI------AAHGHVNPSLEVIRELVARGHRVTYAIPPVFAD---KVAATGPRPVLYHSTLPGPDADPEAWGS   76 (430)
T ss_dssp             --CEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHH---HHHTTSCEEEECCCCSCCTTSCGGGGCS
T ss_pred             ccceEEEEeC------CCCccccchHHHHHHHHHCCCeEEEEeCHHHHH---HHHhCCCEEEEcCCcCccccccccccch
Confidence            3579999753      236777778999999999999999999765311   111111112111110 0 0         


Q ss_pred             c--------c-----------ccCCCCCCcEEEecCCchhH---HhhhcCCcEEEEecchh-----HHHHhhhhhhhhhh
Q 044542          147 S--------V-----------NLNNDGAFDYVHTESVSLPH---WRAKMVPNVAVTWHGIW-----YEVMHSKLFGELFS  199 (465)
Q Consensus       147 ~--------~-----------~~~~~~~~DiI~~~~~~~~~---~~~~~~p~~v~~~h~~~-----~~~~~~~~~~~~~~  199 (465)
                      .        .           ...++.+||+|+++......   ....++| .+...++..     ........+.....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (430)
T 2iyf_A           77 TLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVP-AVSLSPNLVAWKGYEEEVAEPMWREPRQ  155 (430)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCC-EEEEESSCCCCTTHHHHTHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCC-EEEEecccccccccccccccchhhhhcc
Confidence            0        0           00067899999997653322   2234678 777765432     00000000000000


Q ss_pred             cCCCCCCCchhhhhhhhHHHHHH-------HHhhcccCEEEEeChhHHHHHHHHhCCCCCC-EEEecCCCCCCCccCCcc
Q 044542          200 NQNGVLPGSMTELQEAMPRLVDE-------IRFFSSYNQHICISNSAAEVLVKIYQLPQRN-VHVILNGVDETKFVHDPE  271 (465)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~k-i~vi~ngvd~~~~~~~~~  271 (465)
                      .     .. ...+...+.+....       ..++..++.+++.+....+....  .++ .+ +..+.++++....     
T Consensus       156 ~-----~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~-~~~v~~vG~~~~~~~~-----  221 (430)
T 2iyf_A          156 T-----ER-GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHAD--RVD-EDVYTFVGACQGDRAE-----  221 (430)
T ss_dssp             S-----HH-HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGG--GSC-TTTEEECCCCC----------
T ss_pred             c-----hH-HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcc--cCC-CccEEEeCCcCCCCCC-----
Confidence            0     00 00111111121110       01233568888887665433322  122 34 7777765542110     


Q ss_pred             cCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEE-EEEeCCcchhHHHHhcCCeEEcCCCChhH
Q 044542          272 AGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL-LVAGTGPWGRRYAELGQNVKVLGALEAHQ  350 (465)
Q Consensus       272 ~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~  350 (465)
                       ...+...   .++++.+++++|++. .++.+.+.+++..+.+. +++++ +++|++...+.++++.++|.+.|++++. 
T Consensus       222 -~~~~~~~---~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~-  294 (430)
T 2iyf_A          222 -EGGWQRP---AGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQL-  294 (430)
T ss_dssp             -CCCCCCC---TTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---CGGGGCSCCTTEEEESSCCHH-
T ss_pred             -CCCCccc---cCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCChHHhccCCCCeEEEecCCHH-
Confidence             0011110   224457888999987 55555555555555432 46777 5788876655555566899999999754 


Q ss_pred             HHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHh
Q 044542          351 LSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIR  423 (465)
Q Consensus       351 ~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~  423 (465)
                        ++|+.||++|..+    | .++++|||++|+|+|+.+.++    .. +.+.+.+.|+.++.   |+++++++|.++++
T Consensus       295 --~~l~~ad~~v~~~----G-~~t~~Ea~~~G~P~i~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~  366 (430)
T 2iyf_A          295 --AILRQADLFVTHA----G-AGGSQEGLATATPMIAVPQAVDQFGNA-DMLQGLGVARKLATEEATADLLRETALALVD  366 (430)
T ss_dssp             --HHHTTCSEEEECC----C-HHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCCC-CCHHHHHHHHHHHHH
T ss_pred             --HHhhccCEEEECC----C-ccHHHHHHHhCCCEEECCCccchHHHH-HHHHHcCCEEEcCCCCCCHHHHHHHHHHHHc
Confidence              7899999998743    2 379999999999999998764    23 45667778999874   78999999999999


Q ss_pred             CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542          424 DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      + ++.++++++.+++.... ++++++++.+++++++
T Consensus       367 ~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~  400 (430)
T 2iyf_A          367 D-PEVARRLRRIQAEMAQE-GGTRRAADLIEAELPA  400 (430)
T ss_dssp             C-HHHHHHHHHHHHHHHHH-CHHHHHHHHHHTTSCC
T ss_pred             C-HHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHhhc
Confidence            8 88889999888887765 6999998888877654

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.83  E-value=3.4e-20  Score=180.32  Aligned_cols=155  Identities=17%  Similarity=0.120  Sum_probs=106.8

Q ss_pred             CCcEEEEEeecccccc----------CHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHH
Q 044542          285 NVSLVMGVAGRLVRDK----------GHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEF  354 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~K----------g~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~  354 (465)
                      +.+.+++++|++...|          .++.+++++..+     +++++++|.+...+.++++.++|.+.|+++   +.++
T Consensus       226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~---~~~l  297 (398)
T 4fzr_A          226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKLAQTLQPLPEGVLAAGQFP---LSAI  297 (398)
T ss_dssp             SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------CCTTEEEESCCC---HHHH
T ss_pred             CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcchhhhccCCCcEEEeCcCC---HHHH
Confidence            4457887889997554          345555555443     578888887766666667779999999984   6788


Q ss_pred             HHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCC----CcceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChH
Q 044542          355 YNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYP----SIVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPK  427 (465)
Q Consensus       355 ~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~g----g~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~  427 (465)
                      +..||++|..     |.+.+++|||++|+|+|+...+    +.. +.+.+.+.|++++.   |+++|+++|.+++++ ++
T Consensus       298 l~~ad~~v~~-----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~-~~  370 (398)
T 4fzr_A          298 MPACDVVVHH-----GGHGTTLTCLSEGVPQVSVPVIAEVWDSA-RLLHAAGAGVEVPWEQAGVESVLAACARIRDD-SS  370 (398)
T ss_dssp             GGGCSEEEEC-----CCHHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHTTSEEECC-------CHHHHHHHHHHC-TH
T ss_pred             HhhCCEEEec-----CCHHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHHHHHHHHHHHHhC-HH
Confidence            9999999952     3467999999999999996554    444 56777889999875   689999999999999 88


Q ss_pred             HHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542          428 VLQRKGLACKEHALSMFTATKMASAYER  455 (465)
Q Consensus       428 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~  455 (465)
                      .++++++.+++.... .+++.+++.+++
T Consensus       371 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~  397 (398)
T 4fzr_A          371 YVGNARRLAAEMATL-PTPADIVRLIEQ  397 (398)
T ss_dssp             HHHHHHHHHHHHTTS-CCHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHcC-CCHHHHHHHHhc
Confidence            999998888887655 799998887653

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.83  E-value=5.9e-20  Score=178.24  Aligned_cols=163  Identities=15%  Similarity=0.149  Sum_probs=126.6

Q ss_pred             CCCcEEEEEeeccccccCH-HHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          284 ANVSLVMGVAGRLVRDKGH-PLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       284 ~~~~~~l~~~Grl~~~Kg~-~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      .+++.++++.|+....|+. ..+++++.+. ++.|+++++++|.+...+.++.+.++|++.|+++..+   ++..||++|
T Consensus       216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~---ll~~ad~~v  291 (391)
T 3tsa_A          216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNL---FLRTCELVI  291 (391)
T ss_dssp             CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGG---TGGGCSEEE
T ss_pred             CCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHH---HHhhCCEEE
Confidence            3455778788998775544 6777777777 6667999999988766555556668999999997554   559999999


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCCC----CcceeeeeeCCceEEeCC-----CHHHHHHHHHHHHhCChHHHHHHH
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYP----SIVRTVVVNEELGYTFSP-----NVKSFVEALELVIRDGPKVLQRKG  433 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~g----g~~~e~v~~~~~G~l~~~-----d~~~la~~i~~ll~~~~~~~~~~~  433 (465)
                      ..     |.+.+++|||++|+|+|+....    +.. +.+.+.+.|.++++     |++++++++.++++| ++.+++++
T Consensus       292 ~~-----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~  364 (391)
T 3tsa_A          292 CA-----GGSGTAFTATRLGIPQLVLPQYFDQFDYA-RNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGD-TGFAAAAI  364 (391)
T ss_dssp             EC-----CCHHHHHHHHHTTCCEEECCCSTTHHHHH-HHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTC-THHHHHHH
T ss_pred             eC-----CCHHHHHHHHHhCCCEEecCCcccHHHHH-HHHHHcCCEEecCcccccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence            63     3457899999999999996543    233 45677788999874     799999999999999 88899998


Q ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          434 LACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       434 ~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +.+++.... .+++.+++.++++..
T Consensus       365 ~~~~~~~~~-~~~~~~~~~i~~~~~  388 (391)
T 3tsa_A          365 KLSDEITAM-PHPAALVRTLENTAA  388 (391)
T ss_dssp             HHHHHHHTS-CCHHHHHHHHHHC--
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHh
Confidence            888777655 799999988877654

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.78  E-value=1.4e-17  Score=161.90  Aligned_cols=345  Identities=14%  Similarity=0.125  Sum_probs=194.8

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC-------------
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH-------------  145 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------  145 (465)
                      +|||++++..      ..|.-..+..|+++|+++||+|++++......   .....+..+.......             
T Consensus         4 M~~il~~~~~------~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~---~~~~~G~~~~~~~~~~~~~~~~~~~~~~~   74 (402)
T 3ia7_A            4 QRHILFANVQ------GHGHVYPSLGLVSELARRGHRITYVTTPLFAD---EVKAAGAEVVLYKSEFDTFHVPEVVKQED   74 (402)
T ss_dssp             CCEEEEECCS------SHHHHHHHHHHHHHHHHTTCEEEEEECHHHHH---HHHHTTCEEEECCCGGGTSSSSSSSCCTT
T ss_pred             CCEEEEEeCC------CCcccccHHHHHHHHHhCCCEEEEEcCHHHHH---HHHHcCCEEEecccccccccccccccccc
Confidence            4599998752      35677788899999999999999999642110   1111222222221100             


Q ss_pred             ------------------CccccCCCCCCcEEEec-CCchhH---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCC
Q 044542          146 ------------------GSVNLNNDGAFDYVHTE-SVSLPH---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNG  203 (465)
Q Consensus       146 ------------------~~~~~~~~~~~DiI~~~-~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  203 (465)
                                        ......++.+||+||++ ......   ....++| ++...++.......... .........
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~~-~~~~~~~~~  152 (402)
T 3ia7_A           75 AETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRP-AVRLTGGFAANEHYSLF-KELWKSNGQ  152 (402)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCC-EEEEESSCCCBTTBCHH-HHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCC-EEEEecccccCcccccc-ccccccccc
Confidence                              00001167899999998 333222   2335788 77777664321000000 000000000


Q ss_pred             CCCCchhhhhhhhHHHHHH-------HHhhccc-CEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcc
Q 044542          204 VLPGSMTELQEAMPRLVDE-------IRFFSSY-NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVR  275 (465)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~-d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~  275 (465)
                      ..+.....+...+.+....       ..+.... +..++......+.....+   ..++..+.+.++....      ...
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~~------~~~  223 (402)
T 3ia7_A          153 RHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF---DERFAFVGPTLTGRDG------QPG  223 (402)
T ss_dssp             CCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC---CTTEEECCCCCCC----------CC
T ss_pred             cChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC---CCCeEEeCCCCCCccc------CCC
Confidence            0000001111111111110       0111222 555555544333322211   2445555443321100      001


Q ss_pred             cccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEE-EeCCcchhHHHHhcCCeEEcCCCChhHHHHH
Q 044542          276 FPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLV-AGTGPWGRRYAELGQNVKVLGALEAHQLSEF  354 (465)
Q Consensus       276 ~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~  354 (465)
                      ...   ...+++.++++.|+....+ .+.+.++++.+.+. + +++++ +|++...+.++++.++|.+.|++++.   ++
T Consensus       224 ~~~---~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---~l  294 (402)
T 3ia7_A          224 WQP---PRPDAPVLLVSLGNQFNEH-PEFFRACAQAFADT-P-WHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFH---SV  294 (402)
T ss_dssp             CCC---SSTTCCEEEEECCSCSSCC-HHHHHHHHHHHTTS-S-CEEEEECCTTSCGGGGCSCCTTEEEESCCCHH---HH
T ss_pred             Ccc---cCCCCCEEEEECCCCCcch-HHHHHHHHHHHhcC-C-cEEEEEeCCcCChhhhCCCCCcEEEecCCCHH---HH
Confidence            110   1234457888899886554 22333333333322 3 55444 67665555666666899999999644   89


Q ss_pred             HHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCC-----CCcceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCCh
Q 044542          355 YNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNY-----PSIVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGP  426 (465)
Q Consensus       355 ~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~-----gg~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~  426 (465)
                      ++.||++|..+    | ..+++|||++|+|+|+...     .+.. +.+.+.+.|..+..   +++++++++.++++| +
T Consensus       295 l~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~-~  367 (402)
T 3ia7_A          295 LAHARACLTHG----T-TGAVLEAFAAGVPLVLVPHFATEAAPSA-ERVIELGLGSVLRPDQLEPASIREAVERLAAD-S  367 (402)
T ss_dssp             HTTEEEEEECC----C-HHHHHHHHHTTCCEEECGGGCGGGHHHH-HHHHHTTSEEECCGGGCSHHHHHHHHHHHHHC-H
T ss_pred             HhhCCEEEECC----C-HHHHHHHHHhCCCEEEeCCCcccHHHHH-HHHHHcCCEEEccCCCCCHHHHHHHHHHHHcC-H
Confidence            99999999743    2 3688999999999996654     2343 55677788999875   799999999999999 8


Q ss_pred             HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542          427 KVLQRKGLACKEHALSMFTATKMASAYERFFLRM  460 (465)
Q Consensus       427 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  460 (465)
                      +.++++++.+++.... .+++..++.+++++.+.
T Consensus       368 ~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~  400 (402)
T 3ia7_A          368 AVRERVRRMQRDILSS-GGPARAADEVEAYLGRV  400 (402)
T ss_dssp             HHHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhC-ChHHHHHHHHHHHHhhc
Confidence            8888888877776554 79999999999888653

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.77  E-value=3e-19  Score=171.36  Aligned_cols=334  Identities=10%  Similarity=0.039  Sum_probs=209.4

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCC-CCCcc-----cCCcceEEEeecCCCcc---
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRK-PHNDV-----HQGNLHVHFAANDHGSV---  148 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~~~~~-----~~~~~~v~~~~~~~~~~---  148 (465)
                      .++|+++|+..=|       --.-+.-+.++|.+. +++.++....... ...++     ....+.+..-.......   
T Consensus         8 ~~~~~~~v~GtRp-------e~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~   79 (385)
T 4hwg_A            8 HMLKVMTIVGTRP-------ELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSI   79 (385)
T ss_dssp             CCCEEEEEECSHH-------HHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHH
T ss_pred             hhhheeEEEEcCH-------hHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCCCCCHHHHH
Confidence            3569999986432       123466778888776 8877777664321 11111     11112222111111110   


Q ss_pred             --------ccCCCCCCcEEEecCC---chh--HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542          149 --------NLNNDGAFDYVHTESV---SLP--HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA  215 (465)
Q Consensus       149 --------~~~~~~~~DiI~~~~~---~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (465)
                              ...++.+||+|++++.   .+.  .....++| ++....|...                     +...+...
T Consensus        80 ~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IP-v~h~eaglrs---------------------~~~~~pee  137 (385)
T 4hwg_A           80 GLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIP-IFHMEAGNRC---------------------FDQRVPEE  137 (385)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCC-EEEESCCCCC---------------------SCTTSTHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCC-EEEEeCCCcc---------------------ccccCcHH
Confidence                    0116789999999863   222  22335778 6554444210                     00001011


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG  294 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G  294 (465)
                      ..+.    ..-+.+|.+++.++..++.+.+ .|++++++.++.|++ |...+......+..+++++|++++ +++++..|
T Consensus       138 ~nR~----~~~~~a~~~~~~te~~~~~l~~-~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~-~~iLvt~h  211 (385)
T 4hwg_A          138 INRK----IIDHISDVNITLTEHARRYLIA-EGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPK-QYFLISSH  211 (385)
T ss_dssp             HHHH----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTT-SEEEEEEC
T ss_pred             HHHH----HHHhhhceeecCCHHHHHHHHH-cCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcC-CEEEEEeC
Confidence            1111    1124578899999999999988 699989999999864 432221112234567888998764 47777777


Q ss_pred             ccc---cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecc
Q 044542          295 RLV---RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPT  365 (465)
Q Consensus       295 rl~---~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps  365 (465)
                      |..   ..|+++.+++|+.++.+++ ++.+++......++.++++      .++|.+++.+++.++..+|+.||+++.+|
T Consensus       212 r~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S  290 (385)
T 4hwg_A          212 REENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS  290 (385)
T ss_dssp             CC-----CHHHHHHHHHHHHHHHHH-CCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC
T ss_pred             CchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC
Confidence            753   3377899999999997755 6777765543344455544      26899999998889999999999999655


Q ss_pred             cCCCCCcHHHHHHHHcCCeEEecCCCC-cceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHH-HHhh
Q 044542          366 LRPQGLDLTLIEAMHCGRTVLTPNYPS-IVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEH-ALSM  443 (465)
Q Consensus       366 ~~~eg~~~~~~EAma~G~PvI~s~~gg-~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~-~~~~  443 (465)
                            |..+.||+++|+|+|+.+... .+ |.+..| .+.++..|++++++++.+++++ ++.+++|++++..+ ... 
T Consensus       291 ------Ggv~~EA~alG~Pvv~~~~~ter~-e~v~~G-~~~lv~~d~~~i~~ai~~ll~d-~~~~~~m~~~~~~~~g~g-  360 (385)
T 4hwg_A          291 ------GTITEEASILNLPALNIREAHERP-EGMDAG-TLIMSGFKAERVLQAVKTITEE-HDNNKRTQGLVPDYNEAG-  360 (385)
T ss_dssp             ------TTHHHHHHHTTCCEEECSSSCSCT-HHHHHT-CCEECCSSHHHHHHHHHHHHTT-CBTTBCCSCCCHHHHTCC-
T ss_pred             ------ccHHHHHHHcCCCEEEcCCCccch-hhhhcC-ceEEcCCCHHHHHHHHHHHHhC-hHHHHHhhccCCCCCCCC-
Confidence                  236799999999999976543 34 555444 6777766999999999999998 66666665545444 333 


Q ss_pred             CCHHHHHHHHHHHHH
Q 044542          444 FTATKMASAYERFFL  458 (465)
Q Consensus       444 fs~~~~~~~~~~~~~  458 (465)
                      .+.+++++.+.+.+.
T Consensus       361 ~aa~rI~~~l~~~~~  375 (385)
T 4hwg_A          361 LVSKKILRIVLSYVD  375 (385)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhh
Confidence            466667666666553

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.77  E-value=3.2e-17  Score=159.31  Aligned_cols=158  Identities=13%  Similarity=0.044  Sum_probs=117.7

Q ss_pred             CCCcEEEEEeeccccc-cCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          284 ANVSLVMGVAGRLVRD-KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       284 ~~~~~~l~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      .+++.+++++|++... ++.+.+.++++.+.+.  +++++++|++...+.++.+.++|.+.|+++   +.+++..||++|
T Consensus       230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~---~~~ll~~ad~~v  304 (398)
T 3oti_A          230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDISPLGTLPRNVRAVGWTP---LHTLLRTCTAVV  304 (398)
T ss_dssp             CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCCGGGCSCCTTEEEESSCC---HHHHHTTCSEEE
T ss_pred             CCCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcChhhhccCCCcEEEEccCC---HHHHHhhCCEEE
Confidence            3455788889999665 4666666666666543  688899887766655666678999999984   667889999999


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCC----CCcce-eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHH
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNY----PSIVR-TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGL  434 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~----gg~~~-e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~  434 (465)
                      ..     |-+.+++|||++|+|+|+...    ++... +.+.+.+.|+.++.   +++.++    ++++| ++.++++++
T Consensus       305 ~~-----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~-~~~~~~~~~  374 (398)
T 3oti_A          305 HH-----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGD-ESLRTAARE  374 (398)
T ss_dssp             EC-----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHC-HHHHHHHHH
T ss_pred             EC-----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcC-HHHHHHHHH
Confidence            63     345699999999999999543    43320 34556778999875   455555    88888 899999988


Q ss_pred             HHHHHHHhhCCHHHHHHHHHHHH
Q 044542          435 ACKEHALSMFTATKMASAYERFF  457 (465)
Q Consensus       435 ~~~~~~~~~fs~~~~~~~~~~~~  457 (465)
                      .+++.... .+++.+++.++++.
T Consensus       375 ~~~~~~~~-~~~~~~~~~l~~l~  396 (398)
T 3oti_A          375 VREEMVAL-PTPAETVRRIVERI  396 (398)
T ss_dssp             HHHHHHTS-CCHHHHHHHHHHHH
T ss_pred             HHHHHHhC-CCHHHHHHHHHHHh
Confidence            88877655 79999999888765

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.75  E-value=8.6e-17  Score=157.18  Aligned_cols=161  Identities=19%  Similarity=0.209  Sum_probs=116.9

