Citrus Sinensis ID: 044658

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
Protein Sequence
MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPVAMDSSKP
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEccccccccccccccccccHHHHHHHHHHccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHEEEEHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccHHHccccHccccccccccccccccccccc
Coil and Loop (DISEMBL)
mdccrqwkPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYfwerksrpkltvpILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALtltlykgkpfylgatnhmtndvntmnsskkaddwaIGSIVLIAFTVVWSSWFLIQARigkkypckysSTAIMALFGAIQSAVLSLIVErnpagwamkgkLEIITIIYSGVVGSGLCYVGMAWcveqrgpvftsaftPLIQIFVAIVGFFILheriypgsvVGSIIVVIGLYILLWGkskeidecqgmkqaqlapqdghfdavspshvipvamdsskp
Flexible Loop (DISEMBL)
MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPVAMDSSKP
Low Complexity Region (SEG)
MDCCRQWKPIIMMvavnlglaaanallkkilDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPgsvvgsiivvigLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPVAMDSSKP
Disordered region (IsUnstruct)
**CCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTM****KADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVE*************IQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKEIDEC*********************************
Disordered Region (DISOPRED)
*****QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGAT******************WAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW******************************************
Disordered Region (DISEMBL)
MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPVAMDSSKP
Disordered Region (DISPRO)
*DCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGAT****************DDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKE*************************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPVAMDSSKP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	364	2.2.26 [Sep-21-2011]
Q9LI65	364	WAT1-related protein At3g	yes	no	0.912	0.912	0.528	1e-106
Q9M130	365	WAT1-related protein At4g	no	no	0.903	0.901	0.525	1e-100
Q9M129	361	WAT1-related protein At4g	no	no	0.892	0.900	0.493	2e-78
Q5XEZ0	365	WAT1-related protein At1g	no	no	0.953	0.950	0.413	4e-76
Q9M131	365	WAT1-related protein At4g	no	no	0.967	0.964	0.385	8e-72
Q500Z4	352	WAT1-related protein At1g	no	no	0.923	0.954	0.401	2e-69
F4I8W6	337	WAT1-related protein At1g	no	no	0.887	0.958	0.406	7e-69
Q8GXB4	374	WAT1-related protein At1g	no	no	0.868	0.844	0.379	5e-66
Q9FL41	402	WAT1-related protein At5g	no	no	0.868	0.786	0.380	6e-64
Q9SUF1	384	WAT1-related protein At4g	no	no	0.892	0.846	0.355	1e-61

>sp|Q9LI65|WTR24_ARATH WAT1-related protein At3g30340 OS=Arabidopsis thaliana GN=At3g30340 PE=2 SV=1

 Score =  386 bits (991), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/339 (52%), Positives = 242/339 (71%), Gaps = 7/339 (2%)

Query: 5   RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR 64
           + WK ++MM  +N+GL+  N + KK++D GLN +V   YR  + T+FL P A F ER +R
Sbjct: 7   KLWKAVLMMSMINIGLSVVNVMFKKMIDEGLNRMVATTYRLAVGTLFLIPFAIFLERHNR 66

Query: 65  PKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEK 124
           PKLT  ILC LFFSAL G +L QYFFL+G EYT++ FS AF N+VP  TF LAL FR E 
Sbjct: 67  PKLTGRILCSLFFSALLGTSLVQYFFLIGLEYTSSTFSLAFSNMVPSVTFALALVFRQET 126

Query: 125 LNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIG 184
           LN+KS  GR+K+LG ++CI GAL LTLYKG       + HM     T ++      WA+G
Sbjct: 127 LNIKSNVGRAKLLGTMICICGALVLTLYKGTALSREHSTHMETHTRTDSTGAMTQKWAMG 186

Query: 185 SIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMK 244
           SI+L+   ++WSSWF++QA+I + YPC+Y+ST I++ FG IQSA+LSLI ER+ + W +K
Sbjct: 187 SIMLVISIIIWSSWFIVQAKISRVYPCQYTSTTILSFFGVIQSALLSLISERSTSMWVVK 246

Query: 245 GKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYP 304
            K +++ ++YSG+VGSGLCYVGM+WC+ QRG VFTS+F PLIQ+F AI  F  LHE+IY 
Sbjct: 247 DKFQVLALLYSGIVGSGLCYVGMSWCLRQRGAVFTSSFIPLIQVFAAIFSFSFLHEQIYC 306

Query: 305 GSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQD 343
           GSV+GS+++++GLYILLWGKSK+       K A +  Q+
Sbjct: 307 GSVIGSMVIIVGLYILLWGKSKD-------KSASVTKQE 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M130|WTR29_ARATH WAT1-related protein At4g01440 OS=Arabidopsis thaliana GN=At4g01440 PE=2 SV=1

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/331 (52%), Positives = 238/331 (71%), Gaps = 2/331 (0%)

Query: 3   CCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERK 62
           C  +W P+I+MV +N  L  ANAL+KK+LDGG+NH+VI  YR  I+T+FLAP+A+FWERK
Sbjct: 4   CDGKWTPVIIMVMINSALGLANALVKKVLDGGVNHMVIATYRLAISTLFLAPIAFFWERK 63

Query: 63  SRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRL 122
           +RP LT+ IL QLFFSAL G +L QYFFLLG  YT+A  +CAFI++ P  TF++AL FR+
Sbjct: 64  TRPTLTLNILVQLFFSALVGASLTQYFFLLGLSYTSATLACAFISMTPAITFVMALIFRV 123

Query: 123 EKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWA 182
           EKLNMKS  G   V+GA++CIGGAL LT+YKG P         T+ +   N + K ++W 
Sbjct: 124 EKLNMKSKAGMGMVMGALICIGGALLLTMYKGVPLT-KLRKLETHQLINNNHAMKPENWI 182

Query: 183 IGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWA 242
           IG ++L A +  + SW LIQA++ +KYPC+YSST +++ FG IQ A+LSLI  R+   W 
Sbjct: 183 IGCVLLFAGSSCFGSWMLIQAKVNEKYPCQYSSTVVLSFFGTIQCALLSLIKSRDITAWI 242

Query: 243 MKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERI 302
           +  KL+I+TI+Y+G V  G+C VG +WC+ +RGP+FTS FTP+  IF  +  F ILH +I
Sbjct: 243 LTDKLDIVTIVYAGAVAQGICTVGTSWCIRKRGPIFTSIFTPVGLIFATLFDFLILHRQI 302

Query: 303 YPGSVVGSIIVVIGLYILLWGKSKEI-DECQ 332
           + GSVVGS +V+ GLYI L GK + + +EC+
Sbjct: 303 FLGSVVGSGVVIFGLYIFLLGKVRLMKEECE 333

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M129|WTR30_ARATH WAT1-related protein At4g01450 OS=Arabidopsis thaliana GN=At4g01450 PE=2 SV=1

 Score =  292 bits (748), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 163/330 (49%), Positives = 229/330 (69%), Gaps = 5/330 (1%)

Query: 6   QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
           +W P+I+++  N+     NAL+KK+LDGG+NH+VI  YR  I+T+FL PVAYFWERK+RP
Sbjct: 7   KWAPMIVLIVSNMIAGMVNALVKKVLDGGINHMVIATYRLGISTLFLLPVAYFWERKTRP 66

Query: 66  KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
           KLT+ I CQLF SAL G +L QYF+LLG  YT+A    AF  I+P  TF++AL F  EKL
Sbjct: 67  KLTLSISCQLFVSALFGASLMQYFYLLGLSYTSATLGSAFWAIMPSLTFVMALIFGFEKL 126

Query: 126 NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGS 185
           ++K+  G   VLG ++ + G L LT+Y+G P     TN      N+ N+    ++W  G 
Sbjct: 127 SLKTKIGYGVVLGTLISLVGGLLLTMYQGIPL----TNSPEQAANS-NNHTGHENWIKGC 181

Query: 186 IVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKG 245
             L+   V++SSW LIQA+I  KYPC YSST I+++FG +Q A+LSLI  R+   W ++ 
Sbjct: 182 FFLLTGVVLFSSWMLIQAKINVKYPCPYSSTVILSVFGTLQCALLSLIKTRHLEDWILRD 241

Query: 246 KLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPG 305
           +L IIT++ +GVV  G+C VGM+WC++Q+GPV +S+F+P++ +   +  F ILH  IY G
Sbjct: 242 ELTIITVVIAGVVAQGMCTVGMSWCIKQQGPVVSSSFSPVVLMSATVFDFLILHREIYLG 301

Query: 306 SVVGSIIVVIGLYILLWGKSKEIDECQGMK 335
           SV+GS++VVIGLYI LW +SK+I EC+ MK
Sbjct: 302 SVIGSVVVVIGLYIFLWSRSKQIVECKIMK 331

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XEZ0|WTR1_ARATH WAT1-related protein At1g01070 OS=Arabidopsis thaliana GN=At1g01070 PE=2 SV=1

 Score =  285 bits (729), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 146/353 (41%), Positives = 210/353 (59%), Gaps = 6/353 (1%)

Query: 5   RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR 64
            ++ P+I+MV  N+ + + NAL+KK LD G+NH+VI AYR  I+ + L P AY  ERK+R
Sbjct: 12  EKYSPVIVMVMSNVAMGSVNALVKKALDVGVNHMVIGAYRMAISALILVPFAYVLERKTR 71

Query: 65  PKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEK 124
           P++T  ++   F S L G +L Q+FFLLG  YT+A  SCA ++++P  TF LAL FR E 
Sbjct: 72  PQITFRLMVDHFVSGLLGASLMQFFFLLGLSYTSATVSCALVSMLPAITFALALIFRTEN 131

Query: 125 LN-MKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAI 183
           +  +K+  G  KV+G ++CI GAL LT YKG       ++      +  N   KA++W +
Sbjct: 132 VKILKTKAGMLKVIGTLICISGALFLTFYKGPQISNSHSHSHGGASHNNNDQDKANNWLL 191

Query: 184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAM 243
           G + L   TV+ S W L Q  +  KYPCKYSST +M++F A Q A+LSL   R+   W +
Sbjct: 192 GCLYLTIGTVLLSLWMLFQGTLSIKYPCKYSSTCLMSIFAAFQCALLSLYKSRDVNDWII 251

Query: 244 KGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIY 303
             +  I  IIY+GVVG  +  V   W +++ G VF SAF PL  I   +  F ILH  +Y
Sbjct: 252 DDRFVITVIIYAGVVGQAMTTVATTWGIKKLGAVFASAFFPLTLISATLFDFLILHTPLY 311

Query: 304 PGSVVGSIIVVIGLYILLWGKSKEIDECQGM-----KQAQLAPQDGHFDAVSP 351
            GSV+GS++ + GLY+ LWGK+KE +    +      +AQ    +   D+ SP
Sbjct: 312 LGSVIGSLVTITGLYMFLWGKNKETESSTALSSGMDNEAQYTTPNKDNDSKSP 364

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M131|WTR28_ARATH WAT1-related protein At4g01430 OS=Arabidopsis thaliana GN=At4g01430 PE=2 SV=1

 Score =  271 bits (692), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 142/368 (38%), Positives = 218/368 (59%), Gaps = 16/368 (4%)

Query: 5   RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR 64
            QW P+I+M+  ++ + + NAL+KK LD G+NH++  AYR  I+ + L P +Y WERK+R
Sbjct: 5   EQWAPVIVMLISSVAMGSVNALVKKALDVGVNHMIFGAYRMAISALILVPFSYIWERKTR 64

Query: 65  PKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEK 124
           P+LT  +LC+ F S L G +L Q+FFLLG  YT+A  S A ++++P  TF LAL FR+E 
Sbjct: 65  PQLTFMLLCEHFISGLLGASLMQFFFLLGLSYTSATVSMALVSMLPAITFALALIFRIEN 124

Query: 125 L-NMKSLDGRSKVLGAIVCIGGALTLTLYKG----KPFYLGATNHMTNDVNTMNSSKKAD 179
             N+KS  G  KV+G ++CI GA+ LT YKG     P       H  N+ N  + +KK  
Sbjct: 125 AQNLKSKAGVLKVMGTLICIMGAMLLTFYKGPELSNPHSHPQARHNNNNNNGHDQTKK-- 182

Query: 180 DWAIGSIVLIAFTVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVERNP 238
            W +G + L+  TV+ S W L Q ++  KYP  KYSST +M++F + Q A+LSL   R+ 
Sbjct: 183 -WLLGCLYLVIGTVLLSLWMLFQGKLSFKYPGNKYSSTCLMSVFASFQCAILSLYKSRDV 241

Query: 239 AGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFIL 298
             W ++ K  I+  +Y+G+VG  +  V  +W ++  G VF S F+P+  +   +  F IL
Sbjct: 242 KDWIIEDKFVILVTLYAGIVGQAMSTVVTSWSIKMTGAVFVSTFSPVSLVAATLFDFLIL 301

Query: 299 HERIYPGSVVGSIIVVIGLYILLWGKSKEIDE--CQGMKQAQLAPQDGHFDAVSPSHVIP 356
           H  +Y GS++GS++ + GLY+ LWG+  E D+   + +  +Q +    + D     H I 
Sbjct: 302 HSPLYLGSILGSVVTITGLYVFLWGRKNETDQSVSKTLNSSQFSQNKDNED-----HTIA 356

Query: 357 VAMDSSKP 364
              D++ P
Sbjct: 357 NHKDTNLP 364

Arabidopsis thaliana (taxid: 3702)

>sp|Q500Z4|WTR3_ARATH WAT1-related protein At1g11450 OS=Arabidopsis thaliana GN=At1g11450 PE=2 SV=2

 Score =  263 bits (672), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 203/339 (59%), Gaps = 3/339 (0%)

Query: 6   QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
           +W P+I+MV   + + + NAL+KK LD G+NH++I AYR  I++  L P+AYF ERK  P
Sbjct: 13  KWPPMIVMVTSQVAMGSVNALVKKALDVGVNHMIIGAYRMAISSFILVPIAYFLERKIIP 72

Query: 66  KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
           K+T  ++   F S L G +L Q+F+LLG  YT+A  +CA ++++P  TF  AL  R EK+
Sbjct: 73  KITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALILRTEKI 132

Query: 126 -NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIG 184
            ++K+  G  KV+G ++CI GAL LT YKG P    + +H+   +   NS     +W +G
Sbjct: 133 KDLKTQAGMIKVMGTLICISGALFLTFYKG-PHISNSHSHL-EALPHNNSDHNTKNWLLG 190

Query: 185 SIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMK 244
            + L+   V+ S W L Q  +  KYPCK+SST +M++F A Q A+LSL   R+   W + 
Sbjct: 191 CLYLVIGIVLLSLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRDLKHWIID 250

Query: 245 GKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYP 304
               I  IIY+GV+G  +  V   W + + G VF SA  P+  I   +  F ILH  +Y 
Sbjct: 251 DGFVIGVIIYAGVIGQAMSTVAATWGINRLGAVFASAIMPVSLISATLFDFLILHTPLYL 310

Query: 305 GSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQD 343
           GSV+GS+  +IGLY+ LWGK+KE +       +++  +D
Sbjct: 311 GSVIGSVGTIIGLYVFLWGKNKETEADITTLSSRMNNED 349

Arabidopsis thaliana (taxid: 3702)

>sp|F4I8W6|WTR4_ARATH WAT1-related protein At1g11460 OS=Arabidopsis thaliana GN=At1g11460 PE=3 SV=1

 Score =  261 bits (666), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 132/325 (40%), Positives = 201/325 (61%), Gaps = 2/325 (0%)

Query: 6   QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
           +W PII+MV   + + + NAL+KK LD G+NH++I AYR  I++  LAP+AY  ER+  P
Sbjct: 13  KWPPIIVMVISQVAMGSVNALVKKALDVGVNHMIIGAYRIAISSFILAPIAYILEREIIP 72

Query: 66  KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
           ++T  ++   F S L G +L Q+F+LLG  YT+A  +CA ++++P  TF  AL  R EK+
Sbjct: 73  EITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALILRTEKI 132

Query: 126 -NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIG 184
            ++++  G  KV+G I+CI GAL LT YKG P    + +H     +  NS     +W +G
Sbjct: 133 KSLRTQAGMIKVMGTIICISGALFLTFYKG-PHISNSHSHQEALPHNNNSDHNTKNWLLG 191

Query: 185 SIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMK 244
            + L   TV+ S W L Q  +  KYPCK+SST +M++F A Q A+LSL   R+   W + 
Sbjct: 192 CLYLTIGTVLISLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRDVKDWIID 251

Query: 245 GKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYP 304
            +  I  I+Y+GV+G  +  V + W V++ G VF SA  P+  I  ++  F ILH  +Y 
Sbjct: 252 DRFVIGVIVYAGVIGQAMSTVSVTWGVKKLGAVFVSAIMPIALISASLFDFIILHTPLYL 311

Query: 305 GSVVGSIIVVIGLYILLWGKSKEID 329
           GS++GS+  + GLY+ LWGK+K+++
Sbjct: 312 GSLIGSVGTITGLYVFLWGKNKDME 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXB4|WTR2_ARATH WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380 PE=2 SV=1

 Score =  251 bits (641), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 200/319 (62%), Gaps = 3/319 (0%)

Query: 9   PIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLT 68
           P + MV V +G A  N   K  ++ G+  L++VAYRQI ATI   PVA+F ERK+RPK+T
Sbjct: 8   PFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERKTRPKIT 67

Query: 69  VPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMK 128
           + IL Q+FF ++TG T  Q  + +G + ++   +CA  N++P  TFLLA  FR E + +K
Sbjct: 68  LRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIFRQETVGIK 127

Query: 129 SLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATN---HMTNDVNTMNSSKKADDWAIGS 185
              G++KV+G +VC+ GA+ L+ Y G    +G +        ++    SS    ++ +G 
Sbjct: 128 KASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKHGSSSGHSNFFLGP 187

Query: 186 IVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKG 245
            +++A  V W++WF+IQ ++ + +   Y+ST +M L G+IQ   ++LI +   + W++  
Sbjct: 188 FLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHTISDWSLSS 247

Query: 246 KLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPG 305
            L  I+ +Y+GVV S L +  M+W ++++GP++ S F+PL+ + VAI  + +L E++Y G
Sbjct: 248 PLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEKLYTG 307

Query: 306 SVVGSIIVVIGLYILLWGK 324
           + +GS +VVIGLY +LWGK
Sbjct: 308 TFMGSALVVIGLYGVLWGK 326

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  244 bits (624), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 205/331 (61%), Gaps = 15/331 (4%)

Query: 8   KPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKL 67
           KP   M+++  G A  N + K  L+ G++H V+V YR  IAT  +AP A+F+ERK++PK+
Sbjct: 17  KPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKI 76

Query: 68  TVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNM 127
           T  I  QLF   L G  + Q F+ +G +YT+  FSCA  N++P  TF+LA+ FR+E L++
Sbjct: 77  TFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDL 136

Query: 128 KSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKK---------- 177
           K L  ++K+ G +V + GA+ +T+YKG    L  T +M    +  +SS            
Sbjct: 137 KKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYM----HIQDSSHANTTSSKNSSS 192

Query: 178 ADDWAIGSIVLIAFTVVWSSWFLIQARIGKKY-PCKYSSTAIMALFGAIQSAVLSLIVER 236
             ++  GSI+LI  T+ W+S F++QA+I K Y   + S T ++   G +Q+  ++ ++E 
Sbjct: 193 DKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEH 252

Query: 237 NPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFF 296
           NP+ W +   + ++   YSG+V S + Y      +++RGPVF +AF+PL+ + VA++G F
Sbjct: 253 NPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSF 312

