Citrus Sinensis ID: 044639


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430
MDSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYEIVEGGEEEEEVIVHEIEELEEEEPVDNGLSRPLLVEAEWPGLEDKETEHCKKPFIARLFNSIPVISQTNIPDFDSMEDGTPPTKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccHHHHHHHHHcccccccccHHHcccccEEHHHHHHHHHHHHEEEccccccccccccHHcccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHcccHHHHHHHHHHHHccHHHHHccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccEEEEcHHcHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
MDSGGADAVNAVLPLLKLLSIAVIGSliahpkfqfvpkETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVtlicqpppqffRFTIIMTAfgntgyipLSVVSSVchnntnnpfgsecydkGVAYVSFSQWIHVILVYTLVYhmmeppleyyeiveggeeeEEVIVHEIeeleeeepvdnglsrpllveaewpgledketehckkpFIARLFnsipvisqtnipdfdsmedgtpptkvVKKIRIVAehtpirqilqppvFASLFAILIGIipglksfavgsdaplgfitdslDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLadkwnflvqgdELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
MDSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYEIVEGGEEEEEVIVHEIeeleeeepvdnglsrPLLVEAEWPGLEDKETEHCKKPFIARLFNSIPVISqtnipdfdsmedgTPPTKVVKKIRIVAEHtpirqilqpPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
MDSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPleyyeiveggeeeeevivheieeleeeePVDNGLSRPLLVEAEWPGLEDKETEHCKKPFIARLFNSIPVISQTNIPDFDSMEDGTPPTKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARllvlpligigviylADKWNFLVQGDELYRFVIFLQYTTPsaillaaiaslRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
*******AVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYEIVEG******************************VEAEWPGL****TEHCKKPFIARLFNSIPVISQTNIPDF*********TKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVY*
***GGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYE*****************************************************************************DGTPPTKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
MDSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYEIVEGGEEEEEVIVHEIEE*********GLSRPLLVEAEWPGLEDKETEHCKKPFIARLFNSIPVISQTNIPDFDSMEDGTPPTKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
*****ADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLE**********************************************************************************TPPTKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
oooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoo
oooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooo
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHi
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MDSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYEIxxxxxxxxxxxxxxxxxxxxxEPVDNGLSRPLLVEAEWPGLEDKETEHCKKPFIARLFNSIPVISQTNIPDFDSMEDGTPPTKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGITTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYFNLLLVYA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query430 2.2.26 [Sep-21-2011]
P38355427 Uncharacterized transport yes no 0.8 0.805 0.219 4e-10
O14197452 Uncharacterized transport yes no 0.865 0.823 0.213 1e-08
P54072 576 Uncharacterized transport no no 0.323 0.241 0.312 7e-08
P53932 642 Uncharacterized transport no no 0.576 0.386 0.236 0.0007
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1 Back     alignment and function desciption
 Score = 66.2 bits (160), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 173/419 (41%), Gaps = 75/419 (17%)

Query: 36  VPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVT 95
           +PK++ +I+S L   LF PCLI + L  S+S+        IP+   ++T +  + G  ++
Sbjct: 37  LPKQSQKIISLLNVDLFTPCLIFSKLAKSLSMAKIFEIAIIPIFFGLTTGISFISGKIMS 96

Query: 96  LICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTN-------NPFGSECYDKGVAY 148
            I         F +  + FGN+  +P+S+  S+ +   N       N        +G+ Y
Sbjct: 97  RILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPNLTWDQIPNDNRDNVASRGILY 156

Query: 149 VSFSQWIHVILVYTLVYHMMEPPLEYYEIVE-GGEEEEEVIVHEIEELEEEEPVDNGLSR 207
                    +L++  +  M+     Y ++++  GE  + +   +++ L E  P       
Sbjct: 157 ---------LLIFQQIGQMLRWSWGYNKLMKWSGENTQHMPPSQVQSLLERTP------- 200

Query: 208 PLLVEAEWPGLEDKETEHCKKPFIARLFNSIPVISQTNIPDFDSMEDGTPPTKVVKKIRI 267
                       + + E                 ++ N     S   G    K+ +K   
Sbjct: 201 ------------NIDNEELVNEEQEEQELLEEENNRMNSSFLSSSSIGD---KIWQKSCT 245