Q ss_pred             CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEE-EeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542          285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLV-AGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVN  363 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~  363 (465)
                      +.+.++++.|+.....+ +.+..+++.+.+ .+ +++++ +|.+...+.++++.++|.+.|++++.   +++..||++|.
T Consensus       246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al~~-~~-~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~---~ll~~ad~~v~  319 (415)
T 3rsc_A          246 DLPVVLVSLGTTFNDRP-GFFRDCARAFDG-QP-WHVVMTLGGQVDPAALGDLPPNVEAHRWVPHV---KVLEQATVCVT  319 (415)
T ss_dssp             CCCEEEEECTTTSCCCH-HHHHHHHHHHTT-SS-CEEEEECTTTSCGGGGCCCCTTEEEESCCCHH---HHHHHEEEEEE
T ss_pred             CCCEEEEECCCCCCChH-HHHHHHHHHHhc-CC-cEEEEEeCCCCChHHhcCCCCcEEEEecCCHH---HHHhhCCEEEE
Confidence            44578888898754332 222233333322 23 66666 67665556666666899999999744   88999999997


Q ss_pred             cccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHH
Q 044542          364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLAC  436 (465)
Q Consensus       364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~  436 (465)
                      .+    | ..+++|||++|+|+|+....+    .. +.+.+.+.|..+..   +++++++++.+++++ ++.++++.+.+
T Consensus       320 ~~----G-~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~  392 (415)
T 3rsc_A          320 HG----G-MGTLMEALYWGRPLVVVPQSFDVQPMA-RRVDQLGLGAVLPGEKADGDTLLAAVGAVAAD-PALLARVEAMR  392 (415)
T ss_dssp             SC----C-HHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHHTCEEECCGGGCCHHHHHHHHHHHHTC-HHHHHHHHHHH
T ss_pred             CC----c-HHHHHHHHHhCCCEEEeCCcchHHHHH-HHHHHcCCEEEcccCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence            43    2 358899999999999965432    33 45566778888875   799999999999999 88888888877


Q ss_pred             HHHHHhhCCHHHHHHHHHHHHHH
Q 044542          437 KEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       437 ~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      ++.... .+.+..++.+++++.+
T Consensus       393 ~~~~~~-~~~~~~~~~i~~~~~~  414 (415)
T 3rsc_A          393 GHVRRA-GGAARAADAVEAYLAR  414 (415)
T ss_dssp             HHHHHS-CHHHHHHHHHHHHHHH
T ss_pred             HHHHhc-CHHHHHHHHHHHHhhc
Confidence            776655 7899999988888764

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.72  E-value=2.6e-16  Score=152.14  Aligned_cols=157  Identities=14%  Similarity=0.094  Sum_probs=119.7

Q ss_pred             CCcEEEEEeeccccc-------cCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHh
Q 044542          285 NVSLVMGVAGRLVRD-------KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNA  357 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~-------Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~  357 (465)
                      +++.+++++|++...       +.++.+++++..+     ++++++++.++..+.++.+.++|.+ |+++.   .++|..
T Consensus       209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~---~~~l~~  279 (384)
T 2p6p_A          209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTVAEALRAEVPQARV-GWTPL---DVVAPT  279 (384)
T ss_dssp             SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHHHHHHHHHCTTSEE-ECCCH---HHHGGG
T ss_pred             CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCCHHhhCCCCCceEE-cCCCH---HHHHhh
Confidence            345778899998765       5667777777654     5778776554444455566789999 99964   567899


Q ss_pred             cCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHH
Q 044542          358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQ  430 (465)
Q Consensus       358 aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~  430 (465)
                      ||++|..+    | +++++|||++|+|+|+.+..+    .. +.+.+.+.|+.++.   ++++++++|.+++.+ ++.++
T Consensus       280 ~d~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~dq~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~  352 (384)
T 2p6p_A          280 CDLLVHHA----G-GVSTLTGLSAGVPQLLIPKGSVLEAPA-RRVADYGAAIALLPGEDSTEAIADSCQELQAK-DTYAR  352 (384)
T ss_dssp             CSEEEECS----C-TTHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTCCCHHHHHHHHHHHHHC-HHHHH
T ss_pred             CCEEEeCC----c-HHHHHHHHHhCCCEEEccCcccchHHH-HHHHHCCCeEecCcCCCCHHHHHHHHHHHHcC-HHHHH
Confidence            99999843    2 358999999999999998753    33 44566778998874   799999999999998 88888


Q ss_pred             HHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          431 RKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       431 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      ++++.+++.... -..+..++.+.++..
T Consensus       353 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~  379 (384)
T 2p6p_A          353 RAQDLSREISGM-PLPATVVTALEQLAH  379 (384)
T ss_dssp             HHHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCHHHHHHHHHHHhh
Confidence            888887777655 488888888777654

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.65  E-value=6.2e-15  Score=145.06  Aligned_cols=159  Identities=12%  Similarity=0.034  Sum_probs=119.2

Q ss_pred             CCCcEEEEEeecccc-----ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhc
Q 044542          284 ANVSLVMGVAGRLVR-----DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNAL  358 (465)
Q Consensus       284 ~~~~~~l~~~Grl~~-----~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~a  358 (465)
                      ++++.++++.|+...     .+.+..+++++..+     ++++++++.+...+.++++.++|.+.|++++   .++|..|
T Consensus       265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~---~~ll~~a  336 (441)
T 2yjn_A          265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQLEGVANIPDNVRTVGFVPM---HALLPTC  336 (441)
T ss_dssp             CSSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTTSSCSSCCSSEEECCSCCH---HHHGGGC
T ss_pred             CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcchhhhccCCCCEEEecCCCH---HHHHhhC
Confidence            344578888999875     37888888888765     5678777655544434345589999999975   4568999


Q ss_pred             CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHH
Q 044542          359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQR  431 (465)
Q Consensus       359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~  431 (465)
                      |++|..     |-+.+++|||++|+|+|+.+..+    .. +.+.+.+.|+.++.   ++++++++|.+++++ ++.+++
T Consensus       337 d~~V~~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~  409 (441)
T 2yjn_A          337 AATVHH-----GGPGSWHTAAIHGVPQVILPDGWDTGVRA-QRTQEFGAGIALPVPELTPDQLRESVKRVLDD-PAHRAG  409 (441)
T ss_dssp             SEEEEC-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTTCCHHHHHHHHHHHHHC-HHHHHH
T ss_pred             CEEEEC-----CCHHHHHHHHHhCCCEEEeCCcccHHHHH-HHHHHcCCEEEcccccCCHHHHHHHHHHHhcC-HHHHHH
Confidence            999972     33579999999999999998743    23 45666778998874   789999999999998 888888


Q ss_pred             HHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          432 KGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       432 ~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +.+.+++.... .+.+.+++.+++++.
T Consensus       410 ~~~~~~~~~~~-~~~~~~~~~i~~~~~  435 (441)
T 2yjn_A          410 AARMRDDMLAE-PSPAEVVGICEELAA  435 (441)
T ss_dssp             HHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence            88887776654 699999998888765

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.64  E-value=5e-15  Score=146.21  Aligned_cols=325  Identities=12%  Similarity=0.056  Sum_probs=199.4

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC------CccccC
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------GSVNLN  151 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~  151 (465)
                      ++.+|++++..+    ...-+.+....+..+. +..++|+.+. ... .+... ......++......      ..-..+
T Consensus       274 K~l~ig~ls~f~----~~HsV~r~~~~~l~~d-R~~FEV~~Ys-~~~-~D~~t-r~~~d~f~~l~~~s~~~~~~~ia~~I  345 (631)
T 3q3e_A          274 KPVMVVLLEHFH----SAHSIYRTHSTSMIAA-REHFYLIGLG-SPS-VDQAG-QEVFDEFHLVAGDNMKQKLEFIRSVC  345 (631)
T ss_dssp             EEEEEEECSSCC----TTSHHHHHHHHHHHHH-TTTSEEEEEE-CTT-SCHHH-HTTSSEEEECCCSSHHHHHHHHHHHH
T ss_pred             CeEEEEEeCccc----CCCcHHHHHHHHHHhh-hhcEEEEEEe-CCC-CCHHH-HhcCcEEEECCCCCccccHHHHHHHH
Confidence            445666666553    2334445555555553 5579999998 332 11111 11222222222211      001122


Q ss_pred             CCCCCcEEEecCC---chhHHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhh
Q 044542          152 NDGAFDYVHTESV---SLPHWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF  226 (465)
Q Consensus       152 ~~~~~DiI~~~~~---~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (465)
                      ++.++||++--+.   .....+  .+--| +-+++-|.+.-                  .+                  +
T Consensus       346 r~d~IDILVdL~g~t~~~~i~~aa~RpAP-VQvs~lGyp~T------------------TG------------------l  388 (631)
T 3q3e_A          346 ESNGAAIFYMPSIGMDMTTIFASNTRLAP-IQAIALGHPAT------------------TH------------------S  388 (631)
T ss_dssp             HHHTCSEEEESCCSSSHHHHHHTTSCCSS-EEEEECSSCSC------------------CC------------------C
T ss_pred             HhcCCCEEEECCCCCCchhHHHHhCCCch-heEeccCCCcc------------------cC------------------c
Confidence            6778999886432   222222  12336 88888875311                  11                  2


Q ss_pred             cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCC-CcEEEEEeeccccccCHHHH
Q 044542          227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLL  305 (465)
Q Consensus       227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~l  305 (465)
                      ...|++++-....-  -...|   .+++..+|+..-  .+.+...  ...+..++++.+ +.++++++++  ..|..+.+
T Consensus       389 ~~iDY~i~D~~~~~--~~~~y---sEklirLP~~~~--~~~p~~~--~p~r~~~~lp~~~G~v~Fg~fn~--~~Ki~p~~  457 (631)
T 3q3e_A          389 DFIEYVIVEDDYVG--SEECF---SETLLRLPKDAL--PYVPSAL--APEKVDYLLRENPEVVNIGIAST--TMKLNPYF  457 (631)
T ss_dssp             TTCCEEEEEGGGCC--CGGGC---SSEEEEECTTSS--CCCCCTT--CCSSCCCCCCSCCSEEEEEEEEC--STTCCHHH
T ss_pred             ccCCEEEeCCCCCC--cccCc---eeeEEECCCCcc--ccCCccc--CCccccccCCcCCCeEEEEECCc--cccCCHHH
Confidence            34466665332111  12222   488888887421  1222221  123566788874 4578888886  47999999


Q ss_pred             HHHHHHhhhcCCCeEEE--EEeCC--cchhHHH---Hh--cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHH
Q 044542          306 YEAFSSITRDHPGVYLL--VAGTG--PWGRRYA---EL--GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLI  376 (465)
Q Consensus       306 l~a~~~l~~~~~~~~l~--ivG~g--~~~~~~~---~l--~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~  376 (465)
                      ++++.++.++.|+..+.  ++|.+  ......+   +.  .++|.|.|.++.++....|+.+|+++.|+.+  +.|++.+
T Consensus       458 l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy--~GgtTtl  535 (631)
T 3q3e_A          458 LEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPF--GNTNGII  535 (631)
T ss_dssp             HHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSS--CCSHHHH
T ss_pred             HHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcc--cCChHHH
Confidence            99999999988887654  36743  3222222   22  2799999999999999999999999999854  5599999


Q ss_pred             HHHHcCCeEEecCCCCcceeeee------eCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHh--hCC--H
Q 044542          377 EAMHCGRTVLTPNYPSIVRTVVV------NEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALS--MFT--A  446 (465)
Q Consensus       377 EAma~G~PvI~s~~gg~~~e~v~------~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--~fs--~  446 (465)
                      |||++|+|||+...++.. ..+.      -|-.++++..|.+++++...++..| ++.+++++++.++....  .|+  .
T Consensus       536 EALwmGVPVVTl~G~~~a-sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D-~~~l~~LR~~Lr~~~~~spLFd~~~  613 (631)
T 3q3e_A          536 DMVTLGLVGVCKTGAEVH-EHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAEN-HQERLELRRYIIENNGLNTLFTGDP  613 (631)
T ss_dssp             HHHHTTCCEEEECCSSHH-HHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHC-HHHHHHHHHHHHHSCCHHHHTCSCC
T ss_pred             HHHHcCCCEEeccCCcHH-HHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHhhhCCCcchhH
Confidence            999999999998766555 3221      1333433333899999999999999 99999999988877544  233  3


Q ss_pred             HHHHHHHHHHHHHhcC
Q 044542          447 TKMASAYERFFLRMKN  462 (465)
Q Consensus       447 ~~~~~~~~~~~~~~~~  462 (465)
                      +.+.+.|.+++++..+
T Consensus       614 ~~~e~~ye~~~~~w~~  629 (631)
T 3q3e_A          614 RPMGQVFLEKLNAFLK  629 (631)
T ss_dssp             THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            5556666666655443

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.60  E-value=2.5e-13  Score=132.92  Aligned_cols=161  Identities=16%  Similarity=0.099  Sum_probs=114.0

Q ss_pred             CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEE-EEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542          285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL-LVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVN  363 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~  363 (465)
                      +++.++++.|+.. .+..+.+.+++..+.+  .++++ +++|.+...+.++++.++|.+.+++++.   ++|..+|++|.
T Consensus       254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~d~~v~  327 (424)
T 2iya_A          254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQL---DILTKASAFIT  327 (424)
T ss_dssp             SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHH---HHHTTCSEEEE
T ss_pred             CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCChHHhccCCCCeEEecCCCHH---HHHhhCCEEEE
Confidence            3457777889886 3444444444444433  35666 5568765444444456899999999754   68999999886


Q ss_pred             cccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHH
Q 044542          364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLAC  436 (465)
Q Consensus       364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~  436 (465)
                      .     +-.++++||+++|+|+|+....+    .. +.+.+.+.|+.++.   ++++++++|.+++++ ++.++++.+.+
T Consensus       328 ~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~  400 (424)
T 2iya_A          328 H-----AGMGSTMEALSNAVPMVAVPQIAEQTMNA-ERIVELGLGRHIPRDQVTAEKLREAVLAVASD-PGVAERLAAVR  400 (424)
T ss_dssp             C-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred             C-----CchhHHHHHHHcCCCEEEecCccchHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence            3     22479999999999999987643    12 34556678888873   899999999999998 88777777766


Q ss_pred             HHHHHhhCCHHHHHHHHHHHHHH
Q 044542          437 KEHALSMFTATKMASAYERFFLR  459 (465)
Q Consensus       437 ~~~~~~~fs~~~~~~~~~~~~~~  459 (465)
                      ++... ....+..++.+++++.+
T Consensus       401 ~~~~~-~~~~~~~~~~i~~~~~~  422 (424)
T 2iya_A          401 QEIRE-AGGARAAADILEGILAE  422 (424)
T ss_dssp             HHHHT-SCHHHHHHHHHHHHHHH
T ss_pred             HHHHh-cCcHHHHHHHHHHHHhc
Confidence            66543 35778888877776643

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.54  E-value=1.2e-13  Score=133.94  Aligned_cols=160  Identities=16%  Similarity=0.101  Sum_probs=104.4

Q ss_pred             CCCCcEEEEEeeccccccC-HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeE
Q 044542          283 PANVSLVMGVAGRLVRDKG-HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVF  361 (465)
Q Consensus       283 ~~~~~~~l~~~Grl~~~Kg-~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~  361 (465)
                      ..+++.+++..|++...++ .+.+.+++..+.+  .+..+++.+.+...+....+.++|.+.+++|+.   ++|..+|++
T Consensus       234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~~  308 (400)
T 4amg_A          234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLALLGELPANVRVVEWIPLG---ALLETCDAI  308 (400)
T ss_dssp             CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCCCCCCCCTTEEEECCCCHH---HHHTTCSEE
T ss_pred             cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCccccccccCCCCEEEEeecCHH---HHhhhhhhe
Confidence            3445577778888765443 3444455555544  356666666544444444566899999999754   567899998


Q ss_pred             EecccCCCCCcHHHHHHHHcCCeEEecCCCCc----ceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542          362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI----VRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACK  437 (465)
Q Consensus       362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~----~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~  437 (465)
                      |..     +-.+++.|||++|+|+|+....+-    . +.+.+.+.|+.++. .+..+++|.++++| ++.+++..+-++
T Consensus       309 v~h-----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na-~~v~~~G~g~~l~~-~~~~~~al~~lL~d-~~~r~~a~~l~~  380 (400)
T 4amg_A          309 IHH-----GGSGTLLTALAAGVPQCVIPHGSYQDTNR-DVLTGLGIGFDAEA-GSLGAEQCRRLLDD-AGLREAALRVRQ  380 (400)
T ss_dssp             EEC-----CCHHHHHHHHHHTCCEEECCC---CHHHH-HHHHHHTSEEECCT-TTCSHHHHHHHHHC-HHHHHHHHHHHH
T ss_pred             ecc-----CCccHHHHHHHhCCCEEEecCcccHHHHH-HHHHHCCCEEEcCC-CCchHHHHHHHHcC-HHHHHHHHHHHH
Confidence            852     335689999999999999766542    2 34455567887774 44567889999999 877766655544


Q ss_pred             HHHHhhCCHHHHHHHHHHH
Q 044542          438 EHALSMFTATKMASAYERF  456 (465)
Q Consensus       438 ~~~~~~fs~~~~~~~~~~~  456 (465)
                      +. ...-+....++.++++
T Consensus       381 ~~-~~~~~~~~~a~~le~l  398 (400)
T 4amg_A          381 EM-SEMPPPAETAAXLVAL  398 (400)
T ss_dssp             HH-HTSCCHHHHHHHHHHH
T ss_pred             HH-HcCCCHHHHHHHHHHh
Confidence            44 4445777777776654

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.42  E-value=4.1e-12  Score=123.87  Aligned_cols=151  Identities=13%  Similarity=0.106  Sum_probs=102.9

Q ss_pred             cEEEEEeeccc-cccCHHHHHHHHHHhhhcCCCeEEEEE-eCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEec
Q 044542          287 SLVMGVAGRLV-RDKGHPLLYEAFSSITRDHPGVYLLVA-GTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNP  364 (465)
Q Consensus       287 ~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~p  364 (465)
                      +.++++.|+.. ..+..+.++++++.+     +.+++++ |.+...  ...+.++|.+.|++++.+   ++..||++|..
T Consensus       239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~~---~l~~~d~~v~~  308 (415)
T 1iir_A          239 PPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLV--LPDDGADCFAIGEVNHQV---LFGRVAAVIHH  308 (415)
T ss_dssp             CCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCC--CSSCGGGEEECSSCCHHH---HGGGSSEEEEC
T ss_pred             CeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCccc--ccCCCCCEEEeCcCChHH---HHhhCCEEEeC
Confidence            46777889984 777788888888776     2345554 765432  123447899999998654   57999999973


Q ss_pred             ccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542          365 TLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACK  437 (465)
Q Consensus       365 s~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~  437 (465)
                      +    | .++++|||++|+|+|+.+..+    .. +.+.+.+.|+.++.   +.++++++|.++ .+ ++.++++.+.++
T Consensus       309 ~----G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~~  380 (415)
T 1iir_A          309 G----G-AGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGPIPTFDSLSAALATA-LT-PETHARATAVAG  380 (415)
T ss_dssp             C----C-HHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS-HHHHHHHHHHHH
T ss_pred             C----C-hhHHHHHHHcCCCEEECCCCCccHHHH-HHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC-HHHHHHHHHHHH
Confidence            2    2 379999999999999987754    22 34566678888863   899999999999 87 777766665554


Q ss_pred             HHHHhhCCHHHHHHHHHHH
Q 044542          438 EHALSMFTATKMASAYERF  456 (465)
Q Consensus       438 ~~~~~~fs~~~~~~~~~~~  456 (465)
                      +.. ..-..+.+++.++++
T Consensus       381 ~~~-~~~~~~~~~~~i~~~  398 (415)
T 1iir_A          381 TIR-TDGAAVAARLLLDAV  398 (415)
T ss_dssp             HSC-SCHHHHHHHHHHHHH
T ss_pred             HHh-hcChHHHHHHHHHHH
Confidence            432 223445554444444

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.37  E-value=7e-12  Score=121.68  Aligned_cols=156  Identities=15%  Similarity=0.095  Sum_probs=106.1

Q ss_pred             CCcEEEEEeeccc-cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542          285 NVSLVMGVAGRLV-RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVN  363 (465)
Q Consensus       285 ~~~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~  363 (465)
                      +++.+++..|+.. ..+.++.+++++..+     ++++++.+.....+. .++.++|.+.++++.   ..++..+|++|.
T Consensus       220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~-~~~~~~v~~~~~~~~---~~ll~~~d~~v~  290 (404)
T 3h4t_A          220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGR-IDEGDDCLVVGEVNH---QVLFGRVAAVVH  290 (404)
T ss_dssp             SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCC-SSCCTTEEEESSCCH---HHHGGGSSEEEE
T ss_pred             CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccccc-ccCCCCEEEecCCCH---HHHHhhCcEEEE
Confidence            3456777889887 566677777777765     456666643322211 123489999999964   457789999997


Q ss_pred             cccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542          364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACK  437 (465)
Q Consensus       364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~  437 (465)
                      .+    | ..++.||+++|+|+|+....+-..   +.+.+.+.|..++.   +++++.+++.++++  ++.++++.+.+.
T Consensus       291 ~g----G-~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~--~~~~~~~~~~~~  363 (404)
T 3h4t_A          291 HG----G-AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT--PGIRARAAAVAG  363 (404)
T ss_dssp             CC----C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS--HHHHHHHHHHHT
T ss_pred             CC----c-HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence            33    2 368999999999999987654310   23455667888764   79999999999986  566666655544