Query: 297 ILHERIYPGSVVGSIIVVIGLYILLWGKSKE 327
           +L E+I+ G V+G++++VIGLY +LWGK KE
Sbjct: 313 VLAEKIFLGGVIGAVLIVIGLYAVLWGKQKE 343

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 201/326 (61%), Gaps = 1/326 (0%)

Query: 5   RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR 64
            + +P ++M+ +  G A    ++   L+ G N  V++ YR ++A + LAP A  +ERK R
Sbjct: 9   HKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVR 68

Query: 65  PKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEK 124
           PK+T+ +L ++         L Q F  LG   T+A ++ A +NI+P  TF++A   R+EK
Sbjct: 69  PKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEK 128

Query: 125 LNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATN-HMTNDVNTMNSSKKADDWAI 183
           +N+  +  ++K++G +V +GGAL +TLYKG    L  +N +M       N+S+  ++W +
Sbjct: 129 VNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVV 188

Query: 184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAM 243
           G+++++   V WS ++++Q+   K YP   S +A++ L GA+QS  ++L+VER+P+GWA+
Sbjct: 189 GTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAV 248

Query: 244 KGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIY 303
                +   +Y+G+V SG+ Y      ++ RGPVF +AF PL  I VA++  FILHE+I+
Sbjct: 249 GWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIH 308

Query: 304 PGSVVGSIIVVIGLYILLWGKSKEID 329
            G V+G  ++  GLY+++WGK K+ +
Sbjct: 309 FGCVIGGAVIAAGLYMVVWGKGKDYE 334

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
255548133	402	Auxin-induced protein 5NG4, putative [Ri	0.961	0.870	0.584	1e-116
224068242	364	predicted protein [Populus trichocarpa]	0.975	0.975	0.559	1e-114
356530252	502	PREDICTED: auxin-induced protein 5NG4-li	0.961	0.697	0.552	1e-114
359473602	362	PREDICTED: auxin-induced protein 5NG4-li	0.972	0.977	0.576	1e-114
297738438	573	unnamed protein product [Vitis vinifera]	0.980	0.623	0.566	1e-113
225425442	350	PREDICTED: auxin-induced protein 5NG4-li	0.939	0.977	0.593	1e-113
224130726	359	predicted protein [Populus trichocarpa]	0.934	0.947	0.576	1e-112
225426479	368	PREDICTED: auxin-induced protein 5NG4 [V	0.920	0.910	0.564	1e-110
356576955	385	PREDICTED: auxin-induced protein 5NG4-li	0.950	0.898	0.545	1e-109
297742491	748	unnamed protein product [Vitis vinifera]	0.920	0.447	0.564	1e-109

>gi|255548133|ref|XP_002515123.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223545603|gb|EEF47107.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/351 (58%), Positives = 261/351 (74%), Gaps = 1/351 (0%)

Query: 1   MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWE 60
           M C  Q K ++ M+ VN   AA N LLKK++DGG NH+ IV YR  IA IFLAP+A + E
Sbjct: 40  MSCREQSKTVLAMLFVNFSFAAVNILLKKVIDGGTNHMAIVTYRLSIAAIFLAPIACYCE 99

Query: 61  RKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPF 120
           RK+RP++   ILC LF  AL GVTL QY FLLG EYT+  FSCAF+N+VPV+TF+LALPF
Sbjct: 100 RKTRPRIPFKILCYLFLGALVGVTLTQYLFLLGLEYTSTTFSCAFLNMVPVNTFILALPF 159

Query: 121 RLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKAD- 179
            LEK+N+KS  GR+K+LGA +C+ GA+ LT+YKG P     +  + N V  M + KK   
Sbjct: 160 GLEKVNVKSKAGRAKLLGATICMTGAILLTVYKGIPLTHPHSGDLKNHVAAMMTEKKRHR 219

Query: 180 DWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPA 239
            W +GSI L+A  V WSSWFLIQA+IGK YPCKYSSTAI++ F AIQ+AV++LI  RN  
Sbjct: 220 SWVLGSIFLMAGCVAWSSWFLIQAKIGKTYPCKYSSTAILSSFAAIQAAVVTLIFNRNVT 279

Query: 240 GWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILH 299
            W +KGKLEIITI+Y+GVVGSGLCYVGM+WCV++RGPVFT+AFTP  QIF A+  F +LH
Sbjct: 280 VWVLKGKLEIITIVYAGVVGSGLCYVGMSWCVKERGPVFTAAFTPFTQIFAAMFDFSVLH 339

Query: 300 ERIYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVS 350
           ++IY GSV+GSI+V+ GLY LLWGKS E +EC   +++ +  +DG+ D  S
Sbjct: 340 DQIYLGSVIGSILVIAGLYTLLWGKSIEAEECAMKQKSVVVKRDGNSDVES 390

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068242|ref|XP_002302687.1| predicted protein [Populus trichocarpa] gi|222844413|gb|EEE81960.1| predicted protein [Populus trichocarpa]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/363 (55%), Positives = 260/363 (71%), Gaps = 8/363 (2%)

Query: 6   QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
           QWKP++ MV VN   A  N L KKILD G N +VI  YR   + IFLAPV+Y+WERKSRP
Sbjct: 6   QWKPVVGMVVVNFAFAIVNVLFKKILDEGTNSMVIATYRLSTSAIFLAPVSYYWERKSRP 65

Query: 66  KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
           +LT  I C LF  AL G+TL QY FL G EY +A F+CAF+N VPV+TF+LAL F +EK 
Sbjct: 66  RLTASIFCHLFLGALFGLTLTQYLFLKGLEYISATFACAFLNTVPVNTFILALLFGIEKA 125

Query: 126 NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFY----LGATNHMTNDVNTMNSSKKADDW 181
           +M S  GR+KVLGA++C+GGA+ L  YKG P        AT  + N  +TM S KK   W
Sbjct: 126 SMTSKAGRTKVLGALICMGGAVLLIFYKGIPLTNSHSRAATTDILNHADTMISGKKRQRW 185

Query: 182 AIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGW 241
            +GSI+ +A    WS WFLIQA+I K YP +YSSTA+M+  GA+QSA+LSL +ERN + W
Sbjct: 186 VVGSILSLAGCFTWSLWFLIQAKISKSYPFQYSSTALMSFLGAVQSAILSLSIERNFSMW 245

Query: 242 AMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHER 301
            ++ KLEII+++Y+G++GSGLCYVGM+WCV++RGPVFTSAFTP  QIF A++ F ILHE+
Sbjct: 246 ILRTKLEIISVLYAGIIGSGLCYVGMSWCVKRRGPVFTSAFTPFTQIFAAMLDFSILHEQ 305

Query: 302 IYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPVAMDS 361
           IY GSV+GS++V++GLYILLWGKS E  +C G KQA LA ++ H D  +    IP  +  
Sbjct: 306 IYLGSVLGSVLVILGLYILLWGKSIEAGDC-GEKQAHLAREEEHRDTEAQ---IPATISR 361

Query: 362 SKP 364
           S P
Sbjct: 362 SNP 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530252|ref|XP_003533696.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/355 (55%), Positives = 266/355 (74%), Gaps = 5/355 (1%)

Query: 7   WKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPK 66
           WKP+++M+ VNL LA  N  LKK+L+ G+++L I+ YRQ I+ IFL P+A F+ER+ RP 
Sbjct: 10  WKPVLVMIIVNLALAFVNIFLKKVLNEGVDYLTILTYRQAISAIFLTPIACFYERQKRPS 69

Query: 67  LTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLN 126
           +   I+C LF SAL GVTL QY +L+G EYT+A F+CAF+N+VPV TF++ALP  +EK+N
Sbjct: 70  MAGHIICLLFLSALVGVTLTQYLYLIGLEYTSATFACAFLNMVPVFTFIMALPLGIEKVN 129

Query: 127 MKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSI 186
           MK L  ++KVLG  VCIGGAL L LYKG P       H+ +     +S+ K   W IGS+
Sbjct: 130 MKKLSAKAKVLGTFVCIGGALMLILYKGVPLINQQPEHIADKGTIRSSASKLKKWIIGSL 189

Query: 187 VLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGK 246
           +L A   +WSSWFLIQA I KKYPC+YSSTAI++ F +IQSA+L+L+++R+ A W +KGK
Sbjct: 190 LLTAGCFLWSSWFLIQASISKKYPCQYSSTAILSFFASIQSAILTLVIDRSNAKWILKGK 249

Query: 247 LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGS 306
           LEI+T++Y+G+VGSGLCYV M+WCV+QRGPVFTSAFTPL+Q+FVA++ F ILHE IY GS
Sbjct: 250 LEIMTVVYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILHEEIYLGS 309

Query: 307 VVGSIIVVIGLYILLWGKSKEIDEC--QGMKQAQLAPQ-DGHFDAVS--PSHVIP 356
           V GS++V+ G YILLWGKSKE ++C  +G +++Q   +   + +A S  PS + P
Sbjct: 310 VAGSVLVISGTYILLWGKSKEEEQCAVKGTQESQEDEECKNNLEASSNVPSKLRP 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473602|ref|XP_002272440.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/361 (57%), Positives = 270/361 (74%), Gaps = 7/361 (1%)

Query: 1   MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWE 60
           M+C  Q K +  MVAVN  ++ AN L+K ILD G NHLV++ YRQ I+T+F++ VA+F E
Sbjct: 1   MNCHEQLKTVAAMVAVNFAISVANVLIKMILDQGANHLVVITYRQSISTVFISAVAFFLE 60

Query: 61  RKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPF 120
           RKSRPKLT  ILC +F SAL G TL QYFFLLG +YT+A FSCAFIN+VP  TF+LAL F
Sbjct: 61  RKSRPKLTFRILCHIFASALLGATLTQYFFLLGLKYTSATFSCAFINLVPAITFILALVF 120

Query: 121 RLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPF----YLGATNHMTNDVNTMNSSK 176
           +LEK+N+ S  GR+KVLG  +CI GAL L LY+G P     Y  A    T+   T  SS 
Sbjct: 121 KLEKVNLGSKCGRAKVLGTFICICGALLLGLYRGMPLTNPAYPQAEIPGTSHAKTSISSH 180

Query: 177 KADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVER 236
           +   WA GS+VL A ++ WSSWFL+QA I KKYPC+YSSTAI++ F A Q+A+LS I++R
Sbjct: 181 RTKSWATGSMVLTAASLTWSSWFLLQAGISKKYPCQYSSTAILSFFSATQAAILSSILDR 240

Query: 237 NPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFF 296
           + + W +KGKLEI ++I++G+VGSGLCY  M+WCV ++GPVFT+AFTP IQIFVAI  F 
Sbjct: 241 DLSSWILKGKLEISSVIFAGIVGSGLCYGLMSWCVNKKGPVFTAAFTPFIQIFVAIFDFS 300

Query: 297 ILHERIYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIP 356
           ILHE+I+ GSV+GSI+V+ GLYILLWGKSKE ++C  MKQ+Q+A +D   D ++P  V+P
Sbjct: 301 ILHEQIHLGSVLGSILVIAGLYILLWGKSKEEEDCV-MKQSQVAEEDPECD-MAP-QVVP 357

Query: 357 V 357
           +
Sbjct: 358 I 358

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738438|emb|CBI27639.3| unnamed protein product [Vitis vinifera]

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/362 (56%), Positives = 267/362 (73%), Gaps = 5/362 (1%)

Query: 1   MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWE 60
           M+C  Q K +  MVAVN  ++ AN L+K ILD G NHLV++ YRQ I+T+F++ VA+F E
Sbjct: 1   MNCHEQLKTVAAMVAVNFAISVANVLIKMILDQGANHLVVITYRQSISTVFISAVAFFLE 60

Query: 61  RKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPF 120
           RKSRPKLT  ILC +F SAL G TL QYFFLLG +YT+A FSCAFIN+VP  TF+LAL F
Sbjct: 61  RKSRPKLTFRILCHIFASALLGATLTQYFFLLGLKYTSATFSCAFINLVPAITFILALVF 120

Query: 121 RLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPF----YLGATNHMTNDVNTMNSSK 176
           +LEK+N+ S  GR+KVLG  +CI GAL L LY+G P     Y  A    T+   T  SS 
Sbjct: 121 KLEKVNLGSKCGRAKVLGTFICICGALLLGLYRGMPLTNPAYPQAEIPGTSHAKTSISSH 180

Query: 177 KADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVER 236
           +   WA GS+VL A ++ WSSWFL+QA I KKYPC+YSSTAI++ F A Q+A+LS I++R
Sbjct: 181 RTKSWATGSMVLTAASLTWSSWFLLQAGISKKYPCQYSSTAILSFFSATQAAILSSILDR 240

Query: 237 NPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFF 296
           + + W +KGKLEI ++I++G+VGSGLCY  M+WCV ++GPVFT+AFTP IQIFVAI  F 
Sbjct: 241 DLSSWILKGKLEISSVIFAGIVGSGLCYGLMSWCVNKKGPVFTAAFTPFIQIFVAIFDFS 300

Query: 297 ILHERIYPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIP 356
           ILHE+I+ GSV+GSI+V+ GLYILLWGKSKE ++C  MKQ+Q+A +D   D     +++ 
Sbjct: 301 ILHEQIHLGSVLGSILVIAGLYILLWGKSKEEEDCV-MKQSQVAEEDPECDMAPQVYILE 359

Query: 357 VA 358
            +
Sbjct: 360 TS 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425442|ref|XP_002272105.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/349 (59%), Positives = 267/349 (76%), Gaps = 7/349 (2%)

Query: 13  MVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPIL 72
           MVAVN GL+ AN L+K ILD G NHLV++ YRQ I+T+F++ +A+F ERKSRPKLT  IL
Sbjct: 1   MVAVNFGLSVANVLIKMILDQGANHLVVITYRQSISTVFISTIAFFLERKSRPKLTFRIL 60

Query: 73  CQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDG 132
           C +F SAL G TL QYFFLLG +YT+A+FSCAFIN+VP  TF+L+L F+LEK+N+    G
Sbjct: 61  CHIFASALLGATLTQYFFLLGLKYTSASFSCAFINLVPAITFILSLVFKLEKVNLGGKCG 120

Query: 133 RSKVLGAIVCIGGALTLTLYKGKPF----YLGATNHMTNDVNTMNSSKKADDWAIGSIVL 188
           R+KVLG  +CIGGAL L LY+G P     Y  A    T+   T  SS +   WA GS+VL
Sbjct: 121 RAKVLGTFICIGGALLLGLYRGMPLTNPAYPQAEIPGTSHAKTSISSHRTKSWATGSMVL 180

Query: 189 IAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLE 248
            A ++ WSSWFL+QA I KKYPC+YSSTAIM+ F A Q+A+LS I++R+ + W +KGKLE
Sbjct: 181 TAASLTWSSWFLLQAGISKKYPCQYSSTAIMSFFSATQAAILSSILDRDLSLWILKGKLE 240

Query: 249 IITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVV 308
           I T+I++G+VGSGLCYV M+WCV ++GPVFT+AFTP IQIFVAI  F ILHE+I+ GSV+
Sbjct: 241 ISTVIFAGIVGSGLCYVLMSWCVNKKGPVFTAAFTPFIQIFVAIFDFSILHEQIHLGSVL 300

Query: 309 GSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPV 357
           GSI+V+ GLYILLWGKSKE ++C  MKQ+Q+A +D   D ++P  V+P+
Sbjct: 301 GSILVIAGLYILLWGKSKEEEDCV-MKQSQVAEEDPECD-MAP-QVVPI 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130726|ref|XP_002320912.1| predicted protein [Populus trichocarpa] gi|222861685|gb|EEE99227.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/342 (57%), Positives = 251/342 (73%), Gaps = 2/342 (0%)

Query: 6   QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
           QWKP++ M+ ++   A  N LLKK++D G N++VI  YR   + IFLAP+AYFWERK RP
Sbjct: 6   QWKPVVGMLVISFAFAIVNLLLKKMIDQGTNNMVIATYRLSSSAIFLAPIAYFWERKGRP 65

Query: 66  KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
           KLT  I C LF  A  G+TL QY FLLG EY +  FSCAF+N VPV+TF+LAL FRLEKL
Sbjct: 66  KLTASIFCHLFLGAFVGLTLTQYLFLLGLEYISVTFSCAFLNTVPVNTFILALLFRLEKL 125

Query: 126 NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGS 185
           NM S  GR+KVLG  +C+GGA+ L LYKG P      +  T   + + S KK   W  GS
Sbjct: 126 NMSSKAGRAKVLGTFICMGGAVLLILYKGIPL-TNPRSEATTTHDILISGKKKRSWVAGS 184

Query: 186 IVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKG 245
           I+ +A   +WS+WFL+QA+I K YPC+YSSTAIM+ FGAIQSA LS I++R  + W +K 
Sbjct: 185 ILSLAGCFMWSAWFLMQAKISKIYPCQYSSTAIMSFFGAIQSAALSSILKRKFSMWILKS 244

Query: 246 KLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPG 305
           KLEII+++ +G++GSGLCYVGM+WC++QRGPVFTSAFTP IQIF A+  F ILHE+IY G
Sbjct: 245 KLEIISVLNAGIIGSGLCYVGMSWCIKQRGPVFTSAFTPFIQIFAAMFDFSILHEQIYLG 304

Query: 306 SVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFD 347
           SV+GSI+V++GLYILLWGK  E  +C G KQAQL  ++ + D
Sbjct: 305 SVLGSIVVILGLYILLWGKRTEAVDC-GEKQAQLTDEEENHD 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426479|ref|XP_002270961.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/340 (56%), Positives = 257/340 (75%), Gaps = 5/340 (1%)

Query: 7   WKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPK 66
           W P+I+M+AV+   A  N LLK++L+  +NHLV++ YRQ I+TIFL P+ YFWER SRPK
Sbjct: 10  WSPVIVMLAVDFAFAVVNILLKEVLNAEMNHLVLITYRQSISTIFLVPIGYFWERNSRPK 69

Query: 67  LTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLN 126
           LT+ ILC LFFSAL G +L QYFFLLG +YT+A F+CAFIN+VP  TF+++LPF LE +N
Sbjct: 70  LTLRILCYLFFSALVGASLTQYFFLLGIQYTSATFACAFINMVPAITFIMSLPFGLEIVN 129

Query: 127 MKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYL----GATNHMTNDVNTMNSSKKADDWA 182
           +K+  GR+K++G +VCI GA+ LTLYKG P        A +   +   +++S KK + W 
Sbjct: 130 IKTNRGRAKLIGTLVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGKKTERWT 189

Query: 183 IGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWA 242
           +GSI L+  T++WSSWFLIQ+ IGK YPC+YSSTAIM+ FGAIQSAV+SL ++RN + W 
Sbjct: 190 VGSIALMGGTLLWSSWFLIQSNIGKLYPCQYSSTAIMSFFGAIQSAVISLSMDRNLSLWI 249

Query: 243 MKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERI 302
           +KGK EI+T+IY+GVVGSGLCYV M+WCV++RGPVFT+AF+PL+QI   +    ILHE++
Sbjct: 250 LKGKTEILTVIYAGVVGSGLCYVAMSWCVKKRGPVFTAAFSPLVQIMAVMFDIPILHEQL 309

Query: 303 YPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQ 342
           + GSV+GS  V+ GLYILLWGK K+  E   M+  Q A +
Sbjct: 310 HLGSVLGSATVIAGLYILLWGKKKD-AENSSMELVQEAEE 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576955|ref|XP_003556595.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/350 (54%), Positives = 261/350 (74%), Gaps = 4/350 (1%)

Query: 5   RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR 64
           + WKP ++M+ VNL LA  N  LKK+L+ G+++L I+ YRQ I+ IFL P+A F+ERK  
Sbjct: 10  KMWKPALVMIIVNLALAFVNIFLKKVLNEGVDYLTILTYRQAISAIFLTPIACFYERKR- 68