Query: 268 VAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSL-DIVAQ---ATV 323
           V E   IR  L PP+++ +FA+++  I  L+      D   GFI ++  + V Q    ++
Sbjct: 246 VFER--IRANLNPPLYSMIFAVVVAAIGPLQRELFMED---GFINNTFAEAVTQLGSVSI 300

Query: 324 PSVMLVLGG----------------ITTVGIVTARLLV-----LPLIGIGVIYLADKWNF 362
           P +++VLG                    +G +  R+++     LP+I I V Y+    N 
Sbjct: 301 PLILVVLGSNLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYI----NV 356

Query: 363 LVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLII 421
            +  D ++  V FL   +P AI L  I  L  +  +E + +LFW   +A+ SL + +I+
Sbjct: 357 SILDDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWG--YAVLSLPVSIIV 413





Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1 Back     alignment and function description
>sp|P54072|YL152_YEAST Uncharacterized transporter YLR152C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR152C PE=1 SV=1 Back     alignment and function description
>sp|P53932|YNJ5_YEAST Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL095C PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query430
359488216451 PREDICTED: uncharacterized protein LOC10 0.967 0.922 0.646 1e-162
147818087451 hypothetical protein VITISV_014264 [Viti 0.967 0.922 0.646 1e-161
224101809437 predicted protein [Populus trichocarpa] 0.958 0.942 0.618 1e-153
224108351449 predicted protein [Populus trichocarpa] 0.958 0.917 0.622 1e-152
255571296451 auxin:hydrogen symporter, putative [Rici 0.960 0.915 0.619 1e-152
357488457453 Transporter, putative [Medicago truncatu 0.967 0.918 0.614 1e-151
356571384445 PREDICTED: uncharacterized protein LOC10 0.962 0.930 0.605 1e-150
224065212440 predicted protein [Populus trichocarpa] 0.958 0.936 0.607 1e-149
225424170436 PREDICTED: uncharacterized protein LOC10 0.953 0.940 0.610 1e-148
449466284453 PREDICTED: uncharacterized transporter C 0.955 0.907 0.576 1e-147
>gi|359488216|ref|XP_003633721.1| PREDICTED: uncharacterized protein LOC100852994 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 292/452 (64%), Positives = 348/452 (76%), Gaps = 36/452 (7%)

Query: 1   MDSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNH 60
           + SGG + ++AV+PL+KLLS+AVIG ++AHPK Q + K TFR+LSKLVFVLFLPCLI  H
Sbjct: 12  VKSGGENWLSAVVPLMKLLSLAVIGLILAHPKLQVMSKATFRLLSKLVFVLFLPCLIFTH 71

Query: 61  LVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYI 120
           L  SI+ KNF+LWWFIPVNV++STA+G +LGY V +IC+PPP+FFRFTIIMTAFGNTG +
Sbjct: 72  LGQSITGKNFVLWWFIPVNVIISTAVGCILGYLVAIICRPPPEFFRFTIIMTAFGNTGNL 131

Query: 121 PLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYEIVEG 180
           PL++V SVCH +  NPFG +C+  GV+YVSF+QW+ VILVYTLVYHMMEPPLEYYEIVE 
Sbjct: 132 PLAIVGSVCH-SAKNPFGPDCHTSGVSYVSFAQWVAVILVYTLVYHMMEPPLEYYEIVEE 190

Query: 181 GEEEEEVIVHEIEELEEEEPVDNGLSRPLLVEAEWPGLEDKETEHCKKPFIARLFNSIPV 240
           G E EEV+              N LSRPLLVEAEWPG+EDKETEHCK PFIAR+F  I  
Sbjct: 191 GNEIEEVV------------TANDLSRPLLVEAEWPGMEDKETEHCKTPFIARIFTRISS 238

Query: 241 ISQTNIPDFDSMEDGTPPT----------KVVKKIRIVAEHTPIRQILQPPVFASLFAIL 290
           IS +  PD  S+E+G P +          KVV++IRIVAE TPI+ ILQPP  ASL AI+
Sbjct: 239 ISPSTFPDVGSVEEGGPISPKSIRCLVEPKVVRRIRIVAEQTPIQHILQPPTVASLLAII 298

