Citrus Sinensis ID: 044590


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
MSRFLLALAIFLSLILLTTAHSGHDDEGDEDNDTETEPHNLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADLERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIWDT
cHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccc
cHHHHHHHHHHHHHHHHHHHHcccccccccHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcHHHHHEEHEEHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcc
MSRFLLALAIFLSLILLTtahsghddegdedndtetephnlrskpliLVKIWCLMIIFVGTfvggvspyflKWNEGFLVLGTQFAGGVFLGTALMHFLSDanetfgdltskeyPFAFMLACAGYLFTMLADCAISFVldkkrdasnadlerqggleggksshhsatsqsvsqgqngtdghssKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRmipdrpflSCVAYAFAFAISSPVGVAIGIIIdattqgpvaDWIFAISMGLACGVFIYVSINHllskgytpqktvsvdtpnyKFLAVVLGVGVIAVVMIWDT
MSRFLLALAIFLSLILLTTAHSGHDDEGDEDNDTETEPHNLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADLERQGGleggksshhsatsqSVSQGQNGTDGHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIWDT
MSRfllalaiflslillTTAHSGHddegdedndtetePHNLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADLERQGGLEGGKsshhsatsqsvsqGQNGTDGHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFlavvlgvgviavvmiWDT
***FLLALAIFLSLILLTTA************************PLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLD***************************************************SLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIW**
*SRFLLALAIFLSLILLTTAH***********************PLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDA************GGKS******************************SLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQK**SVDTPNYKFLAVVLGVGVIAVVMIWDT
MSRFLLALAIFLSLILLTTAH******************NLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADLE*******************************SKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIWDT
*SRFLLALAIFLSLILLTTAHSGHD*************HNLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLDKKR*****************************************FSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIWDT
iiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoo
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSRFLLALAIFLSLILLTTAHSGHDDEGDEDNDTETEPHNLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADLERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIWDT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query347 2.2.26 [Sep-21-2011]
Q852F6358 Zinc transporter 2 OS=Ory yes no 0.899 0.871 0.684 1e-119
Q94EG9326 Zinc transporter 11 OS=Ar yes no 0.853 0.907 0.634 1e-114
Q94DG6352 Zinc transporter 1 OS=Ory no no 0.927 0.914 0.572 1e-100
Q9LTH9353 Zinc transporter 2 OS=Ara no no 0.971 0.954 0.543 1e-96
A4IIC5314 Zinc transporter ZIP3 OS= yes no 0.832 0.920 0.269 3e-18
P59889302 Zinc transporter ZIP1 OS= yes no 0.737 0.847 0.284 7e-17
O81850350 Fe(2+) transport protein no no 0.930 0.922 0.235 1e-14
Q55EA1683 Protein zntD OS=Dictyoste yes no 0.438 0.222 0.312 1e-13
Q8W245364 Probable zinc transporter no no 0.965 0.920 0.223 1e-13
Q6QQT1302 Zinc transporter ZIP1 OS= N/A no 0.726 0.834 0.288 4e-13
>sp|Q852F6|ZIP2_ORYSJ Zinc transporter 2 OS=Oryza sativa subsp. japonica GN=ZIP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  428 bits (1101), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/314 (68%), Positives = 245/314 (78%), Gaps = 2/314 (0%)

Query: 35  ETEPHNLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTAL 94
           E +P +LR++ L+  K+WCL ++F GT  GGVSPYF++WN+ FL LGTQFAGGVFLGTA+
Sbjct: 46  EGKP-DLRARGLVAAKLWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGTAM 104

Query: 95  MHFLSDANETFGDL-TSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADLERQG 153
           MHFL+DANETF DL     YPFAFMLACAGY+ TMLADCAISFV+ +    +        
Sbjct: 105 MHFLADANETFADLLPGTAYPFAFMLACAGYVLTMLADCAISFVVARGGGRTEPAAAAGA 164

Query: 154 GLEGGKSSHHSATSQSVSQGQNGTDGHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAI 213
           GLE GK S  +  +            HS    L  AS+LGDS+LLI ALCFHSVFEGIAI
Sbjct: 165 GLEEGKLSSTNGNASDPPAADAAAQDHSVASMLRNASTLGDSVLLIAALCFHSVFEGIAI 224