Q ss_pred             HHHHhhCCHHHHHHHHHHHHH
Q 044542          438 EHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       438 ~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      +...  -..+..++.++++++
T Consensus       364 ~~~~--~~~~~~~~~i~~~~~  382 (404)
T 3h4t_A          364 TIRT--DGTTVAAKLLLEAIS  382 (404)
T ss_dssp             TCCC--CHHHHHHHHHHHHHH
T ss_pred             HHhh--hHHHHHHHHHHHHHh
Confidence            4332  366777777766664

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=99.34  E-value=1e-10  Score=120.94  Aligned_cols=181  Identities=14%  Similarity=0.159  Sum_probs=139.1

Q ss_pred             ccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch-h----HHHHhc---CCeEEcCCC
Q 044542          275 RFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG-R----RYAELG---QNVKVLGAL  346 (465)
Q Consensus       275 ~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~-~----~~~~l~---~~V~~~g~v  346 (465)
                      ..|..+|++++. ++++++.++  .|=-+.+++++.++.++.|+-+|++....... +    ..++.+   ++|+|.+.+
T Consensus       512 ~~R~~~gLp~~~-v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~  588 (723)
T 4gyw_A          512 TTRSQYGLPEDA-IVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVA  588 (723)
T ss_dssp             EEGGGGTCCTTS-EEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred             cchhhcCCCCCC-EEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCC
Confidence            457788999887 777666654  57778899999999999999999988765432 2    233333   899999999


Q ss_pred             ChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce----eeeeeCCceEEeCCCHHHHHHHHHHHH
Q 044542          347 EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR----TVVVNEELGYTFSPNVKSFVEALELVI  422 (465)
Q Consensus       347 ~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~----e~v~~~~~G~l~~~d~~~la~~i~~ll  422 (465)
                      +.++....|+.+|+++-|-.+  +-+++.+||+.+|+|||+-....+..    .++..-+..-++..|.++..+...++.
T Consensus       589 ~~~~~l~~~~~~Di~LDt~p~--~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la  666 (723)
T 4gyw_A          589 PKEEHVRRGQLADVCLDTPLC--NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLG  666 (723)
T ss_dssp             CHHHHHHHGGGCSEEECCSSS--CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHH
T ss_pred             CHHHHHHHhCCCeEEeCCCCc--CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHh
Confidence            999999999999999997644  56899999999999999976444331    111111112233348999999999999


Q ss_pred             hCChHHHHHHHHHHHHHHHh--hCCHHHHHHHHHHHHHHhc
Q 044542          423 RDGPKVLQRKGLACKEHALS--MFTATKMASAYERFFLRMK  461 (465)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~  461 (465)
                      .| ++.+.+++++-++....  -|+.+..++.+++.|+++-
T Consensus       667 ~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w  706 (723)
T 4gyw_A          667 TD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMW  706 (723)
T ss_dssp             HC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred             cC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence            99 89999998888777655  5899999999999998763

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.32  E-value=2.7e-12  Score=108.61  Aligned_cols=130  Identities=17%  Similarity=0.178  Sum_probs=96.2

Q ss_pred             CCcEEEEEeeccc---cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeE
Q 044542          285 NVSLVMGVAGRLV---RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVF  361 (465)
Q Consensus       285 ~~~~~l~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~  361 (465)
                      +.+.+++++|++.   +.|.+..+++++..+     +.++++++.+...+   .+.++|++.|+++++++..+ ..||++
T Consensus        20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~---~~~~~v~~~~~~~~~~~l~~-~~ad~~   90 (170)
T 2o6l_A           20 ENGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKPD---TLGLNTRLYKWIPQNDLLGH-PKTRAF   90 (170)
T ss_dssp             TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCCT---TCCTTEEEESSCCHHHHHTS-TTEEEE
T ss_pred             CCCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCcc---cCCCcEEEecCCCHHHHhcC-CCcCEE
Confidence            3347788899985   567777777777654     35677776554322   34579999999987554433 999999


Q ss_pred             EecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHH
Q 044542          362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQ  430 (465)
Q Consensus       362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~  430 (465)
                      |..     +-+.+++|||++|+|+|+.+..+    .. +.+.+.+.|+.++.   ++++++++|.+++.+ ++.++
T Consensus        91 I~~-----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~  159 (170)
T 2o6l_A           91 ITH-----GGANGIYEAIYHGIPMVGIPLFADQPDNI-AHMKARGAAVRVDFNTMSSTDLLNALKRVIND-PSYKE  159 (170)
T ss_dssp             EEC-----CCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-HHHHH
T ss_pred             EEc-----CCccHHHHHHHcCCCEEeccchhhHHHHH-HHHHHcCCeEEeccccCCHHHHHHHHHHHHcC-HHHHH
Confidence            973     23589999999999999998753    23 45667788999874   789999999999998 65433

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.28  E-value=3.2e-11  Score=117.55  Aligned_cols=134  Identities=13%  Similarity=0.089  Sum_probs=95.4

Q ss_pred             cEEEEEeeccc---cccCHHHHHHHHHHhhhcCCCeEEEEE-eCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          287 SLVMGVAGRLV---RDKGHPLLYEAFSSITRDHPGVYLLVA-GTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       287 ~~~l~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      +.++++.|+..   ..+..+.++++++.+     +.+++++ |.+...  ...+.++|.+.++++.   .++|..||++|
T Consensus       238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~---~~ll~~~d~~v  307 (416)
T 1rrv_A          238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV--LPDDRDDCFAIDEVNF---QALFRRVAAVI  307 (416)
T ss_dssp             CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC--CSCCCTTEEEESSCCH---HHHGGGSSEEE
T ss_pred             CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc--ccCCCCCEEEeccCCh---HHHhccCCEEE
Confidence            46666889874   456677777777765     3455554 765332  1334579999999975   45679999999


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHH
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLA  435 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~  435 (465)
                      ..    .| ..++.||+++|+|+|+....+    .. +.+.+.+.|+.++.   +.++++++|.++ .+ ++.++++++.
T Consensus       308 ~~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~  379 (416)
T 1rrv_A          308 HH----GS-AGTEHVATRAGVPQLVIPRNTDQPYFA-GRVAALGIGVAHDGPTPTFESLSAALTTV-LA-PETRARAEAV  379 (416)
T ss_dssp             EC----CC-HHHHHHHHHHTCCEEECCCSBTHHHHH-HHHHHHTSEEECSSSCCCHHHHHHHHHHH-TS-HHHHHHHHHH
T ss_pred             ec----CC-hhHHHHHHHcCCCEEEccCCCCcHHHH-HHHHHCCCccCCCCCCCCHHHHHHHHHHh-hC-HHHHHHHHHH
Confidence            72    23 469999999999999987643    22 24556678888863   899999999999 87 7776666654


Q ss_pred             HHH
Q 044542          436 CKE  438 (465)
Q Consensus       436 ~~~  438 (465)
                      +++
T Consensus       380 ~~~  382 (416)
T 1rrv_A          380 AGM  382 (416)
T ss_dssp             TTT
T ss_pred             HHH
Confidence            443

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=99.02  E-value=1e-09  Score=110.89  Aligned_cols=232  Identities=14%  Similarity=0.137  Sum_probs=163.1

Q ss_pred             HhhcccCEEEEeChhHHHHHHH-----HhCCCCCCEEEecCCCCCCCcc----CC-------------------------
Q 044542          224 RFFSSYNQHICISNSAAEVLVK-----IYQLPQRNVHVILNGVDETKFV----HD-------------------------  269 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~-----~~~~~~~ki~vi~ngvd~~~~~----~~-------------------------  269 (465)
                      ..+..++.|-+||+-..+.+++     .+..-+.++.-|-|||+...+.    |.                         
T Consensus       409 lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~  488 (796)
T 1l5w_A          409 LCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEK  488 (796)
T ss_dssp             HHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGG
T ss_pred             HHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHh
Confidence            4457789999999999988864     2333467899999999876661    11                         


Q ss_pred             -ccc--------------Ccc----cccccCCCCC-CcEEEEEeeccccccCHHH-HHHHHHHhhh--cC-----CCeEE
Q 044542          270 -PEA--------------GVR----FPEKLGVPAN-VSLVMGVAGRLVRDKGHPL-LYEAFSSITR--DH-----PGVYL  321 (465)
Q Consensus       270 -~~~--------------~~~----~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l  321 (465)
                       .++              +..    +++++|++-+ +.+.++++.|+..+||+++ ++..+.++.+  .+     .++++
T Consensus       489 ~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~  568 (796)
T 1l5w_A          489 FADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVF  568 (796)
T ss_dssp             GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEE
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEE
Confidence             000              111    3455677543 3478889999999999999 7887776654  12     35899


Q ss_pred             EEEeCCcch--hH------HHHh----------cC--CeEEcCCCChhHHHHHHHhcCeEEeccc--CCCCCcHHHHHHH
Q 044542          322 LVAGTGPWG--RR------YAEL----------GQ--NVKVLGALEAHQLSEFYNALDVFVNPTL--RPQGLDLTLIEAM  379 (465)
Q Consensus       322 ~ivG~g~~~--~~------~~~l----------~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~--~~eg~~~~~~EAm  379 (465)
                      ++.|.+...  ..      +..+          .+  +|.|+...+.+-...++.+||+.++||.  . |.+|++-+=||
T Consensus       569 If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~-EAsGTs~MKam  647 (796)
T 1l5w_A          569 LFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGK-EASGTGNMKLA  647 (796)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTT-CCCCSHHHHHH
T ss_pred             EEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHHH
Confidence            999986421  11      2222          24  7999988887778889999999999998  5 99999999999


Q ss_pred             HcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHHHHHH------HHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542          380 HCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFVEALE------LVIRDGPKVLQRKGLACKEHALSMFTATKMAS  451 (465)
Q Consensus       380 a~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la~~i~------~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  451 (465)
                      ..|.+.|++--|... |+.++  .++|++|..+++++.+.-.      .+..+.+ .++++.++   .+...|||+.- +
T Consensus       648 ~NGaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~---~~~g~fs~~~~-~  721 (796)
T 1l5w_A          648 LNGALTVGTLDGANV-EIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLKE---LESGKYSDGDK-H  721 (796)
T ss_dssp             HTTCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHH---HHHTTTTTTCT-T
T ss_pred             HcCCeeecCcCCeee-ehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHHH---HHcCCCCCCcH-H
Confidence            999999988777776 55433  5799999877777663211      1222213 33333333   34567999875 7


Q ss_pred             HHHHHHHHhcC
Q 044542          452 AYERFFLRMKN  462 (465)
Q Consensus       452 ~~~~~~~~~~~  462 (465)
                      .|.++|+.+++
T Consensus       722 ~y~~Ly~~L~~  732 (796)
T 1l5w_A          722 AFDQMLHSIGK  732 (796)
T ss_dssp             TTHHHHHHTST
T ss_pred             HHHHHHHHHhc
Confidence            79999998864

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=99.01  E-value=1.3e-09  Score=110.01  Aligned_cols=231  Identities=15%  Similarity=0.140  Sum_probs=160.5

Q ss_pred             HhhcccCEEEEeChhHHHHHHH-----HhCCCCCCEEEecCCCCCCCcc----CC-------------------------
Q 044542          224 RFFSSYNQHICISNSAAEVLVK-----IYQLPQRNVHVILNGVDETKFV----HD-------------------------  269 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~-----~~~~~~~ki~vi~ngvd~~~~~----~~-------------------------  269 (465)
                      ..+..++.|-+||+...+.+++     .+..-+.++.-|-|||+...+.    |.                         
T Consensus       398 lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~  477 (796)
T 2c4m_A          398 IACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLR  477 (796)
T ss_dssp             HHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGG
T ss_pred             HHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHH
Confidence            4467789999999999988874     2334467899999999988882    21                         


Q ss_pred             --ccc--------------Ccc----cccccCCCCC-CcEEEEEeeccccccCHHH-HHHHHHHhhh--cC-----CCeE
Q 044542          270 --PEA--------------GVR----FPEKLGVPAN-VSLVMGVAGRLVRDKGHPL-LYEAFSSITR--DH-----PGVY  320 (465)
Q Consensus       270 --~~~--------------~~~----~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~-ll~a~~~l~~--~~-----~~~~  320 (465)
                        .++              +..    ++++.|++-+ +.+.++++.|+..+||+++ ++..+.++.+  .+     .+++
T Consensus       478 ~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q  557 (796)
T 2c4m_A          478 SYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPART  557 (796)
T ss_dssp             GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEE
T ss_pred             hhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeE
Confidence              000              111    3455676543 3478889999999999999 8888777753  22     3589


Q ss_pred             EEEEeCCcch--hH------HHHh----------cC--CeEEcCCCChhHHHHHHHhcCeEEeccc--CCCCCcHHHHHH
Q 044542          321 LLVAGTGPWG--RR------YAEL----------GQ--NVKVLGALEAHQLSEFYNALDVFVNPTL--RPQGLDLTLIEA  378 (465)
Q Consensus       321 l~ivG~g~~~--~~------~~~l----------~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~--~~eg~~~~~~EA  378 (465)
                      +++.|.+...  ..      +..+          .+  +|.|+...+.+-...++.+||+.++||.  . |.+|++-+=+
T Consensus       558 ~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~-EAsGTs~MKa  636 (796)
T 2c4m_A          558 VIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGK-EASGTSNMKF  636 (796)
T ss_dssp             EEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTS-CSCCHHHHHH
T ss_pred             EEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHH
Confidence            9999986421  11      2222          24  7999988887778889999999999998  5 9999999999


Q ss_pred             HHcCCeEEecCCCCcceeeeee--CCceEEeCC---CHHHHHHH---HHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542          379 MHCGRTVLTPNYPSIVRTVVVN--EELGYTFSP---NVKSFVEA---LELVIRDGPKVLQRKGLACKEHALSMFTATKMA  450 (465)
Q Consensus       379 ma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~---d~~~la~~---i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  450 (465)
                      |..|.+.|++--|... |+.++  .++|++|..   ++.++...   ..-.-.+ + .++++.+   ..+...|||+.- 
T Consensus       637 m~NGaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~-~-~~~~vvd---~~~~g~fs~~~~-  709 (796)
T 2c4m_A          637 MMNGALTLGTMDGANV-EIVDSVGEENAYIFGARVEELPALRESYKPYELYETV-P-GLKRALD---ALDNGTLNDNNS-  709 (796)
T ss_dssp             HHTTCEEEEESSTHHH-HHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHS-T-THHHHHH---TTTSSSSCCTTC-
T ss_pred             HHcCCeEEeccCCeEe-ehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcC-H-HHHHHHH---HHHcCCCCCCCH-
Confidence            9999999988777666 55433  469999986   44444432   1112222 2 2222222   223456888776 


Q ss_pred             HHHHHHHHHhcC
Q 044542          451 SAYERFFLRMKN  462 (465)
Q Consensus       451 ~~~~~~~~~~~~  462 (465)
                      +.|.++|+.+++
T Consensus       710 ~~y~~Ly~~L~~  721 (796)
T 2c4m_A          710 GLFYDLKHSLIH  721 (796)
T ss_dssp             CHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHh
Confidence            779999988864

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=99.00  E-value=3.5e-09  Score=107.41  Aligned_cols=230  Identities=14%  Similarity=0.144  Sum_probs=160.2

Q ss_pred             HhhcccCEEEEeChhHHHHHHHH-----hCCCCCCEEEecCCCCCCCc----cCCcc-----------------------
Q 044542          224 RFFSSYNQHICISNSAAEVLVKI-----YQLPQRNVHVILNGVDETKF----VHDPE-----------------------  271 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~-----~~~~~~ki~vi~ngvd~~~~----~~~~~-----------------------  271 (465)
                      ..+..++.|-+||+-..+.+++.     +...++++.-|-|||+...+    .|.-.                       
T Consensus       433 lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~  512 (824)
T 2gj4_A          433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLS  512 (824)
T ss_dssp             HHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGG
T ss_pred             HHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHh
Confidence            44677899999999988877531     23346899999999998887    22100                       


Q ss_pred             -c----------------Ccc----cccccCCCCC-CcEEEEEeeccccccCHHHH-HHHHHHhhh--cCC-----CeEE
Q 044542          272 -A----------------GVR----FPEKLGVPAN-VSLVMGVAGRLVRDKGHPLL-YEAFSSITR--DHP-----GVYL  321 (465)
Q Consensus       272 -~----------------~~~----~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~l-l~a~~~l~~--~~~-----~~~l  321 (465)
                       .                +..    ++++.|++-+ +.+.++++.|+..+||++++ +..+.++.+  ..|     +.++
T Consensus       513 y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~  592 (824)
T 2gj4_A          513 YVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTV  592 (824)
T ss_dssp             GTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEE
Confidence             0                011    3344666533 34888899999999999997 777777641  233     5799


Q ss_pred             EEEeCCcch-hH-------HHHh----------cC--CeEEcCCCChhHHHHHHHhcCeEEeccc--CCCCCcHHHHHHH
Q 044542          322 LVAGTGPWG-RR-------YAEL----------GQ--NVKVLGALEAHQLSEFYNALDVFVNPTL--RPQGLDLTLIEAM  379 (465)
Q Consensus       322 ~ivG~g~~~-~~-------~~~l----------~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~--~~eg~~~~~~EAm  379 (465)
                      ++.|.+... +.       +.++          .+  +|.|+...+.+-...++.+||+.++||.  . |.+|++-+=||
T Consensus       593 If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~-EAsGTs~MKam  671 (824)
T 2gj4_A          593 MIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGT-EASGTGNMKFM  671 (824)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTS-CSCCSHHHHHH
T ss_pred             EEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHHH
Confidence            999986421 11       2222          24  7999988887778889999999999998  5 99999999999


Q ss_pred             HcCCeEEecCCCCcceeeee--eCCceEEeCCCHHHHHHHHH-------HHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542          380 HCGRTVLTPNYPSIVRTVVV--NEELGYTFSPNVKSFVEALE-------LVIRDGPKVLQRKGLACKEHALSMFTATKMA  450 (465)
Q Consensus       380 a~G~PvI~s~~gg~~~e~v~--~~~~G~l~~~d~~~la~~i~-------~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  450 (465)
                      ..|.+.|++--|... |+..  ..++|++|...++++ .++.       .+... .+.++++.++   .+...|+|..- 
T Consensus       672 lNGaLtigtlDGanv-Ei~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~-~~~l~~v~d~---i~~g~fs~~~~-  744 (824)
T 2gj4_A          672 LNGALTIGTMDGANV-EMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR-IPELRQIIEQ---LSSGFFSPKQP-  744 (824)
T ss_dssp             HTTCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH-CHHHHHHHHH---HHHTTTCTTST-
T ss_pred             HcCceEEEEecCccc-hhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC-CHHHHHHHHH---HHhCCCCCCCh-
Confidence            999999998777665 5433  467899998766666 4442       23333 2233333333   34567998776 


Q ss_pred             HHHHHHHHHhc
Q 044542          451 SAYERFFLRMK  461 (465)
Q Consensus       451 ~~~~~~~~~~~  461 (465)
                      +.|.++|++++
T Consensus       745 ~~y~~ly~~l~  755 (824)
T 2gj4_A          745 DLFKDIVNMLM  755 (824)
T ss_dssp             TTTHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            67888887764

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.56  E-value=2.1e-05  Score=76.49  Aligned_cols=203  Identities=14%  Similarity=-0.017  Sum_probs=112.0

Q ss_pred             HhhcccCEEEEeChhHHHH-HHHHh-CCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542          224 RFFSSYNQHICISNSAAEV-LVKIY-QLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG  301 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~-~~~~~-~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg  301 (465)
                      ..+.+++.+++.|-...+. ..+.+ ... .++..|..-..... ........+..+-++..++++.+++..|..... .
T Consensus       211 ~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGPl~~~~~-~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-~  287 (454)
T 3hbf_A          211 LELPRANAVAINSFATIHPLIENELNSKF-KLLLNVGPFNLTTP-QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTP-P  287 (454)
T ss_dssp             HHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEECCCHHHHSC-CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCC-C
T ss_pred             HhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEECCcccccc-cccccchHHHHHHHhcCCCCceEEEecCCCCcC-C
Confidence            4567899999988654432 11111 121 35554433111000 000111122333333333455777788887642 2


Q ss_pred             HHHHHHHHHHhhhcCCCeEEEE-EeCCcc----hhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHH
Q 044542          302 HPLLYEAFSSITRDHPGVYLLV-AGTGPW----GRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLI  376 (465)
Q Consensus       302 ~~~ll~a~~~l~~~~~~~~l~i-vG~g~~----~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~  376 (465)
                      .+.+.+.+..+.+.  +.++++ +|.+..    ....++..+++.+.+|+|+   ..++..+++.++-++.  | -++++
T Consensus       288 ~~~~~el~~~l~~~--~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq---~~vL~h~~v~~fvtH~--G-~~S~~  359 (454)
T 3hbf_A          288 PHELTALAESLEEC--GFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQ---VEILKHSSVGVFLTHS--G-WNSVL  359 (454)
T ss_dssp             HHHHHHHHHHHHHH--CCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCH---HHHHHSTTEEEEEECC--C-HHHHH
T ss_pred             HHHHHHHHHHHHhC--CCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCH---HHHHhhcCcCeEEecC--C-cchHH
Confidence            34444444444432  344444 454321    1122334579999999975   4788899955544432  2 46999


Q ss_pred             HHHHcCCeEEecCCCCcc---eeeeeeC-CceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542          377 EAMHCGRTVLTPNYPSIV---RTVVVNE-ELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEH  439 (465)
Q Consensus       377 EAma~G~PvI~s~~gg~~---~e~v~~~-~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~  439 (465)
                      ||+++|+|+|+-...+-.   ...+.+. +.|+.++.   +.+++.+++.+++.+ + ..+++++++++.
T Consensus       360 Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~-~-~~~~~r~~a~~l  427 (454)
T 3hbf_A          360 ECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSS-E-KGGIMRQKIVKL  427 (454)
T ss_dssp             HHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSS-H-HHHHHHHHHHHH
T ss_pred             HHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCC-C-hHHHHHHHHHHH
Confidence            999999999997754311   0234443 67887763   799999999999987 4 223444444443