Query: 291 IGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGI-------------TTVG 337
           IG+ P LKSF  G DAPL FITDSL I+A A +P V+L+LGG+             T +G
Sbjct: 299 IGMFPQLKSFVFGYDAPLSFITDSLSILAGAAIPFVLLILGGMLAEGPHESKLGIRTVIG 358

Query: 338 IVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAA 397
           I  ARLLVLPLIGIG+I LADK NFLV GD++YRFV+ LQYTTPSAILL AIASLRGYA 
Sbjct: 359 ISVARLLVLPLIGIGIILLADKMNFLVPGDKMYRFVLLLQYTTPSAILLGAIASLRGYAV 418

Query: 398 SEASALLFWQHVFALFSLALYLIIYFNLLLVY 429
           SEASALLFWQHVFA+FSL+LY+IIY+ +LL Y
Sbjct: 419 SEASALLFWQHVFAVFSLSLYIIIYYKVLLPY 450




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818087|emb|CAN64887.1| hypothetical protein VITISV_014264 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224101809|ref|XP_002312429.1| predicted protein [Populus trichocarpa] gi|222852249|gb|EEE89796.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224108351|ref|XP_002314817.1| predicted protein [Populus trichocarpa] gi|222863857|gb|EEF00988.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255571296|ref|XP_002526597.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223534037|gb|EEF35756.1| auxin:hydrogen symporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357488457|ref|XP_003614516.1| Transporter, putative [Medicago truncatula] gi|355515851|gb|AES97474.1| Transporter, putative [Medicago truncatula] Back     alignment and taxonomy information
>gi|356571384|ref|XP_003553857.1| PREDICTED: uncharacterized protein LOC100795484 [Glycine max] Back     alignment and taxonomy information
>gi|224065212|ref|XP_002301719.1| predicted protein [Populus trichocarpa] gi|222843445|gb|EEE80992.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424170|ref|XP_002280374.1| PREDICTED: uncharacterized protein LOC100249273 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449466284|ref|XP_004150856.1| PREDICTED: uncharacterized transporter C5D6.04-like [Cucumis sativus] gi|449503409|ref|XP_004161988.1| PREDICTED: uncharacterized transporter C5D6.04-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query430
TAIR|locus:2026366457 AT1G71090 "AT1G71090" [Arabido 0.960 0.903 0.516 1.2e-113
TAIR|locus:2185123431 AT5G01990 "AT5G01990" [Arabido 0.372 0.371 0.429 8.8e-61
TAIR|locus:2156847395 AT5G65980 "AT5G65980" [Arabido 0.365 0.397 0.331 3.1e-37
TAIR|locus:2053908396 AT2G17500 [Arabidopsis thalian 0.367 0.398 0.304 3.8e-37
TAIR|locus:2011731390 AT1G76520 "AT1G76520" [Arabido 0.358 0.394 0.305 3.5e-32
TAIR|locus:2011746415 AT1G76530 "AT1G76530" [Arabido 0.341 0.354 0.326 1.1e-29
POMBASE|SPAC5D6.04452 SPAC5D6.04 "auxin family trans 0.258 0.245 0.265 1.1e-10
SGD|S000004142 576 YLR152C "Putative protein of u 0.351 0.262 0.301 5.9e-10
SGD|S000000491427 YBR287W "Protein of unknown fu 0.353 0.355 0.242 8.5e-09
UNIPROTKB|Q2KEK0 605 MGCH7_ch7g1036 "Putative uncha 0.360 0.256 0.256 9.2e-08
TAIR|locus:2026366 AT1G71090 "AT1G71090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
 Identities = 233/451 (51%), Positives = 292/451 (64%)

Query:     1 MDSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNH 60
             ++S   D ++ V+PLLKL+ + VIG L+AHPK Q VP+ TFR+LSKLVF LFLPCLI   
Sbjct:     9 VNSRVVDILSGVVPLLKLICLTVIGLLLAHPKTQLVPRATFRLLSKLVFALFLPCLIFTE 68

Query:    61 LVSSISLKNFILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYI 120
             L  SI+L N + WWFIPVNV++S  +G+++GY V LIC+PPP+F RFTI+MTAFGNTG +
Sbjct:    69 LGESITLDNIVQWWFIPVNVLLSAVVGSLIGYLVVLICRPPPEFNRFTIVMTAFGNTGNL 128