Query: 214 GVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAI 273
           GVAET+ADAWKALWTI LHKIFAAIAMGIALLRM+PDRPFLSC  YAFAFA+SSPVGV I
Sbjct: 225 GVAETKADAWKALWTISLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAVSSPVGVGI 284

Query: 274 GIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVV 333
           GI+IDATTQG VADWIFA+SMGLA G+FIYVSINHLLSKGYTP + V+ DTP  + LAVV
Sbjct: 285 GIVIDATTQGRVADWIFAVSMGLATGIFIYVSINHLLSKGYTPLRPVAADTPAGRLLAVV 344

Query: 334 LGVGVIAVVMIWDT 347
           LGV VIAVVMIWDT
Sbjct: 345 LGVAVIAVVMIWDT 358




Zinc transporter that may be involved in zinc uptake from the rhizosphere.
Oryza sativa subsp. japonica (taxid: 39947)
>sp|Q94EG9|ZIP11_ARATH Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1 Back     alignment and function description
>sp|Q94DG6|ZIP1_ORYSJ Zinc transporter 1 OS=Oryza sativa subsp. japonica GN=ZIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH9|ZIP2_ARATH Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1 Back     alignment and function description
>sp|A4IIC5|S39A3_XENTR Zinc transporter ZIP3 OS=Xenopus tropicalis GN=slc39a3 PE=2 SV=1 Back     alignment and function description
>sp|P59889|S39A1_DANRE Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE=2 SV=1 Back     alignment and function description
>sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 Back     alignment and function description
>sp|Q55EA1|ZNTD_DICDI Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1 Back     alignment and function description
>sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=3 SV=2 Back     alignment and function description
>sp|Q6QQT1|S39A1_TAKRU Zinc transporter ZIP1 OS=Takifugu rubripes GN=slc39a1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
224061216349 ZIP transporter [Populus trichocarpa] gi 0.994 0.988 0.774 1e-139
359494259342 PREDICTED: zinc transporter 2-like isofo 0.870 0.883 0.779 1e-137
225461882347 PREDICTED: zinc transporter 2-like isofo 0.884 0.884 0.785 1e-136
147792926346 hypothetical protein VITISV_014079 [Viti 0.933 0.936 0.736 1e-135
255563530350 zinc transporter, putative [Ricinus comm 0.988 0.98 0.734 1e-135
350538565350 zinc transporter-like precursor [Solanum 0.896 0.888 0.759 1e-134
225461880345 PREDICTED: zinc transporter 2 [Vitis vin 0.904 0.910 0.758 1e-133
296089899322 unnamed protein product [Vitis vinifera] 0.884 0.953 0.772 1e-130
225461878319 PREDICTED: zinc transporter 11-like [Vit 0.864 0.940 0.712 1e-128
118486253350 unknown [Populus trichocarpa] 0.985 0.977 0.720 1e-128
>gi|224061216|ref|XP_002300374.1| ZIP transporter [Populus trichocarpa] gi|222847632|gb|EEE85179.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 271/350 (77%), Positives = 297/350 (84%), Gaps = 5/350 (1%)

Query: 1   MSRFLLALAIFLSLILLTTAHSGHDDEGDEDNDTE--TEPHNLRSKPLILVKIWCLMIIF 58
           MSR LL L++FLSL+LLT  HSGH+D+ + D D +  T   NLRSK LILVKIWCL++IF
Sbjct: 1   MSRSLLFLSLFLSLLLLTAGHSGHNDDDEADADADGDTTKINLRSKSLILVKIWCLILIF 60

Query: 59  VGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFM 118
           +GTF+GGVSPYFLKWNEGFLVLGTQFA GVFLGTALMHFLSDANETF DLT KEYPFAFM
Sbjct: 61  IGTFIGGVSPYFLKWNEGFLVLGTQFASGVFLGTALMHFLSDANETFEDLTKKEYPFAFM 120