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=98.56  E-value=1.8e-05  Score=77.63  Aligned_cols=131  Identities=16%  Similarity=0.109  Sum_probs=82.0

Q ss_pred             CCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEE-EeCC--cc-hhHHHHh--cCCeEEcCCCChhHHHHHHH-
Q 044542          284 ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLV-AGTG--PW-GRRYAEL--GQNVKVLGALEAHQLSEFYN-  356 (465)
Q Consensus       284 ~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g--~~-~~~~~~l--~~~V~~~g~v~~~~~~~~~~-  356 (465)
                      ++++.+++..|.....-+.+.+.+++..+.+.  +.++++ +|.+  .. ....++.  .+++.+.+++|+.   .+|. 
T Consensus       274 ~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~---~vL~h  348 (463)
T 2acv_A          274 PDKSVVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQV---EVLAH  348 (463)
T ss_dssp             CTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHH---HHHHS
T ss_pred             CCCceEEEEeccccccCCHHHHHHHHHHHHhC--CCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHH---HHhCC
Confidence            34457777888876222333344444444332  345544 4543  12 1222334  5789999999754   4576 


Q ss_pred             -hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---ee-eeeCCceEEe-C-------C-CHHHHHHHHHHHH
Q 044542          357 -ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TV-VVNEELGYTF-S-------P-NVKSFVEALELVI  422 (465)
Q Consensus       357 -~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~-v~~~~~G~l~-~-------~-d~~~la~~i~~ll  422 (465)
                       ++|++|.   +  |-.++++||+++|+|+|+-...+-..   .. +.+-+.|+.+ .       . +.+++.++|.+++
T Consensus       349 ~~~~~fvt---h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll  423 (463)
T 2acv_A          349 KAIGGFVS---H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLM  423 (463)
T ss_dssp             TTEEEEEE---C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHT
T ss_pred             CccCeEEe---c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHH
Confidence             5777775   2  23479999999999999987643210   13 3566788888 2       4 7899999999999


Q ss_pred             hC
Q 044542          423 RD  424 (465)
Q Consensus       423 ~~  424 (465)
                      ++
T Consensus       424 ~~  425 (463)
T 2acv_A          424 DK  425 (463)
T ss_dssp             CT
T ss_pred             hc
Confidence            63

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=98.51  E-value=0.00027  Score=69.62  Aligned_cols=131  Identities=7%  Similarity=-0.142  Sum_probs=78.0

Q ss_pred             CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEE-eCCcc-----------hhHH-HHhcCC---------eEE
Q 044542          285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVA-GTGPW-----------GRRY-AELGQN---------VKV  342 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~-----------~~~~-~~l~~~---------V~~  342 (465)
                      +++.+.+..|.... ...+.+.+.+..+.+.  +.+++++ |.+..           ...+ ..+.++         +.+
T Consensus       267 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v  343 (480)
T 2vch_A          267 LGSVLYVSFGSGGT-LTCEQLNELALGLADS--EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI  343 (480)
T ss_dssp             TTCEEEEECTTTCC-CCHHHHHHHHHHHHHT--TCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEE
T ss_pred             CCceEEEecccccC-CCHHHHHHHHHHHHhc--CCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEE
Confidence            34477778888753 2344444444444432  3455444 43210           0111 123333         455


Q ss_pred             cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eee-eeCCceEEeC-----C-CHH
Q 044542          343 LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVV-VNEELGYTFS-----P-NVK  412 (465)
Q Consensus       343 ~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v-~~~~~G~l~~-----~-d~~  412 (465)
                      .+++|+.   .+|+.+++.++-++   |--++++||+++|+|+|+-...+-..   ..+ .+-+.|+.++     . +.+
T Consensus       344 ~~w~Pq~---~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~  417 (480)
T 2vch_A          344 PFWAPQA---QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE  417 (480)
T ss_dssp             ESCCCHH---HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHH
T ss_pred             eCccCHH---HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHH
Confidence            5699753   78999996444342   22469999999999999977643210   122 4556676664     3 789


Q ss_pred             HHHHHHHHHHhC
Q 044542          413 SFVEALELVIRD  424 (465)
Q Consensus       413 ~la~~i~~ll~~  424 (465)
                      +++++|.+++.+
T Consensus       418 ~l~~av~~vl~~  429 (480)
T 2vch_A          418 EVARVVKGLMEG  429 (480)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHhcC
Confidence            999999999984

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=98.49  E-value=3.2e-06  Score=79.81  Aligned_cols=107  Identities=12%  Similarity=0.091  Sum_probs=76.5

Q ss_pred             cccccccCCCCCCcEEEEEeec-cccccCHH--HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--------CCe-E
Q 044542          274 VRFPEKLGVPANVSLVMGVAGR-LVRDKGHP--LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--------QNV-K  341 (465)
Q Consensus       274 ~~~r~~~g~~~~~~~~l~~~Gr-l~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--------~~V-~  341 (465)
                      ..+++++|+..+++++++..|. ..+.|...  .+.+++..|.++  ++++++.|...+.+..+++.        .++ .
T Consensus       168 ~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~  245 (348)
T 1psw_A          168 SYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRN  245 (348)
T ss_dssp             HHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEE
T ss_pred             HHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhhHHHHHHHHHhhhhccccceEe
Confidence            3455667776555677778887 54666655  888888888765  67888888766555444432        134 5


Q ss_pred             EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          342 VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       342 ~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      +.|..+-.++..+++.||++|...    + | .+-.|.++|+|+|+-
T Consensus       246 l~g~~sl~e~~ali~~a~l~I~~D----s-g-~~HlAaa~g~P~v~l  286 (348)
T 1psw_A          246 LAGETQLDQAVILIAACKAIVTND----S-G-LMHVAAALNRPLVAL  286 (348)
T ss_dssp             CTTTSCHHHHHHHHHTSSEEEEES----S-H-HHHHHHHTTCCEEEE
T ss_pred             ccCcCCHHHHHHHHHhCCEEEecC----C-H-HHHHHHHcCCCEEEE
Confidence            688888899999999999999753    2 2 333499999999974

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=98.39  E-value=1.2e-06  Score=79.39  Aligned_cols=91  Identities=7%  Similarity=0.036  Sum_probs=60.9

Q ss_pred             cEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCc-chhHHHHhc---CCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGP-WGRRYAELG---QNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       287 ~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~-~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      +.+++++|......-...+++   .+.+. .. -.++.|.+. ..+.+++..   .++.+.+++  +++.++|++||++|
T Consensus       158 ~~ILv~~GG~d~~~l~~~vl~---~L~~~-~~-i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~--~~m~~~m~~aDlvI  230 (282)
T 3hbm_A          158 YDFFICMGGTDIKNLSLQIAS---ELPKT-KI-ISIATSSSNPNLKKLQKFAKLHNNIRLFIDH--ENIAKLMNESNKLI  230 (282)
T ss_dssp             EEEEEECCSCCTTCHHHHHHH---HSCTT-SC-EEEEECTTCTTHHHHHHHHHTCSSEEEEESC--SCHHHHHHTEEEEE
T ss_pred             CeEEEEECCCchhhHHHHHHH---HhhcC-CC-EEEEECCCchHHHHHHHHHhhCCCEEEEeCH--HHHHHHHHHCCEEE
Confidence            356667787654432333344   44332 23 355667653 334444432   589999998  79999999999999


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCC
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNY  390 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~  390 (465)
                      .+    .  |.++.|++++|+|.|....
T Consensus       231 ~~----g--G~T~~E~~~~g~P~i~ip~  252 (282)
T 3hbm_A          231 IS----A--SSLVNEALLLKANFKAICY  252 (282)
T ss_dssp             EE----S--SHHHHHHHHTTCCEEEECC
T ss_pred             EC----C--cHHHHHHHHcCCCEEEEeC
Confidence            72    2  3699999999999998654

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=97.81  E-value=9.8e-05  Score=76.87  Aligned_cols=188  Identities=11%  Similarity=0.089  Sum_probs=112.9

Q ss_pred             HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccC--CcccCcccccccCCCCCCcEEEEEeecccccc-
Q 044542          224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH--DPEAGVRFPEKLGVPANVSLVMGVAGRLVRDK-  300 (465)
Q Consensus       224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~--~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~K-  300 (465)
                      ...++.|.+++.|+...+.+.+.+++++.++.....+-....+..  .......+++++++++++ .+|+|+-.+.... 
T Consensus       474 ~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~k-k~ILyaPT~r~~~~  552 (729)
T 3l7i_A          474 RETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDK-KVIMYAPTWRDDEF  552 (729)
T ss_dssp             HHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSC-EEEEECCCCCGGGC
T ss_pred             HhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCC-eEEEEeeeeeCCcc
Confidence            345778999999999999999989987666665544322112211  112234578889998877 5555887665431 


Q ss_pred             ---C-----HHHHHHHHHHhhhcCCCeEEEEEeCCcchhH--HHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCC
Q 044542          301 ---G-----HPLLYEAFSSITRDHPGVYLLVAGTGPWGRR--YAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG  370 (465)
Q Consensus       301 ---g-----~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~--~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg  370 (465)
                         |     ...-++.+.+...  ++..+++-......+.  ...+.+.+......  .++.+++..||++|.=      
T Consensus       553 ~~~~~~~~~~~~~~~~l~~~l~--~~~~li~r~Hp~~~~~~~~~~~~~~~~~~~~~--~di~~ll~~aD~lITD------  622 (729)
T 3l7i_A          553 VSKGKYLFELKIDLDNLYKELG--DDYVILLRMHYLISNALDLSGYENFAIDVSNY--NDVSELFLISDCLITD------  622 (729)
T ss_dssp             CGGGSSCCCCTTCHHHHHHHHT--TTEEEEECCCHHHHTTCCCTTCTTTEEECTTC--SCHHHHHHTCSEEEES------
T ss_pred             ccccccccchhhHHHHHHHHcC--CCeEEEEecCcchhccccccccCCcEEeCCCC--cCHHHHHHHhCEEEee------
Confidence               1     1112333333222  3666666553211111  11122444444332  5899999999999962      


Q ss_pred             CcHHHHHHHHcCCeEEecCC--C-------CcceeeeeeCCceEEeCCCHHHHHHHHHHHHhC
Q 044542          371 LDLTLIEAMHCGRTVLTPNY--P-------SIVRTVVVNEELGYTFSPNVKSFVEALELVIRD  424 (465)
Q Consensus       371 ~~~~~~EAma~G~PvI~s~~--g-------g~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~  424 (465)
                      ++.++.|++..++|||....  .       |.--+ ..+.-.|-++. +.++|.++|......
T Consensus       623 ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~-~~~eL~~~i~~~~~~  683 (729)
T 3l7i_A          623 YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT-EPYGLAKELKNLDKV  683 (729)
T ss_dssp             SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES-SHHHHHHHHTTHHHH
T ss_pred             chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC-CHHHHHHHHhhhhcc
Confidence            34499999999999997621  1       11101 11223455555 899999999988764

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=97.80  E-value=0.00027  Score=69.11  Aligned_cols=198  Identities=11%  Similarity=-0.027  Sum_probs=110.7

Q ss_pred             hhcccCEEEEeChhHHHH-----HHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccc
Q 044542          225 FFSSYNQHICISNSAAEV-----LVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD  299 (465)
Q Consensus       225 ~~~~~d~ii~~S~~~~~~-----~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~  299 (465)
                      ..++++.+++.|-...+.     ++..+    .++..|..-.. ..-........++.+-++..++++.+++..|.....
T Consensus       210 ~~~~~~~vl~ns~~~le~~~~~~~~~~~----~~~~~vGpl~~-~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~  284 (456)
T 2c1x_A          210 VLPKATAVFINSFEELDDSLTNDLKSKL----KTYLNIGPFNL-ITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTP  284 (456)
T ss_dssp             HGGGSSCEEESSCGGGCHHHHHHHHHHS----SCEEECCCHHH-HC---------CHHHHHHTSCTTCEEEEECCSSCCC
T ss_pred             hhhhCCEEEECChHHHhHHHHHHHHhcC----CCEEEecCccc-CcccccccchhhHHHHHhcCCCcceEEEecCccccC
Confidence            347789998888554433     24432    24554442111 000000000112223233333445777788887643


Q ss_pred             cCHHHHHHHHHHhhhcCCCeEE-EEEeCCcc----hhHHHHhcCCeEEcCCCChhHHHHHHH--hcCeEEecccCCCCCc
Q 044542          300 KGHPLLYEAFSSITRDHPGVYL-LVAGTGPW----GRRYAELGQNVKVLGALEAHQLSEFYN--ALDVFVNPTLRPQGLD  372 (465)
Q Consensus       300 Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~----~~~~~~l~~~V~~~g~v~~~~~~~~~~--~aDv~v~ps~~~eg~~  372 (465)
                       ..+.+.+.+..+.+.  +.++ ..+|....    ....++..+++.+.+++|+.   ++|.  ++|++|.   +  |-.
T Consensus       285 -~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt---h--~G~  353 (456)
T 2c1x_A          285 -PPAEVVALSEALEAS--RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA---EVLAHEAVGAFVT---H--CGW  353 (456)
T ss_dssp             -CHHHHHHHHHHHHHH--TCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH---HHHTSTTEEEEEE---C--CCH
T ss_pred             -CHHHHHHHHHHHHhc--CCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH---HHhcCCcCCEEEe---c--CCc
Confidence             234444444444332  2334 44554321    11223445789999999753   5688  6778875   2  235


Q ss_pred             HHHHHHHHcCCeEEecCCCCcce---eeeeeC-CceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542          373 LTLIEAMHCGRTVLTPNYPSIVR---TVVVNE-ELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEHA  440 (465)
Q Consensus       373 ~~~~EAma~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~  440 (465)
                      ++++||+++|+|+|+-...+-..   ..+.+. +.|+.++.   +.+++.++|.+++.+ ++ .+++++++++..
T Consensus       354 ~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~-~~-~~~~r~~a~~l~  426 (456)
T 2c1x_A          354 NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EK-GKKLRENLRALR  426 (456)
T ss_dssp             HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS-HH-HHHHHHHHHHHH
T ss_pred             chHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCC-Cc-HHHHHHHHHHHH
Confidence            69999999999999987643210   234455 67888763   799999999999998 54 445555555443

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=97.77  E-value=0.00059  Score=67.25  Aligned_cols=147  Identities=12%  Similarity=-0.013  Sum_probs=91.1

Q ss_pred             CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-------c-hhHHHHhcCCeEEcCCCChhHHHHHH
Q 044542          285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-------W-GRRYAELGQNVKVLGALEAHQLSEFY  355 (465)
Q Consensus       285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-------~-~~~~~~l~~~V~~~g~v~~~~~~~~~  355 (465)
                      +++.+++..|.... ...+.+.+.+..+.+.  +.+++++ |...       . ....++..+++.+.+++|+.   .+|
T Consensus       294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~---~~L  367 (482)
T 2pq6_A          294 PGSVVYVNFGSTTV-MTPEQLLEFAWGLANC--KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD---KVL  367 (482)
T ss_dssp             TTCEEEEECCSSSC-CCHHHHHHHHHHHHHT--TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH---HHH
T ss_pred             CCceEEEecCCccc-CCHHHHHHHHHHHHhc--CCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH---HHh
Confidence            34477777888653 2334444444444332  4555554 4321       1 22234456899999999854   478


Q ss_pred             HhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeee-eCCceEEeCC--CHHHHHHHHHHHHhCChHHH
Q 044542          356 NALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVV-NEELGYTFSP--NVKSFVEALELVIRDGPKVL  429 (465)
Q Consensus       356 ~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~-~~~~G~l~~~--d~~~la~~i~~ll~~~~~~~  429 (465)
                      +.+++-++-+ +  |-.++++||+++|+|+|+-...+-..   ..+. +-+.|+.++.  +.+++.++|.+++.+ ++ .
T Consensus       368 ~h~~~~~~vt-h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~-~~-~  442 (482)
T 2pq6_A          368 NHPSIGGFLT-H--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG-DK-G  442 (482)
T ss_dssp             TSTTEEEEEE-C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTS-HH-H
T ss_pred             cCCCCCEEEe-c--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcC-Cc-H
Confidence            7766633323 2  23579999999999999987653210   1233 4567888764  899999999999998 64 3


Q ss_pred             HHHHHHHHHHHHh
Q 044542          430 QRKGLACKEHALS  442 (465)
Q Consensus       430 ~~~~~~~~~~~~~  442 (465)
                      +++++++++..+.
T Consensus       443 ~~~r~~a~~l~~~  455 (482)
T 2pq6_A          443 KKMKQKAMELKKK  455 (482)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5566665555433

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=97.65  E-value=9e-05  Score=64.31  Aligned_cols=76  Identities=7%  Similarity=0.039  Sum_probs=53.5

Q ss_pred             CeEEcCCCChhHHHHHHH-hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce-------eeeeeCCceEEeCCC
Q 044542          339 NVKVLGALEAHQLSEFYN-ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR-------TVVVNEELGYTFSPN  410 (465)
Q Consensus       339 ~V~~~g~v~~~~~~~~~~-~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~-------e~v~~~~~G~l~~~d  410 (465)
                      ++...+++  +++..+|+ .||++|.   +  +-..+++|++++|+|.|.-..+...+       +.+.+.+.++++  +
T Consensus       115 ~v~v~~f~--~~m~~~l~~~AdlvIs---h--aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~--~  185 (224)
T 2jzc_A          115 KVIGFDFS--TKMQSIIRDYSDLVIS---H--AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC--A  185 (224)
T ss_dssp             EEEECCSS--SSHHHHHHHHCSCEEE---S--SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE--C
T ss_pred             eEEEeecc--chHHHHHHhcCCEEEE---C--CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc--C
Confidence            56677887  69999999 9999997   3  23569999999999999877653211       123333445555  5


Q ss_pred             HHHHHHHHHHHHh
Q 044542          411 VKSFVEALELVIR  423 (465)
Q Consensus       411 ~~~la~~i~~ll~  423 (465)
                      ++.|.++|.++..
T Consensus       186 ~~~L~~~i~~l~~  198 (224)
T 2jzc_A          186 PTETGLIAGLRAS  198 (224)
T ss_dssp             SCTTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            6777777777633

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=96.83  E-value=0.0039  Score=58.46  Aligned_cols=104  Identities=12%  Similarity=0.068  Sum_probs=74.7

Q ss_pred             cccCCCCCCcEEEEEeeccccccCH--HHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc-----CCeEEcCCCChhH
Q 044542          278 EKLGVPANVSLVMGVAGRLVRDKGH--PLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG-----QNVKVLGALEAHQ  350 (465)
Q Consensus       278 ~~~g~~~~~~~~l~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~-----~~V~~~g~v~~~~  350 (465)
                      ++.|++.+++++++..|.-.+.|..  +.+.+++..+.++  +.++++.|...+.+..+++.     ..+.+.|..+-.+
T Consensus       177 ~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e  254 (349)
T 3tov_A          177 SSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGP  254 (349)
T ss_dssp             HHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHH
T ss_pred             HHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHH
Confidence            3456665666777777765556665  5788888888765  56778888766665555442     3466788888899


Q ss_pred             HHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542          351 LSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN  389 (465)
Q Consensus       351 ~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~  389 (465)
                      +..+++.||++|.+    ++ |..-+ |.++|+|+|+-=
T Consensus       255 ~~ali~~a~~~i~~----Ds-G~~Hl-Aaa~g~P~v~lf  287 (349)
T 3tov_A          255 LAAAMNRCNLLITN----DS-GPMHV-GISQGVPIVALY  287 (349)
T ss_dssp             HHHHHHTCSEEEEE----SS-HHHHH-HHTTTCCEEEEC
T ss_pred             HHHHHHhCCEEEEC----CC-CHHHH-HHhcCCCEEEEE
Confidence            99999999999974    22 33444 999999999853

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=96.35  E-value=0.015  Score=53.88  Aligned_cols=130  Identities=15%  Similarity=0.135  Sum_probs=81.7

Q ss_pred             CcEEEEEeeccccccCHH--HHHHHHHHhhhcCCCeEEEEE-eCCcchhHHHHhc---CCeEEcCCCChhHHHHHHHhcC
Q 044542          286 VSLVMGVAGRLVRDKGHP--LLYEAFSSITRDHPGVYLLVA-GTGPWGRRYAELG---QNVKVLGALEAHQLSEFYNALD  359 (465)
Q Consensus       286 ~~~~l~~~Grl~~~Kg~~--~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aD  359 (465)
                      ++++++..|.-.+.|...  .+.+++..+.++  +.++++. |...+.+..+++.   .++.+.|..+-.++..+++.||
T Consensus       178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~  255 (326)
T 2gt1_A          178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAK  255 (326)
T ss_dssp             TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCS
T ss_pred             CCEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCC
Confidence            346766777655666654  778888888653  6778886 5333333344432   4677889888899999999999


Q ss_pred             eEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce--------eeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542          360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR--------TVVVNEELGYTFSP-NVKSFVEALELVIRD  424 (465)
Q Consensus       360 v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~--------e~v~~~~~G~l~~~-d~~~la~~i~~ll~~  424 (465)
                      ++|..    ++ |..=+ |.++|+|+|+-=.+..+.        ..+..+... .... ++++..+++.++++.
T Consensus       256 l~I~~----DS-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~-cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          256 FVVSV----DT-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGN-ELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             EEEEE----SS-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGG-CGGGCCHHHHHHHHHHTTTT
T ss_pred             EEEec----CC-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcc-cccCCCHHHHHHHHHHHHHH
Confidence            99974    22 33444 777999999742111110        111111111 1223 788888888887765