Query:   121 PLSVVSSVCHNNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPXXXXXXXXX 180
              L++VSSVCH  TN PFG  C  +GV+YVSF+QW+ VILVYT+VYHMMEPP         
Sbjct:   129 LLAIVSSVCHTKTN-PFGPNCNSRGVSYVSFAQWVAVILVYTVVYHMMEPPLEYYEVVEE 187

Query:   181 XXXXXXXXXXXXXXXXXXXPVDN-GLSRPLLVEAEWPGLEDKETEHCKKPFIARLFNSIP 239
                                 V+N   SRPLLVEAEWPG+EDKETEHCK PFIAR+FNSI 
Sbjct:   188 EGVEIEEIN-----------VENHDASRPLLVEAEWPGIEDKETEHCKTPFIARVFNSIS 236

Query:   240 VISQTNIPDFD-----SMEDGTPPT-------KVVKKIRIVAEHTPIRQILQPPVFASLF 287
               SQT+ P+ D       E  +P +       +V+++IR+VAE TP++ ILQPP  ASL 
Sbjct:   237 SFSQTSFPEVDLGGEYGGESSSPRSIQCLAEPRVMRRIRVVAEQTPVKHILQPPTIASLL 296

Query:   288 AILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGI-------------T 334
             AI+IG +P LKS   G DAPL FITDSL+I+  A VPSVMLVLGG+             T
Sbjct:   297 AIIIGSVPQLKSVVFGYDAPLSFITDSLNIMGSAMVPSVMLVLGGMLSEGPNESTLGLRT 356

Query:   335 TVGIVTARXXXXXXXXXXXXXXADKWNFLVQGDELYRFVIFLQYTTPXXXXXXXXXXXRG 394
             T+GI  AR              ADK   +   D +++FV+ LQY+TP           RG
Sbjct:   357 TIGISVARLLVLPLVGIGIVMSADKLGLISSADPMFKFVLLLQYSTPSAILLGAIASLRG 416

Query:   395 YAASEASALLFWQHVFALFSLALYLIIYFNL 425
             YA  EASALLFWQH+FAL SL  Y++I+F L
Sbjct:   417 YAVREASALLFWQHIFALLSLTFYIVIFFKL 447




GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS
GO:0009926 "auxin polar transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2185123 AT5G01990 "AT5G01990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156847 AT5G65980 "AT5G65980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053908 AT2G17500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011731 AT1G76520 "AT1G76520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011746 AT1G76530 "AT1G76530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPAC5D6.04 SPAC5D6.04 "auxin family transmembrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
SGD|S000004142 YLR152C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
SGD|S000000491 YBR287W "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KEK0 MGCH7_ch7g1036 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00022326001
SubName- Full=Chromosome chr14 scaffold_26, whole genome shotgun sequence; (451 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query430
pfam03547321 pfam03547, Mem_trans, Membrane transport protein 4e-30
pfam03547321 pfam03547, Mem_trans, Membrane transport protein 1e-18
COG0679311 COG0679, COG0679, Predicted permeases [General fun 6e-11
COG0679311 COG0679, COG0679, Predicted permeases [General fun 3e-04
>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein Back     alignment and domain information
 Score =  118 bits (298), Expect = 4e-30
 Identities = 44/182 (24%), Positives = 91/182 (50%), Gaps = 14/182 (7%)

Query: 11  AVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNF 70
            V  +L +  I ++G L    K   +P +    ++KLV    LP LI + + ++++L+  
Sbjct: 2   VVEAVLPVFLIMLLGYLAG--KSGILPPDQASGINKLVVYFALPLLIFSSISTNVTLEMI 59

Query: 71  ILWWFIPVNVVVSTALGAVLGYSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCH 130
           + +W IPV VV+  A+  ++G+ V+ I + P ++    I+ +AF NTG++ L ++ ++  
Sbjct: 60  VDFWLIPVLVVLIVAISLIIGFLVSKIFKLPLEWRGVLILTSAFPNTGFLGLPLLLALYG 119