Query: 65  PKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEK 124
            KL   I+C LF SAL GVTL Q  +L+G EYT+A F+CAF+N+VPV TF++ALP  +EK
Sbjct: 69  -KLEGHIICLLFLSALVGVTLTQCLYLIGLEYTSATFACAFLNMVPVFTFIMALPLGIEK 127

Query: 125 LNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIG 184
           +NMK+L  ++KVLG  VCIGGAL L LYKG P       H+ +     + + K   W IG
Sbjct: 128 VNMKNLSAKAKVLGTFVCIGGALMLILYKGVPLIKQQPEHLADKGTITSPASKLKKWIIG 187

Query: 185 SIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMK 244
           S++L A  ++WSSWFL+QARI KKYPC+YSSTAI++ F AIQSA+L+L+++R+ A W +K
Sbjct: 188 SLLLTAGCLLWSSWFLMQARISKKYPCQYSSTAILSSFAAIQSAILTLVIDRSNAKWILK 247

Query: 245 GKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYP 304
           GKLEI+T++Y+G+VGSGLCYV M+WCV+QRGPVFTSAFTPL+Q+FVA++ F ILHE IY 
Sbjct: 248 GKLEIMTVVYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILHEEIYL 307

Query: 305 GSVVGSIIVVIGLYILLWGKSKEIDEC--QGMKQAQLAPQDGHFDAVSPS 352
           GS+ GS++V+ G YILLWGKSKE ++   +G +++Q   +  +    SP+
Sbjct: 308 GSIAGSVLVISGTYILLWGKSKEEEQSAVKGTQESQEDEESKNNLGASPN 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742491|emb|CBI34640.3| unnamed protein product [Vitis vinifera]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/340 (56%), Positives = 257/340 (75%), Gaps = 5/340 (1%)

Query: 7   WKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPK 66
           W P+I+M+AV+   A  N LLK++L+  +NHLV++ YRQ I+TIFL P+ YFWER SRPK
Sbjct: 390 WSPVIVMLAVDFAFAVVNILLKEVLNAEMNHLVLITYRQSISTIFLVPIGYFWERNSRPK 449

Query: 67  LTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLN 126
           LT+ ILC LFFSAL G +L QYFFLLG +YT+A F+CAFIN+VP  TF+++LPF LE +N
Sbjct: 450 LTLRILCYLFFSALVGASLTQYFFLLGIQYTSATFACAFINMVPAITFIMSLPFGLEIVN 509

Query: 127 MKSLDGRSKVLGAIVCIGGALTLTLYKGKPF----YLGATNHMTNDVNTMNSSKKADDWA 182
           +K+  GR+K++G +VCI GA+ LTLYKG P        A +   +   +++S KK + W 
Sbjct: 510 IKTNRGRAKLIGTLVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGKKTERWT 569

Query: 183 IGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWA 242
           +GSI L+  T++WSSWFLIQ+ IGK YPC+YSSTAIM+ FGAIQSAV+SL ++RN + W 
Sbjct: 570 VGSIALMGGTLLWSSWFLIQSNIGKLYPCQYSSTAIMSFFGAIQSAVISLSMDRNLSLWI 629

Query: 243 MKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERI 302
           +KGK EI+T+IY+GVVGSGLCYV M+WCV++RGPVFT+AF+PL+QI   +    ILHE++
Sbjct: 630 LKGKTEILTVIYAGVVGSGLCYVAMSWCVKKRGPVFTAAFSPLVQIMAVMFDIPILHEQL 689

Query: 303 YPGSVVGSIIVVIGLYILLWGKSKEIDECQGMKQAQLAPQ 342
           + GSV+GS  V+ GLYILLWGK K+  E   M+  Q A +
Sbjct: 690 HLGSVLGSATVIAGLYILLWGKKKDA-ENSSMELVQEAEE 728

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
TAIR|locus:2102881	364	UMAMIT32 "Usually multiple aci	0.881	0.881	0.510	1.3e-86
TAIR|locus:2125172	365	UMAMIT31 "Usually multiple aci	0.903	0.901	0.471	6.4e-83
TAIR|locus:2116967	361	UMAMIT30 "Usually multiple aci	0.892	0.900	0.445	4e-74
TAIR|locus:2200990	365	UMAMIT28 "Usually multiple aci	0.947	0.945	0.385	1e-61
TAIR|locus:2125167	365	UMAMIT29 "Usually multiple aci	0.947	0.945	0.359	2.7e-61
TAIR|locus:2200041	337	UMAMIT26 "Usually multiple aci	0.887	0.958	0.369	9.3e-59
TAIR|locus:2200056	352	UMAMIT27 "Usually multiple aci	0.884	0.914	0.372	3.2e-58
TAIR|locus:2012255	374	UMAMIT25 "Usually multiple aci	0.857	0.834	0.350	1.1e-57
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.807	0.731	0.378	4.2e-56
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.895	0.848	0.338	2.1e-54

TAIR|locus:2102881 UMAMIT32 "Usually multiple acids move in and out Transporters 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
 Identities = 164/321 (51%), Positives = 212/321 (66%)

Query:     7 WKPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPK 66
             WK ++MM                  D GLN +V   YR  + T+FL P A F ER +RPK
Sbjct:     9 WKAVLMMSMINIGLSVVNVMFKKMIDEGLNRMVATTYRLAVGTLFLIPFAIFLERHNRPK 68

Query:    67 LTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLN 126
             LT  ILC LFFSAL G +L QYFFL+G EYT++ FS AF N+VP  TF LAL FR E LN
Sbjct:    69 LTGRILCSLFFSALLGTSLVQYFFLIGLEYTSSTFSLAFSNMVPSVTFALALVFRQETLN 128

Query:   127 MKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSI 186
             +KS  GR+K+LG ++CI GAL LTLYKG       + HM     T ++      WA+GSI
Sbjct:   129 IKSNVGRAKLLGTMICICGALVLTLYKGTALSREHSTHMETHTRTDSTGAMTQKWAMGSI 188

Query:   187 VLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGK 246
             +L+   ++WSSWF++QA+I + YPC+Y+ST I++ FG IQSA+LSLI ER+ + W +K K
Sbjct:   189 MLVISIIIWSSWFIVQAKISRVYPCQYTSTTILSFFGVIQSALLSLISERSTSMWVVKDK 248

Query:   247 LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPXX 306
              +++ ++YSG+VGSGLCYVGM+WC+ QRG VFTS+F PLIQ+F AI  F  LHE+IY   
Sbjct:   249 FQVLALLYSGIVGSGLCYVGMSWCLRQRGAVFTSSFIPLIQVFAAIFSFSFLHEQIYCGS 308

Query:   307 XXXXXXXXXXLYILLWGKSKE 327
                       LYILLWGKSK+
Sbjct:   309 VIGSMVIIVGLYILLWGKSKD 329

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2125172 UMAMIT31 "Usually multiple acids move in and out Transporters 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
 Identities = 156/331 (47%), Positives = 215/331 (64%)

Query:     3 CCRQWKPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERK 62
             C  +W P+I+M                  DGG+NH+VI  YR  I+T+FLAP+A+FWERK
Sbjct:     4 CDGKWTPVIIMVMINSALGLANALVKKVLDGGVNHMVIATYRLAISTLFLAPIAFFWERK 63

Query:    63 SRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRL 122
             +RP LT+ IL QLFFSAL G +L QYFFLLG  YT+A  +CAFI++ P  TF++AL FR+
Sbjct:    64 TRPTLTLNILVQLFFSALVGASLTQYFFLLGLSYTSATLACAFISMTPAITFVMALIFRV 123

Query:   123 EKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWA 182
             EKLNMKS  G   V+GA++CIGGAL LT+YKG P         T+ +   N + K ++W 
Sbjct:   124 EKLNMKSKAGMGMVMGALICIGGALLLTMYKGVPL-TKLRKLETHQLINNNHAMKPENWI 182

Query:   183 IGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWA 242
             IG ++L A +  + SW LIQA++ +KYPC+YSST +++ FG IQ A+LSLI  R+   W 
Sbjct:   183 IGCVLLFAGSSCFGSWMLIQAKVNEKYPCQYSSTVVLSFFGTIQCALLSLIKSRDITAWI 242

Query:   243 MKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERI 302
             +  KL+I+TI+Y+G V  G+C VG +WC+ +RGP+FTS FTP+  IF  +  F ILH +I
Sbjct:   243 LTDKLDIVTIVYAGAVAQGICTVGTSWCIRKRGPIFTSIFTPVGLIFATLFDFLILHRQI 302

Query:   303 YPXXXXXXXXXXXXLYILLWGKSKEI-DECQ 332
             +             LYI L GK + + +EC+
Sbjct:   303 FLGSVVGSGVVIFGLYIFLLGKVRLMKEECE 333

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2116967 UMAMIT30 "Usually multiple acids move in and out Transporters 30" [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 147/330 (44%), Positives = 206/330 (62%)

Query:     6 QWKPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
             +W P+I++                  DGG+NH+VI  YR  I+T+FL PVAYFWERK+RP
Sbjct:     7 KWAPMIVLIVSNMIAGMVNALVKKVLDGGINHMVIATYRLGISTLFLLPVAYFWERKTRP 66

Query:    66 KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
             KLT+ I CQLF SAL G +L QYF+LLG  YT+A    AF  I+P  TF++AL F  EKL
Sbjct:    67 KLTLSISCQLFVSALFGASLMQYFYLLGLSYTSATLGSAFWAIMPSLTFVMALIFGFEKL 126

Query:   126 NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGS 185
             ++K+  G   VLG ++ + G L LT+Y+G P     TN      N+ N +   ++W  G 
Sbjct:   127 SLKTKIGYGVVLGTLISLVGGLLLTMYQGIPL----TNSPEQAANSNNHTGH-ENWIKGC 181

Query:   186 IVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKG 245
               L+   V++SSW LIQA+I  KYPC YSST I+++FG +Q A+LSLI  R+   W ++ 
Sbjct:   182 FFLLTGVVLFSSWMLIQAKINVKYPCPYSSTVILSVFGTLQCALLSLIKTRHLEDWILRD 241

Query:   246 KLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPX 305
             +L IIT++ +GVV  G+C VGM+WC++Q+GPV +S+F+P++ +   +  F ILH  IY  
Sbjct:   242 ELTIITVVIAGVVAQGMCTVGMSWCIKQQGPVVSSSFSPVVLMSATVFDFLILHREIYLG 301

Query:   306 XXXXXXXXXXXLYILLWGKSKEIDECQGMK 335
                        LYI LW +SK+I EC+ MK
Sbjct:   302 SVIGSVVVVIGLYIFLWSRSKQIVECKIMK 331

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2200990 UMAMIT28 "Usually multiple acids move in and out Transporters 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 136/353 (38%), Positives = 193/353 (54%)

Query:     6 QWKPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
             ++ P+I+M                  D G+NH+VI AYR  I+ + L P AY  ERK+RP
Sbjct:    13 KYSPVIVMVMSNVAMGSVNALVKKALDVGVNHMVIGAYRMAISALILVPFAYVLERKTRP 72

Query:    66 KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
             ++T  ++   F S L G +L Q+FFLLG  YT+A  SCA ++++P  TF LAL FR E +
Sbjct:    73 QITFRLMVDHFVSGLLGASLMQFFFLLGLSYTSATVSCALVSMLPAITFALALIFRTENV 132

Query:   126 N-MKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSK-KADDWAI 183
               +K+  G  KV+G ++CI GAL LT YKG P    + +H     +  N+ + KA++W +
Sbjct:   133 KILKTKAGMLKVIGTLICISGALFLTFYKG-PQISNSHSHSHGGASHNNNDQDKANNWLL 191

Query:   184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAM 243
             G + L   TV+ S W L Q  +  KYPCKYSST +M++F A Q A+LSL   R+   W +
Sbjct:   192 GCLYLTIGTVLLSLWMLFQGTLSIKYPCKYSSTCLMSIFAAFQCALLSLYKSRDVNDWII 251

Query:   244 KGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIY 303
               +  I  IIY+GVVG  +  V   W +++ G VF SAF PL  I   +  F ILH  +Y
Sbjct:   252 DDRFVITVIIYAGVVGQAMTTVATTWGIKKLGAVFASAFFPLTLISATLFDFLILHTPLY 311

Query:   304 PXXXXXXXXXXXXLYILLWGKSKEIDEC----QGM-KQAQLAPQDGHFDAVSP 351
                          LY+ LWGK+KE +       GM  +AQ    +   D+ SP
Sbjct:   312 LGSVIGSLVTITGLYMFLWGKNKETESSTALSSGMDNEAQYTTPNKDNDSKSP 364

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2125167 UMAMIT29 "Usually multiple acids move in and out Transporters 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 128/356 (35%), Positives = 192/356 (53%)

Query:     6 QWKPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
             QW P+I+M                  D G+NH++  AYR  I+ + L P +Y WERK+RP
Sbjct:     6 QWAPVIVMLISSVAMGSVNALVKKALDVGVNHMIFGAYRMAISALILVPFSYIWERKTRP 65

Query:    66 KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
             +LT  +LC+ F S L G +L Q+FFLLG  YT+A  S A ++++P  TF LAL FR+E  
Sbjct:    66 QLTFMLLCEHFISGLLGASLMQFFFLLGLSYTSATVSMALVSMLPAITFALALIFRIENA 125

Query:   126 -NMKSLDGRSKVLGAIVCIGGALTLTLYKG----KPFYLGATNHMTNDVNTMNSSKKADD 180
              N+KS  G  KV+G ++CI GA+ LT YKG     P       H  N+ N  + +KK   
Sbjct:   126 QNLKSKAGVLKVMGTLICIMGAMLLTFYKGPELSNPHSHPQARHNNNNNNGHDQTKK--- 182

Query:   181 WAIGSIVLIAFTVVWSSWFLIQARIGKKYPC-KYSSTAIMALFGAIQSAVLSLIVERNPA 239
             W +G + L+  TV+ S W L Q ++  KYP  KYSST +M++F + Q A+LSL   R+  
Sbjct:   183 WLLGCLYLVIGTVLLSLWMLFQGKLSFKYPGNKYSSTCLMSVFASFQCAILSLYKSRDVK 242

Query:   240 GWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILH 299
              W ++ K  I+  +Y+G+VG  +  V  +W ++  G VF S F+P+  +   +  F ILH
Sbjct:   243 DWIIEDKFVILVTLYAGIVGQAMSTVVTSWSIKMTGAVFVSTFSPVSLVAATLFDFLILH 302

Query:   300 ERIYPXXXXXXXXXXXXLYILLWGKSKEIDEC--QGMKQAQLAPQDGHFDAVSPSH 353
               +Y             LY+ LWG+  E D+   + +  +Q +    + D    +H
Sbjct:   303 SPLYLGSILGSVVTITGLYVFLWGRKNETDQSVSKTLNSSQFSQNKDNEDHTIANH 358

GO:0016020 "membrane" evidence=IEA

GO:0009830 "cell wall modification involved in abscission" evidence=RCA

TAIR|locus:2200041 UMAMIT26 "Usually multiple acids move in and out Transporters 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 120/325 (36%), Positives = 181/325 (55%)

Query:     6 QWKPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
             +W PII+M                  D G+NH++I AYR  I++  LAP+AY  ER+  P
Sbjct:    13 KWPPIIVMVISQVAMGSVNALVKKALDVGVNHMIIGAYRIAISSFILAPIAYILEREIIP 72

Query:    66 KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
             ++T  ++   F S L G +L Q+F+LLG  YT+A  +CA ++++P  TF  AL  R EK+
Sbjct:    73 EITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALILRTEKI 132

Query:   126 -NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIG 184
              ++++  G  KV+G I+CI GAL LT YKG P    + +H     +  NS     +W +G
Sbjct:   133 KSLRTQAGMIKVMGTIICISGALFLTFYKG-PHISNSHSHQEALPHNNNSDHNTKNWLLG 191

Query:   185 SIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMK 244
              + L   TV+ S W L Q  +  KYPCK+SST +M++F A Q A+LSL   R+   W + 
Sbjct:   192 CLYLTIGTVLISLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRDVKDWIID 251

Query:   245 GKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYP 304
              +  I  I+Y+GV+G  +  V + W V++ G VF SA  P+  I  ++  F ILH  +Y 
Sbjct:   252 DRFVIGVIVYAGVIGQAMSTVSVTWGVKKLGAVFVSAIMPIALISASLFDFIILHTPLYL 311

Query:   305 XXXXXXXXXXXXLYILLWGKSKEID 329
                         LY+ LWGK+K+++
Sbjct:   312 GSLIGSVGTITGLYVFLWGKNKDME 336

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2200056 UMAMIT27 "Usually multiple acids move in and out Transporters 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 121/325 (37%), Positives = 177/325 (54%)

Query:     6 QWKPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP 65
             +W P+I+M                  D G+NH++I AYR  I++  L P+AYF ERK  P
Sbjct:    13 KWPPMIVMVTSQVAMGSVNALVKKALDVGVNHMIIGAYRMAISSFILVPIAYFLERKIIP 72

Query:    66 KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKL 125
             K+T  ++   F S L G +L Q+F+LLG  YT+A  +CA ++++P  TF  AL  R EK+
Sbjct:    73 KITFRLMVDHFISGLLGASLMQFFYLLGLSYTSATVACALVSLMPAITFAFALILRTEKI 132

Query:   126 -NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIG 184
              ++K+  G  KV+G ++CI GAL LT YKG P    + +H+   +   NS     +W +G
Sbjct:   133 KDLKTQAGMIKVMGTLICISGALFLTFYKG-PHISNSHSHL-EALPHNNSDHNTKNWLLG 190

Query:   185 SIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMK 244
              + L+   V+ S W L Q  +  KYPCK+SST +M++F A Q A+LSL   R+   W + 
Sbjct:   191 CLYLVIGIVLLSLWILFQGTLSIKYPCKFSSTCLMSIFAAFQCALLSLYKSRDLKHWIID 250

Query:   245 GKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYP 304
                 I  IIY+GV+G  +  V   W + + G VF SA  P+  I   +  F ILH  +Y 
Sbjct:   251 DGFVIGVIIYAGVIGQAMSTVAATWGINRLGAVFASAIMPVSLISATLFDFLILHTPLYL 310

Query:   305 XXXXXXXXXXXXLYILLWGKSKEID 329
                         LY+ LWGK+KE +
Sbjct:   311 GSVIGSVGTIIGLYVFLWGKNKETE 335

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2012255 UMAMIT25 "Usually multiple acids move in and out Transporters 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 111/317 (35%), Positives = 190/317 (59%)

Query:    32 DGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFL 91
             + G+  L++VAYRQI ATI   PVA+F ERK+RPK+T+ IL Q+FF ++TG T  Q  + 
Sbjct:    31 EAGMKPLILVAYRQIFATIATFPVAFFLERKTRPKITLRILVQVFFCSITGATGNQVLYF 90

Query:    92 LGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL 151
             +G + ++   +CA  N++P  TFLLA  FR E + +K   G++KV+G +VC+ GA+ L+ 
Sbjct:    91 VGLQNSSPTIACALTNLLPAVTFLLAAIFRQETVGIKKASGQAKVIGTLVCVIGAMVLSF 150

Query:   152 YKGKPFYLGATN-HMT--NDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKK 208
             Y G    +G +  H     ++    SS    ++ +G  +++A  V W++WF+IQ ++ + 
Sbjct:   151 YHGHTIGIGESKIHWAYAENITKHGSSSGHSNFFLGPFLIMAAAVSWAAWFIIQTKMSET 210

Query:   209 YPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMA 268
             +   Y+ST +M L G+IQ   ++LI +   + W++   L  I+ +Y+GVV S L +  M+
Sbjct:   211 FAAPYTSTLLMCLMGSIQCGAIALISDHTISDWSLSSPLRFISALYAGVVASALAFCLMS 270