>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0

Probab=93.79  E-value=0.25  Score=43.23  Aligned_cols=45  Identities=22%  Similarity=0.248  Sum_probs=30.7

Q ss_pred             CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542           76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH  128 (465)
Q Consensus        76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  128 (465)
                      .+++||||+....       |=...-+..|+++|.+ +|+|+|+++.......
T Consensus         8 ~~~~m~ILlTNDD-------Gi~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~   52 (261)
T 3ty2_A            8 ATPKLRLLLSNDD-------GVYAKGLAILAKTLAD-LGEVDVVAPDRNRSGA   52 (261)
T ss_dssp             ---CCEEEEECSS-------CTTCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred             cCCCCeEEEEcCC-------CCCCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence            3456999887764       1123347889999988 7899999998765443

>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*

Probab=92.85  E-value=3.6  Score=34.18  Aligned_cols=336  Identities=13%  Similarity=0.109  Sum_probs=177.7

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-ccCCcceEEEeecCCCccccCCCCCCcE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-VHQGNLHVHFAANDHGSVNLNNDGAFDY  158 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~Di  158 (465)
                      |||+++...   |....|...+..+.-..+.+.||+|+++...+....... .....-.+.....+.-.....--.+.|+
T Consensus         2 mricifmar---glegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdi   78 (401)
T 1xv5_A            2 MRICIFMAR---GLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSSHDHKSFSIPVILAKEYDKALKLVNDCDI   78 (401)
T ss_dssp             CEEEEEETT---CCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTTSSSCTTTCEEECTTTCHHHHHHHHTSCSE
T ss_pred             ceEEEEeec---cccccCceeeehhhhhhhhcCCcEEEEEEeccccccccccccCccccceeEehhhhHHHhhhhccCcE
Confidence            799998764   346678889988889999999999999887654432221 1111111222111100000002356899


Q ss_pred             EEecCCch-----------hHHhhhcCC--cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542          159 VHTESVSL-----------PHWRAKMVP--NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF  225 (465)
Q Consensus       159 I~~~~~~~-----------~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (465)
                      +++++...           ...+..-.|  ++++.-|+.....+...                           +....-
T Consensus        79 liinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrn---------------------------lgleet  131 (401)
T 1xv5_A           79 LIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRN---------------------------LGLEET  131 (401)
T ss_dssp             EEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHHTTB---------------------------SSHHHH
T ss_pred             EEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhhhhh---------------------------cChHHh
Confidence            88876421           111111122  27777787433222111                           001134


Q ss_pred             hcccCEEEEeChh---HHHHHHHHhCCCCCCEEEecCCCCC----CCccCCcccCcccccccCCCCC--CcEEEEEeecc
Q 044542          226 FSSYNQHICISNS---AAEVLVKIYQLPQRNVHVILNGVDE----TKFVHDPEAGVRFPEKLGVPAN--VSLVMGVAGRL  296 (465)
Q Consensus       226 ~~~~d~ii~~S~~---~~~~~~~~~~~~~~ki~vi~ngvd~----~~~~~~~~~~~~~r~~~g~~~~--~~~~l~~~Grl  296 (465)
                      .+++|.|+..|+.   .+-.+.+.|+   +.+... ..+..    -.|+|.- +...+|..+--.-.  .--+=-++||-
T Consensus       132 vrradvifshsdngdfnkvlmkewyp---etvslf-ddieeaptvynfqppm-divkvrstywkdvseinmninrwigrt  206 (401)
T 1xv5_A          132 VRRADVIFSHSDNGDFNKVLMKEWYP---ETVSLF-DDIEEAPTVYNFQPPM-DIVKVRSTYWKDVSEINMNINRWIGRT  206 (401)
T ss_dssp             HHHCSEEEESCTTSHHHHTHHHHHSC---SSCCSS-SCCCCCCCEEECCCCB-CHHHHHHHHCCCGGGCEEEEEEEECCS
T ss_pred             hhhhceEEecCCCCcHHHHHHHhhcc---chhhhh-cchhhCCceeccCCCc-eeeeeehhhhccHHHhhcchhhhhccc
Confidence            5789999988754   3334555543   111111 11110    0122211 11112222211111  10122378999


Q ss_pred             ccccCHHHHHHHHHHhhhcCCCeE-EEEEeCCcchh--HHHHh-----------------c--CCeEEcCCCChhHHHHH
Q 044542          297 VRDKGHPLLYEAFSSITRDHPGVY-LLVAGTGPWGR--RYAEL-----------------G--QNVKVLGALEAHQLSEF  354 (465)
Q Consensus       297 ~~~Kg~~~ll~a~~~l~~~~~~~~-l~ivG~g~~~~--~~~~l-----------------~--~~V~~~g~v~~~~~~~~  354 (465)
                      ..+||+-.+.+--+++.+  |.-+ -++-|-.....  .+++.                 +  ....++.-.-..++.+-
T Consensus       207 ttwkgfyqmfdfhekflk--pagkstvmeglerspafiaikekgipyeyygnreidkmnlapnqpaqildcyinsemler  284 (401)
T 1xv5_A          207 TTWKGFYQMFDFHEKFLK--PAGKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYINSEMLER  284 (401)
T ss_dssp             CGGGCHHHHHHHHHHTTT--TTTCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCCCHHHHHHH
T ss_pred             chhHhHHHHhhHHHHhcC--ccchhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCCCCCcchhhhheecHHHHHH
Confidence            999999999887777655  3222 33344221111  12221                 1  22334443335778888


Q ss_pred             HHhcCeEEecccC-----CCCCcHHHHHHHHcCCeEEe-cC--------CCCcceeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542          355 YNALDVFVNPTLR-----PQGLDLTLIEAMHCGRTVLT-PN--------YPSIVRTVVVNEELGYTFSP-NVKSFVEALE  419 (465)
Q Consensus       355 ~~~aDv~v~ps~~-----~eg~~~~~~EAma~G~PvI~-s~--------~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~  419 (465)
                      ++.+-..-.-|.-     ....-.+-+|--|||+-.+- -.        +...+  +-.++..-+.++. |.++-.+.|.
T Consensus       285 msksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntp--ltshdsgiiwfdendmestferik  362 (401)
T 1xv5_A          285 MSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTP--LTSHDSGIIWFDENDMESTFERIK  362 (401)
T ss_dssp             HHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCB--GGGSCCSCEEECTTCHHHHHHHHH
T ss_pred             hhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCc--ccccCCceEEecCCchHHHHHHHH
Confidence            8888777664421     13566789999999984443 21        11111  1122333345666 9999999999


Q ss_pred             HHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542          420 LVIRDGPKVLQRKGLACKEHALSMFTATKMASAYER  455 (465)
Q Consensus       420 ~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  455 (465)
                      ++-.+ +..+.+-+++++++.-++-+..-..+.-.+
T Consensus       363 elssd-ralydrerekayeflyqhqdssfcfkeqfd  397 (401)
T 1xv5_A          363 ELSSD-RALYDREREKAYEFLYQHQDSSFCFKEQFD  397 (401)
T ss_dssp             HHHTC-HHHHHHHHHHHHHHHHHHHBHHHHHHHHHH
T ss_pred             Hhccc-hhhhhHHHHHHHHHHHhcccccchhHhhcc
Confidence            99998 888888889999988776454444443333

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=89.20  E-value=3.6  Score=39.75  Aligned_cols=121  Identities=16%  Similarity=0.192  Sum_probs=64.2

Q ss_pred             ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--------------------hHHHH----hcCCeEEcCCCChhHHHH-
Q 044542          299 DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--------------------RRYAE----LGQNVKVLGALEAHQLSE-  353 (465)
Q Consensus       299 ~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--------------------~~~~~----l~~~V~~~g~v~~~~~~~-  353 (465)
                      .+.++.+.+.+....+  +.-+++|+|.|.-.                    +..+.    +.+-+.+.|.-.+.++.. 
T Consensus       218 ~~~i~~~~~~~g~~~~--~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~e  295 (461)
T 4g65_A          218 SNHIRSVMSELQRLEK--PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTE  295 (461)
T ss_dssp             TTTHHHHHHHTTGGGS--CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHH
T ss_pred             cchHHHHHHhhccccc--cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhh
Confidence            4667666666654432  33468888876321                    22222    224556677775555444 


Q ss_pred             -HHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcc-eeeeeeCCceEEeCCCHHH-HHHHHHHHHh
Q 044542          354 -FYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIV-RTVVVNEELGYTFSPNVKS-FVEALELVIR  423 (465)
Q Consensus       354 -~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~-~e~v~~~~~G~l~~~d~~~-la~~i~~ll~  423 (465)
                       =+..+|+++..+...|.-=++.+-|-.+|.+=+.+...... .+++...+...++.  +.. .+..|.+.+.
T Consensus       296 e~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~gid~vis--p~~~~a~~I~~~i~  366 (461)
T 4g65_A          296 ENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAIS--PQQATISALLTHVR  366 (461)
T ss_dssp             TTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSSSSCEEEC--HHHHHHHHHHHHHH
T ss_pred             cCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhccccceeeC--HHHHHHHHHHHHhh
Confidence             45789999986643232224556677788876655443211 13333333344444  333 3445555444

>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}

Probab=86.36  E-value=1.1  Score=39.93  Aligned_cols=45  Identities=20%  Similarity=0.317  Sum_probs=30.7

Q ss_pred             CCCCceeEEEEeCCCCCCCCCChH-HHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           75 PTFEKLKLAVFSKTWPIGAAPGGM-ERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        75 ~~~~~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      +.+++||||+|... |   ..++. .......++.|.+.||+|+++-...
T Consensus        18 ~~m~~MKiLII~aH-P---~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~   63 (280)
T 4gi5_A           18 LYFQSMKVLLIYAH-P---EPRSLNGALKNFAIRHLQQAGHEVQVSDLYA   63 (280)
T ss_dssp             ----CCEEEEEECC-S---CTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred             chhhCCeEEEEEeC-C---CCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence            35678999999875 3   34443 3455677889999999999987654

>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}

Probab=84.53  E-value=3.1  Score=36.39  Aligned_cols=41  Identities=15%  Similarity=0.167  Sum_probs=28.3

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH  128 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  128 (465)
                      +|||+....       |=...-+..|+++|.+.| +|+|+++.......
T Consensus         2 p~ILlTNDD-------Gi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~   42 (251)
T 2wqk_A            2 PTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRNLSGV   42 (251)
T ss_dssp             CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred             CEEEEEcCC-------CCCcHHHHHHHHHHHhCC-CEEEEeeCCCCccc
Confidence            478877653       111234788999999998 69999988765443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=82.69  E-value=1.3  Score=39.93  Aligned_cols=34  Identities=29%  Similarity=0.470  Sum_probs=25.7

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      |||++.          ||.+-.=..|++.|.++||+|++++..+
T Consensus         1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R~~   34 (298)
T 4b4o_A            1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSRKP   34 (298)
T ss_dssp             CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence            898876          3333345678999999999999998653

>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1

Probab=81.70  E-value=3.7  Score=32.13  Aligned_cols=42  Identities=19%  Similarity=0.086  Sum_probs=29.4

Q ss_pred             CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542           77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP  122 (465)
Q Consensus        77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  122 (465)
                      ...||++++... |.   .---...+..++..|.+.||+|+|....
T Consensus         4 ~~~m~~LilLGC-PE---~Pvq~p~~lYl~~~Lk~~G~~v~VA~np   45 (157)
T 1kjn_A            4 ESTGKALMVLGC-PE---SPVQIPLAIYTSHKLKKKGFRVTVTANP   45 (157)
T ss_dssp             --CCEEEEECCC-SC---STTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             ccceeeeEEecC-CC---CcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence            456898888654 32   2223445778999999999999998754

>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*

Probab=80.59  E-value=4.4  Score=35.25  Aligned_cols=40  Identities=18%  Similarity=0.277  Sum_probs=29.1

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP  127 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~  127 (465)
                      ||||+....       |=...-+..|+++|++.| +|+|+++......
T Consensus         1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg   40 (247)
T 1j9j_A            1 MRILVTNDD-------GIQSKGIIVLAELLSEEH-EVFVVAPDKERSA   40 (247)
T ss_dssp             CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred             CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence            788877654       112234788999999987 9999999875543

>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}

Probab=80.39  E-value=5.4  Score=34.80  Aligned_cols=51  Identities=14%  Similarity=0.105  Sum_probs=35.6

Q ss_pred             cccccCCCCCceeEEEEeCCCCCCCCCChHH-HHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           69 NKLCFGPTFEKLKLAVFSKTWPIGAAPGGME-RHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        69 ~~l~~~~~~~~mkIl~v~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      ..+...+.+.+|||++|..+    +..+|.. ..+..+++.+.+.|++|.++-...
T Consensus        24 ~~~~~~~~~~~mkIliI~GS----~r~~s~t~~La~~~~~~l~~~g~eve~idL~~   75 (247)
T 2q62_A           24 ASLRPAFSTHRPRILILYGS----LRTVSYSRLLAEEARRLLEFFGAEVKVFDPSG   75 (247)
T ss_dssp             GGGCCCCCCSCCEEEEEECC----CCSSCHHHHHHHHHHHHHHHTTCEEEECCCTT
T ss_pred             hhhhhhccCCCCeEEEEEcc----CCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhc
Confidence            34444556667899999986    2445544 556667888888899999887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	465
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	2e-17
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	2e-13
d2iw1a1	370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	6e-10
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	6e-07

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 81.8 bits (200), Expect = 2e-17
 Identities = 66/428 (15%), Positives = 124/428 (28%), Gaps = 78/428 (18%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQ-----------------GNLHV 138
           GG+    + +  ALA+ GHE+ VFT    R    ++ +                 GNL +
Sbjct: 16  GGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRI 75

Query: 139 H----------------------------FAANDHGSVNLNNDGAFDYVHTESVSLPHWR 170
           +                             A+    +  L  +   D VH          
Sbjct: 76  YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAG 135

Query: 171 A----KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF 226
           A            T H +    + +  F E   ++               P +  E    
Sbjct: 136 ALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-----------APYPDIDPEHTGG 184

Query: 227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD------PEAGVRFPEKL 280
              +    +S          ++  +  +  + NG+D + +          E       K 
Sbjct: 185 YIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKF 244

Query: 281 GVPANVSLVMGVAGRLVRDKGHPLL--YEAFSSITRDHPGVYLLVAGTGPWG-----RRY 333
           G+   V+ +  +       KG  +L       S  ++   +  ++ G G        R  
Sbjct: 245 GMDEGVTFMF-IGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSL 303

Query: 334 AELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI 393
            E   NVKV+  + + +          FV      +   L  +EAM  G   +      +
Sbjct: 304 EEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL 363

Query: 394 VRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASA 452
               ++  E G      +      A+   +      L +    CK+ A+S F+  K A  
Sbjct: 364 RD--IITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FSWEKSAER 420

Query: 453 YERFFLRM 460
           Y + +   
Sbjct: 421 YVKAYTGS 428

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 69.7 bits (169), Expect = 2e-13
 Identities = 50/333 (15%), Positives = 98/333 (29%), Gaps = 43/333 (12%)

Query: 166 LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGEL------FSNQNGVLPGSMTELQEAMPRL 219
           + +     +P++    +  +     + +F +L      F  +       ++ L+  +   
Sbjct: 148 MRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTA 207

Query: 220 VDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV------------ 267
                   SY + I ++      L  +       +H I+NG+D   +             
Sbjct: 208 TALSTVSPSYAEEI-LTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYS 266

Query: 268 -----HDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLL 322
                +         E   +  + S +  V  RL   KG  L+ EA   I      + +L
Sbjct: 267 AANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL 326

Query: 323 VAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA 378
            AG                  V V                D  + P+ R +   LT + A
Sbjct: 327 GAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPS-RFEPCGLTQLYA 385

Query: 379 MHCGRTVLTPNYPSIVRTV--------VVNEELGYTFSP-NVKSFVEALELVIRDG--PK 427
           +  G   +      +  TV              G  FSP  +    +A+   +R    PK
Sbjct: 386 LRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPK 445

Query: 428 VLQRKGLACKEHALSMFTATKMASAYERFFLRM 460
           +  +      +      +  K A  Y   + ++
Sbjct: 446 LWTQMQKLGMKSD---VSWEKSAGLYAALYSQL 475

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

 Score = 58.4 bits (139), Expect = 6e-10
 Identities = 45/370 (12%), Positives = 95/370 (25%), Gaps = 25/370 (6%)

Query: 96  GGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAN---DHGSVNLNN 152
           GG++R    +   +AARGH + V+T   +           + V    N   +        
Sbjct: 13  GGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQ 72

Query: 153 DGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTEL 212
           +   ++     V         V   A   +          L+              +T  
Sbjct: 73  NHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLY-------------RLTSR 119

Query: 213 QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA 272
                             + + +++       K YQ       ++  G+   +   +   
Sbjct: 120 YRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIP 179

Query: 273 GVR--FPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG 330
             R  + +K G+    +L++ V     R      +    S          L V G     
Sbjct: 180 NSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPR 239

Query: 331 RRYA--ELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP 388
           +  A  E       +             A    +      +   + L+EA+  G  VLT 
Sbjct: 240 KFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTT 299

Query: 389 NYPSIVRTVVVNEELGYTFSP--NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA 446
                    + +   G   +   + +   E L   +     +        + +A +    
Sbjct: 300 AVCGY-AHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDL 356

Query: 447 TKMASAYERF 456
             +       
Sbjct: 357 YSLPEKAADI 366

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 49.1 bits (116), Expect = 6e-07
 Identities = 40/339 (11%), Positives = 85/339 (25%), Gaps = 50/339 (14%)

Query: 152 NDGAFDYVHT-ESVSLPHWRAKMVPNVAV--TWHGIW--YEVMHSKLFGELFSNQNGVLP 206
            D    ++H    +   H   K   N  +    H  +   E+ +           + +L 
Sbjct: 121 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN------ALPTYDTLLE 174

Query: 207 GSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKF 266
                         D + F    +    ++  +A+      +  +  V+ I     E   
Sbjct: 175 QLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAK 234

Query: 267 VHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP---GVYLLV 323
                   +  +      NV  +  V  RL   KG P  + A+ ++   +P   G     
Sbjct: 235 QAAGPLPPKLAQLKAELKNVQNIFSV-ERLDYSKGLPERFLAYEALLEKYPQHHGKIRYT 293

Query: 324 AGTGPWGRRYAE-----------------------LGQNVKVLGALEAHQLSEFYNALDV 360
                                                    +    +   L + +   DV
Sbjct: 294 QIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDV 353

Query: 361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIV---RTVVVNEEL--GYTFSP-NVKSF 414
            +   LR  G++L   E +        P  P ++   +      EL      +P +    
Sbjct: 354 GLVTPLR-DGMNLVAKEYVAAQ----DPANPGVLVLSQFAGAANELTSALIVNPYDRDEV 408

Query: 415 VEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY 453
             AL+  +         +     +  +           +
Sbjct: 409 AAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECF 446

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	465
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.95
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.93
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.93
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.29
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.18
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	99.18
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	99.1
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.08
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	98.99
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	98.86
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	98.65
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	98.49
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	98.49
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	98.25
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	97.87
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	97.53
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	97.5
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	96.73
d1gsaa1	122	Prokaryotic glutathione synthetase, N-terminal dom	88.73
d1j9ja_	247	SurE homolog TM1662 {Thermotoga maritima [TaxId: 2	88.61
d1ydga_	201	Trp repressor binding protein WrbA {Deinococcus ra	87.48
d2d1pa1	128	tRNA 2-thiouridine synthesizing protein D, TusD {E	87.37
d2hy5a1	130	Sulfurtransferase DsrE {Chromatium vinosum [TaxId:	86.48
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	86.21
d1uana_	227	Hypothetical protein TT1542 {Thermus thermophilus	85.73
d1l5xa_	276	SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyroba	84.25
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	82.0
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	81.58

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=5.4e-44  Score=354.49  Aligned_cols=370  Identities=19%  Similarity=0.192  Sum_probs=255.0

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCC----------------CCC-----cccCCcceE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRK----------------PHN-----DVHQGNLHV  138 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~----------------~~~-----~~~~~~~~v  138 (465)
                      |||++|+.++++....||.+.++..|+++|+++||+|+|+++.....                ...     ........+
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   80 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence            89999998875433579999999999999999999999998642110                000     000111111


Q ss_pred             EEeec-----C-CCc------ccc---------------------CCCCCCcEEEecCCc---hhHHh----hhcCCcEE
Q 044542          139 HFAAN-----D-HGS------VNL---------------------NNDGAFDYVHTESVS---LPHWR----AKMVPNVA  178 (465)
Q Consensus       139 ~~~~~-----~-~~~------~~~---------------------~~~~~~DiI~~~~~~---~~~~~----~~~~p~~v  178 (465)
                      .+...     . ...      ..+                     ....+|||||+|++.   ....+    ..++| ++
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip-~V  159 (477)
T d1rzua_          81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL  159 (477)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred             EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCC-EE
Confidence            11100     0 000      000                     045689999999741   11111    12467 99


Q ss_pred             EEecchhHHHH-hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH---------hC
Q 044542          179 VTWHGIWYEVM-HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI---------YQ  248 (465)
Q Consensus       179 ~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---------~~  248 (465)
                      .++|+...... .......+.....  .......  ........++..+..+|.++++|...++.....         ..
T Consensus       160 ~t~H~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~  235 (477)
T d1rzua_         160 LTIHNIAFQGQFGANIFSKLALPAH--AFGMEGI--EYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIG  235 (477)
T ss_dssp             EEESCTTCCCEECGGGGGGSCCCGG--GSSTTTT--EETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHH
T ss_pred             EEEecccccccCCHHHHHHhhcchh--hcccccc--cccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhh
Confidence            99998643211 0111111100000  0000000  000000111244678999999998876654321         11