Query: 119 LACAGYLFTMLADCAISFVLDKK--RDASNADLERQGGLEGGKSSHHSATSQSVSQGQNG 176
           LACAGYL TMLAD  IS V  K     A+  D+E QGG+  GK SH +++SQS  Q  NG
Sbjct: 121 LACAGYLLTMLADSIISHVYSKDVVSQANGGDVELQGGVLQGKRSH-TSSSQSHFQMHNG 179

Query: 177 TDGHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFA 236
           TD  S+K +L+ ASS GDSILLI ALCFHSVFEGIAIGVA+T ADAWKALWTI LHKIFA
Sbjct: 180 TDAASAKSTLSTASSFGDSILLIFALCFHSVFEGIAIGVAKTNADAWKALWTITLHKIFA 239

Query: 237 AIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGL 296
           AIAMGIALLRMIPDRP +SCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGL
Sbjct: 240 AIAMGIALLRMIPDRPCVSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGL 299

Query: 297 ACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIWD 346
           ACGVFIYVSINHL +KGY PQ++V VDTP YKFLAV LG+GVIAVVMIWD
Sbjct: 300 ACGVFIYVSINHLSTKGYLPQRSVLVDTPLYKFLAVSLGIGVIAVVMIWD 349




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494259|ref|XP_003634744.1| PREDICTED: zinc transporter 2-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461882|ref|XP_002265634.1| PREDICTED: zinc transporter 2-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147792926|emb|CAN73198.1| hypothetical protein VITISV_014079 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255563530|ref|XP_002522767.1| zinc transporter, putative [Ricinus communis] gi|223538005|gb|EEF39618.1| zinc transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|350538565|ref|NP_001234349.1| zinc transporter-like precursor [Solanum lycopersicum] gi|119214944|gb|ABL61268.1| putative zinc transporter [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|225461880|ref|XP_002265513.1| PREDICTED: zinc transporter 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296089899|emb|CBI39718.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461878|ref|XP_002265400.1| PREDICTED: zinc transporter 11-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|118486253|gb|ABK94968.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
TAIR|locus:2012020326 ZIP11 "zinc transporter 11 pre 0.492 0.524 0.691 1.8e-97
TAIR|locus:2148398353 ZIP2 "AT5G59520" [Arabidopsis 0.864 0.849 0.550 4.3e-86
UNIPROTKB|Q94DG6352 ZIP1 "Zinc transporter 1" [Ory 0.867 0.855 0.555 8e-85
DICTYBASE|DDB_G0269326683 zntD "zinc transporter" [Dicty 0.360 0.183 0.320 8.7e-24
FB|FBgn0038412495 Zip3 "Zinc/iron regulated tran 0.342 0.240 0.365 1.1e-19
ZFIN|ZDB-GENE-030131-9917302 slc39a1 "solute carrier family 0.729 0.837 0.278 5.1e-19
FB|FBgn0033097305 CG9430 [Drosophila melanogaste 0.331 0.377 0.333 5.4e-16
RGD|1306291309 Slc39a2 "solute carrier family 0.331 0.372 0.302 1.4e-15
WB|WBGene00009286318 F31C3.4 [Caenorhabditis elegan 0.746 0.814 0.242 4.6e-15
UNIPROTKB|Q6QQT1302 slc39a1 "Zinc transporter ZIP1 0.723 0.831 0.304 6.1e-15
TAIR|locus:2012020 ZIP11 "zinc transporter 11 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 624 (224.7 bits), Expect = 1.8e-97, Sum P(2) = 1.8e-97
 Identities = 119/172 (69%), Positives = 137/172 (79%)

Query:   176 GTDGHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIF 235
             G D  S++ S T  +S+GDSILLIVALCFHSVFEGIAIG++ET++DAW+ALWTI LHKIF
Sbjct:   156 GED-KSNQRSATTETSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIF 214

Query:   236 AAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMG 295
             AAIAMGIALLRMIPDRP  S + Y+FAFAISSP+GVAIGI+IDATTQG +ADWIFA+SM 
Sbjct:   215 AAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMS 274