Query:   269 WCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPXXXXXXXXXXXXLYILLWGKSKEI 328
             W ++++GP++ S F+PL+ + VAI  + +L E++Y             LY +LWGK +E+
Sbjct:   271 WAMQRKGPLYVSVFSPLLLVVVAIFSWALLEEKLYTGTFMGSALVVIGLYGVLWGKDREV 330

Query:   329 DECQGMKQAQLAPQDGH 345
              E +  ++ +   Q  H
Sbjct:   331 SEKE--EEREKVKQQNH 345

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 114/301 (37%), Positives = 184/301 (61%)

Query:    34 GLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLG 93
             G++H V+V YR  IAT  +AP A+F+ERK++PK+T  I  QLF   L G  + Q F+ +G
Sbjct:    43 GMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSIFMQLFILGLLGPVIDQNFYYMG 102

Query:    94 FEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYK 153
              +YT+  FSCA  N++P  TF+LA+ FR+E L++K L  ++K+ G +V + GA+ +T+YK
Sbjct:   103 LKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYK 162

Query:   154 GKPFYLGATNHM----TNDVNTMNSSKKADD--WAIGSIVLIAFTVVWSSWFLIQARIGK 207
             G    L  T +M    ++  NT +S   + D  +  GSI+LI  T+ W+S F++QA+I K
Sbjct:   163 GPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKGSILLIFATLAWASLFVLQAKILK 222

Query:   208 KYPC-KYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVG 266
              Y   + S T ++   G +Q+  ++ ++E NP+ W +   + ++   YSG+V S + Y  
Sbjct:   223 TYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYV 282

Query:   267 MAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPXXXXXXXXXXXXLYILLWGKSK 326
                 +++RGPVF +AF+PL+ + VA++G F+L E+I+             LY +LWGK K
Sbjct:   283 QGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQK 342

Query:   327 E 327
             E
Sbjct:   343 E 343

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 111/328 (33%), Positives = 188/328 (57%)

Query:     8 KPIIMMXXXXXXXXXXXXXXXXXXDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKL 67
             +P ++M                  + G N  V++ YR ++A + LAP A  +ERK RPK+
Sbjct:    12 RPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKM 71

Query:    68 TVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNM 127
             T+ +L ++         L Q F  LG   T+A ++ A +NI+P  TF++A   R+EK+N+
Sbjct:    72 TLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNI 131

Query:   128 KSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATN-HMTNDVNTMNSSKKADDWAIGSI 186
               +  ++K++G +V +GGAL +TLYKG    L  +N +M       N+S+  ++W +G++
Sbjct:   132 AEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVGTL 191

Query:   187 VLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGK 246
             +++   V WS ++++Q+   K YP   S +A++ L GA+QS  ++L+VER+P+GWA+   
Sbjct:   192 LILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVGWD 251

Query:   247 LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPXX 306
               +   +Y+G+V SG+ Y      ++ RGPVF +AF PL  I VA++  FILHE+I+   
Sbjct:   252 ARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQIHFGC 311

Query:   307 XXXXXXXXXXLYILLWGKSKEIDECQGM 334
                       LY+++WGK K+  E  G+
Sbjct:   312 VIGGAVIAAGLYMVVWGKGKDY-EVSGL 338

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LI65	WTR24_ARATH	No assigned EC number	0.5280	0.9120	0.9120	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002832001 SubName- Full=Chromosome chr1 scaffold_136, whole genome shotgun sequence; (362 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	364
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-42
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	1e-10
pfam00892	126	pfam00892, EamA, EamA-like transporter family	1e-07
pfam00892	126	pfam00892, EamA, EamA-like transporter family	1e-07

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  151 bits (382), Expect = 2e-42
 Identities = 94/321 (29%), Positives = 172/321 (53%), Gaps = 11/321 (3%)

Query: 13  MVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWER-KSRPKLTVPI 71
           M+A    +   + L K     GLN    + Y  ++A++ L P  +F  R +S P L+V I
Sbjct: 18  MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI 77

Query: 72  LCQLFFSALTGVTLAQYFFL--LGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKS 129
           L ++    L G   + Y     +G EY+    + A  NI P  TF+LA+ FR+EK++ K 
Sbjct: 78  LSKI---GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKE 134

Query: 130 LDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTN--DVNTMNSSKKADDWAIGSIV 187
               +KV+G I+ + GAL +  Y G   ++ ++    N   ++   SS  + DW IG  +
Sbjct: 135 RSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNS-DWLIGGAL 193

Query: 188 LIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVER-NPAGWAMKGK 246
           L    +  S  F++QA I  +YP  ++ + +  +  +I ++++ L+VE+ NP+ W +   
Sbjct: 194 LTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFD 253

Query: 247 LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGS 306
           + +ITI+   ++ S + YV  +W V  +GP++ + F PL  +   ++G   L++ +Y G 
Sbjct: 254 ITLITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC 312

Query: 307 VVGSIIVVIGLYILLWGKSKE 327
           ++G I++ +G Y ++WGK+ E
Sbjct: 313 LIGGILITLGFYAVMWGKANE 333

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 57/318 (17%), Positives = 115/318 (36%), Gaps = 34/318 (10%)

Query: 10  IIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTV 69
           ++ ++   L    +   LK  ++     L   A R +IA + L P+          +  +
Sbjct: 9   LLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL--EPRGLRPAL 66

Query: 70  PILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKS 129
                L   AL G+ L      L  +YT+A+ +   I ++P+ T LLA+   L +     
Sbjct: 67  RPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERL--- 123

Query: 130 LDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLI 189
                ++LG ++ + G L + L  G                    S      A+ + +L 
Sbjct: 124 --SLLQILGILLALAGVLLILLGGG---------------GGGILSLLGLLLALAAALLW 166

Query: 190 AFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEI 249
           A                 +      +  +  L   +   +  L     P           
Sbjct: 167 ALYTALVKRLS-------RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRA-----W 214

Query: 250 ITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVG 309
           + ++Y GV  +GL Y+   + +   G    +  + L  +F A++G  +L E + P  ++G
Sbjct: 215 LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLG 274

Query: 310 SIIVVIGLYILLWGKSKE 327
           + +VV+G+ +      + 
Sbjct: 275 AALVVLGVLLASLRARRR 292

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 24/130 (18%), Positives = 61/130 (46%), Gaps = 4/130 (3%)

Query: 193 VVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITI 252
           + W+ +F+   ++ ++     + TA   L   I   +L  ++ +  A         I+ +
Sbjct: 1   LSWALYFVFSKKLLERIS-PLTFTAYRFLIAGILLILLLFLLRKPFALL---SLKAILAL 56

Query: 253 IYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSII 312
           +Y G+ G+ L Y+   + ++       S  T L  +F  I+   +L E++    ++G ++
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 313 VVIGLYILLW 322
           +++G+ ++L 
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 7/132 (5%)

Query: 20  LAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSA 79
             A   +  K L   ++ L   AYR +IA I L  +  F  RK    L++  +  L +  
Sbjct: 2   SWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLL-FLLRKPFALLSLKAILALLYLG 60

Query: 80  LTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGA 139
           L G  L    +    +Y +A+ +    ++ PV T +L++    EKL         ++LG 
Sbjct: 61  LFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLT------LKQLLGI 114

Query: 140 IVCIGGALTLTL 151
           ++ + G L + L
Sbjct: 115 VLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	364
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG2962	293	RarD Predicted permeases [General function predict	99.93
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.92
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.88
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
KOG2765	416	consensus Predicted membrane protein [Function unk	99.84
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.78
KOG1580	337	consensus UDP-galactose transporter related protei	99.74
COG2510	140	Predicted membrane protein [Function unknown]	99.71
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.67
KOG2766	336	consensus Predicted membrane protein [Function unk	99.65
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.63
COG2510	140	Predicted membrane protein [Function unknown]	99.61
KOG1581	327	consensus UDP-galactose transporter related protei	99.6
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.57
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.57
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.53
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.52
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.45
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.4
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.37
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.34
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.3
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.19
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.18
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.17
PRK13499	345	rhamnose-proton symporter; Provisional	99.17
PRK15430	296	putative chloramphenical resistance permease RarD;	99.16
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.13
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.1
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.09
PRK11272	292	putative DMT superfamily transporter inner membran	99.07
PLN00411	358	nodulin MtN21 family protein; Provisional	99.06
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.04
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	99.01
PRK11689	295	aromatic amino acid exporter; Provisional	99.0
KOG1582	367	consensus UDP-galactose transporter related protei	98.98
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.94
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.87
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.86
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.84
COG2962	293	RarD Predicted permeases [General function predict	98.79
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.78
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.73
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.67
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.65
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.59
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.59
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.51
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.46
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.39
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.3
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.3
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.09
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.95
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.93
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.92
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.82
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.81
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.79
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.7
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.61
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.6
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.57
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.56
PRK11431	105	multidrug efflux system protein; Provisional	97.53
COG2076	106	EmrE Membrane transporters of cations and cationic	97.53
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.51
KOG2765	416	consensus Predicted membrane protein [Function unk	97.41
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.37
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.36
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.36
COG2076	106	EmrE Membrane transporters of cations and cationic	97.35
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.33
PRK11431	105	multidrug efflux system protein; Provisional	97.28
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.24
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.77
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.7
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.43
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.31
PRK13499	345	rhamnose-proton symporter; Provisional	96.23
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.87
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.85
KOG1581	327	consensus UDP-galactose transporter related protei	95.31
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	95.3
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.28
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.25
KOG4831	125	consensus Unnamed protein [Function unknown]	94.5
KOG2922	335	consensus Uncharacterized conserved protein [Funct	94.45
KOG1580	337	consensus UDP-galactose transporter related protei	94.29
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	93.78
KOG1443	349	consensus Predicted integral membrane protein [Fun	92.92
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.84
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	91.22
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	89.71
KOG2766	336	consensus Predicted membrane protein [Function unk	87.47
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	85.19
KOG3912	372	consensus Predicted integral membrane protein [Gen	84.92
KOG1582	367	consensus UDP-galactose transporter related protei	82.25
PRK02237	109	hypothetical protein; Provisional	81.66

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=2.4e-36  Score=280.74  Aligned_cols=316  Identities=28%  Similarity=0.562  Sum_probs=248.9

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCCHHHHHHHHHHHHHH
Q 044658            4 CRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWER-KSRPKLTVPILCQLFFSALTG   82 (364)
Q Consensus         4 ~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~   82 (364)
                      +|..+.+..+++..+.++...++.|...+.+++|+.+.++|+.++.++++++.+.+++ +++++.+++++..+.+.|+++
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence            4567889999999999999999999999999999999999999999999998866544 333445688889999999998


Q ss_pred             HHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhh------ccccccccccccccchhHHHHHHhhhhhheeccCCc
Q 044658           83 VTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPF------RLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKP  156 (364)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~------l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~  156 (364)
                       .+++.+++.|++|++++.++++.++.|++++++++++      ++||+++.+      ++|++++++|+.++...++..
T Consensus        89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~  161 (358)
T PLN00411         89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPR  161 (358)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCcc
Confidence             7888899999999999999999999999999999999      599999999      999999999999987533321


Q ss_pred             cccccccccccccccc-CCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 044658          157 FYLGATNHMTNDVNTM-NSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVE  235 (364)
Q Consensus       157 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (364)
                      ....+.+.-.+..... ..+....+...|++++++++++|++|.+.+|+..+++++....++++..++.+...+.....+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~  241 (358)
T PLN00411        162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVE  241 (358)
T ss_pred             cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHc
Confidence            1000000000000000 011112334669999999999999999999999888866566777777777777666666544


Q ss_pred             c-CCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHH
Q 044658          236 R-NPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVV  314 (364)
Q Consensus       236 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~  314 (364)
                      . +...+..........+++.++. +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+
T Consensus       242 ~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl  320 (358)
T PLN00411        242 KNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT  320 (358)
T ss_pred             cCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence            3 1222221112234457777765 6789999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhheecCccc
Q 044658          315 IGLYILLWGKSKE  327 (364)
Q Consensus       315 ~g~~l~~~~~~~~  327 (364)
                      .|+++..+.++|+
T Consensus       321 ~Gv~l~~~~~~~~  333 (358)
T PLN00411        321 LGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHhhhhhh
Confidence            9999998765544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=9.9e-33  Score=252.43  Aligned_cols=287  Identities=13%  Similarity=0.156  Sum_probs=237.0

Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q 044658            1 MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSAL   80 (364)
Q Consensus         1 m~~~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~   80 (364)
                      |+-++-..-++..++..++||++++..|...+ +++|..++++|+.++.++++++...++ ++  ..+++++......|.
T Consensus         1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~--~~~~~~~~~~~~~g~   76 (292)
T PRK11272          1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRG-HP--LPTLRQWLNAALIGL   76 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhC-CC--CCcHHHHHHHHHHHH
Confidence            33333444566788999999999999999888 699999999999999999888765432 22  235678888888888


Q ss_pred             HHHHHHHHHHHHhc-cccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccc
Q 044658           81 TGVTLAQYFFLLGF-EYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYL  159 (364)
Q Consensus        81 ~~~~~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~  159 (364)
                      ++...++.+++++. ++++++.++++.++.|+++++++++ +|||+++++      ++|+.++++|+.++... +.    
T Consensus        77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~-~~----  144 (292)
T PRK11272         77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSG-GN----  144 (292)
T ss_pred             HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcC-cc----
Confidence            87677888999999 9999999999999999999999986 699999999      99999999999988631 11    


Q ss_pred             cccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 044658          160 GATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPA  239 (364)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (364)
                                        .+....|++++++++++||.+.+..|+..++  ++...+.+++..+.+...+.....+.+..
T Consensus       145 ------------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (292)
T PRK11272        145 ------------------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT  204 (292)
T ss_pred             ------------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence                              1123579999999999999999999997654  34556778888888877776554332211


Q ss_pred             cccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhh
Q 044658          240 GWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYI  319 (364)
Q Consensus       240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l  319 (364)
                        ...+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++
T Consensus       205 --~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~  282 (292)
T PRK11272        205 --ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVL  282 (292)
T ss_pred             --ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence              112346788999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             heecCc
Q 044658          320 LLWGKS  325 (364)
Q Consensus       320 ~~~~~~  325 (364)
                      ..+.++
T Consensus       283 ~~~~~~  288 (292)
T PRK11272        283 VTLGKY  288 (292)
T ss_pred             HHHHHh
Confidence            876443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=6e-32  Score=248.07  Aligned_cols=280  Identities=17%  Similarity=0.167  Sum_probs=217.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 044658            9 PIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQY   88 (364)
Q Consensus         9 ~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (364)
                      ..++.++++++||.++++.|...+ +++|..+.++|+.++.+.++++.  + +++   .+++   ..+..|++.....+.
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~--~-~~~---~~~~---~~~~~g~~~~~~~~~   74 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV--A-RPK---VPLN---LLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh--c-CCC---CchH---HHHHHHHHHHHHHHH
Confidence            346688999999999999999988 59999999999999877665543  1 111   1222   334456554355666


Q ss_pred             HHHHhccc-cCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccc
Q 044658           89 FFLLGFEY-TTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTN  167 (364)
Q Consensus        89 ~~~~al~~-~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~  167 (364)
                      +++.+++| .+++.++++.++.|+++.+++++++|||+++++      ++|+.++++|+.++... +...          
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~-~~~~----------  137 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIED-SLNG----------  137 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhccc-cCCC----------
Confidence            77889988 578899999999999999999999999999999      99999999999998731 1100          


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCc--hhHHHHHHHHHHHHHHHHHHHhhcCC---Cccc
Q 044658          168 DVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCK--YSSTAIMALFGAIQSAVLSLIVERNP---AGWA  242 (364)
Q Consensus       168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  242 (364)
                                ......|++++++++++|+.|.+..|+..++.+++  .....+....+.+.........+.+.   ..+.
T Consensus       138 ----------~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (299)
T PRK11453        138 ----------QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLV  207 (299)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhc
Confidence                      11235799999999999999999999987654322  23334444444433333333322211   1122


Q ss_pred             ccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          243 MKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                      ..+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++..+
T Consensus       208 ~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        208 TIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            23456799999999999999999999999999999999999999999999999999999999999999999999998876


Q ss_pred             cCc
Q 044658          323 GKS  325 (364)
Q Consensus       323 ~~~  325 (364)
                      .++
T Consensus       288 ~~~  290 (299)
T PRK11453        288 GLR  290 (299)
T ss_pred             chh
Confidence            554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1.6e-31  Score=244.77  Aligned_cols=284  Identities=11%  Similarity=0.085  Sum_probs=214.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTL   85 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (364)
                      +.+++++++++.++||.+++..|...+ +++|..+.++|+.++.+++.++.  . +++.+   ++++. ....+.+....
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~--~-~~~~~---~~~~~-~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV--G-FPRLR---QFPKR-YLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc--c-ccccc---cccHH-HHHHHhHHHHH
Confidence            567788999999999999999999988 59999999999999999887653  1 11111   11222 23344444577


Q ss_pred             HHHHHHHhccc----cCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccc
Q 044658           86 AQYFFLLGFEY----TTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGA  161 (364)
Q Consensus        86 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~  161 (364)
                      ++.+++.+++|    .+++.++++.++.|+++.+++++++|||+++++      ++|+.++++|+.++...+ ...+.  
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~-~~~~~--  144 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGD-NGLSL--  144 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCC-ccchh--
Confidence            77788877765    567778899999999999999999999999999      999999999999997421 11100  


Q ss_pred             cccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 044658          162 TNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGW  241 (364)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (364)
                              .+.  .....+...|++++++++++||.|.++.||..++. ++....   ...+.+.+.+.....+ ..  .
T Consensus       145 --------~~~--~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~---~~~~~~~l~~~~~~~~-~~--~  207 (295)
T PRK11689        145 --------AEL--INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLF---FILTALALWIKYFLSP-QP--A  207 (295)
T ss_pred             --------hhh--hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHH---HHHHHHHHHHHHHHhc-Cc--c
Confidence                    000  00011235699999999999999999999987665 444432   2223333333223222 11  1


Q ss_pred             cccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          242 AMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      ...+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++..
T Consensus       208 ~~~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        208 MVFSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            1223456777777774 789999999999999999999999999999999999999999999999999999999998886


Q ss_pred             ecC
Q 044658          322 WGK  324 (364)
Q Consensus       322 ~~~  324 (364)
                      ..+
T Consensus       287 ~~~  289 (295)
T PRK11689        287 LAT  289 (295)
T ss_pred             hhH
Confidence            544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=1e-31  Score=246.09  Aligned_cols=281  Identities=13%  Similarity=0.104  Sum_probs=211.1

Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC---CCCCHHHHHHHHH
Q 044658            1 MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR---PKLTVPILCQLFF   77 (364)
Q Consensus         1 m~~~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~   77 (364)
                      |+++++.+|++++++++++||..+++.|.. + +++|.++.++|+.++.+++.++...+++++.   ...+++++.... 
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA-   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHH-
Confidence            788899999999999999999999999975 5 5999999999999999888776644321111   001344443333 


Q ss_pred             HHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcc
Q 044658           78 SALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPF  157 (364)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~  157 (364)
                      .+.++.++++.++++|++++++++++++.++.|+++++++++++|||+++++      +.|+.++++|+.++...++   
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~---  148 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG---  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---
Confidence            5555568899999999999999999999999999999999999999999999      9999999999999863111   


Q ss_pred             cccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhc
Q 044658          158 YLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVER  236 (364)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (364)
                                           +.    ..++++++++|+.|.+..|+..++.. +....+.+....+.+...+.   ...
T Consensus       149 ---------------------~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  200 (296)
T PRK15430        149 ---------------------SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADS  200 (296)
T ss_pred             ---------------------Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccC
Confidence                                 00    14688899999999999998754311 11222233333333222111   111