Q ss_pred             CCCCCEEEecCCCCCCCccCCccc-----------------CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHH
Q 044542          249 LPQRNVHVILNGVDETKFVHDPEA-----------------GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSS  311 (465)
Q Consensus       249 ~~~~ki~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~  311 (465)
                      ....++.+|+||+|.+.|.|....                 ...++...++++++..+|+++||+.++||++.+++|+.+
T Consensus       236 ~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~  315 (477)
T d1rzua_         236 SRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDE  315 (477)
T ss_dssp             TTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHH
T ss_pred             hccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHH
Confidence            234689999999999988764321                 122445567766666788899999999999999999999


Q ss_pred             hhhcCCCeEEEEEeCCcchhHH------HHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeE
Q 044542          312 ITRDHPGVYLLVAGTGPWGRRY------AELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTV  385 (465)
Q Consensus       312 l~~~~~~~~l~ivG~g~~~~~~------~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~Pv  385 (465)
                      +.+.  +.+++++|.|+.....      .++.++|.+.|..+.+++..+|++||++|+||.+ |+||++++|||+||+||
T Consensus       316 ~~~~--~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~-E~fglv~lEAma~G~Pv  392 (477)
T d1rzua_         316 IVSL--GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRF-EPCGLTQLYALRYGCIP  392 (477)
T ss_dssp             HHHT--TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTCEE
T ss_pred             HHhh--CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCccc-cCCCHHHHHHHHcCCCE
Confidence            8775  6788999987654322      2234899999999989999999999999999987 99999999999999999


Q ss_pred             EecCCCCcceeeeeeCC---------ceEEeCC-CHHHHHHHHHHHHh---CChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542          386 LTPNYPSIVRTVVVNEE---------LGYTFSP-NVKSFVEALELVIR---DGPKVLQRKGLACKEHALSMFTATKMASA  452 (465)
Q Consensus       386 I~s~~gg~~~e~v~~~~---------~G~l~~~-d~~~la~~i~~ll~---~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  452 (465)
                      |+|+.||++ |++.+++         +|+++++ |+++|+++|.++++   + ++.+++|++++   ++++|||++++++
T Consensus       393 Vas~~GG~~-E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~-~~~~~~~~~~a---~~~~fsw~~~a~~  467 (477)
T d1rzua_         393 VVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLG---MKSDVSWEKSAGL  467 (477)
T ss_dssp             EEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHH---HTCCCBHHHHHHH
T ss_pred             EEcCCCCCc-ceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCC-HHHHHHHHHHH---HHhhCCHHHHHHH
Confidence            999999999 8888764         8999999 99999999998876   5 88888888776   3567999999999


Q ss_pred             HHHHHHHhcC
Q 044542          453 YERFFLRMKN  462 (465)
Q Consensus       453 ~~~~~~~~~~  462 (465)
                      |+++|+++++
T Consensus       468 ~~~lY~~ll~  477 (477)
T d1rzua_         468 YAALYSQLIS  477 (477)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHHhC
Confidence            9999999874

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=9.7e-43  Score=341.73  Aligned_cols=365  Identities=19%  Similarity=0.238  Sum_probs=263.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcc---cC--------------CcceEEEee
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDV---HQ--------------GNLHVHFAA  142 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~---~~--------------~~~~v~~~~  142 (465)
                      ||||+++..||| ...||+++++..|+++|+++||+|+|+++..........   ..              ....+....
T Consensus         1 MkIl~~~~~~pP-~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (437)
T d2bisa1           1 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG   79 (437)
T ss_dssp             CEEEEECSCCTT-CCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEE
T ss_pred             CEEEEECCccCC-cccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecC
Confidence            899999999975 246999999999999999999999999976544332211   00              111111111


Q ss_pred             cC----CCccc-----------------------cC-CCCCCcEEEecCCchhH---H--hhhcCCcEEEEecchhHHHH
Q 044542          143 ND----HGSVN-----------------------LN-NDGAFDYVHTESVSLPH---W--RAKMVPNVAVTWHGIWYEVM  189 (465)
Q Consensus       143 ~~----~~~~~-----------------------~~-~~~~~DiI~~~~~~~~~---~--~~~~~p~~v~~~h~~~~~~~  189 (465)
                      ..    ...+.                       .. ....||+||+|++....   .  ...++| +++++|+......
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~  158 (437)
T d2bisa1          80 GGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKSKL  158 (437)
T ss_dssp             SSGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHHCCC-EEEEESSCCCCCE
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhccccCc-eeEEEeecccccc
Confidence            00    00000                       00 35568999999763221   1  123567 9999999753221


Q ss_pred             hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCC
Q 044542          190 HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHD  269 (465)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~  269 (465)
                      ....+..... .         .... ......+......+|.+++.+..........++.+..++.++|||+|.+.+.+.
T Consensus       159 ~~~~~~~~~~-~---------~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~  227 (437)
T d2bisa1         159 PAFYFHEAGL-S---------ELAP-YPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNES  227 (437)
T ss_dssp             EHHHHHHTTC-G---------GGCC-SSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGG
T ss_pred             chhhhhhccc-h---------hhhh-HHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEeccccccccccc
Confidence            1111111100 0         0000 000011124456789999999988887777777778999999999999887653


Q ss_pred             ccc------CcccccccCCCCCCcEEEEEeecccc-ccCHHHHHHHHHHhhhc--CCCeEEEEEeCCcchh--HHHHh--
Q 044542          270 PEA------GVRFPEKLGVPANVSLVMGVAGRLVR-DKGHPLLYEAFSSITRD--HPGVYLLVAGTGPWGR--RYAEL--  336 (465)
Q Consensus       270 ~~~------~~~~r~~~g~~~~~~~~l~~~Grl~~-~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~g~~~~--~~~~l--  336 (465)
                      ...      ...+++++++.++  .+++++|++.. .||++.+++|+..+..+  .++++|+++|.|+...  ..+.+  
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~  305 (437)
T d2bisa1         228 YLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEE  305 (437)
T ss_dssp             GCCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHH
T ss_pred             ccchhhHHHHHhhhhhhhccCC--ceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhcc
Confidence            221      2235566666543  66779999965 79999999999988543  4789999999886432  22222  


Q ss_pred             --cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHH
Q 044542          337 --GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKS  413 (465)
Q Consensus       337 --~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~  413 (465)
                        .+.+.+.|.++.+++..+++.||++++||.. |++|++++|||+||+|||+++.||.. |++.+ ++|+++++ |+++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~-e~~~~~~~Eama~G~Pvi~~~~g~~~-e~i~~-~~G~~~~~~d~~~  382 (437)
T d2bisa1         306 KHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DIITN-ETGILVKAGDPGE  382 (437)
T ss_dssp             TCTTEEEECSCCCHHHHHHHHTTCSEEEECCSC-CSSCHHHHHHHTTTCEEEEESCTTHH-HHCCT-TTCEEECTTCHHH
T ss_pred             ccccceeccccCcHHHHHHHHhhhccccccccc-cccchHHHHHHHCCCCEEEeCCCCcH-HhEEC-CcEEEECCCCHHH
Confidence              2677888999999999999999999999975 99999999999999999999999998 77654 68999999 9999


Q ss_pred             HHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542          414 FVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP  463 (465)
Q Consensus       414 la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  463 (465)
                      ++++|.+++.++++.++++++++++.+++ |||++++++|+++|++++++
T Consensus       383 la~~i~~ll~~~~~~~~~~~~~~~~~~~~-~s~~~~a~~~~~iY~~~i~r  431 (437)
T d2bisa1         383 LANAILKALELSRSDLSKFRENCKKRAMS-FSWEKSAERYVKAYTGSIDR  431 (437)
T ss_dssp             HHHHHHHHHTTTTSCTHHHHHHHHHHHHH-SCHHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHh
Confidence            99999999985578899999999999865 99999999999999998865

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-40  Score=317.08  Aligned_cols=345  Identities=16%  Similarity=0.167  Sum_probs=245.5

Q ss_pred             EEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCC-cc-----------c
Q 044542           82 LAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHG-SV-----------N  149 (465)
Q Consensus        82 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~-----------~  149 (465)
                      |++++..|.   ..||+++++..++++|+++||+|+|+|.........    . ..+...+.... ..           .
T Consensus         2 i~f~~~~y~---p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (370)
T d2iw1a1           2 VAFCLYKYF---PFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPK----A-FELIQVPVKSHTNHGRNAEYYAWVQN   73 (370)
T ss_dssp             EEEECSEEC---TTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCT----T-CEEEECCCCCSSHHHHHHHHHHHHHH
T ss_pred             EEEEecCCC---CCCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCCCC----c-eEEEEcCccccccchhhHHHHHHHHH
Confidence            788887663   259999999999999999999999999764332211    1 11222211110 00           0


Q ss_pred             cCCCCCCcEEEecCCchhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhccc
Q 044542          150 LNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSY  229 (465)
Q Consensus       150 ~~~~~~~DiI~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (465)
                      ..+..++|+||.+......        .+...++...............+.        . ..................+
T Consensus        74 ~~~~~~~d~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~  136 (370)
T d2iw1a1          74 HLKEHPADRVVGFNKMPGL--------DVYFAADVCYAEKVAQEKGFLYRL--------T-SRYRHYAAFERATFEQGKS  136 (370)
T ss_dssp             HHHHSCCSEEEESSCCTTC--------SEEECCSCCHHHHHHHHCCHHHHT--------S-HHHHHHHHHHHHHHSTTCC
T ss_pred             HHHhcccceeeecccCchH--------HHHHHhhcccceeeeeecCccccc--------c-chhchhHHHHHHHHhhccC
Confidence            0156789999887642211        111111111100000000000000        0 0000111111111223467


Q ss_pred             CEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccC--CcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHH
Q 044542          230 NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH--DPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYE  307 (465)
Q Consensus       230 d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~--~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~  307 (465)
                      +.+++.++...+.+.+.++.+.+++.++|||+|.+.+.+  .+..+..+|+.+|++++. .+++++||+.+.||++.+++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~~gr~~~~Kg~~~li~  215 (370)
T d2iw1a1         137 TKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-NLLLQVGSDFGRKGVDRSIE  215 (370)
T ss_dssp             CEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-EEEEEECSCTTTTTHHHHHH
T ss_pred             ceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccc-eEEEEEeccccccchhhhcc
Confidence            889999999999988889999999999999999876543  333445678888988777 77779999999999999999


Q ss_pred             HHHHhhhcCCCeEEEEEeCCcchhHHHH----hc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHc
Q 044542          308 AFSSITRDHPGVYLLVAGTGPWGRRYAE----LG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHC  381 (465)
Q Consensus       308 a~~~l~~~~~~~~l~ivG~g~~~~~~~~----l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~  381 (465)
                      |++++.+++++..+.++|.++..+.+++    ++  ++++++|+.  +++.++|+.||++++||.+ ||+|++++|||+|
T Consensus       216 a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~~-E~~~~~~~EAma~  292 (370)
T d2iw1a1         216 ALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQ-EAAGIVLLEAITA  292 (370)
T ss_dssp             HHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSC-CSSCHHHHHHHHH
T ss_pred             cccccccccccceeeeccccccccccccccccccccccccccccc--ccccccccccccccccccc-ccccceeeecccC
Confidence            9999988777777777776555444433    33  799999986  6899999999999999975 9999999999999


Q ss_pred             CCeEEecCCCCcceeeeeeCCceEEe-CC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          382 GRTVLTPNYPSIVRTVVVNEELGYTF-SP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       382 G~PvI~s~~gg~~~e~v~~~~~G~l~-~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                      |+|||+|+.||.+ |++.++.+|+++ ++ |+++++++|.++++| ++.+++|+++|++++++ |++..+.+++.++|+
T Consensus       293 G~PvI~s~~~g~~-e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~-~~~~~~~~~~~~ii~  368 (370)
T d2iw1a1         293 GLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLPEKAADIIT  368 (370)
T ss_dssp             TCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH-SCCSCHHHHHHHHHH
T ss_pred             CeeEEEeCCCChH-HHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH-hChhHHHHHHHHHHh
Confidence            9999999999998 899999999766 56 999999999999999 99999999999999976 677777777777765

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.95  E-value=6.6e-28  Score=208.52  Aligned_cols=180  Identities=18%  Similarity=0.279  Sum_probs=149.9

Q ss_pred             CCCCCCccCCcc------cCcccccccCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHhhhc--CCCeEEEEEeCCcch
Q 044542          260 GVDETKFVHDPE------AGVRFPEKLGVPANVSLVMGVAGRLV-RDKGHPLLYEAFSSITRD--HPGVYLLVAGTGPWG  330 (465)
Q Consensus       260 gvd~~~~~~~~~------~~~~~r~~~g~~~~~~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~g~~~  330 (465)
                      |||.+.|.+...      .+..+++++|++++  .+++|+||+. ++||++.+++|++.+.++  +++++|+++|.|+..
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~   78 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE   78 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH
T ss_pred             CcChhhcCCCCCCchhHHHHHHHHHHhCCCCC--CEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccc
Confidence            789988876432      23457788999644  4567999996 589999999999998653  478999999987543


Q ss_pred             --hHHHH----hcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCce
Q 044542          331 --RRYAE----LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELG  404 (465)
Q Consensus       331 --~~~~~----l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G  404 (465)
                        ...+.    +...+.+.|.++.+++..+|+.||++|+||.. |++|++++|||+||+|||+++.++.. +++. +.+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~-e~~~~~~~Eam~~G~pvI~~~~~~~~-e~i~-~~~g  155 (196)
T d2bfwa1          79 LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DIIT-NETG  155 (196)
T ss_dssp             HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSC-CSSCHHHHHHHHTTCEEEEESCHHHH-HHCC-TTTC
T ss_pred             hhhhhhhhhhccceeEEeeeccccccchhcccccccccccccc-ccccccchhhhhcCceeeecCCCccc-eeec-CCce
Confidence              22222    23667788999999999999999999999975 99999999999999999999999998 7664 5689


Q ss_pred             EEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCC
Q 044542          405 YTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT  445 (465)
Q Consensus       405 ~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  445 (465)
                      +++++ |+++++++|.+++..+++.+++++++|++++++ ||
T Consensus       156 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs  196 (196)
T d2bfwa1         156 ILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FS  196 (196)
T ss_dssp             EEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred             eeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence            99999 999999999999985588999999999999876 76

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=5e-26  Score=190.93  Aligned_cols=131  Identities=24%  Similarity=0.391  Sum_probs=115.6

Q ss_pred             EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchh----H---HHHh-cCCeEEcCCCChhHHHHHHHhcC
Q 044542          288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGR----R---YAEL-GQNVKVLGALEAHQLSEFYNALD  359 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~----~---~~~l-~~~V~~~g~v~~~~~~~~~~~aD  359 (465)
                      +.+ |+||+.++||++.+++|++++    ++.+++++|.+...+    .   +++. .++|+|+|+++.+++.++|+.||
T Consensus        14 ~~l-~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad   88 (166)
T d2f9fa1          14 FWL-SVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK   88 (166)
T ss_dssp             CEE-EECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred             EEE-EEecCccccCHHHHHHHHHHh----cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccc
Confidence            544 999999999999999999988    567899999754322    1   2222 28999999999999999999999


Q ss_pred             eEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCC
Q 044542          360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDG  425 (465)
Q Consensus       360 v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~  425 (465)
                      ++++||.. |++|++++|||++|+|||+++.++.. +++.++.+|+++++|+++++++|.++++++
T Consensus        89 ~~i~ps~~-e~~~~~~~Ea~~~g~pvi~s~~~~~~-e~i~~~~~g~~~~~d~~~~~~~i~~l~~~~  152 (166)
T d2f9fa1          89 GLLCTAKD-EDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLVNADVNEIIDAMKKVSKNP  152 (166)
T ss_dssp             EEEECCSS-CCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEECSCHHHHHHHHHHHHHCT
T ss_pred             cccccccc-ccccccccccccccccceeecCCcce-eeecCCcccccCCCCHHHHHHHHHHHHhCH
Confidence            99999975 99999999999999999999999998 889999999988779999999999999994

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=4.2e-25  Score=214.52  Aligned_cols=277  Identities=12%  Similarity=0.128  Sum_probs=201.3

Q ss_pred             CCCcEEEecCCc---hhHHhhhcCC--cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcc
Q 044542          154 GAFDYVHTESVS---LPHWRAKMVP--NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSS  228 (465)
Q Consensus       154 ~~~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (465)
                      ..-|+|++|++.   ++..+....|  ++.+.+|..++.   .+.+..+             .   ....++   ..+-.
T Consensus       121 ~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~---~~~fr~l-------------p---~~~~il---~~ll~  178 (456)
T d1uqta_         121 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT---PEIFNAL-------------P---TYDTLL---EQLCD  178 (456)
T ss_dssp             CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCC---HHHHTTS-------------T---THHHHH---HHHTT
T ss_pred             cCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCC---hHHhccC-------------c---chHHHH---HHhhc
Confidence            344899999863   3444444333  288888875432   1111111             0   001111   33457


Q ss_pred             cCEEEEeChhHHHHHHHH----hCC------------CCCCEEEecCCCCCCCccCCccc-----CcccccccCCCCCCc
Q 044542          229 YNQHICISNSAAEVLVKI----YQL------------PQRNVHVILNGVDETKFVHDPEA-----GVRFPEKLGVPANVS  287 (465)
Q Consensus       229 ~d~ii~~S~~~~~~~~~~----~~~------------~~~ki~vi~ngvd~~~~~~~~~~-----~~~~r~~~g~~~~~~  287 (465)
                      +|.|...+...++.+.+.    .+.            ...++.++|+|+|.+.|......     ..+++.++   .+. 
T Consensus       179 ~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~---~~~-  254 (456)
T d1uqta_         179 YDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL---KNV-  254 (456)
T ss_dssp             SSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT---TTC-
T ss_pred             cccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhc---CCC-
Confidence            888888887776666432    111            12368899999999877542211     11222222   233 


Q ss_pred             EEEEEeeccccccCHHHHHHHHHHhhhcCCC----eEEEEEeCCcch---------hHHHHh-------------cCCeE
Q 044542          288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYLLVAGTGPWG---------RRYAEL-------------GQNVK  341 (465)
Q Consensus       288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g~~~---------~~~~~l-------------~~~V~  341 (465)
                      .+++++||+.+.||++.+++|++++.+++|+    +.++.+|.+...         .++.++             .+.+.
T Consensus       255 ~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~  334 (456)
T d1uqta_         255 QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYY  334 (456)
T ss_dssp             EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEE
T ss_pred             eEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceee
Confidence            6777999999999999999999999888775    667777754321         111111             16688


Q ss_pred             EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe-----EEecCCCCcceeeeeeCCceEEeCC-CHHHHH
Q 044542          342 VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT-----VLTPNYPSIVRTVVVNEELGYTFSP-NVKSFV  415 (465)
Q Consensus       342 ~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P-----vI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la  415 (465)
                      +.+.++.+++..+|+.||++++||.+ ||||++.+|||+||+|     +|+|+.+|.. +.+.   .|++++| |++++|
T Consensus       335 ~~~~~~~~~l~a~~~~Adv~v~~s~~-EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~-~~l~---~g~lVnP~d~~~~A  409 (456)
T d1uqta_         335 LNQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NELT---SALIVNPYDRDEVA  409 (456)
T ss_dssp             ECSCCCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHHHHSCTTSCCEEEEETTBGGG-GTCT---TSEEECTTCHHHHH
T ss_pred             ccCCcCHHHHhHHHhhhceeecCCcc-CCCCcHHHHHHHhCCCCCCCcEEEeCCCCCH-HHhC---CeEEECcCCHHHHH
Confidence            99999999999999999999999987 9999999999999998     9999999998 5553   4899999 999999


Q ss_pred             HHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542          416 EALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN  462 (465)
Q Consensus       416 ~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  462 (465)
                      ++|.+++.+++++++++.+++++++.+ |+++..++.+++-++++..
T Consensus       410 ~ai~~aL~~~~~er~~~~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~  455 (456)
T d1uqta_         410 AALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECFISDLKQIVP  455 (456)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHhhcC
Confidence            999999998788999999999999987 8999999999999888653

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.29  E-value=8.7e-11  Score=109.19  Aligned_cols=110  Identities=15%  Similarity=0.118  Sum_probs=80.6

Q ss_pred             CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce------eeeeeCCceEEeCC--
Q 044542          338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR------TVVVNEELGYTFSP--  409 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~------e~v~~~~~G~l~~~--  409 (465)
                      .++...++.  +++.++|+.||++|..     +-+.++.||+++|+|+|....+...+      +.+.+.+.|+.++.  
T Consensus       231 ~~~~v~~f~--~~~~~lm~~adl~It~-----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~  303 (351)
T d1f0ka_         231 PQHKVTEFI--DDMAAAYAWADVVVCR-----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ  303 (351)
T ss_dssp             TTSEEESCC--SCHHHHHHHCSEEEEC-----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGG
T ss_pred             ccceeeeeh--hhHHHHHHhCchhhcc-----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhh
Confidence            788899998  6899999999999962     33479999999999999876542211      24556678888864  


Q ss_pred             -CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542          410 -NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFL  458 (465)
Q Consensus       410 -d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  458 (465)
                       +.+.+.++|..+  + ++.+.+|++++++.... ...+.+++.++++-+
T Consensus       304 ~~~e~l~~~l~~l--~-~~~~~~~~~~~~~~~~~-~~a~~i~~~i~~l~~  349 (351)
T d1f0ka_         304 LSVDAVANTLAGW--S-RETLLTMAERARAASIP-DATERVANEVSRVAR  349 (351)
T ss_dssp             CCHHHHHHHHHTC--C-HHHHHHHHHHHHHTCCT-THHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHhh--C-HHHHHHHHHHHHccCCc-cHHHHHHHHHHHHHh
Confidence             578888888775  4 67788899888876444 356666666666543