Query: 131 NNTNNPFGSECYDKGVAYVSFSQWIHVILVYTLVYHMMEPPLEYYEIVEGGEEEEEVIVH 190
                       ++G++Y   S  + VI+++TL Y ++E      +  E   +    +  
Sbjct: 120 ------------EEGLSYAIISVVLGVIIIWTLGYFLIESRGAKRDKSEESGDTSGSMTL 167

Query: 191 EI 192
            I
Sbjct: 168 LI 169


This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life. Length = 321

>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein Back     alignment and domain information
>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 430
KOG2722408 consensus Predicted membrane protein [Function unk 100.0
PF03547385 Mem_trans: Membrane transport protein; InterPro: I 100.0
COG0679311 Predicted permeases [General function prediction o 99.96
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 99.93
PRK09903314 putative transporter YfdV; Provisional 99.91
TIGR00841 286 bass bile acid transporter. Functionally character 96.43
TIGR00841286 bass bile acid transporter. Functionally character 88.76
COG0385 319 Predicted Na+-dependent transporter [General funct 85.42
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 85.28
>KOG2722 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1.3e-102  Score=766.75  Aligned_cols=378  Identities=38%  Similarity=0.744  Sum_probs=329.3

Q ss_pred             hhhHHHHHHHHHhhHHhhcccCCCCChhhhhhhcchhhhhhhhHHHHHhhhhccccccchhhhHHHHHHHHHHHHHHHHH
Q 044639           12 VLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLFLPCLILNHLVSSISLKNFILWWFIPVNVVVSTALGAVLG   91 (430)
Q Consensus        12 ~~Pvlkv~~i~~~G~~lA~~r~~il~~~~~k~ls~lv~~vf~PcLiFskla~sit~~~i~~lw~ipl~~~l~~~iG~~~g   91 (430)
                      +||++|+++|+.+||++|++|.|+|++|+||.+|++||++|+|||+|+|||+++|.+||.+|||||+|++++|++|.++|
T Consensus        14 v~pvlqvl~i~~~G~~lA~~~~~lLp~dark~ln~Lvf~lFtPcLiFs~La~svtl~~ii~~wfiPVnv~Lt~~ig~liG   93 (408)
T KOG2722|consen   14 VMPVLQVLLITLVGFLLASDYVNLLPRDARKLLNKLVFYLFTPCLIFSKLAQSVTLEKIIQWWFIPVNVGLTFIIGSLIG   93 (408)
T ss_pred             cccHHHHHHHHHHHHHHhccccCcCCHHHHHHhhheeeeeecHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhhcCCCCcccceeeEEEecCCcCChhHHHHHHhhcCCCCCCCC--hhhhhhhhHHHHHHHHHHHHhhheeeccccC
Q 044639           92 YSVTLICQPPPQFFRFTIIMTAFGNTGYIPLSVVSSVCHNNTNNPFG--SECYDKGVAYVSFSQWIHVILVYTLVYHMME  169 (430)
Q Consensus        92 ~lv~~i~~~P~~~~~~il~~~~fgN~~~LPia~v~sl~~~~~~~pF~--~~~~~~GvaYi~~~~~l~~i~~wt~~y~~l~  169 (430)
                      |+++|++|+|+++||++++||+|||+||||+++++|+|++ ++.|||  |+|++||++|+++|||+|++++|||+||++.
T Consensus        94 ~lv~~I~rppp~~~~fiia~~a~GN~gnlpL~Lv~alc~~-~~~Pfg~~~~c~s~Gi~Y~sf~~~lg~il~wty~Y~~~~  172 (408)
T KOG2722|consen   94 WLVVKILRPPPQLRGFIIACCAFGNSGNLPLILVPALCDE-DGIPFGNREKCASRGISYVSFSQQLGQILRWTYVYRMLL  172 (408)
T ss_pred             HHHhheecCChhhcCeEEEEeecCCcCCcHHHHhHHHhcc-cCCCCCChhhhhhcchhHHHHHHHhhhhEEEEEEeeeec
Confidence            9999999999999999999999999999999999999999 999999  6899999999999999999999999999999