Q ss_pred             CCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHh
Q 044658          237 NPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIG  316 (364)
Q Consensus       237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g  316 (364)
                      ....+. .++..++..++.+.+.+.++|.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++|++|
T Consensus       201 ~~~~~~-~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~  279 (296)
T PRK15430        201 STSHMG-QNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVA  279 (296)
T ss_pred             Cccccc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            111111 1122223334433346889999999999999999999999999999999999999999999999999999888


Q ss_pred             hhhhee
Q 044658          317 LYILLW  322 (364)
Q Consensus       317 ~~l~~~  322 (364)
                      +.+...
T Consensus       280 ~~v~~~  285 (296)
T PRK15430        280 LAIFVM  285 (296)
T ss_pred             HHHHHH
Confidence            877754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=6.1e-31  Score=240.65  Aligned_cols=279  Identities=13%  Similarity=0.144  Sum_probs=225.1

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 044658            3 CCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTG   82 (364)
Q Consensus         3 ~~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   82 (364)
                      +.++.+++.+++++.++|+....+.|...++ .+|..+.++|++++.++++++..  +++.  +.+++++...+..|++.
T Consensus         7 ~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~--~~~~--~~~~~~~~~~~~~g~~~   81 (293)
T PRK10532          7 KLPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFK--PWRL--RFAKEQRLPLLFYGVSL   81 (293)
T ss_pred             ccccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHh--HHhc--cCCHHHHHHHHHHHHHH
Confidence            3466889999999999999999999999995 99999999999999988887652  1221  34578888888888885


Q ss_pred             HHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccc
Q 044658           83 VTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGAT  162 (364)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~  162 (364)
                       ...+.++++++++++++.++++..+.|+++.+++.    |+++  +      ..++.++++|+.++... +...     
T Consensus        82 -~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~~-~~~~-----  142 (293)
T PRK10532         82 -GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLPL-GQDV-----  142 (293)
T ss_pred             -HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeeec-CCCc-----
Confidence             88889999999999999999999999999998873    4443  3      55677889999988631 1111     


Q ss_pred             ccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 044658          163 NHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWA  242 (364)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (364)
                                     +..+..|++++++++++|+.|.+..|+..++. ++... .+...++.+.+.+.....+.   . .
T Consensus       143 ---------------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~---~-~  201 (293)
T PRK10532        143 ---------------SHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG---E-A  201 (293)
T ss_pred             ---------------ccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC---c-c
Confidence                           11235799999999999999999999998765 35554 45556666666665544321   1 1


Q ss_pred             ccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          243 MKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                      ..+...|..+++++++++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++...+
T Consensus       202 ~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        202 LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            12334566678999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             cCcc
Q 044658          323 GKSK  326 (364)
Q Consensus       323 ~~~~  326 (364)
                      ..++
T Consensus       282 ~~~~  285 (293)
T PRK10532        282 TIRR  285 (293)
T ss_pred             cCCC
Confidence            5544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=1.1e-30  Score=235.24  Aligned_cols=258  Identities=17%  Similarity=0.249  Sum_probs=219.5

Q ss_pred             HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCc
Q 044658           20 LAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTA   99 (364)
Q Consensus        20 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~   99 (364)
                      ||.+++..|...+++.|+....+.|++.+.+++.++...  +     .+++++.+....|.++..+++.++++|++|+++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            899999999998866899999999999998888776532  1     235677777888888779999999999999999


Q ss_pred             ceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCC
Q 044658          100 AFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKAD  179 (364)
Q Consensus       100 ~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (364)
                      ++++++.++.|+++++++++++|||+++++      ++|+.++++|+.++.. ++.                      .+
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~~----------------------~~  124 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DGN----------------------LS  124 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CCc----------------------cc
Confidence            999999999999999999999999999999      9999999999999863 221                      12


Q ss_pred             CchHHHHHHHHHHHHHHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHh
Q 044658          180 DWAIGSIVLIAFTVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVV  258 (364)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  258 (364)
                      .+..|+.++++++++|+.+.+..|+..++.+ ++.....+++..+.+...+.....+...    ..+...|..+++.+++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~  200 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP----QALSLQWGALLYLGLI  200 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC----CcchHHHHHHHHHHHH
Confidence            3468999999999999999999999887654 2344555678888887777766543221    1244677788999999


Q ss_pred             hhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhh
Q 044658          259 GSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGL  317 (364)
Q Consensus       259 ~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~  317 (364)
                      ++.+++.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+.+++.|+
T Consensus       201 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       201 GTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999886

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=4e-29  Score=229.95  Aligned_cols=283  Identities=13%  Similarity=0.090  Sum_probs=221.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044658           11 IMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFF   90 (364)
Q Consensus        11 l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   90 (364)
                      ++.++..++-....++.|...++-..|..++++|+.++.+.+.+... ...+++++.+++++.+++..|+++ +++..+.
T Consensus         5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~   82 (302)
T TIGR00817         5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTS   82 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHH
Confidence            34555566666667889999984366999999999998877655521 122334457789999999999997 9999999


Q ss_pred             HHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccccccccccc
Q 044658           91 LLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVN  170 (364)
Q Consensus        91 ~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~  170 (364)
                      +.|++|++++.++++.++.|+++++++++++|||+++++      +.|+.++++|+.+...  ++               
T Consensus        83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~~---------------  139 (302)
T TIGR00817        83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--TE---------------  139 (302)
T ss_pred             HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--Cc---------------
Confidence            999999999999999999999999999999999999999      9999999999987642  11               


Q ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhc--cCCCchhHHHHHHHHHHHHHHHHHHHhhcCCC---cccc--
Q 044658          171 TMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGK--KYPCKYSSTAIMALFGAIQSAVLSLIVERNPA---GWAM--  243 (364)
Q Consensus       171 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--  243 (364)
                             .+....|++++++++++|+++.+..||..+  +. ++...+.++...+.+.+.|.....+....   .+..  
T Consensus       140 -------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~  211 (302)
T TIGR00817       140 -------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI  211 (302)
T ss_pred             -------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence                   112357999999999999999999999887  54 57889999999999998888776543110   0000  


Q ss_pred             --cch-hhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhh
Q 044658          244 --KGK-LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYIL  320 (364)
Q Consensus       244 --~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~  320 (364)
                        ... ..+...+..+..+....+.++++++++.+++++++..+++|+++++++++++||++++.+++|+++++.|++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence              010 11211223332233333346668999999999999999999999999999999999999999999999999999


Q ss_pred             eecCcc
Q 044658          321 LWGKSK  326 (364)
Q Consensus       321 ~~~~~~  326 (364)
                      .+.|.+
T Consensus       292 ~~~k~~  297 (302)
T TIGR00817       292 SRVKAQ  297 (302)
T ss_pred             HHHhcc
Confidence            875543

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=1.3e-27  Score=217.50  Aligned_cols=274  Identities=18%  Similarity=0.169  Sum_probs=204.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhh-hcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 044658           10 IIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWE-RKSRPKLTVPILCQLFFSALTGVTLAQY   88 (364)
Q Consensus        10 ~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (364)
                      +++.++++++|+..++..|...++ -++.  .+++.....+.+.++...+. ++.+++.+++.+...+..++. ...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVA-NMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHH-HHHHHH
Confidence            567899999999999999977664 4443  47777777777777765431 223333344444444555554 499999


Q ss_pred             HHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccccccccc
Q 044658           89 FFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTND  168 (364)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~  168 (364)
                      ++++|+++.+++.++++.++.|+++.+++++++|||+++++      ++|+.+++.|+.++...+ .             
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~-~-------------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSR-F-------------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhccc-c-------------
Confidence            99999999999999999999999999999999999999999      999999999999986321 1             


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCch---hHHHHHHHHHHHHHHHHHHHhhcCCCcccccc
Q 044658          169 VNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKY---SSTAIMALFGAIQSAVLSLIVERNPAGWAMKG  245 (364)
Q Consensus       169 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (364)
                               ...+..|+.++++++++|+.|.+..|+..++.++..   ..+.+......+.........+..  ... ..
T Consensus       139 ---------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~  206 (281)
T TIGR03340       139 ---------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PY  206 (281)
T ss_pred             ---------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hh
Confidence                     111246888999999999999999887654432111   122222222211111111111111  111 12


Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhh
Q 044658          246 KLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYI  319 (364)
Q Consensus       246 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l  319 (364)
                      ...++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|++++++|+.+
T Consensus       207 ~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       207 ARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            23456677888888999999999999999999999999999999999999999999999999999999999876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=3.9e-27  Score=214.62  Aligned_cols=301  Identities=15%  Similarity=0.226  Sum_probs=241.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGLN-HLVIVAYRQIIATIFLAPVAYFWERK-SRPKLTVPILCQLFFSALTG   82 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~   82 (364)
                      +..+..++.=..+++-..+...+....+++.+ |...+++.+..-.++..++..+++++ ++.+..+++|.++++.+++.
T Consensus        10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D   89 (334)
T PF06027_consen   10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD   89 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH
Confidence            34456666667788888889999988887666 88899998888777777766554432 23333467788888889997


Q ss_pred             HHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccc
Q 044658           83 VTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGAT  162 (364)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~  162 (364)
                       ..++++.+.|++|++.+.++++.++..+++++++++++|+|+++.+      ++|++++++|+.++...+....     
T Consensus        90 -v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~-----  157 (334)
T PF06027_consen   90 -VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSG-----  157 (334)
T ss_pred             -HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeeccccc-----
Confidence             8999999999999999999999999999999999999999999999      9999999999999986543211     


Q ss_pred             ccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcC-CCcc
Q 044658          163 NHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERN-PAGW  241 (364)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  241 (364)
                                ..++++.+...|++++++++++||+++++.++..++. +.........+++.++..+.....+.. ....
T Consensus       158 ----------~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~  226 (334)
T PF06027_consen  158 ----------SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESI  226 (334)
T ss_pred             ----------ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhcc
Confidence                      1112356679999999999999999999999999886 468888999999999988888777652 2222


Q ss_pred             cccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          242 AMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      + .+...+..++.. .++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|++++.
T Consensus       227 ~-w~~~~~~~~v~~-~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~  304 (334)
T PF06027_consen  227 H-WTSQVIGLLVGY-ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYN  304 (334)
T ss_pred             C-CChhhHHHHHHH-HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEE
Confidence            2 222333333333 33566777888889999999999999999999999999999999999999999999999999999


Q ss_pred             ecCccccch
Q 044658          322 WGKSKEIDE  330 (364)
Q Consensus       322 ~~~~~~~~~  330 (364)
                      ..+++..++
T Consensus       305 ~~~~~~~~~  313 (334)
T PF06027_consen  305 LAESPEEEA  313 (334)
T ss_pred             ccCCccccc
Confidence            776654433

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=1.9e-26  Score=215.38  Aligned_cols=284  Identities=15%  Similarity=0.156  Sum_probs=224.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILDGGLN-HLVIVAYRQIIATIFLAPVAYFWERKSRPKL--TVPILCQLFFSALTG   82 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   82 (364)
                      +.+..++.+....+-.......|..+++ ++ |..++++|++++.+++..+.... .++.++.  .++++..++..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence            4566667777777778888999999985 99 99999999999988765554322 2222333  346788899999998


Q ss_pred             HHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccc
Q 044658           83 VTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGAT  162 (364)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~  162 (364)
                       ...+...+.|+++++++.++++..+.|+++++++++++|||+++++      +.+++++++|+.+....+   .     
T Consensus       125 -~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~~~---~-----  189 (350)
T PTZ00343        125 -LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASVKE---L-----  189 (350)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheeccc---c-----
Confidence             5556667899999999999999999999999999999999999999      999999999999987311   1     


Q ss_pred             ccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCC------CchhHHHHHHHHHHHHHHHHHHHhhc
Q 044658          163 NHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYP------CKYSSTAIMALFGAIQSAVLSLIVER  236 (364)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (364)
                                      +....|++++++++++++++.+..|+..++.+      ++.....+....+.++++|.....+.
T Consensus       190 ----------------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~  253 (350)
T PTZ00343        190 ----------------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG  253 (350)
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                            11367999999999999999999999887532      24445666688888888888775543


Q ss_pred             CC--Ccc----cccchhhHHHHHHHHHhhhHHHHHHHHH----HHhccCcceehcchhhhHHHHHHHHHHHhcCCccchh
Q 044658          237 NP--AGW----AMKGKLEIITIIYSGVVGSGLCYVGMAW----CVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGS  306 (364)
Q Consensus       237 ~~--~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~----a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~  306 (364)
                      ..  ..+    .......+..+++ .++.+++.+++++.    +++++++.+.++..+++|+++++++++++||++++.+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~  332 (350)
T PTZ00343        254 KKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG  332 (350)
T ss_pred             HHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh
Confidence            10  001    0001112223344 34567888888885    9999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhhhheec
Q 044658          307 VVGSIIVVIGLYILLWG  323 (364)
Q Consensus       307 ~~G~~li~~g~~l~~~~  323 (364)
                      ++|++++++|++++++.
T Consensus       333 ~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        333 YLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999998764

>TIGR00688 rarD rarD protein

Probab=99.94  E-value=1.7e-25  Score=201.03  Aligned_cols=248  Identities=12%  Similarity=0.091  Sum_probs=184.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCCHHH-HHHHHHHHHH
Q 044658            8 KPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERK-----SRPKLTVPI-LCQLFFSALT   81 (364)
Q Consensus         8 ~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~   81 (364)
                      +|++++++++++||.++++.|. .+ +++|.+++++|++++.+++.++...++++     +.++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 45 49999999999999998887765433221     111122333 4456677777


Q ss_pred             HHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccc
Q 044658           82 GVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGA  161 (364)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~  161 (364)
                      . .+++.++++|++++++++++++.++.|+++++++++++|||+++++      ++++.++++|+.++...++       
T Consensus        80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence            5 8999999999999999999999999999999999999999999999      9999999999998863111       


Q ss_pred             cccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 044658          162 TNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGW  241 (364)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (364)
                                      +.     ..+++.++++|+.|.+..|+..++ + ....... .........+.....+.. ...
T Consensus       146 ----------------~~-----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~  200 (256)
T TIGR00688       146 ----------------SL-----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLLQTDFA-TVQ  200 (256)
T ss_pred             ----------------Cc-----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHHHhccC-ccc
Confidence                            00     135788999999999999997653 2 2222211 111111211111111111 101


Q ss_pred             cccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHH
Q 044658          242 AMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFI  297 (364)
Q Consensus       242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~  297 (364)
                      .......|..+++.|++ +.++|.++++++|+.++++++++.+++|+++.+++.+.
T Consensus       201 ~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       201 QTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            11122478888888875 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=2.7e-23  Score=189.90  Aligned_cols=284  Identities=21%  Similarity=0.330  Sum_probs=218.5

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 044658            4 CRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGV   83 (364)
Q Consensus         4 ~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   83 (364)
                      ++...+....++..+.|+......|...++..++....+.|...+.+...+... +++.... ...+.+.+....+.+..
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~   80 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLL-LEPRGLR-PALRPWLLLLLLALLGL   80 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH-hhccccc-ccccchHHHHHHHHHHH
Confidence            456677888888999999999999999874366777777799988887443332 1111111 11222444555666666


Q ss_pred             HHHHHHHHHhccccCcceeehcccchhHHHHHHhh-hhccccccccccccccchhHHHHHHhhhhhheeccCCccccccc
Q 044658           84 TLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLAL-PFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGAT  162 (364)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~-~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~  162 (364)
                      ..++.+++.++++++++.++++.++.|+++.++++ ++++||+++++      +.++.+++.|+.++...++...     
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~~-----  149 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGGG-----  149 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcch-----
Confidence            99999999999999999999999999999999997 77799999999      9999999999999984322110     


Q ss_pred             ccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHH-HHHHHHHHHHHHHHHHhhcCCCcc
Q 044658          163 NHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTA-IMALFGAIQSAVLSLIVERNPAGW  241 (364)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  241 (364)
                                     .+ ...|+++++.++++++++.+..|+.. +. ++..... +.+.  ............ ...  
T Consensus       150 ---------------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~~~~~~~~-~~~--  206 (292)
T COG0697         150 ---------------IL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLL--LALLLLLLFFLS-GFG--  206 (292)
T ss_pred             ---------------hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHH--HHHHHHHHHHhc-ccc--
Confidence                           01 46899999999999999999999887 43 3444444 3333  111111111111 111  


Q ss_pred             cccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          242 AMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      .......|..+.+.+++++++++.++.+++++.+++.++.+.+++|+++.++++++++|+++..+++|+.+++.|+.+..
T Consensus       207 ~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         207 APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            22334678888999999888999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ec
Q 044658          322 WG  323 (364)
Q Consensus       322 ~~  323 (364)
                      ..
T Consensus       287 ~~  288 (292)
T COG0697         287 LR  288 (292)
T ss_pred             cc
Confidence            76

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.93  E-value=9.5e-24  Score=183.27  Aligned_cols=282  Identities=14%  Similarity=0.126  Sum_probs=230.1

Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC-C--CCCHHHHHHHHH
Q 044658            1 MDCCRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR-P--KLTVPILCQLFF   77 (364)
Q Consensus         1 m~~~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-~--~~~~~~~~~~~~   77 (364)
                      |+ ++..+|+++.+.+.++||..+.+.|.. + ..++.++...|.+.+..+++.+....++.+. .  ..++|.+....+
T Consensus         1 ~~-~~~~~Gil~~l~Ay~lwG~lp~y~kll-~-~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l   77 (293)
T COG2962           1 MA-KDSRKGILLALLAYLLWGLLPLYFKLL-E-PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLAL   77 (293)
T ss_pred             CC-CcccchhHHHHHHHHHHHHHHHHHHHH-c-cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHH
Confidence            55 678899999999999999999999955 4 4999999999999999888877655433221 1  124566666777


Q ss_pred             HHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcc
Q 044658           78 SALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPF  157 (364)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~  157 (364)
                      .+++ +..++..|.+|.+...+-+++.-++..|++.++++++++|||+++.|      ++++.++.+||....+..|+..
T Consensus        78 ~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~lp  150 (293)
T COG2962          78 TALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGSLP  150 (293)
T ss_pred             HHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCCCc
Confidence            7777 59999999999999999999999999999999999999999999999      9999999999999987444321


Q ss_pred             cccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcC
Q 044658          158 YLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERN  237 (364)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (364)
                                                  ..++.-++.|+.|....|+..-   ++.+-.......-....+.+.+..+..
T Consensus       151 ----------------------------wval~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~l~~~  199 (293)
T COG2962         151 ----------------------------WVALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLFLADS  199 (293)
T ss_pred             ----------------------------HHHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHHHhcC
Confidence                                        2456678899999997666532   356666677777777666666666543


Q ss_pred             CCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhh
Q 044658          238 PAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGL  317 (364)
Q Consensus       238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~  317 (364)
                      .+.....+...+..++..|. .|.++..+|..+-|+++-+..+.++|++|..-.+++++++||+++..+++..++|..|+
T Consensus       200 ~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL  278 (293)
T COG2962         200 GQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL  278 (293)
T ss_pred             chhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            32122234466777777776 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheecC
Q 044658          318 YILLWGK  324 (364)
Q Consensus       318 ~l~~~~~  324 (364)
                      .++....
T Consensus       279 ~l~~~d~  285 (293)
T COG2962         279 ALFSIDG  285 (293)
T ss_pred             HHHHHHH
Confidence            9987643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.92  E-value=1.5e-22  Score=171.15  Aligned_cols=274  Identities=15%  Similarity=0.139  Sum_probs=226.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 044658            9 PIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQY   88 (364)
Q Consensus         9 ~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (364)
                      .++.++.+.+.-=....+.|..+.. ++|...+.+|..++.+++++++    |+.+.+.+++++..+...|+.. ...|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~----RPwr~r~~~~~~~~~~~yGvsL-g~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALF----RPWRRRLSKPQRLALLAYGVSL-GGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHh----hHHHhccChhhhHHHHHHHHHH-HHHHH
Confidence            4667777777777778889999995 9999999999999999998876    3333467889999999999996 99999