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.18  E-value=4.7e-11  Score=113.09  Aligned_cols=80  Identities=14%  Similarity=0.160  Sum_probs=63.9

Q ss_pred             HhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC-
Q 044542          335 ELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP-  409 (465)
Q Consensus       335 ~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~-  409 (465)
                      .+.++|.+.+++|+.   .++..+|++|.     .|-..++.||+++|+|+|+....+    .. ..+++.+.|..++. 
T Consensus       283 ~~~~~v~~~~~~p~~---~ll~~~~~~I~-----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na-~~v~~~G~g~~l~~~  353 (401)
T d1rrva_         283 DDRDDCFAIDEVNFQ---ALFRRVAAVIH-----HGSAGTEHVATRAGVPQLVIPRNTDQPYFA-GRVAALGIGVAHDGP  353 (401)
T ss_dssp             CCCTTEEEESSCCHH---HHGGGSSEEEE-----CCCHHHHHHHHHHTCCEEECCCSBTHHHHH-HHHHHHTSEEECSSS
T ss_pred             cCCCCEEEEeccCcH---HHhhhccEEEe-----cCCchHHHHHHHhCCCEEEecccccHHHHH-HHHHHCCCEEEcCcC
Confidence            445899999999754   45678999996     345679999999999999987765    22 34566678998876 


Q ss_pred             --CHHHHHHHHHHHHh
Q 044542          410 --NVKSFVEALELVIR  423 (465)
Q Consensus       410 --d~~~la~~i~~ll~  423 (465)
                        ++++|+++|.++++
T Consensus       354 ~~~~~~L~~ai~~vl~  369 (401)
T d1rrva_         354 TPTFESLSAALTTVLA  369 (401)
T ss_dssp             CCCHHHHHHHHHHHTS
T ss_pred             CCCHHHHHHHHHHHhC
Confidence              68999999999984

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.18  E-value=1.5e-09  Score=101.35  Aligned_cols=311  Identities=13%  Similarity=0.045  Sum_probs=171.6

Q ss_pred             CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCc-ccC--CcceEEEeecCC-Cccc---
Q 044542           78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHND-VHQ--GNLHVHFAANDH-GSVN---  149 (465)
Q Consensus        78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~-~~~--~~~~v~~~~~~~-~~~~---  149 (465)
                      ++|||++|+..=|       --.-+..+.++|.+. +.++.++....+...... ...  ..+.+....... ....   
T Consensus         1 ~k~Ki~~v~GtR~-------e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   73 (377)
T d1o6ca_           1 KKLKVMTVFGTRP-------EAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEIT   73 (377)
T ss_dssp             CCEEEEEEECSHH-------HHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHH
T ss_pred             CCceEEEEEEchH-------hHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCCceeeecCCCCCCHHHHH
Confidence            4799999986421       122356788999876 679988887764321111 111  111222211111 1100   


Q ss_pred             ---------cCCCCCCcEEEecCCc---hhH---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCc-hhhhh
Q 044542          150 ---------LNNDGAFDYVHTESVS---LPH---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGS-MTELQ  213 (465)
Q Consensus       150 ---------~~~~~~~DiI~~~~~~---~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  213 (465)
                               ...+.+||+|++++..   ++.   ....++|  +..+|+-.                  .+... .....
T Consensus        74 ~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ip--i~HiegG~------------------~s~~~~~~~~d  133 (377)
T d1o6ca_          74 SNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIA--VGHVEAGL------------------RTGNKYSPFPE  133 (377)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE--EEEESCCC------------------CCSCTTTTTTH
T ss_pred             HHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccce--EEEEeccc------------------ccccccccCch
Confidence                     0067889999998752   222   2234566  45555411                  00000 00111


Q ss_pred             hhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEE
Q 044542          214 EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGV  292 (465)
Q Consensus       214 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~  292 (465)
                      ...+...     -+-+|..++.++..++.+.+ .|.++.++.++.+.. |.-.......   .....+....+++++++.
T Consensus       134 e~~R~~i-----skls~~hf~~t~~~~~~L~~-~G~~~~~I~~vG~~~~D~i~~~~~~~---~~~~~~~~~~~~~~ilvt  204 (377)
T d1o6ca_         134 ELNRQMT-----GAIADLHFAPTGQAKDNLLK-ENKKADSIFVTGNTAIDALNTTVRDG---YSHPVLDQVGEDKMILLT  204 (377)
T ss_dssp             HHHHHHH-----HHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSS---CCCSTTTTTTTSEEEEEC
T ss_pred             hhhcccc-----ccceeEEeecchhhhhhhhh-hccccceEeeccchhHHHHHHHHHHH---HhhhhhhhccCCceEEEE
Confidence            1222211     24578889999999999988 799999999998863 3211111111   111112222244466666


Q ss_pred             eeccccc-cCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--hHHHH-hc--CCeEEcCCCChhHHHHHHHhcCeEEeccc
Q 044542          293 AGRLVRD-KGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--RRYAE-LG--QNVKVLGALEAHQLSEFYNALDVFVNPTL  366 (465)
Q Consensus       293 ~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--~~~~~-l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~  366 (465)
                      .-|.... +.....+.++..+.....++.+++.......  ....+ +.  +++.++..+++.+...+++.|++++--| 
T Consensus       205 ~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-  283 (377)
T d1o6ca_         205 AHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-  283 (377)
T ss_dssp             C----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--
T ss_pred             eccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeeccc-
Confidence            6665442 3334455555555555566666554432221  12222 22  8999999999999999999999998644 


Q ss_pred             CCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHH
Q 044542          367 RPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRK  432 (465)
Q Consensus       367 ~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~  432 (465)
                           |..+.||-.+|+|+|.-....-+.+.+..+ +-.+++.|.+++.+++.+++.+ +..++.+
T Consensus       284 -----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~~~~~I~~~i~~~l~~-~~~~~~~  342 (377)
T d1o6ca_         284 -----GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGTDEENIYQLAKQLLTD-PDEYKKM  342 (377)
T ss_dssp             ------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECSCHHHHHHHHHHHHHC-HHHHHHH
T ss_pred             -----chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECCCCHHHHHHHHHHHHhC-hHHHhhh
Confidence                 226889999999999775433343444434 4566766999999999999998 6555443

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=99.10  E-value=9.3e-10  Score=102.65  Aligned_cols=307  Identities=13%  Similarity=0.030  Sum_probs=184.5

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCC-cccCCc--ceEEEeecCC-Ccc-c----
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHN-DVHQGN--LHVHFAANDH-GSV-N----  149 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~-~~~~~~--~~v~~~~~~~-~~~-~----  149 (465)
                      .||++++..=|       --..+..+.++|.+. ++++.++....+..... .....+  +......... ... .    
T Consensus         3 kkI~~v~GtR~-------e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~   75 (373)
T d1v4va_           3 KRVVLAFGTRP-------EATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAAR   75 (373)
T ss_dssp             EEEEEEECSHH-------HHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHH
T ss_pred             CeEEEEEEhhH-------HHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCccccCCCCCCCCCHHHHHHH
Confidence            48999986421       122466788999874 78999888776522111 111111  1111111111 110 0    


Q ss_pred             -------cCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecc-hhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542          150 -------LNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHG-IWYEVMHSKLFGELFSNQNGVLPGSMTELQEA  215 (465)
Q Consensus       150 -------~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (465)
                             ...+.+||+|++++-.   ++   +....++|  +..+++ ....               ....+   .....
T Consensus        76 ~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ip--i~HiegG~rsg---------------~~~~~---~~de~  135 (373)
T d1v4va_          76 ILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP--VGHVEAGLRSG---------------NLKEP---FPEEA  135 (373)
T ss_dssp             HHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC--EEEETCCCCCS---------------CTTSS---TTHHH
T ss_pred             HHHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhh--heeeccccccc---------------ccccC---cchhh
Confidence                   0067899999998642   22   22334677  444444 1100               00000   11111


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG  294 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G  294 (465)
                      .+.     ..-+-++..++.++..++.+.+ .|.++.++.++.++. |.  +....   ...+.....+. ++++++...
T Consensus       136 ~R~-----~iskls~~hf~~t~~~~~~L~~-~Ge~~~~I~~vG~p~~D~--i~~~~---~~~~~~~~~~~-~~~~lvt~h  203 (373)
T d1v4va_         136 NRR-----LTDVLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDA--VLLAA---KLGRLPEGLPE-GPYVTVTMH  203 (373)
T ss_dssp             HHH-----HHHHHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHH--HHHHH---HHCCCCTTCCS-SCEEEECCC
T ss_pred             hhh-----hhccccceeeecchhhhhhhhh-hcccccceeecccchhhH--HHhhh---hhccccccccc-ccceeEEec
Confidence            111     1224578889999999999988 799999999998753 21  11100   01111222233 347777778


Q ss_pred             ccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--hHH-HHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542          295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--RRY-AELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ  369 (465)
Q Consensus       295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--~~~-~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e  369 (465)
                      +....+....+.+++..+.+...++.+++.......  ... +.+.  +++.++..+++.+...+++.|++++--|    
T Consensus       204 r~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS----  279 (373)
T d1v4va_         204 RRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS----  279 (373)
T ss_dssp             CGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC----
T ss_pred             cccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEeccc----
Confidence            877777778888888888887777777665432221  111 2222  7999999999999999999999999644    


Q ss_pred             CCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHH
Q 044542          370 GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKG  433 (465)
Q Consensus       370 g~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~  433 (465)
                        |..+.||..+|+|+|.-+..+-+.+-+..+ .-.++..|.+++.+++.+++.+ ++.+..+.
T Consensus       280 --ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g-~nvlv~~d~~~I~~~i~~~l~~-~~~~~~~~  339 (373)
T d1v4va_         280 --GGLQEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAGTDPEGVYRVVKGLLEN-PEELSRMR  339 (373)
T ss_dssp             --HHHHHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECCSCHHHHHHHHHHHHTC-HHHHHHHH
T ss_pred             --chhhhcchhhcCcEEEeCCCccCHHHHhcC-eeEEcCCCHHHHHHHHHHHHcC-HHHHhhcc
Confidence              347889999999999874433343444444 3455555999999999999998 66665543

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.08  E-value=3.3e-10  Score=106.68  Aligned_cols=80  Identities=16%  Similarity=0.217  Sum_probs=63.1

Q ss_pred             hcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCc--------ceeeeeeCCceEEe
Q 044542          336 LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI--------VRTVVVNEELGYTF  407 (465)
Q Consensus       336 l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~--------~~e~v~~~~~G~l~  407 (465)
                      ..++|.+.|++|+.   .++..+|++|..+    | ..++.|||++|+|+|+....+-        . +.+.+.+.|+.+
T Consensus       268 ~~~~v~i~~~~p~~---~ll~~a~~~v~hg----G-~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA-~~l~~~G~g~~l  338 (391)
T d1pn3a_         268 DGADCFVVGEVNLQ---ELFGRVAAAIHHD----S-AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHA-DRVAELGVGVAV  338 (391)
T ss_dssp             CCTTCCEESSCCHH---HHHTTSSCEEEES----C-HHHHHHHHHHTCCEEEECSSCCBTTBCCHHH-HHHHHHTSEEEE
T ss_pred             CCCCEEEecccCHH---HHHhhccEEEecC----c-hHHHHHHHHhCCcEEEeccccCCcchHHHHH-HHHHHCCCEEEc
Confidence            34899999999754   5678999999754    2 3589999999999999876542        2 345566789888


Q ss_pred             CC---CHHHHHHHHHHHHhC
Q 044542          408 SP---NVKSFVEALELVIRD  424 (465)
Q Consensus       408 ~~---d~~~la~~i~~ll~~  424 (465)
                      +.   ++++|+++|.+++++
T Consensus       339 ~~~~~~~~~l~~~i~~~l~~  358 (391)
T d1pn3a_         339 DGPVPTIDSLSAALDTALAP  358 (391)
T ss_dssp             CCSSCCHHHHHHHHHHHTST
T ss_pred             CcCCCCHHHHHHHHHHHhCH
Confidence            76   589999999999964

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.99  E-value=9.7e-09  Score=95.53  Aligned_cols=334  Identities=14%  Similarity=0.072  Sum_probs=191.1

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCc-ccCC--cceEEEeecCCCc-c-c----
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHND-VHQG--NLHVHFAANDHGS-V-N----  149 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~-~~~~--~~~v~~~~~~~~~-~-~----  149 (465)
                      |||++|+..=|       --.-+..+.++|.+. +.++.++....+.....+ ....  .+.........+. . .    
T Consensus         1 MKi~~v~GtR~-------e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (376)
T d1f6da_           1 MKVLTVFGTRP-------EAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCR   73 (376)
T ss_dssp             CEEEEEECSHH-------HHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHH
T ss_pred             CeEEEEEEhhH-------hHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHH
Confidence            89999986421       123466788999776 689999987765321111 1111  1111111111111 0 0    


Q ss_pred             -------cCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCc-hhhhhhh
Q 044542          150 -------LNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGS-MTELQEA  215 (465)
Q Consensus       150 -------~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  215 (465)
                             ...+.+||+|++++-.   ++   .....++|  +..+|+-.                  .+... .......
T Consensus        74 ~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ip--i~HiegG~------------------~s~~~~~~~pde~  133 (376)
T d1f6da_          74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP--VGHVEAGL------------------RTGDLYSPWPEEA  133 (376)
T ss_dssp             HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC--EEEESCCC------------------CCSCTTSSTTHHH
T ss_pred             HHHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCce--EEEEeccc------------------ccccccccCchhh
Confidence                   0067889999998742   22   22334677  55556521                  00000 0011111


Q ss_pred             hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCC-----CccCCc-ccCcccccccCCCCCCcE
Q 044542          216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DET-----KFVHDP-EAGVRFPEKLGVPANVSL  288 (465)
Q Consensus       216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~-----~~~~~~-~~~~~~r~~~g~~~~~~~  288 (465)
                      .+..     .-+-++..++.++..++.+.+ .|..+.+++++.+.. |.-     ...... ...........+..++++
T Consensus       134 ~R~~-----iskls~~hf~~~~~~~~~L~~-~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (376)
T d1f6da_         134 NRTL-----TGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKM  207 (376)
T ss_dssp             HHHH-----HHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEE
T ss_pred             hhhh-----hccceeEEEeccHHHHhHHHh-cCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCce
Confidence            2111     125678888999999999988 799999999998853 310     000000 001112222333445557


Q ss_pred             EEEEeecccc-ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--hHHHH-hc--CCeEEcCCCChhHHHHHHHhcCeEE
Q 044542          289 VMGVAGRLVR-DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--RRYAE-LG--QNVKVLGALEAHQLSEFYNALDVFV  362 (465)
Q Consensus       289 ~l~~~Grl~~-~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--~~~~~-l~--~~V~~~g~v~~~~~~~~~~~aDv~v  362 (465)
                      +++..-|... .+....++.++..+.+...++.+++-......  ....+ +.  +++.++..+++.+...+++.|++++
T Consensus       208 ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vi  287 (376)
T d1f6da_         208 ILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLIL  287 (376)
T ss_dssp             EEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEE
T ss_pred             EEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEE
Confidence            7766555443 45567778888887777667776665432221  12222 22  8999999999999999999999999


Q ss_pred             ecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHh
Q 044542          363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALS  442 (465)
Q Consensus       363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~  442 (465)
                      --|.      ..+.||-.+|+|+|.-..+.-+.+.+..+ +-.++..|.+++.+++.+++++ +.....+     .....
T Consensus       288 gnSs------sgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~~~~~I~~ai~~~l~~-~~~~~~~-----~~~~n  354 (376)
T d1f6da_         288 TDSG------GIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGTDKQRIVEEVTRLLKD-ENEYQAM-----SRAHN  354 (376)
T ss_dssp             ESSS------GGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCSSHHHHHHHHHHHHHC-HHHHHHH-----HHSCC
T ss_pred             ecCc------chHhhHHHhCCCEEEcCCCccCccceecC-eeEECCCCHHHHHHHHHHHHhC-hHhhhhh-----ccCCC
Confidence            7552      26789999999999653332222334333 4556666999999999999988 5433222     11122


Q ss_pred             hCCHHHHHHHHHHHHHH
Q 044542          443 MFTATKMASAYERFFLR  459 (465)
Q Consensus       443 ~fs~~~~~~~~~~~~~~  459 (465)
                      -|.--+.++++.+++++
T Consensus       355 pYGdG~as~rI~~iLk~  371 (376)
T d1f6da_         355 PYGDGQACSRILEALKN  371 (376)
T ss_dssp             TTCCSCHHHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHh
Confidence            24434556666666654

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.86  E-value=4.4e-09  Score=98.91  Aligned_cols=122  Identities=14%  Similarity=0.110  Sum_probs=78.4

Q ss_pred             EEEEEeeccc-cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEeccc
Q 044542          288 LVMGVAGRLV-RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTL  366 (465)
Q Consensus       288 ~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~  366 (465)
                      .++...|... ..+..+.++++++.+    +...++..|...  .....+.+||++.+++|+.   .+|..+|++|.   
T Consensus       240 ~i~~~~~~~~~~~~~~~~~~~al~~~----~~~~~~~~~~~~--~~~~~~~~nv~~~~~~p~~---~~l~~~~~~V~---  307 (401)
T d1iira_         240 PVYLGFGSLGAPADAVRVAIDAIRAH----GRRVILSRGWAD--LVLPDDGADCFAIGEVNHQ---VLFGRVAAVIH---  307 (401)
T ss_dssp             CEEEECC---CCHHHHHHHHHHHHHT----TCCEEECTTCTT--CCCSSCGGGEEECSSCCHH---HHGGGSSEEEE---
T ss_pred             eEEEccCccccchHHHHHHHHHHHHc----CCeEEEeccCCc--cccccCCCCEEEEeccCHH---HHHhhcCEEEe---
Confidence            3433444433 234444555555554    222333333321  2222344899999999744   56788999995   


Q ss_pred             CCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhC
Q 044542          367 RPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRD  424 (465)
Q Consensus       367 ~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~  424 (465)
                        .|-..++.||+++|+|+|+....+    .. ..+++.+.|..++.   ++++|+++|.+++++
T Consensus       308 --hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na-~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~  369 (401)
T d1iira_         308 --HGGAGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGPIPTFDSLSAALATALTP  369 (401)
T ss_dssp             --CCCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSSSCCHHHHHHHHHHHTSH
T ss_pred             --cCCchHHHHHHHhCCCEEEccccccHHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence              355789999999999999976544    22 34556678988875   799999999999953

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=98.65  E-value=4.5e-07  Score=86.46  Aligned_cols=130  Identities=15%  Similarity=0.089  Sum_probs=82.5

Q ss_pred             CcEEEEEeecccccc--CHHHHHHHHHHhhhcCCCeEEEEEeCCcch-----hHHHHhcCCeEEcCCCChhHHHHHHHhc
Q 044542          286 VSLVMGVAGRLVRDK--GHPLLYEAFSSITRDHPGVYLLVAGTGPWG-----RRYAELGQNVKVLGALEAHQLSEFYNAL  358 (465)
Q Consensus       286 ~~~~l~~~Grl~~~K--g~~~ll~a~~~l~~~~~~~~l~ivG~g~~~-----~~~~~l~~~V~~~g~v~~~~~~~~~~~a  358 (465)
                      ..++.+..|......  -...++++++.+     +.++++...+...     ....+...+|.+..++|+.++.. ...+
T Consensus       265 ~~~v~~s~gs~~~~~~~~~~~~~~~~~~~-----~~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~pq~~lL~-hp~~  338 (450)
T d2c1xa1         265 TSVVYISFGTVTTPPPAEVVALSEALEAS-----RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLA-HEAV  338 (450)
T ss_dssp             TCEEEEECCSSCCCCHHHHHHHHHHHHHH-----TCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHT-STTE
T ss_pred             cceeeecccccccCCHHHHHHHHHHHHhc-----CCeEEEEECCCccccCChhhhhhccccccccccCChHhhhc-cCce
Confidence            335655666654321  133444455444     3445554433222     22344558999999997654322 2667


Q ss_pred             CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeee-CCceEEeCC---CHHHHHHHHHHHHhCChH
Q 044542          359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVN-EELGYTFSP---NVKSFVEALELVIRDGPK  427 (465)
Q Consensus       359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~-~~~G~l~~~---d~~~la~~i~~ll~~~~~  427 (465)
                      |++|.   +  |-..++.||+.+|+|+|+....+-..   ..+.+ .+.|+.++.   +.+++.++|.++++| +.
T Consensus       339 ~~fIt---H--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d-~~  408 (450)
T d2c1xa1         339 GAFVT---H--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EK  408 (450)
T ss_dssp             EEEEE---C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS-HH
T ss_pred             eEEEc---c--CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcC-cH
Confidence            77886   2  33569999999999999987654221   13444 478988874   899999999999998 53

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=98.49  E-value=8e-06  Score=77.79  Aligned_cols=96  Identities=11%  Similarity=0.080  Sum_probs=68.4

Q ss_pred             HhcCCeEEcCCCChhHHHHHH--HhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eee-eeCCceEEeC
Q 044542          335 ELGQNVKVLGALEAHQLSEFY--NALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVV-VNEELGYTFS  408 (465)
Q Consensus       335 ~l~~~V~~~g~v~~~~~~~~~--~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v-~~~~~G~l~~  408 (465)
                      ...+||.+..++|+.+   ++  ..++++|.   +  |-..++.||+.+|+|+|+....+-..   ..+ ...+.|+.++
T Consensus       343 ~~~~Nv~~~~~~Pq~~---lL~hp~~~~fIt---H--GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~  414 (473)
T d2pq6a1         343 EIADRGLIASWCPQDK---VLNHPSIGGFLT---H--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID  414 (473)
T ss_dssp             HHTTTEEEESCCCHHH---HHTSTTEEEEEE---C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred             hccCceEEeeeCCHHH---HhcCCcCcEEEe---c--CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence            4458999999997665   46  57777886   3  33569999999999999987653221   124 3336788887