Query:   296 LACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFXXXXXXXXXXXXXXXWDT 347
             LACGVF+YVS+NHLL+KGY P K V VD P YKF               WDT
Sbjct:   275 LACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIWDT 326


GO:0005886 "plasma membrane" evidence=ISM
GO:0006812 "cation transport" evidence=ISS
GO:0008324 "cation transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0030001 "metal ion transport" evidence=IEA
GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2148398 ZIP2 "AT5G59520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q94DG6 ZIP1 "Zinc transporter 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269326 zntD "zinc transporter" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0038412 Zip3 "Zinc/iron regulated transporter-related protein 3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9917 slc39a1 "solute carrier family 39 (zinc transporter), member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0033097 CG9430 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1306291 Slc39a2 "solute carrier family 39 (zinc transporter), member 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00009286 F31C3.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6QQT1 slc39a1 "Zinc transporter ZIP1" [Takifugu rubripes (taxid:31033)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94EG9ZIP11_ARATHNo assigned EC number0.63470.85300.9079yesno
Q852F6ZIP2_ORYSJNo assigned EC number0.68470.89910.8715yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
pfam02535314 pfam02535, Zip, ZIP Zinc transporter 2e-47
TIGR00820324 TIGR00820, zip, ZIP zinc/iron transport family 4e-17
PLN02159337 PLN02159, PLN02159, Fe(2+) transport protein 2e-14
COG0428266 COG0428, COG0428, Predicted divalent heavy-metal c 2e-06
>gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter Back     alignment and domain information
 Score =  162 bits (411), Expect = 2e-47
 Identities = 69/315 (21%), Positives = 131/315 (41%), Gaps = 21/315 (6%)

Query: 48  LVKIWCLMIIFVGTFVGGVSPYFLKWNEG-----FLVLGTQFAGGVFLGTALMHFLSDAN 102
           L+KI+ +  I + + +G + P  +           L     FA GV LGTA +H L +A 
Sbjct: 2   LLKIYAIFAILITSLIGLLLPLLIPLISKSRSSKLLSFLLAFAAGVLLGTAFLHLLPEAL 61

Query: 103 ETFGDLTSKE-----YPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADL------ER 151
           E              +PFA ++   G+   +L +  +++   +     +           
Sbjct: 62  EALESSPCLGDHGPWHPFAGLIVLLGFFLVLLVEKLLTYYKGRGHSHGHDHGHDGEHSHT 121

Query: 152 QGGLEGGKSSHHSATSQSVSQ---GQNGTDGHSSKFSLTAASSLGDSILLIVALCFHSVF 208
               E G    +    +         +           +       + LL + +  HS F
Sbjct: 122 VPDEESGAVESNVVHHEHGEGPHHHHHEGHEKGESDKESGLRVRDIAWLLELGIILHSFF 181

Query: 209 EGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSP 268
           EG+AIGV+ + +        I  H++   + +G  LL+    R     V  A  FA+++P
Sbjct: 182 EGLAIGVSFSSSTGISLFIAILFHELPEGLGLGAILLQAGFSRKKA--VLLALLFALTTP 239

Query: 269 VGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYK 328
           +G+AIGI+I +++  P +D    I +  + G F+YV++  LL +     +  S+     +
Sbjct: 240 LGIAIGILISSSSNSPGSDITTGILLAFSAGTFLYVALVELLPEELANSEEQSLKLQLLQ 299