Q ss_pred             HHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccccccccc
Q 044658           89 FFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTND  168 (364)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~  168 (364)
                      +||.+++.+|.+.+..+.++.|+.+++++-   |   +.++      .+.+.+++.|+.++.-.+.+.            
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s---R---r~~d------~vwvaLAvlGi~lL~p~~~~~------------  142 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS---R---RLRD------FVWVALAVLGIWLLLPLGQSV------------  142 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc---c---chhh------HHHHHHHHHHHHhheeccCCc------------
Confidence            999999999999999999999999887653   2   2345      777888999999987322111            


Q ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhh
Q 044658          169 VNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLE  248 (364)
Q Consensus       169 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (364)
                               ...+..|..+++.++.||+.|.+..+|..+.. +.-.-+...+.+++++..|+......    ....++..
T Consensus       143 ---------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag----~~l~~p~l  208 (292)
T COG5006         143 ---------WSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAG----PALFSPSL  208 (292)
T ss_pred             ---------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcc----hhhcChHH
Confidence                     34468899999999999999999999998653 45678888999999999998875432    22234456


Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          249 IITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       249 ~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      ...-+.++++++.+.|.+-..++++.+....+.+..+||.++.+.|++++||++|+.||+|+.+|+.+..-..+..+|
T Consensus       209 l~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         209 LPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            666788999999999999999999999999999999999999999999999999999999999999887655554333

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.88  E-value=9.2e-24  Score=179.53  Aligned_cols=290  Identities=14%  Similarity=0.152  Sum_probs=216.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVT   84 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (364)
                      +..+|.++..++.++... .+..+..++  .+|....--|++.-++.-.|..++.+..-..+.  ....++++.|+.+ +
T Consensus        35 ~p~~gl~l~~vs~ff~~~-~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~--g~R~~LiLRg~mG-~  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVSYFFNSC-MVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPE--GKRKWLILRGFMG-F  108 (346)
T ss_pred             CCccCceehhhHHHHhhH-HHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecCC--CcEEEEEeehhhh-h
Confidence            456677888888444444 444444544  899999999988777776665544333221122  2233456788887 8


Q ss_pred             HHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccccc
Q 044658           85 LAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNH  164 (364)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~  164 (364)
                      -+....|||++|.+.++++++..+.|+++.+++|.++||+.++.+      .++..+.+.||+++.   .+.+-+.    
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv---RPpFlFG----  175 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV---RPPFLFG----  175 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe---cCCcccC----
Confidence            888889999999999999999999999999999999999999999      999999999999998   3333221    


Q ss_pred             ccccccccCCCC-CCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 044658          165 MTNDVNTMNSSK-KADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAM  243 (364)
Q Consensus       165 ~~~~~~~~~~~~-~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (364)
                          +.+.++++ ..+.+..|...++.+.++-|.-.++.|++.++.+ ......+..+.+.+.........+.  -.++.
T Consensus       176 ----~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig~--~~lP~  248 (346)
T KOG4510|consen  176 ----DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIGA--VQLPH  248 (346)
T ss_pred             ----CCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhccc--eecCc
Confidence                11111111 2355678889999999999999999999988864 3444445555555554443333221  12222


Q ss_pred             cchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          244 KGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       244 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                       ..++|+..+.+|++ +++++.+...++|+..+..+++..+.+.+++++++.+++||.|+++.|.|+++++.+.+....
T Consensus       249 -cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  249 -CGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             -cccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence             24677778888875 679999999999999999999999999999999999999999999999999999988776654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.88  E-value=9.5e-21  Score=172.60  Aligned_cols=278  Identities=17%  Similarity=0.115  Sum_probs=205.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 044658            9 PIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQY   88 (364)
Q Consensus         9 ~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (364)
                      ++++.++++++||+..+..|...  +.++.++.  |..++.+++..+....+.++  +..++.+..-+..|++ ...++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence            57889999999999999999865  57777765  77778777766655433211  2234555556666666 489999


Q ss_pred             HHHHhccccCcceeehccc-chhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccc
Q 044658           89 FFLLGFEYTTAAFSCAFIN-IVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTN  167 (364)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~  167 (364)
                      +++.++++++.+.+..+.+ +.+++..+.+.+++||+.++++  -...++|++++++|+.++...+++..+         
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~~---------  143 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSAG---------  143 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEeccccccc---------
Confidence            9999999999999999988 9999999999999999987653  111167799999998888643211110         


Q ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHH---HHHHHHHHHHHHhhcCCCccccc
Q 044658          168 DVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMAL---FGAIQSAVLSLIVERNPAGWAMK  244 (364)
Q Consensus       168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  244 (364)
                             .++..+..+|++++++++++|+.|.+..|+..  . +|.+..+.+..   .++++.....   ... ..+  .
T Consensus       144 -------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~--~  207 (290)
T TIGR00776       144 -------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG--V-DGLSVLLPQAIGMVIGGIIFNLGH---ILA-KPL--K  207 (290)
T ss_pred             -------cccccchhhHHHHHHHHHHHHHHHHHHHHHcC--C-CcceehhHHHHHHHHHHHHHHHHH---hcc-cch--H
Confidence                   00002346799999999999999999999763  3 46666444433   3333222221   111 111  2


Q ss_pred             chhhHHHHHHHHHhhhHHHHHHHHHHHh-ccCcceehcchhhhHHHHHHHHHHHhcCCccchhh----HHHHHHHHhhhh
Q 044658          245 GKLEIITIIYSGVVGSGLCYVGMAWCVE-QRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSV----VGSIIVVIGLYI  319 (364)
Q Consensus       245 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~-~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~----~G~~li~~g~~l  319 (364)
                      +...|. .+..|++ ..+++.+|..+.+ +.+++.++++.+++|+.+.+++++++||+.++.++    +|+++++.|+.+
T Consensus       208 ~~~~~~-~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       208 KYAILL-NILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI  285 (290)
T ss_pred             HHHHHH-HHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence            223343 4448877 7999999999999 99999999999999999999999999999999999    999999999988


Q ss_pred             hee
Q 044658          320 LLW  322 (364)
Q Consensus       320 ~~~  322 (364)
                      ...
T Consensus       286 ~~~  288 (290)
T TIGR00776       286 LGI  288 (290)
T ss_pred             Hhc
Confidence            754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=5.3e-19  Score=162.53  Aligned_cols=266  Identities=14%  Similarity=0.170  Sum_probs=212.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHH
Q 044658           37 HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLL  116 (364)
Q Consensus        37 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll  116 (364)
                      |..+++..+....++..+.....+   .++.++..+..++..+++. .++..+.+.|++|++.+...++.+..|+.++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            889999999988887776654333   2233455566677788886 999999999999999999999999999999999


Q ss_pred             hhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHHHHHHHH
Q 044658          117 ALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWS  196 (364)
Q Consensus       117 ~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  196 (364)
                      +++++|+|.++.+      +.++++..+|+.+....+......              .+....+...|+++.+++.++.+
T Consensus       108 ~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~--------------~~~~~~~~~~G~~ll~~sl~~~a  167 (303)
T PF08449_consen  108 GVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSS--------------SNSSSFSSALGIILLLLSLLLDA  167 (303)
T ss_pred             HHHhcCccccHHH------HHHHHHHHhhHheeeecccccccc--------------cccccccchhHHHHHHHHHHHHH
Confidence            9999999999999      999999999999998754332211              11112222349999999999999


Q ss_pred             hHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHH--hhcCCC--cccccchhhHHHHHHHHHhhhHHHHHHHHHHH
Q 044658          197 SWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLI--VERNPA--GWAMKGKLEIITIIYSGVVGSGLCYVGMAWCV  271 (364)
Q Consensus       197 ~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~  271 (364)
                      ...+.+++..++++ ++...+++...++.+...+....  .+...+  .+....+..+..++...+ +..+++.+.+...
T Consensus       168 ~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~  246 (303)
T PF08449_consen  168 FTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLI  246 (303)
T ss_pred             HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            99999999987765 67889999999999888877776  322111  111223344455555554 6778888888999


Q ss_pred             hccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCccc
Q 044658          272 EQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKE  327 (364)
Q Consensus       272 ~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~~  327 (364)
                      ++.++...+++..++.+++++++++++++++++.+|+|+++++.|..++...++|+
T Consensus       247 ~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  247 KKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999998876654

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.84  E-value=1.6e-19  Score=161.00  Aligned_cols=299  Identities=15%  Similarity=0.191  Sum_probs=232.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHHHHH----HH---hhhcCC-----------
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGL--NHLVIVAYRQIIATIFLAPVA----YF---WERKSR-----------   64 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~--~p~~~~~~r~~~~~l~l~~~~----~~---~~~~~~-----------   64 (364)
                      |...|+.++++..++|=.+.-+.+..++++.  .|+..++.....-.+.+.++.    .+   .+|.+.           
T Consensus        11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~   90 (416)
T KOG2765|consen   11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA   90 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence            3567999999999999999999999999643  499888877655555555433    11   111000           


Q ss_pred             ---------------------------C---------------------CCCHH------------HHHH-HHHHHHHHH
Q 044658           65 ---------------------------P---------------------KLTVP------------ILCQ-LFFSALTGV   83 (364)
Q Consensus        65 ---------------------------~---------------------~~~~~------------~~~~-~~~~g~~~~   83 (364)
                                                 +                     +.+.|            +..+ .+....+ .
T Consensus        91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l-W  169 (416)
T KOG2765|consen   91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL-W  169 (416)
T ss_pred             hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH-H
Confidence                                       0                     00011            3333 3344445 4


Q ss_pred             HHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccc
Q 044658           84 TLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATN  163 (364)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~  163 (364)
                      +++++.++.|+.+++++..+++.++..+|+..++.++..||++..+      ++++++++.|++++...+....      
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~~~------  237 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSKQN------  237 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEecccccc------
Confidence            8999999999999999999999999999999999999999999999      9999999999999986433211      


Q ss_pred             cccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCC---CchhHHHHHHHHHHHHHHHHHHHhhc-CCC
Q 044658          164 HMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYP---CKYSSTAIMALFGAIQSAVLSLIVER-NPA  239 (364)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  239 (364)
                                .+........|+++++++++.||+|.++.||-..+.+   |.-....+..++..+++.|..++.+. ..+
T Consensus       238 ----------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e  307 (416)
T KOG2765|consen  238 ----------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEE  307 (416)
T ss_pred             ----------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccC
Confidence                      1122445689999999999999999999998877653   33334455666666777766665544 334


Q ss_pred             cccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhh
Q 044658          240 GWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYI  319 (364)
Q Consensus       240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l  319 (364)
                      .++.++..+...+++.+.++++++-++|.+|+-..++..++..+.++...+++.+.++-|.++++.+++|.+.|++|.+.
T Consensus       308 ~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~  387 (416)
T KOG2765|consen  308 RFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVI  387 (416)
T ss_pred             cccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhh
Confidence            55666666777888889999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             heecCcc
Q 044658          320 LLWGKSK  326 (364)
Q Consensus       320 ~~~~~~~  326 (364)
                      .+.....
T Consensus       388 vn~~~~~  394 (416)
T KOG2765|consen  388 VNISSEN  394 (416)
T ss_pred             eeccccc
Confidence            9875443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.78  E-value=6.8e-19  Score=158.67  Aligned_cols=281  Identities=14%  Similarity=0.076  Sum_probs=222.8

Q ss_pred             HHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044658           16 VNLGLAAANALLKKILDG-GLN-HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLG   93 (364)
Q Consensus        16 ~~~~~~~~~~~~k~~~~~-~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   93 (364)
                      ..++--......|..++. +.+ |..++.++...+.+.++....+...+..+..++..+..++..|++. +++..+-+.+
T Consensus        25 w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~S  103 (316)
T KOG1441|consen   25 WYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVS  103 (316)
T ss_pred             HhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchh
Confidence            333334455677888873 244 9999999888888877776654444433333567788889999997 9999999999


Q ss_pred             ccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccC
Q 044658           94 FEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMN  173 (364)
Q Consensus        94 l~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~  173 (364)
                      +++.+++..+++..+.|+++.++++++.+|+.+...      +..+.....||.+.+..+.                   
T Consensus       104 l~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e~-------------------  158 (316)
T KOG1441|consen  104 LSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTEL-------------------  158 (316)
T ss_pred             hhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeeccc-------------------
Confidence            999999999999999999999999999999999999      9999999999999986332                   


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhc--cCC-CchhHHHHHHHHHHHHHH-HHHHHhhcCCC---cccccch
Q 044658          174 SSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGK--KYP-CKYSSTAIMALFGAIQSA-VLSLIVERNPA---GWAMKGK  246 (364)
Q Consensus       174 ~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~  246 (364)
                           +-+..|.+.++.+.+..+..+++.++..+  +.+ |+..+..++.-.+.+.++ |.....+.+..   .....+ 
T Consensus       159 -----~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~-  232 (316)
T KOG1441|consen  159 -----SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF-  232 (316)
T ss_pred             -----cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc-
Confidence                 22478999999999999999999999984  322 789999999999999888 66665554322   111111 


Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          247 LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       247 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      .....+.+.. ++...-+...+..+.+++|.+.++.....-++.++.++++++++.++.+..|+++.++|+++|.+.|.+
T Consensus       233 ~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~  311 (316)
T KOG1441|consen  233 VTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK  311 (316)
T ss_pred             hhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence            1223333333 445566677788999999999999999999999999999999999999999999999999999987766


Q ss_pred             ccc
Q 044658          327 EID  329 (364)
Q Consensus       327 ~~~  329 (364)
                      +++
T Consensus       312 ~~~  314 (316)
T KOG1441|consen  312 EKK  314 (316)
T ss_pred             hhc
Confidence            543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.74  E-value=8.2e-17  Score=134.87  Aligned_cols=264  Identities=14%  Similarity=0.105  Sum_probs=209.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHH
Q 044658           37 HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLL  116 (364)
Q Consensus        37 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll  116 (364)
                      ...++|.++++..++.=++..++++   .+.+......+..+++-. .+++...+.|++|+|-....+-.+.-|+=++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~---~~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKK---TEIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeeccc---ccccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            5677788888877776555433322   123333333445566654 889999999999999999999999999999999


Q ss_pred             hhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHHHHHHHH
Q 044658          117 ALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWS  196 (364)
Q Consensus       117 ~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  196 (364)
                      ++++.+++.++++      ..+++.++.||++....++...+.                 ...+...|.++.+++-..-+
T Consensus       129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~g~-----------------e~~t~g~GElLL~lSL~mDG  185 (337)
T KOG1580|consen  129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVGGA-----------------EDKTFGFGELLLILSLAMDG  185 (337)
T ss_pred             ehhhhcccccHHH------HHHHHHHHHHHHHhhccccccCCC-----------------cccccchHHHHHHHHHHhcc
Confidence            9999999999999      999999999999998654543322                 34556789999999999999


Q ss_pred             hHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhcCCC--cccccchhhHHHHHHHHHhhhHHHHHHHHHHHhc
Q 044658          197 SWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVERNPA--GWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQ  273 (364)
Q Consensus       197 ~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  273 (364)
                      +....+.+..+.+. ....++++..+++.+.+..-.++.+..++  .+....+..|+.+..+++ ++.+++.+.+..+..
T Consensus       186 lTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~  264 (337)
T KOG1580|consen  186 LTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEE  264 (337)
T ss_pred             cchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHH
Confidence            99998888776543 34678889999999888877666554222  233445677888888886 788999999999999


Q ss_pred             cCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcccc
Q 044658          274 RGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKEI  328 (364)
Q Consensus       274 ~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  328 (364)
                      .+|...+++....-.++++.++++++.+++..||+|..+++.++.+-....++.+
T Consensus       265 FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~  319 (337)
T KOG1580|consen  265 FGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAP  319 (337)
T ss_pred             hCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCc
Confidence            9999999999999999999999999999999999999999999887665544443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.71  E-value=1.4e-16  Score=121.09  Aligned_cols=134  Identities=20%  Similarity=0.233  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHH
Q 044658            9 PIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSR-PKLTVPILCQLFFSALTGVTLAQ   87 (364)
Q Consensus         9 ~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~   87 (364)
                      ..++.++++++||...++.|..++ ++||...+++|..+...++..+.....+.+. ...++|.|.++.+.|+.+ .+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence            467899999999999999999999 6999999999999999988888766544322 235789999999999887 9999


Q ss_pred             HHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhe
Q 044658           88 YFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLT  150 (364)
Q Consensus        88 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~  150 (364)
                      .+||+|++...++.+.++..+.|+++++++++++|||+|..+      |+|+.++.+|+.++.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999      999999999999876

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.67  E-value=1.4e-13  Score=123.52  Aligned_cols=298  Identities=13%  Similarity=0.097  Sum_probs=216.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHHHhhhc----CCCCC------CHHHHHH
Q 044658            8 KPIIMMVAVNLGLAAANALLKKILDGG---LNHLVIVAYRQIIATIFLAPVAYFWERK----SRPKL------TVPILCQ   74 (364)
Q Consensus         8 ~~~l~~~l~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~------~~~~~~~   74 (364)
                      ...+.++...+.++......|+.-..+   +.|....++--++-.++.....+...++    .....      .+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            456678888899999999999887655   5688888887777777766666544211    11111      3567778


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccC
Q 044658           75 LFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKG  154 (364)
Q Consensus        75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~  154 (364)
                      +.+.+++. ++.+.+++.++.+.+++..++.+++-.+.|+++.++++++|+++.|      |.++.+.++|+.++-....
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence            88888897 8888999999999999999999999999999999999999999999      9999999999999973222


Q ss_pred             CcccccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHH-HHHHHHHHHHHH
Q 044658          155 KPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMAL-FGAIQSAVLSLI  233 (364)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  233 (364)
                      +..+            +. .....++...|....+.+++..+...++.++..++.+.+..+.-.++. ++.+..+...+.
T Consensus       168 ~~~~------------a~-~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~  234 (345)
T KOG2234|consen  168 SPTG------------AK-SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILL  234 (345)
T ss_pred             CCCC------------cc-CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence            1110            00 022356778999999999999999999999999875544444444433 333333333333


Q ss_pred             hhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHH
Q 044658          234 VERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIV  313 (364)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li  313 (364)
                      .+.....+. .-...|-...+..++..+.+=.+....+|+.+-..=.....+..+++.+.++.+++.+++....+|+.++
T Consensus       235 ~d~~~i~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lV  313 (345)
T KOG2234|consen  235 QDGEAINEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLV  313 (345)
T ss_pred             ccccccccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHH
Confidence            322211111 0112222333333444555556667778888888888888899999999999999999999999999999


Q ss_pred             HHhhhhheecCcc
Q 044658          314 VIGLYILLWGKSK  326 (364)
Q Consensus       314 ~~g~~l~~~~~~~  326 (364)
                      +.++.++...+.+
T Consensus       314 i~Si~lY~~~P~~  326 (345)
T KOG2234|consen  314 ILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHHHhhcCCcc
Confidence            9999999954433

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.65  E-value=6.5e-17  Score=137.12  Aligned_cols=285  Identities=13%  Similarity=0.141  Sum_probs=213.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGLN-HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGV   83 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   83 (364)
                      +...++.+.=.-.++-...........+++++ |...+|+.+..-+++..++..+|+  +   .-+..|..+++.++.. 
T Consensus        15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~---~~~~~~~hYilla~~D-   88 (336)
T KOG2766|consen   15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--K---YIKAKWRHYILLAFVD-   88 (336)
T ss_pred             hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--H---HHHHHHHHhhheeEEe-
Confidence            44455555544455555555666666665555 999999999999999998887654  2   2234455577888887 