Q ss_pred             C--CHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542          409 P--NVKSFVEALELVIRDGPKVLQRKGLACKEHA  440 (465)
Q Consensus       409 ~--d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~  440 (465)
                      .  +.++++++|.+++.| ++ .+++.++|++..
T Consensus       415 ~~~t~~~l~~ai~~vl~d-~~-~~~~r~~a~~l~  446 (473)
T d2pq6a1         415 TNVKREELAKLINEVIAG-DK-GKKMKQKAMELK  446 (473)
T ss_dssp             SSCCHHHHHHHHHHHHTS-HH-HHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHHcC-Ch-HHHHHHHHHHHH
Confidence            5  899999999999998 54 234455555433

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=98.49  E-value=6.6e-05  Score=70.91  Aligned_cols=101  Identities=15%  Similarity=0.094  Sum_probs=67.9

Q ss_pred             hcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---ee-eeeCCceEEeC---
Q 044542          336 LGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TV-VVNEELGYTFS---  408 (465)
Q Consensus       336 l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~-v~~~~~G~l~~---  408 (465)
                      ...++.+..+.++.++. .+..+|++|.   +  |--.++.||+.+|+|+|+....+-..   .. ++..+.|+.++   
T Consensus       328 ~~~n~~v~~~~pq~~~l-~~p~~~~fIt---H--GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~  401 (461)
T d2acva1         328 LEGKGMICGWAPQVEVL-AHKAIGGFVS---H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY  401 (461)
T ss_dssp             HHCSEEEESSCCHHHHH-HSTTEEEEEE---C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSC
T ss_pred             cCCCeEEEecCCHHHHH-hcccCCEEEe---c--CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccc
Confidence            44889999988755543 5688999997   2  33469999999999999977543210   12 34446787775   


Q ss_pred             ------CCHHHHHHHHHHHHhCChHH---HHHHHHHHHHHHHh
Q 044542          409 ------PNVKSFVEALELVIRDGPKV---LQRKGLACKEHALS  442 (465)
Q Consensus       409 ------~d~~~la~~i~~ll~~~~~~---~~~~~~~~~~~~~~  442 (465)
                            .+++++++++.+++.+++..   .+++++.+++.+++
T Consensus       402 ~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~  444 (461)
T d2acva1         402 RKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVD  444 (461)
T ss_dssp             CTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTST
T ss_pred             cccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcC
Confidence                  26899999999999753323   33444444544444

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.25  E-value=0.0011  Score=62.24  Aligned_cols=81  Identities=5%  Similarity=-0.054  Sum_probs=57.5

Q ss_pred             CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeee-CCceEEeC-----
Q 044542          338 QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVN-EELGYTFS-----  408 (465)
Q Consensus       338 ~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~-~~~G~l~~-----  408 (465)
                      +||.+.+|+|+.++.. ...++++|.   +  |-..++.||+.+|+|+|+...-+-..   ..+.+ -+.|+...     
T Consensus       334 ~nv~~~~w~Pq~~lL~-hp~~~~fVt---H--GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~~  407 (471)
T d2vcha1         334 RGFVIPFWAPQAQVLA-HPSTGGFLT---H--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDG  407 (471)
T ss_dssp             TEEEEESCCCHHHHHH-STTEEEEEE---C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTS
T ss_pred             CCeeecccCCHHHHhc-CccCCEEEe---c--CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCCC
Confidence            7899999998765322 146778886   3  33569999999999999987643210   12323 35666552     


Q ss_pred             C-CHHHHHHHHHHHHhC
Q 044542          409 P-NVKSFVEALELVIRD  424 (465)
Q Consensus       409 ~-d~~~la~~i~~ll~~  424 (465)
                      . +.+++.++|.+++++
T Consensus       408 ~~t~~~l~~ai~~vl~~  424 (471)
T d2vcha1         408 LVRREEVARVVKGLMEG  424 (471)
T ss_dssp             CCCHHHHHHHHHHHHTS
T ss_pred             cCCHHHHHHHHHHHhCC
Confidence            1 779999999999998

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=97.87  E-value=0.00012  Score=66.59  Aligned_cols=105  Identities=13%  Similarity=0.096  Sum_probs=72.7

Q ss_pred             cccccCCCCCCcEEEEEeec-cccccC--HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--------CC-eEEc
Q 044542          276 FPEKLGVPANVSLVMGVAGR-LVRDKG--HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--------QN-VKVL  343 (465)
Q Consensus       276 ~r~~~g~~~~~~~~l~~~Gr-l~~~Kg--~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--------~~-V~~~  343 (465)
                      ..+++++..+++.+++..|. ..+.|.  .+.+.+.+..+.++  +.+++++|.+.+.+..+.+.        .. +.+.
T Consensus       170 ~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~  247 (348)
T d1pswa_         170 TCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLA  247 (348)
T ss_dssp             HHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECT
T ss_pred             HHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhhc--CCccccccccchHHHHHHHHHhhhccccccccccc
Confidence            44455666666566656653 333454  45678888888775  46788888766655544431        33 4567


Q ss_pred             CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542          344 GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP  388 (465)
Q Consensus       344 g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s  388 (465)
                      |..+-.|+..+++.||++|.+..   |   .+--|.++|+|+|+-
T Consensus       248 g~~sl~el~~li~~a~l~I~~Dt---g---~~HlAaa~g~p~i~l  286 (348)
T d1pswa_         248 GETQLDQAVILIAACKAIVTNDS---G---LMHVAAALNRPLVAL  286 (348)
T ss_dssp             TTSCHHHHHHHHHTSSEEEEESS---H---HHHHHHHTTCCEEEE
T ss_pred             CCccHHHHHHHHhcceeEeecCc---c---HHHHHHHcCCCEEEE
Confidence            88888999999999999998532   2   567799999999974

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.53  E-value=0.0012  Score=65.35  Aligned_cols=182  Identities=14%  Similarity=0.122  Sum_probs=124.4

Q ss_pred             hcccCEEEEeChhHHHHHHHH-----hCCCCCCEEEecCCCCCCCccCCcc--------------------c--------
Q 044542          226 FSSYNQHICISNSAAEVLVKI-----YQLPQRNVHVILNGVDETKFVHDPE--------------------A--------  272 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~-----~~~~~~ki~vi~ngvd~~~~~~~~~--------------------~--------  272 (465)
                      +..+..+-.||.--.+.+++.     +.+.+.++.-+-|||....+.....                    .        
T Consensus       435 l~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~  514 (824)
T d2gj4a1         435 IAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYV  514 (824)
T ss_dssp             HHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGT
T ss_pred             HHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhC
Confidence            455566777887776666552     3445678999999999877643110                    0        


Q ss_pred             -C-------------------ccccccc--CCCCCCcEEEEEeeccccccCHHHH----HHHHHHhhhc----CCCeEEE
Q 044542          273 -G-------------------VRFPEKL--GVPANVSLVMGVAGRLVRDKGHPLL----YEAFSSITRD----HPGVYLL  322 (465)
Q Consensus       273 -~-------------------~~~r~~~--g~~~~~~~~l~~~Grl~~~Kg~~~l----l~a~~~l~~~----~~~~~l~  322 (465)
                       .                   ..++++.  .+.++. +.++++-|+..+|...+.    +..+.++++.    ..+++++
T Consensus       515 ~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~-lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~I  593 (824)
T d2gj4a1         515 DDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNS-LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM  593 (824)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred             CCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcch-hhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEE
Confidence             0                   0011122  344454 888899999999999873    3334555442    1358899


Q ss_pred             EEeCCc---c--hhHHHH---hc------------CCeEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHc
Q 044542          323 VAGTGP---W--GRRYAE---LG------------QNVKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHC  381 (465)
Q Consensus       323 ivG~g~---~--~~~~~~---l~------------~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~  381 (465)
                      +.|.-.   .  ++.++.   ++            -+|.|+...+-.-...++.++||.++.+.. .|..|++-+-+|.-
T Consensus       594 FaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN  673 (824)
T d2gj4a1         594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN  673 (824)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred             EeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc
Confidence            999631   1  122221   11            268999998877788888999999996653 48899999999999


Q ss_pred             CCeEEecCCCCcceeeeee--CCceEEeCC
Q 044542          382 GRTVLTPNYPSIVRTVVVN--EELGYTFSP  409 (465)
Q Consensus       382 G~PvI~s~~gg~~~e~v~~--~~~G~l~~~  409 (465)
                      |.+.+++--|... |+..+  +++|+.|-.
T Consensus       674 Gal~lstlDGwnv-Ei~~~vg~~N~~~fG~  702 (824)
T d2gj4a1         674 GALTIGTMDGANV-EMAEEAGEENFFIFGM  702 (824)
T ss_dssp             TCEEEECSCTTHH-HHHHHHCGGGSEECSC
T ss_pred             CCeeeccccchHH-HHHHhcCcccEEEeCC
Confidence            9999999988877 65543  778999864

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.0012  Score=65.20  Aligned_cols=182  Identities=13%  Similarity=0.065  Sum_probs=123.7

Q ss_pred             hcccCEEEEeChhHHHHHHHH-----hCCCCCCEEEecCCCCCCCccCCc--------------------cc--------
Q 044542          226 FSSYNQHICISNSAAEVLVKI-----YQLPQRNVHVILNGVDETKFVHDP--------------------EA--------  272 (465)
Q Consensus       226 ~~~~d~ii~~S~~~~~~~~~~-----~~~~~~ki~vi~ngvd~~~~~~~~--------------------~~--------  272 (465)
                      +..+..+-.||+--.+..++.     +.+.+.++.-|-|||....+....                    ..        
T Consensus       411 l~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~  490 (796)
T d1l5wa_         411 VVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFA  490 (796)
T ss_dssp             HHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGG
T ss_pred             HHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhcc
Confidence            455677888998877765542     234467899999999876553210                    00        


Q ss_pred             -C----c---------------ccccccC--CCCCCcEEEEEeeccccccCHHHHHHHH----HHhhhc----CCCeEEE
Q 044542          273 -G----V---------------RFPEKLG--VPANVSLVMGVAGRLVRDKGHPLLYEAF----SSITRD----HPGVYLL  322 (465)
Q Consensus       273 -~----~---------------~~r~~~g--~~~~~~~~l~~~Grl~~~Kg~~~ll~a~----~~l~~~----~~~~~l~  322 (465)
                       .    .               .++++.|  +.++. +.++++-|+..+|..++++.-.    ..+...    ..+++++
T Consensus       491 ~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~-LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~I  569 (796)
T d1l5wa_         491 DDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQA-IFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFL  569 (796)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhh-ccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEE
Confidence             0    0               0111223  34444 8899999999999998854332    333332    1258899


Q ss_pred             EEeCCcc-----hhHHHH---hc------------CCeEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHc
Q 044542          323 VAGTGPW-----GRRYAE---LG------------QNVKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHC  381 (465)
Q Consensus       323 ivG~g~~-----~~~~~~---l~------------~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~  381 (465)
                      ++|.-..     ++.++.   ++            -+|.|+...+-+-...++.++||-++.+.. .|..|++-+=||.-
T Consensus       570 faGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN  649 (796)
T d1l5wa_         570 FGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN  649 (796)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT
T ss_pred             EcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc
Confidence            9997321     222221   11            169999999877778888999999996542 48999999999999


Q ss_pred             CCeEEecCCCCcceeeeee--CCceEEeCC
Q 044542          382 GRTVLTPNYPSIVRTVVVN--EELGYTFSP  409 (465)
Q Consensus       382 G~PvI~s~~gg~~~e~v~~--~~~G~l~~~  409 (465)
                      |.+.+++--|... |+..+  +++|+.|-.
T Consensus       650 G~lnlstlDGw~v-E~~~~vg~eN~f~fG~  678 (796)
T d1l5wa_         650 GALTVGTLDGANV-EIAEKVGEENIFIFGH  678 (796)
T ss_dssp             TCEEEECSCTTHH-HHHHHHCGGGSEECSC
T ss_pred             CCeeeecccchHH-HHHHhcCccceEEecC
Confidence            9999999988877 66543  789999954

>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: Prokaryotic glutathione synthetase, N-terminal domain
domain: Prokaryotic glutathione synthetase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.73  E-value=0.12  Score=37.99  Aligned_cols=43  Identities=14%  Similarity=0.116  Sum_probs=30.2

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD  124 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~  124 (465)
                      +|||+|+...+.. -....  .....|+++..++||+|.++.+.+-
T Consensus         1 mmkI~FimDpie~-l~~~k--DTT~~Lm~eAq~Rg~~v~~~~~~dL   43 (122)
T d1gsaa1           1 MIKLGIVMDPIAN-INIKK--DSSFAMLLEAQRRGYELHYMEMGDL   43 (122)
T ss_dssp             CCEEEEECSCGGG-CCTTT--CHHHHHHHHHHHTTCEEEEECGGGE
T ss_pred             CcEEEEEeCCHHH-CCCCC--ChHHHHHHHHHHCCCeEEEEecCce
Confidence            4899999875421 12222  2356788888999999999987764

>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog TM1662
species: Thermotoga maritima [TaxId: 2336]

Probab=88.61  E-value=0.6  Score=38.87  Aligned_cols=40  Identities=23%  Similarity=0.402  Sum_probs=28.0

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP  127 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~  127 (465)
                      ||||+....   |...-|    +..|+++|++ +|+|+|+++......
T Consensus         1 M~ILltNDD---Gi~s~g----l~~L~~~l~~-~~~V~vvAP~~~~S~   40 (247)
T d1j9ja_           1 MRILVTNDD---GIQSKG----IIVLAELLSE-EHEVFVVAPDKERSA   40 (247)
T ss_dssp             CEEEEECSS---CTTCHH----HHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred             CeEEEEcCC---CCCChH----HHHHHHHHhc-CCeEEEEecCCCCcC
Confidence            899988764   122223    5678888865 799999999875543

>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: WrbA-like
domain: Trp repressor binding protein WrbA
species: Deinococcus radiodurans [TaxId: 1299]

Probab=87.48  E-value=0.51  Score=37.86  Aligned_cols=40  Identities=23%  Similarity=0.204  Sum_probs=34.0

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      +|||++|..+     ..|-.+..+..+++.+.+.|+||.++...+
T Consensus         2 ~mkilivy~S-----~~GnT~~la~~ia~g~~~~G~ev~~~~~~~   41 (201)
T d1ydga_           2 PVKLAIVFYS-----STGTGYAMAQEAAEAGRAAGAEVRLLKVRE   41 (201)
T ss_dssp             CCEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CcEEEEEEeC-----CCcHHHHHHHHHHHHHHhcCCEEEEEEccc
Confidence            7999999754     457778888999999999999999997765

>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: tRNA 2-thiouridine synthesizing protein D, TusD
species: Escherichia coli [TaxId: 562]

Probab=87.37  E-value=0.56  Score=34.46  Aligned_cols=42  Identities=24%  Similarity=0.252  Sum_probs=31.7

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEE-EEeCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIH-VFTAPSD  124 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~-v~~~~~~  124 (465)
                      ||++++.+.=|   ..+........+++++.+.||+|. ||...+.
T Consensus         1 Mk~~i~v~~~P---~~~~~a~~A~~fA~aal~~Gh~V~~vF~~~dG   43 (128)
T d2d1pa1           1 MRFAIVVTGPA---YGTQQASSAFQFAQALIADGHELSSVFFYREG   43 (128)
T ss_dssp             CEEEEEECSCS---SSSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred             CEEEEEEecCC---CCcHHHHHHHHHHHHHHhCCCceeEEEEechH
Confidence            78888887643   334456678899999999999994 8776653

>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: Sulfurtransferase DsrE
species: Chromatium vinosum [TaxId: 1049]

Probab=86.48  E-value=0.69  Score=34.06  Aligned_cols=41  Identities=27%  Similarity=0.295  Sum_probs=31.3

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEE-EEEeCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEI-HVFTAPS  123 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~  123 (465)
                      ||++++...=|   ..+-..+....+++++.+.||+| .||...+
T Consensus         1 Mk~~i~v~~~P---~~~~~a~~al~fA~aal~~gh~V~~vFf~~d   42 (130)
T d2hy5a1           1 MKFALQINEGP---YQHQASDSAYQFAKAALEKGHEIFRVFFYHD   42 (130)
T ss_dssp             CEEEEEECSCT---TTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred             CEEEEEEcCCC---CCcHHHHHHHHHHHHHHHCCCeEEEEEEecc
Confidence            79999887643   23445677889999999999999 4886554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.21  E-value=0.31  Score=38.71  Aligned_cols=34  Identities=29%  Similarity=0.422  Sum_probs=26.3

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      |||+++..       .||+   =..+++.|++.||+|.+.....
T Consensus         1 Mki~vigG-------aG~i---G~alA~~la~~G~~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGG-------TGNL---GKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETT-------TSHH---HHHHHHHHHTTTCEEEEEESSH
T ss_pred             CEEEEEeC-------CcHH---HHHHHHHHHHCCCEEEEEECCH
Confidence            89998832       2554   5589999999999999997543

>d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: LmbE-like
superfamily: LmbE-like
family: LmbE-like
domain: Hypothetical protein TT1542
species: Thermus thermophilus [TaxId: 274]

Probab=85.73  E-value=0.86  Score=37.27  Aligned_cols=40  Identities=18%  Similarity=0.160  Sum_probs=26.1

Q ss_pred             ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542           79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD  124 (465)
Q Consensus        79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~  124 (465)
                      +||||+|++. |     .-.+.-+-.....+.+.|++|++++....
T Consensus         1 m~~VLvi~aH-P-----DDe~lg~GGtiak~~~~G~~V~vv~~T~G   40 (227)
T d1uana_           1 MLDLLVVAPH-P-----DDGELGCGGTLARAKAEGLSTGILDLTRG   40 (227)
T ss_dssp             CEEEEEEESS-T-----THHHHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred             CceEEEEEeC-C-----ChHHHHHHHHHHHHHHcCCeEEEEEEeCC
Confidence            5899999875 3     22233333344556778999988886544

>d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog PAE2908 (SurE-alpha)
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=84.25  E-value=0.74  Score=38.96  Aligned_cols=41  Identities=20%  Similarity=0.323  Sum_probs=29.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH  128 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  128 (465)
                      ||||+....   |..    ..-+..|+++|.+.| +|+|+++.......
T Consensus         1 M~ILlTNDD---Gi~----a~Gl~~L~~~l~~~g-~V~vvAP~~~~Sg~   41 (276)
T d1l5xa_           1 MKILVTNDD---GVH----SPGLRLLYQFALSLG-DVDVVAPESPKSAT   41 (276)
T ss_dssp             CEEEEECSS---CTT----CHHHHHHHHHHGGGS-EEEEEEESSCTTTS
T ss_pred             CeEEEEcCC---CCC----CHHHHHHHHHHHhcC-CEEEEecCCCCcCc
Confidence            899988764   112    234788999999998 79999988765443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=82.00  E-value=1  Score=34.42  Aligned_cols=33  Identities=24%  Similarity=0.468  Sum_probs=25.8

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS  123 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  123 (465)
                      |||+++..        |.++.   .++..|.+.||+|+++....
T Consensus         1 MkI~IiGa--------G~iG~---~~a~~L~~~G~~V~~~~r~~   33 (167)
T d1ks9a2           1 MKITVLGC--------GALGQ---LWLTALCKQGHEVQGWLRVP   33 (167)
T ss_dssp             CEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEECc--------CHHHH---HHHHHHHHCCCceEEEEcCH
Confidence            89999943        55444   47888899999999998654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.58  E-value=2.4  Score=28.56  Aligned_cols=79  Identities=14%  Similarity=0.135  Sum_probs=46.3

Q ss_pred             eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcEE
Q 044542           80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDYV  159 (465)
Q Consensus        80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~DiI  159 (465)
                      |||-|+        ..||...  ..||+.|.++|++|.-.-.... .....+...+..+..-... .     .-.++|+|
T Consensus         2 ~~ihfi--------GIgG~GM--s~LA~~L~~~G~~VsGSD~~~~-~~t~~L~~~Gi~i~~gh~~-~-----~i~~~d~v   64 (89)
T d1j6ua1           2 MKIHFV--------GIGGIGM--SAVALHEFSNGNDVYGSNIEET-ERTAYLRKLGIPIFVPHSA-D-----NWYDPDLV   64 (89)
T ss_dssp             CEEEEE--------TTTSHHH--HHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTCCEESSCCT-T-----SCCCCSEE
T ss_pred             cEEEEE--------eECHHHH--HHHHHHHHhCCCeEEEEeCCCC-hhHHHHHHCCCeEEeeecc-c-----ccCCCCEE
Confidence            687777        3477654  4689999999999887754321 1111345555544432111 1     12468998


Q ss_pred             EecCC------chhHHhhhcCC
Q 044542          160 HTESV------SLPHWRAKMVP  175 (465)
Q Consensus       160 ~~~~~------~~~~~~~~~~p  175 (465)
                      +..+.      .+..+..+++|
T Consensus        65 V~SsAI~~~npel~~A~~~gIp   86 (89)
T d1j6ua1          65 IKTPAVRDDNPEIVRARMERVP   86 (89)
T ss_dssp             EECTTCCTTCHHHHHHHHTTCC
T ss_pred             EEecCcCCCCHHHHHHHHcCCC
Confidence            87653      34455556666