Q ss_pred             CCch-hhhhhcCCccchhhhhhcccccccccccCCCCCCcccccccCCCCCCCcccccCcccccccccCCCcccCCCCCC
Q 044639          170 PPLE-YYEIVEGGEEEEEVIVHEIEELEEEEPVDNGLSRPLLVEAEWPGLEDKETEHCKKPFIARLFNSIPVISQTNIPD  248 (430)
Q Consensus       170 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (430)
                      ++.. ..+.+++...|...++  .               +      +++.+++++++++++..++..+++.         
T Consensus       173 ~p~~~~~~~~~~~~Ve~~~~~--~---------------~------~~s~e~~~~~~~k~~ll~~~en~~~---------  220 (408)
T KOG2722|consen  173 PPNLELMSALKESPVEALLES--V---------------P------QPSVESDEDSTCKTLLLASKENRNN---------  220 (408)
T ss_pred             CCchhhhhcCChhhhhhhhhc--c---------------C------CCCcccccccccccccccccccCCC---------
Confidence            8753 1111111111110000  0               0      1111223333334443222111100         


Q ss_pred             CCCCCCCCCCcchhhhhhhhhhccccccccCchHHHHHHHHHhhcchhhhhcccCCCCchhhHHHHHHhhccchHHHHHH
Q 044639          249 FDSMEDGTPPTKVVKKIRIVAEHTPIRQILQPPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVML  328 (430)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Pp~~a~ilgiii~~IP~lk~lf~~~~~pL~fi~d~~~~lG~a~VP~~ll  328 (430)
                          ....++.+.+++.+...++.++|++++||++|+++|+++|.|||||+++|++++||++++|++.++|+++|||+++
T Consensus       221 ----~~~g~~~~~~~~~~~~~~~~~L~~i~~Pptia~iiA~vigai~pLr~lifg~~apl~~itdsv~llG~~~IP~ill  296 (408)
T KOG2722|consen  221 ----QVVGREGKVKRRSVSLSEKVILKEIFAPPTIAAIIALVIGAIPPLRRLIFGEDAPLRVITDSVTLLGDGAIPCILL  296 (408)
T ss_pred             ----ceeeccccceEEEeehhHHhhHHHhcCchHHHHHHHHHHhcchHHHHHhhccCchHHHHHHHHHHhccccchhhhh
Confidence                0011344556667777777789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCchhhhHHHhhccChhHHHHHHHHcccCc
Q 044639          329 VLGGI-------------TTVGIVTARLLVLPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGY  395 (430)
Q Consensus       329 lLGan-------------~iv~i~~~RliilPiiGv~iv~~a~k~g~~~~~Dpl~~fV~~L~~~~P~A~~~~~itql~~~  395 (430)
                      +||||             +++|++++||+++|+.|++++..|+|+|.++.|||+|+||++||+++|||+|++++||++|+
T Consensus       297 vLGgnL~~g~~ss~~~~~~iigiii~R~illP~~gl~iv~~A~kl~~ls~~DPlF~~VllLq~~~PpAi~lg~itqL~g~  376 (408)
T KOG2722|consen  297 VLGGNLIQGLRSSALKTSVIIGIIIGRYILLPLVGLGIVRLADKLGLLSTDDPLFQFVLLLQYASPPAINLGTITQLNGV  376 (408)
T ss_pred             hhccccccCchhcccCceEEEEEEEeeeeccchhhHHHHHHHHHhCcCCCCCchhhhhhhhhhcCCchhhHHHHHHHhhh
Confidence            99999             89999999999999999999999999999887999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044639          396 AASEASALLFWQHVFALFSLALYLIIYFNLL  426 (430)
Q Consensus       396 ~q~e~s~iL~~qY~~~~islt~~~t~fl~~~  426 (430)
                      +|+|||++|||+|+++.+++|+|+++|+|++
T Consensus       377 ~e~Ecs~il~W~y~va~l~ltvw~~~f~~lv  407 (408)
T KOG2722|consen  377 AERECSVILFWTYAVASLSLTVWSVFFLWLV  407 (408)
T ss_pred             hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence            9999999999999999999999999999986



>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea Back     alignment and domain information
>COG0679 Predicted permeases [General function prediction only] Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>PRK09903 putative transporter YfdV; Provisional Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query430
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 49/330 (14%), Positives = 108/330 (32%), Gaps = 78/330 (23%)