Query: 329 FLAVVLGVGVIAVVM 343
            LA++LG  ++A++ 
Sbjct: 300 LLALLLGFALMALIA 314


The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family. Length = 314

>gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family Back     alignment and domain information
>gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein Back     alignment and domain information
>gnl|CDD|223505 COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 347
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 100.0
TIGR00820324 zip ZIP zinc/iron transport family. transport has 100.0
PLN02159337 Fe(2+) transport protein 100.0
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 100.0
PRK04201265 zinc transporter ZupT; Provisional 100.0
COG0428266 Predicted divalent heavy-metal cations transporter 99.95
KOG2693453 consensus Putative zinc transporter [Inorganic ion 99.87
KOG2694361 consensus Putative zinc transporter [Inorganic ion 99.84
KOG3907303 consensus ZIP-like zinc transporter proteins [Intr 99.7
KOG2474406 consensus Zinc transporter and related ZIP domain- 98.99
PRK04201 265 zinc transporter ZupT; Provisional 98.23
PF02535 317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 96.26
COG0428266 Predicted divalent heavy-metal cations transporter 93.49
PRK11469188 hypothetical protein; Provisional 90.01
TIGR00820324 zip ZIP zinc/iron transport family. transport has 87.64
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 85.73
COG5336116 Uncharacterized protein conserved in bacteria [Fun 81.9
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=2.3e-53  Score=402.42  Aligned_cols=301  Identities=29%  Similarity=0.515  Sum_probs=237.4

Q ss_pred             CcCCcchHHHHHHHHHHHHHHHHhhhhccccccc------chhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccC-----
Q 044590           40 NLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKW------NEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDL-----  108 (347)
Q Consensus        40 ~~~~~~l~~~ki~~l~~i~~~t~~G~~iP~~~~~------~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~-----  108 (347)
                      +.+.++...+|+++++++|++|++|+++|++.|+      +++.+.+.+||++||+|+|+|+|+|||++|.+++.     
T Consensus         9 ~~~~~~~~~lKi~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~~~~~   88 (327)
T KOG1558|consen    9 CADKMGALLLKIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLCLADN   88 (327)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhcccccCC
Confidence            3456667788999999999999999999998864      56799999999999999999999999999998875     


Q ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCc-ccccCCCCCCCCCCCCCCCccccCCCCCCCCCCccc--
Q 044590          109 TSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDA-SNAD-LERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSKF--  184 (347)
Q Consensus       109 ~~~~~p~~~~~~~~Gf~l~~lle~i~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~--  184 (347)
                      ++.+||++.+++++||++++++|.+...+.++++.+ .+.+ ...+++++....+...  ++.  .++++++.|....  
T Consensus        89 ~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~  164 (327)
T KOG1558|consen   89 PWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGEDLRAVGNGE--HGA--IHVGHSHGHSEPSTP  164 (327)
T ss_pred             CCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcccccccccC--Ccc--ccCCCCCCCCCCCCc
Confidence            457899999999999999999999999887554332 1100 0011111000000000  000  0001111111000  


Q ss_pred             cc--ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHH
Q 044590          185 SL--TAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFA  262 (347)
Q Consensus       185 ~~--~~~~~~~~~~ll~~al~~Hs~~EGlalGv~~~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~  262 (347)
                      ..  ..+.+..+++.+++|+++||++||+++|++.+++..|.++.|+.+||.+||+++|.++.++  ++++++.+.++++
T Consensus       165 ~~~~~~~~~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a--~~~~~~~~~~~~~  242 (327)
T KOG1558|consen  165 GVVDDGQASRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQA--GFTFKSAVLMALF  242 (327)
T ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhc--ccchHHHHHHHHH
Confidence            00  0111345688999999999999999999999999999999999999999999999999998  3556789999999


Q ss_pred             HHhhhHHHHHHHHHhhhc-CCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 044590          263 FAISSPVGVAIGIIIDAT-TQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAV  341 (347)
Q Consensus       263 fsl~tPiG~~iG~~i~~~-~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~  341 (347)
                      ||++||+|+++|+.+.+. .++..++++.++++|+|+|+|+||+++|++|+++.+++.++.+.++.+++++++|+++|++
T Consensus       243 fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i~~~~G~alms~  322 (327)
T KOG1558|consen  243 FSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLIALLLGFALMSL  322 (327)
T ss_pred             HHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHHHHHHhHHHHHH
Confidence            999999999999999887 4567889999999999999999999999999999877644578899999999999999999


Q ss_pred             HHhhc
Q 044590          342 VMIWD  346 (347)
Q Consensus       342 l~~w~  346 (347)
                      +++|+
T Consensus       323 l~~wa  327 (327)
T KOG1558|consen  323 LAIWA  327 (327)
T ss_pred             HHHhC
Confidence            99996



>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11469 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00