Q ss_pred             HHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccc
Q 044658           84 TLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATN  163 (364)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~  163 (364)
                      .-++++...|.||++...++.+-......+.+++|++++.|.++.+      +.|+.+|+.|++++...+-...      
T Consensus        89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~ag------  156 (336)
T KOG2766|consen   89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHAG------  156 (336)
T ss_pred             ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeeccc------
Confidence            7888888999999999999999998888999999999999999999      9999999999999986432211      


Q ss_pred             cccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 044658          164 HMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVER-NPAGWA  242 (364)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  242 (364)
                                ....+.+..+|+.+.++++-+||+.++..+.+.++. +...++....++++++...- +..+. ......
T Consensus       157 ----------d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~  224 (336)
T KOG2766|consen  157 ----------DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQ-FIFERHHVSTLH  224 (336)
T ss_pred             ----------cccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHH-HhhhccceeeEe
Confidence                      111245668899999999999999999999999886 47889999999999998877 44333 211111


Q ss_pred             ccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          243 MKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                        +.......+- ..++.+.-|.+.-..+|..+++..++-....-.++++.  ..||-+.+|..++....+..|.+++..
T Consensus       225 --w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  225 --WDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             --ehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence              1112222222 33344455555566688888888888888888888888  468888999999999999999999854


Q ss_pred             cC
Q 044658          323 GK  324 (364)
Q Consensus       323 ~~  324 (364)
                      ++
T Consensus       300 re  301 (336)
T KOG2766|consen  300 RE  301 (336)
T ss_pred             cc
Confidence            33

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.63  E-value=1.9e-14  Score=127.17  Aligned_cols=231  Identities=10%  Similarity=0.074  Sum_probs=168.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhh
Q 044658           68 TVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGAL  147 (364)
Q Consensus        68 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~  147 (364)
                      ++|+..++.+.+++. .+.+.+.+.++++++++..+++.++..+++++++++++|+|++.+|      |+++.+.++|+.
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence            468888899999997 9999999999999999999999999999999999999999999999      999999999999


Q ss_pred             hheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCC-chhHHHHHHHHHHHH
Q 044658          148 TLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPC-KYSSTAIMALFGAIQ  226 (364)
Q Consensus       148 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~  226 (364)
                      ++...+......       .++.....+....+...|.++.++++++.++..++.++..|+.+. .........+.+.+.
T Consensus        86 lv~~~~~~~~~~-------~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~  158 (244)
T PF04142_consen   86 LVQLSSSQSSDN-------SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILF  158 (244)
T ss_pred             eeecCCcccccc-------ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence            987532221100       000000011234556899999999999999999999999988653 333344445555555


Q ss_pred             HHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchh
Q 044658          227 SAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGS  306 (364)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~  306 (364)
                      .++.....+... .........|-...+..++...++=.+....+|+.+...=+....+..+++.++++++++.+++...
T Consensus       159 ~~~~~~~~~~~~-~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f  237 (244)
T PF04142_consen  159 NLLALLLSDGSA-ISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSF  237 (244)
T ss_pred             HHHHHhcccccc-cccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence            544433332210 0000011112222233334455566667778999999999999999999999999999999999999


Q ss_pred             hHHHHHH
Q 044658          307 VVGSIIV  313 (364)
Q Consensus       307 ~~G~~li  313 (364)
                      .+|+.++
T Consensus       238 ~lg~~~V  244 (244)
T PF04142_consen  238 LLGAALV  244 (244)
T ss_pred             hhheecC
Confidence            9998653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.61  E-value=2.2e-14  Score=109.15  Aligned_cols=136  Identities=13%  Similarity=0.116  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHH
Q 044658          184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLC  263 (364)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (364)
                      ..++++++++++++..++.|--.++. ||...+..+.++..+.+.......++ .+.....+++.|..++..|+ .++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence            56899999999999999999988876 57888999999988887777666553 22222345678888888884 79999


Q ss_pred             HHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          264 YVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       264 ~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                      +.+|+++++..+++++.++..+.|+++++++++++||+++..+++|+.+|.+|.++...
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999887653

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=3.7e-14  Score=123.81  Aligned_cols=265  Identities=14%  Similarity=0.152  Sum_probs=212.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHH
Q 044658           36 NHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFL  115 (364)
Q Consensus        36 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l  115 (364)
                      +|..+.+.+-+.+.++-......  ++.. ...++.|..+...++.+ .++..+.+.|++|++-....+-.+.--+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhc--cccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            47888888888877766444432  2222 23456677778888887 99999999999999999888888888888889


Q ss_pred             HhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHHHHHHH
Q 044658          116 LALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVW  195 (364)
Q Consensus       116 l~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  195 (364)
                      .+.++.|.|.+..+      .+...+.-.|+-+....+.+..               .....+.+..+|+.+....-++-
T Consensus       126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~s---------------~~~~g~~ns~~G~~Ll~~~L~fD  184 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSDS---------------SSKSGRENSPIGILLLFGYLLFD  184 (327)
T ss_pred             HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCCC---------------ccccCCCCchHhHHHHHHHHHHH
Confidence            99999999999999      9999999999999987644321               11123456789999999999999


Q ss_pred             HhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhcCC--CcccccchhhHHHHHHHHHhhhHHHHHHHHHHHh
Q 044658          196 SSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVERNP--AGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVE  272 (364)
Q Consensus       196 a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~  272 (364)
                      +..+..+.++.++.. ++..+++...++..+......+..+...  -.+-..++..++-++.... +..+++.+.++-++
T Consensus       185 gfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~  263 (327)
T KOG1581|consen  185 GFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIE  263 (327)
T ss_pred             hhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHh
Confidence            999999999988755 6788999999999988887744433311  1222334566777777776 57899999999999


Q ss_pred             ccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          273 QRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       273 ~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      +.++...+.++.++-.++++++.+.+|++.++.||+|..+++.|+.+-...+.+
T Consensus       264 ~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  264 RFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999887655444

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.57  E-value=1.2e-12  Score=114.28  Aligned_cols=255  Identities=16%  Similarity=0.174  Sum_probs=193.4

Q ss_pred             CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcC---CCCCCHHHHH-HHHHHHHHHHHHHHHHHHHhccccCcceeehcccc
Q 044658           34 GLN-HLVIVAYRQIIATIFLAPVAYFWERKS---RPKLTVPILC-QLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINI  108 (364)
Q Consensus        34 ~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~  108 (364)
                      +++ |..++.++.++-.++........+++.   +...+|++.. ++...++.+ ++...+.+++++|++.+..++..+.
T Consensus        41 ~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSS  119 (349)
T KOG1443|consen   41 NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSS  119 (349)
T ss_pred             CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeecccc
Confidence            355 899999888877777665544333322   2245666665 456778776 8899999999999999999999999


Q ss_pred             hhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHH
Q 044658          109 VPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVL  188 (364)
Q Consensus       109 ~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  188 (364)
                      .++|+.+++.++.-||.++.-      ..-+.++.+|+.+.+. ++.++                       +..|..+.
T Consensus       120 si~FIllFs~if~lEk~~w~L------~l~v~lI~~Glflft~-KsTqf-----------------------~i~Gf~lv  169 (349)
T KOG1443|consen  120 SILFILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTY-KSTQF-----------------------NIEGFFLV  169 (349)
T ss_pred             HHHHHHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEe-cccce-----------------------eehhHHHH
Confidence            999999999999999999998      8888888899998885 33222                       36788888


Q ss_pred             HHHHHHHHhHHHHHHHHhccCC----CchhHHHHHHHHHHHHHHHHHHHhhcCCC-----cccccch-hhHHHHHHHHHh
Q 044658          189 IAFTVVWSSWFLIQARIGKKYP----CKYSSTAIMALFGAIQSAVLSLIVERNPA-----GWAMKGK-LEIITIIYSGVV  258 (364)
Q Consensus       189 l~a~~~~a~~~i~~k~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~l~~~~~~  258 (364)
                      +.+.++-++-..+.+.+.++.+    +|....+...-...+.++|..+..|+...     .+...++ ..+..+..++. 
T Consensus       170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-  248 (349)
T KOG1443|consen  170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-  248 (349)
T ss_pred             HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-
Confidence            8888887777777776665533    68888999999999999999988887321     1222222 12333333322 


Q ss_pred             hhHHHHHH---HHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhh
Q 044658          259 GSGLCYVG---MAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYIL  320 (364)
Q Consensus       259 ~~~~~~~~---~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~  320 (364)
                      +..+++.+   -+.-+.+++....++..-..-+-+.+++..+.+|+++...|.|..+...|+..+
T Consensus       249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            33344332   344577788899999999999999999999999999999999999999999998

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.57  E-value=1.4e-12  Score=115.47  Aligned_cols=287  Identities=12%  Similarity=0.103  Sum_probs=218.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHH--HHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 044658            7 WKPIIMMVAVNLGLAAANALLKKILDGGLN-HLVIVA--YRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGV   83 (364)
Q Consensus         7 ~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~-p~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   83 (364)
                      .+.....+...+.=-...+..|..+.. .+ |..+..  ++.+.+.+.+...-.. +--+.++.+++..++.+...++. 
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf-   87 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLF-   87 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHH-
Confidence            344444554555555566777888874 44 555444  7777776666554321 12345567889999989999996 


Q ss_pred             HHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccc
Q 044658           84 TLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATN  163 (364)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~  163 (364)
                      .++...-..+++|++.+..+++.+..|+++++.+..++|.+++...      +.++....+|.......+. ..      
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d~-sf------  154 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTDL-SF------  154 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhccccc-ee------
Confidence            8899999999999999999999999999999999999999999999      9999999998888764221 11      


Q ss_pred             cccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhcCC----
Q 044658          164 HMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVERNP----  238 (364)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  238 (364)
                                       +..|..+++...++-+.+.+..|+..+..+ +.+...++..+.+...+....++.+...    
T Consensus       155 -----------------~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~  217 (314)
T KOG1444|consen  155 -----------------NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL  217 (314)
T ss_pred             -----------------cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh
Confidence                             244899999999999999999998877644 5677888999998888887776665411    


Q ss_pred             CcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhh
Q 044658          239 AGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLY  318 (364)
Q Consensus       239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~  318 (364)
                      ..........+..+...++++.++.|. -.+..+..+++..++++..+-..+.+-..++.+++.++...+|..+-++|-.
T Consensus       218 ~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv  296 (314)
T KOG1444|consen  218 NFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGV  296 (314)
T ss_pred             hcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhh
Confidence            111122234567777777766555555 7788899999999999988888888888888899999999999999999999


Q ss_pred             hheecCccc
Q 044658          319 ILLWGKSKE  327 (364)
Q Consensus       319 l~~~~~~~~  327 (364)
                      ++.+.+.++
T Consensus       297 ~Y~~~~~~~  305 (314)
T KOG1444|consen  297 LYSYATFRK  305 (314)
T ss_pred             HHhhhhhhh
Confidence            998766443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.53  E-value=3.1e-14  Score=122.20  Aligned_cols=264  Identities=16%  Similarity=0.125  Sum_probs=204.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhc----CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchh
Q 044658           37 HLVIVAYRQIIATIFLAPVAYFWERK----SRP--KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVP  110 (364)
Q Consensus        37 p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p  110 (364)
                      |..+++.++++...+...+-....+.    ..+  +.+.+..+.+.-.++.. .+...+-+++++|++++...+-.++..
T Consensus        61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchhh
Confidence            99999999999887776665432221    112  23455556666677775 777778889999999999999999999


Q ss_pred             HHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHH
Q 044658          111 VSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIA  190 (364)
Q Consensus       111 i~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~  190 (364)
                      +|++++.++++|+|-+...      ..++.+++.|..+=...++..                     +.-...|.+++++
T Consensus       140 vFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvdqE~~~---------------------~~ls~~GvifGVl  192 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVDQEGST---------------------GTLSWIGVIFGVL  192 (347)
T ss_pred             hHHHHhHHhhccccccccc------ceeehhheehheecccccccc---------------------CccchhhhHHHHH
Confidence            9999999999999999999      888888888887766433332                     2234789999999


Q ss_pred             HHHHHHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhc--CCCccccc-chhhHHHHHHHHHhhhHHHHHH
Q 044658          191 FTVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVER--NPAGWAMK-GKLEIITIIYSGVVGSGLCYVG  266 (364)
Q Consensus       191 a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~  266 (364)
                      +.++-|+..+..|+...... .-..++++..+.+.++.+|...+.+.  ....++.. ....|..+...|+++..++|. 
T Consensus       193 aSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyv-  271 (347)
T KOG1442|consen  193 ASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYV-  271 (347)
T ss_pred             HHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhe-
Confidence            99999999999998776655 35678889999999999998887654  11122222 345666666666655444443 


Q ss_pred             HHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCccccc
Q 044658          267 MAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKEID  329 (364)
Q Consensus       267 ~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  329 (364)
                      -.+-+|.++|.+.++-..-......+++..+++|.-+...|-|-+++++|-.++.+.|..+.+
T Consensus       272 Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~  334 (347)
T KOG1442|consen  272 TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMR  334 (347)
T ss_pred             eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence            455688899999999999999999999999999999999999999999999999886654433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.52  E-value=2.6e-14  Score=113.57  Aligned_cols=125  Identities=25%  Similarity=0.369  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 044658           18 LGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYT   97 (364)
Q Consensus        18 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~   97 (364)
                      ++||...++.|...++ .||...+++|+..+.+ ++++....+++...+.+++++......+.++..+++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999985 9999999999999998 6666555554444567788888888888886699999999999999


Q ss_pred             CcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhe
Q 044658           98 TAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLT  150 (364)
Q Consensus        98 ~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~  150 (364)
                      +++.++++.++.|+++.+++++++||++++.+      ++|+.+++.|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999      999999999998874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.45  E-value=4.5e-13  Score=106.34  Aligned_cols=125  Identities=23%  Similarity=0.426  Sum_probs=107.8

Q ss_pred             HHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHh
Q 044658          193 VVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVE  272 (364)
Q Consensus       193 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~  272 (364)
                      ++||.+.+..|+..++. ++.....+++..+.+ ..+.....+...  ....+...+...++.+++++..++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            47899999999999986 589999999999998 666655554322  33445567788888898888999999999999


Q ss_pred             ccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          273 QRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       273 ~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      +.+++.++.+.+++|+++.+++++++||++++.+++|+++++.|+.+..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.40  E-value=3.1e-11  Score=104.25  Aligned_cols=279  Identities=11%  Similarity=0.098  Sum_probs=196.9

Q ss_pred             HHHHHHHHHHHh---cCC----ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC-------------HHHHHHHHHHHH
Q 044658           21 AAANALLKKILD---GGL----NHLVIVAYRQIIATIFLAPVAYFWERKSRPKLT-------------VPILCQLFFSAL   80 (364)
Q Consensus        21 ~~~~~~~k~~~~---~~~----~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~-------------~~~~~~~~~~g~   80 (364)
                      ..+.+..|+.-+   ++-    +|+..+..-++.-.+++..+.+.+.+.+.+...             -+. ...+...+
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHH
Confidence            445566676532   222    378888777777778888887766554332111             111 12334677


Q ss_pred             HHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccc
Q 044658           81 TGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLG  160 (364)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~  160 (364)
                      +. ..+..+.|.|+.+++++..+++.....+|+.+++.-+++.+++.++      |+|+....+|++++...+-...   
T Consensus        95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~~---  164 (372)
T KOG3912|consen   95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHLV---  164 (372)
T ss_pred             HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeecccc---
Confidence            76 8888999999999999999999999999999999999999999999      9999999999999975321100   


Q ss_pred             ccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhc-CC
Q 044658          161 ATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVER-NP  238 (364)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  238 (364)
                                 ..+-.+-.+...|+++.+++-+.-|+.+++.+|..++.+ +|.....+..+++.+.+..+...... +.
T Consensus       165 -----------~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~  233 (372)
T KOG3912|consen  165 -----------TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPS  233 (372)
T ss_pred             -----------cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheec
Confidence                       000111345678999999999999999999999888765 78999999999996655444433221 00


Q ss_pred             C-cccccc---hhhHH---------HHHHHHHhhhHHHHHHHHH----HHhccCcceehcchhhhHHHHHHHHHHHhcCC
Q 044658          239 A-GWAMKG---KLEII---------TIIYSGVVGSGLCYVGMAW----CVEQRGPVFTSAFTPLIQIFVAIVGFFILHER  301 (364)
Q Consensus       239 ~-~~~~~~---~~~~~---------~l~~~~~~~~~~~~~~~~~----a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~  301 (364)
                      . .+...+   ...|.         ..++++..+..++..+++.    ..|..++++-.++-.+...+--+++.....|.
T Consensus       234 ~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~  313 (372)
T KOG3912|consen  234 GDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEY  313 (372)
T ss_pred             CCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHH
Confidence            0 110000   01111         1223333333344333333    35677888888999999999999999999999


Q ss_pred             ccchhhHHHHHHHHhhhhhe
Q 044658          302 IYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       302 ~~~~~~~G~~li~~g~~l~~  321 (364)
                      ++..|+.|..+.+.|+++++
T Consensus       314 f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  314 FHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.37  E-value=5.4e-12  Score=105.34  Aligned_cols=273  Identities=15%  Similarity=0.166  Sum_probs=199.6

Q ss_pred             HHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCccee
Q 044658           25 ALLKKILDG-GLN-HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFS  102 (364)
Q Consensus        25 ~~~k~~~~~-~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~  102 (364)
                      +-.|+.+.. |++ -+.+.+++.+...+-+..+-..+.-+    .+.++....+..+++. ....+.-..+++|++.+..
T Consensus        23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~----fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpiY   97 (309)
T COG5070          23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE----FRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVPIY   97 (309)
T ss_pred             HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh----eehhhhhhhcCHHHHH-HHHHHhcccceeeeeeeHH
Confidence            344554431 222 56666777766666555544322211    2233333444566664 6777778899999999999


Q ss_pred             ehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCch
Q 044658          103 CAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWA  182 (364)
Q Consensus       103 ~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (364)
                      +++.++..+.++.....+++.|++-.+      ..+.++.+..-+.-.+.+......                 +.+..+
T Consensus        98 TiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~~~-----------------~~~~lN  154 (309)
T COG5070          98 TIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQASAF-----------------KAQILN  154 (309)
T ss_pred             HHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHHHH-----------------HhcccC
Confidence            999999999999999999999999999      998888888877777644322211                 234556


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhcCCCc--ccccchhhHHHHHHHHHhh
Q 044658          183 IGSIVLIAFTVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVERNPAG--WAMKGKLEIITIIYSGVVG  259 (364)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~  259 (364)
                      .|.+++...++..+.+....|+..+-.+ .....++|..+.+..+++...+..+.....  ....+.....+++..|+..
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s  234 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS  234 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence            7999999999999999998887765432 357889999999998888888887752221  1222334556777777754


Q ss_pred             hHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          260 SGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       260 ~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      .+++ ++-.|.++.++.+..+++..++-.-..+-|.++++|+.+...+..+.+-..+-.++...+++
T Consensus       235 vgiS-y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         235 VGIS-YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             hhhh-hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444 45889999999999999999999999999999999999999999998888777777665544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.34  E-value=7.3e-10  Score=97.76  Aligned_cols=254  Identities=17%  Similarity=0.145  Sum_probs=176.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehccc-chhHHH
Q 044658           35 LNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFIN-IVPVST  113 (364)
Q Consensus        35 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi~~  113 (364)
                      -+|....+--.+.+.++-+.... ..++.. ..+.+.+...++.|++- .+++..++.++++..++.+.++.. ++-+.+
T Consensus        10 G~~~~Q~lG~t~Gali~alv~~~-~~~p~~-~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~   86 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVVFL-FRQPAF-SMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGT   86 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHH-HhCCCc-chHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHH
Confidence            34555555444444444443333 222221 12347888888999996 999999999999999999999976 888889