Query: 2   DSGGADAVNAVLPLLKLLSIAVIGSLIAHPKFQFVPKETFRILSKLVFVLF--LP---CL 56
                D ++A       L          H      P E   +L K +      LP     
Sbjct: 274 FKQVTDFLSAATTTHISLD---------HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 57  ILNHLVSSI--SLKNFILWW--FIPVNVVVSTALGAVLGYSVTLICQPPP----QFFRFT 108
                +S I  S+++ +  W  +  VN      L  ++  S+      P      F R +
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVN---CDKLTTIIESSLN--VLEPAEYRKMFDRLS 379

Query: 109 IIMTAFGNTGYIPLSVVSSV-CHNNTNNP--FGSECYDKGVA---YVSFSQWIHVILVYT 162
           +    F  + +IP  ++S +      ++     ++ +   +        +  I  I +  
Sbjct: 380 V----FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 163 LVYHMMEPPL-----EYYEIVEGGEEEEEV-----------IVHEIEELEEEEPVDNGLS 206
            V    E  L     ++Y I +  + ++ +           I H ++ +E  E +   L 
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT--LF 493

Query: 207 RPLLVEAEWPGLEDKETEHCKKPFIAR--LFNSIPVIS------QTNIPDFDSMEDG--- 255
           R + ++  +  LE K   H    + A   + N++  +         N P ++ + +    
Sbjct: 494 RMVFLDFRF--LEQK-IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILD 550

Query: 256 ---TPPTKVVKKIRIVAEHTPIRQI-LQPP 281
                   ++      +++T + +I L   
Sbjct: 551 FLPKIEENLIC-----SKYTDLLRIALMAE 575


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query430
3zux_A 332 Transporter, ASBTNM; transport protein, membrane p 95.98
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
Probab=95.98  E-value=0.042  Score=54.40  Aligned_cols=124  Identities=10%  Similarity=-0.037  Sum_probs=89.7

Q ss_pred             chHHHHHHHHHhhcchhhhhcccCCCCchhhHHHHHHhhccchHHHHHHHHhHH--------------HHHHHHHHHHHH
Q 044639          280 PPVFASLFAILIGIIPGLKSFAVGSDAPLGFITDSLDIVAQATVPSVMLVLGGI--------------TTVGIVTARLLV  345 (430)
Q Consensus       280 Pp~~a~ilgiii~~IP~lk~lf~~~~~pL~fi~d~~~~lG~a~VP~~lllLGan--------------~iv~i~~~Rlii  345 (430)
                      +-.+.++++.++|..=|=..-      .++       ..-..++.++++..|.+              ......+.++++
T Consensus        19 ~~~l~i~~~~~lg~~~P~~~~------~~~-------~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi   85 (332)
T 3zux_A           19 TFSLWAALFAAAAFFAPDTFK------WAG-------PYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAI   85 (332)
T ss_dssp             THHHHHHHHHHHHHHCGGGTG------GGG-------GGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcchhhh------hhH-------HHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            446777777777765331100      111       12235788999999999              344558899999


Q ss_pred             HHHHHHHHHHHhhhcCccccCCchhhhHHHhhccChhHHHHHHHHcccCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 044639          346 LPLIGIGVIYLADKWNFLVQGDELYRFVIFLQYTTPSAILLAAIASLRGYAASEASALLFWQHVFALFSLALYLIIYF  423 (430)
Q Consensus       346 lPiiGv~iv~~a~k~g~~~~~Dpl~~fV~~L~~~~P~A~~~~~itql~~~~q~e~s~iL~~qY~~~~islt~~~t~fl  423 (430)
                      +|+++.++....   +    .||.+...+++..++|++.+...+|++.+-...-+...-..+=.++++++|+|..+++
T Consensus        86 ~Pll~~~l~~~~---~----l~~~~~~Glil~~~~P~~~~s~v~t~~a~Gd~~la~~~~~~stll~~~~~Pl~~~l~~  156 (332)
T 3zux_A           86 MPATAWCLSKLL---N----LPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLA  156 (332)
T ss_dssp             HHHHHHHHHHHT---T----CCHHHHHHHHHHHHSCCCTHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh---C----CChHHHHHHHHHhcCCchhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999866532   2    5899999999999999999988889886633233455567888899999999988876




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00