Q ss_pred             HHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHHHHH
Q 044658          114 FLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTV  193 (364)
Q Consensus       114 ~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~  193 (364)
                      .+.++++++|--+..+  .-...+++++.++|+.+....++....                +++..+...|.+..+++.+
T Consensus        87 sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts~~~~~~~~----------------~~~~~~~~kgi~~Ll~sti  148 (269)
T PF06800_consen   87 SLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTSYQDKKSDK----------------SSSKSNMKKGILALLISTI  148 (269)
T ss_pred             HHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhccccccccc----------------cccccchhhHHHHHHHHHH
Confidence            9999999999888776  111133788889999988764433211                1124556789999999999


Q ss_pred             HHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhc
Q 044658          194 VWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQ  273 (364)
Q Consensus       194 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  273 (364)
                      .|..|.+..|...  . ++.....-+.+-..+....+....+..  .+   ....| .-+..|+ .-.+++.++..+.+.
T Consensus       149 gy~~Y~~~~~~~~--~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~---~k~~~-~nil~G~-~w~ignl~~~is~~~  218 (269)
T PF06800_consen  149 GYWIYSVIPKAFH--V-SGWSAFLPQAIGMLIGAFIFNLFSKKP--FF---EKKSW-KNILTGL-IWGIGNLFYLISAQK  218 (269)
T ss_pred             HHHHHHHHHHhcC--C-ChhHhHHHHHHHHHHHHHHHhhccccc--cc---ccchH-HhhHHHH-HHHHHHHHHHHhHHh
Confidence            9999999877632  2 456666655554444444443332111  11   12233 3345554 456889999999999


Q ss_pred             cCcceehcchhhhHHHHHHHHHHHhcCCccch----hhHHHHHHHHhhhh
Q 044658          274 RGPVFTSAFTPLIQIFVAIVGFFILHERIYPG----SVVGSIIVVIGLYI  319 (364)
Q Consensus       274 ~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~----~~~G~~li~~g~~l  319 (364)
                      .+.+..=.+..+.++++.+.+.+++||+=+..    .++|.+++++|.++
T Consensus       219 ~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  219 NGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             ccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999998765    45688888777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.30  E-value=4.7e-11  Score=107.42  Aligned_cols=134  Identities=18%  Similarity=0.331  Sum_probs=114.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGLN--HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTG   82 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~--p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   82 (364)
                      ...+|.++.++++++|+...+..|+..++ .+  +.....+++.++.+++.++.....+  .+..+.+++...+..++++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGP--NPQALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCC--CCCcchHHHHHHHHHHHHH
Confidence            45689999999999999999999998873 66  4455557899999988888754332  2234667787788888887


Q ss_pred             HHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhh
Q 044658           83 VTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGAL  147 (364)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~  147 (364)
                      ...++.++++++++.+++.++.+.++.|++++++++++++|+++..+      +.|+.+.+.|+.
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence            78999999999999999999999999999999999999999999999      999999999873

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.19  E-value=1.1e-09  Score=99.67  Aligned_cols=277  Identities=17%  Similarity=0.198  Sum_probs=160.2

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CCCHHHH-HHHHHHHHH
Q 044658            4 CRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRP-KLTVPIL-CQLFFSALT   81 (364)
Q Consensus         4 ~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~-~~~~~~g~~   81 (364)
                      .+...|..+.+.++++.+....+-|+...+ .+                       +...+. ...++.+ ...++.|++
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~-----------------------~~~~~~~~~~~~~l~~~~W~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LP-----------------------RGSLRAGSGGRSYLRRPLWWIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-----------------------cccccccchhhHHHhhHHHHHHHH
Confidence            356779999999999999999999987653 10                       000001 0111222 234566776


Q ss_pred             HHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccc
Q 044658           82 GVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGA  161 (364)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~  161 (364)
                      ...++..+.+.|+.+.|++.++++..+.-++.++++..++|||+++.+      +.|+.+++.|..++......+.+.. 
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~~~~-  131 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEEPIH-  131 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCCCcC-
Confidence            668888999999999999999999999999999999999999999999      9999999999998875432221110 


Q ss_pred             cccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHH-------HHHHHh
Q 044658          162 TNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSA-------VLSLIV  234 (364)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  234 (364)
                          +.   ++-...-.+........ +...+...+.....+|..++  +...........++...+       .+....
T Consensus       132 ----t~---~~l~~~~~~~~fl~y~~-~~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~  201 (300)
T PF05653_consen  132 ----TL---DELIALLSQPGFLVYFI-LVLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTF  201 (300)
T ss_pred             ----CH---HHHHHHhcCcceehhHH-HHHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHh
Confidence                00   00000000000011111 11111222222222222221  111111111122221111       111111


Q ss_pred             hcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhH-HHHHHHHHHHhcCCcc--c----hhh
Q 044658          235 ERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQ-IFVAIVGFFILHERIY--P----GSV  307 (364)
Q Consensus       235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~p-v~~~~~~~~~l~e~~~--~----~~~  307 (364)
                      . ....+  ..+..|..++. .+.+........++++++.+++.+.++.+..= ..+++-+.++++|.-+  .    ...
T Consensus       202 ~-g~~~f--~~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~  277 (300)
T PF05653_consen  202 S-GDNQF--TYPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFL  277 (300)
T ss_pred             c-Cchhh--hhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHH
Confidence            1 11111  12234443333 33456677788899999999999888776654 5555666677887643  3    356


Q ss_pred             HHHHHHHHhhhhheecCc
Q 044658          308 VGSIIVVIGLYILLWGKS  325 (364)
Q Consensus       308 ~G~~li~~g~~l~~~~~~  325 (364)
                      .|+.+++.|+++....|+
T Consensus       278 ~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  278 CGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHhhheeeccCc
Confidence            788888999988876543

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.18  E-value=2e-10  Score=99.23  Aligned_cols=265  Identities=9%  Similarity=0.012  Sum_probs=179.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-cCcceeehcccchhHHHHH
Q 044658           37 HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEY-TTAAFSCAFINIVPVSTFL  115 (364)
Q Consensus        37 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~l  115 (364)
                      -..++|.+++.-++-=+++.- .-...+++.+.|++.....  .+  +..+.+-++++++ ++...-.++.+-.++.++.
T Consensus        33 gNLITFaqFlFia~eGlif~s-kf~~~k~kiplk~Y~i~V~--mF--F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~  107 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTS-KFFTVKPKIPLKDYAITVA--MF--FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI  107 (330)
T ss_pred             eeehHHHHHHHHHHhceeeec-cccccCCCCchhhhheehh--ee--eeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence            356667666655444333321 1112224556666664332  22  5667788899988 7888889999999999999


Q ss_pred             HhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccccccccccc-ccCCCCCCCCchHHHHHHHHHHHH
Q 044658          116 LALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVN-TMNSSKKADDWAIGSIVLIAFTVV  194 (364)
Q Consensus       116 l~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~l~a~~~  194 (364)
                      ++++++++|.+.+|      +.++++..+|+.+.++.+..+...      ..++- +++.......+..|+.+..++-+.
T Consensus       108 ~g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~------~~~~l~~~~~~~~~~~w~iGi~lL~~al~~  175 (330)
T KOG1583|consen  108 LGWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS------KLSGLDSGSAQSDFFWWLIGIALLVFALLL  175 (330)
T ss_pred             HHHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh------hhcccccCcccccchHHHHHHHHHHHHHHH
Confidence            99999999999999      999999999999998765443321      01111 222233445567899999999999


Q ss_pred             HHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhh--------cC---CCcccccchhhHHHHHHHHHhhhHH
Q 044658          195 WSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVE--------RN---PAGWAMKGKLEIITIIYSGVVGSGL  262 (364)
Q Consensus       195 ~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~l~~~~~~~~~~  262 (364)
                      .|.-.+.++..-+++. ++-+.+++.-+......+...--..        .+   .+.....-|..|..++.     ..+
T Consensus       176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~-----n~L  250 (330)
T KOG1583|consen  176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF-----NVL  250 (330)
T ss_pred             HHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHH-----HHH
Confidence            9998888887777655 6777888887766544333221000        00   00111112445555433     334


Q ss_pred             HHHHHHHHHh----ccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheec
Q 044658          263 CYVGMAWCVE----QRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       263 ~~~~~~~a~~----~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~  323 (364)
                      .++...+++.    +.++.++++...++-.++.+++.+.++.++++.-|+|..++++|.+++.-.
T Consensus       251 ~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  251 TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4444444443    456778889999999999999999999999999999999999999998643

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.18  E-value=1.1e-10  Score=95.77  Aligned_cols=213  Identities=13%  Similarity=0.087  Sum_probs=158.5

Q ss_pred             HHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccc
Q 044658           84 TLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATN  163 (364)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~  163 (364)
                      .+.++.|..|++.++++.++.+..+.-.|+.+++++.+++|+...+      +++.++++.|++++.+.++.        
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN~--------  129 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADNE--------  129 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccch--------
Confidence            7789999999999999999999999999999999999999999999      99999999999999865543        


Q ss_pred             cccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCC--CchhHHHHHHHHHH-HHHHHHHHHhhcCCCc
Q 044658          164 HMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYP--CKYSSTAIMALFGA-IQSAVLSLIVERNPAG  240 (364)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (364)
                                    ..+.+.|+.+++.++..-|+|-+.-|+.....+  +....+.-..++.. +...+.........+.
T Consensus       130 --------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~  195 (290)
T KOG4314|consen  130 --------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEH  195 (290)
T ss_pred             --------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHH
Confidence                          344589999999999999999999998876533  21111111111111 1222222111111222


Q ss_pred             ccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhh
Q 044658          241 WAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYIL  320 (364)
Q Consensus       241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~  320 (364)
                      +.......|..+...+.+ +..-+++.+.++..+.|...++-+.....-....+.++-+-..+...+.|.++|+.|.++.
T Consensus       196 ~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi  274 (290)
T KOG4314|consen  196 LQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI  274 (290)
T ss_pred             HHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence            221122346776666654 3344566888999999999999999998889999987666678889999999999999888


Q ss_pred             eecCc
Q 044658          321 LWGKS  325 (364)
Q Consensus       321 ~~~~~  325 (364)
                      .....
T Consensus       275 iiP~d  279 (290)
T KOG4314|consen  275 IIPED  279 (290)
T ss_pred             ecccc
Confidence            76443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.17  E-value=3e-11  Score=94.26  Aligned_cols=104  Identities=22%  Similarity=0.351  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhh
Q 044658           42 AYRQIIATIFLAPVAYFWERKS--RPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALP  119 (364)
Q Consensus        42 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~  119 (364)
                      .+|+..+.+++..+...+++.+  .+..+++++.+....|+++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5788899888888776643321  12234466677777788875599999999999999 58889999999999999999


Q ss_pred             hccccccccccccccchhHHHHHHhhhhhheec
Q 044658          120 FRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLY  152 (364)
Q Consensus       120 ~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~  152 (364)
                      ++|||+++++      +.++.++++|+.++...
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence            9999999999      99999999999999853

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.17  E-value=1.3e-08  Score=93.47  Aligned_cols=300  Identities=13%  Similarity=0.048  Sum_probs=180.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH-HHHHHHHHHH---HHHHHhh-hcCCCCCCHHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAY-RQIIATIFLA---PVAYFWE-RKSRPKLTVPILCQLFFSA   79 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~-r~~~~~l~l~---~~~~~~~-~~~~~~~~~~~~~~~~~~g   79 (364)
                      +...|++..+++.++||+..+..|+. . ..+-..+ .. -.+++.++.-   .....+. .......+.+.+...++.|
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKV-K-KWSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhccccccccc-C-CCchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            56789999999999999999999984 3 2441111 11 1111111111   0110000 0111224577888888899


Q ss_pred             HHHHHHHHHHHHHhccccCcceeehccc-chhHHHHHHhhhhccccc---cccccccccchhHHHHHHhhhhhheeccCC
Q 044658           80 LTGVTLAQYFFLLGFEYTTAAFSCAFIN-IVPVSTFLLALPFRLEKL---NMKSLDGRSKVLGAIVCIGGALTLTLYKGK  155 (364)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~~l~e~~---~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~  155 (364)
                      ++- ..++..++.++++...+.+..+.. ++-+...++..++++|=.   +..+  +..-.+|+++.++|+++.......
T Consensus        81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence            996 999999999999999999977754 888999999999988643   2222  333478899999999999852211


Q ss_pred             cccccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHH-------HHHHHHhccCCCchhHHHHHHH---HHHH
Q 044658          156 PFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWF-------LIQARIGKKYPCKYSSTAIMAL---FGAI  225 (364)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------i~~k~~~~~~~~~~~~~~~~~~---~~~~  225 (364)
                      ..+.           ...++.++.+..+|++.++++++.++.|.       ...+...+...++......+..   .+.+
T Consensus       158 k~~~-----------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        158 KERK-----------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGA  226 (345)
T ss_pred             cccc-----------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHH
Confidence            1100           00000224567899999999999999999       4333321111133333333333   3333


Q ss_pred             HHH-HHHHHh--h-cCCCcccc--cchhhHHHH----HHHHHhhhHHHHHHHHHHHhccCcceehc----chhhhHHHHH
Q 044658          226 QSA-VLSLIV--E-RNPAGWAM--KGKLEIITI----IYSGVVGSGLCYVGMAWCVEQRGPVFTSA----FTPLIQIFVA  291 (364)
Q Consensus       226 ~~~-~~~~~~--~-~~~~~~~~--~~~~~~~~l----~~~~~~~~~~~~~~~~~a~~~~~~~~~s~----~~~l~pv~~~  291 (364)
                      +.- .+....  . +.......  .+...+..-    +..|+ .=.+++++|..+..+.+......    .+.+..+++.
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist  305 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN  305 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence            222 222211  1 11111111  111122222    23332 35567788888888776544433    3478889999


Q ss_pred             HHHHHHhcCCcc------chhhHHHHHHHHhhhhheec
Q 044658          292 IVGFFILHERIY------PGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       292 ~~~~~~l~e~~~------~~~~~G~~li~~g~~l~~~~  323 (364)
                      +++. ++||.=+      ..-++|++++++|..+....
T Consensus       306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            9998 5999866      45689999999998887654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.16  E-value=5.9e-10  Score=102.23  Aligned_cols=138  Identities=14%  Similarity=0.120  Sum_probs=109.8

Q ss_pred             CchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCccc--ccchhhHHHHHHHHH
Q 044658          180 DWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWA--MKGKLEIITIIYSGV  257 (364)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~  257 (364)
                      +..+|++++++++++|+...+..|.. .+. +|.+..++++.++.+.+.+......+ .....  ..+...+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHHH
Confidence            45789999999999999999999875 454 58999999999998877666544321 11100  0112222 2333566


Q ss_pred             hhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          258 VGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       258 ~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      ++....+.++++++++.+++.++++.++.|+++.+++++++||+++..+++|+++.++|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            6677889999999999999999999999999999999999999999999999999999998875

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.13  E-value=1.2e-09  Score=90.00  Aligned_cols=138  Identities=16%  Similarity=0.195  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhccC------CCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc--------c-chhh
Q 044658          184 GSIVLIAFTVVWSSWFLIQARIGKKY------PCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAM--------K-GKLE  248 (364)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~  248 (364)
                      |.++++.+.++.+++.++.|+..++.      .++..+..+....+.+.+.+..+..+........        . .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988772      2789999999999999999998888763211110        0 2244


Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          249 IITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       249 ~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                      +..++..++ .....+...+..+++.+|...+++..+..+...+++++++||+++..+++|+.+.++|.+++.+
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            555555555 4556777788999999999999999999999999999999999999999999999999998864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.10  E-value=1.7e-09  Score=99.14  Aligned_cols=138  Identities=12%  Similarity=0.054  Sum_probs=113.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTL   85 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (364)
                      ...|.++.+.++++|+...+..|+..+ +.++...... ..++.+++.++......  ....+...+...+..|+++..+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGA-EHGPATVAIG-SLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHH-HHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence            346899999999999999999999876 4788776544 45566666666543221  2224556666667788888789


Q ss_pred             HHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheecc
Q 044658           86 AQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYK  153 (364)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~  153 (364)
                      ++.++++++++.+++.++++.++.|+++.++++++++|+++..+      ++|..+.+.|++......
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999      999999999999997544

>TIGR00688 rarD rarD protein

Probab=99.09  E-value=1.6e-09  Score=97.26  Aligned_cols=136  Identities=14%  Similarity=0.160  Sum_probs=106.6

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCC---Ccccccchhh-HHHHHHHHHh
Q 044658          183 IGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNP---AGWAMKGKLE-IITIIYSGVV  258 (364)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~~~~  258 (364)
                      +|.++.++++++|+...+..|.. .+. +|.+..+++++++.+.+.+......+..   .......... +..+...|+ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            38899999999999999999984 444 6899999999999887766554432110   0111111222 333444554 


Q ss_pred             hhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          259 GSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       259 ~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      .....+.++++++++++++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999999999999999999999999999999999999999999988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.07  E-value=1.7e-09  Score=99.00  Aligned_cols=138  Identities=15%  Similarity=0.099  Sum_probs=114.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTL   85 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (364)
                      ...|.++.++++++|+...+..|....  -++...+.+++.++.+.+.++............+.+.|..+...++++..+
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence            356999999999999999999998643  345566778888888887777653322111123567788888888887789


Q ss_pred             HHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           86 AQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      ++.++++++++.+++.++.+..+.|++++++++++++|+++..+      ++|..+.+.|+.+...
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999      9999999999999864

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.06  E-value=3.1e-09  Score=99.39  Aligned_cols=139  Identities=9%  Similarity=0.120  Sum_probs=106.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCCHHHHHHHHHHHHH
Q 044658            7 WKPIIMMVAVNLGLAAANALLKKILDGGLN-HLVIVAYRQIIATIFLAPVAYFWERKSR----PKLTVPILCQLFFSALT   81 (364)
Q Consensus         7 ~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~   81 (364)
                      ..|.++++.++++|+.+.++.|....+ .+ +...+++.+.++.+.+.+......+...    ...+...+ ..+..++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLI-TIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHH-HHHHHHHH
Confidence            347889999999999999999988775 64 4566777777776666555443322111    11222222 23345555


Q ss_pred             HHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccC
Q 044658           82 GVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKG  154 (364)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~  154 (364)
                      . .+++.++++++++.+++.++++.++.|++++++++++++|+++..+      ++|..+.+.|+++....++
T Consensus       266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhhh
Confidence            4 6789999999999999999999999999999999999999999999      9999999999999975433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.04  E-value=7.8e-09  Score=94.13  Aligned_cols=134  Identities=16%  Similarity=0.209  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHH
Q 044658          185 SIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCY  264 (364)
Q Consensus       185 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  264 (364)
                      ..+.++++++++...+..|+..++. ++  ...+......+...+....... ...+...+ ..++.....+.++....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            4678999999999999999887663 22  3455555666666665544211 12233222 334444445555678889


Q ss_pred             HHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheec
Q 044658          265 VGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       265 ~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~  323 (364)
                      .+++++.++.+++.++++.+++|+++.+++++++||+++..+++|+.+++.|+.+....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999887643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=99.01  E-value=2e-10  Score=97.63  Aligned_cols=280  Identities=16%  Similarity=0.155  Sum_probs=195.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 044658            8 KPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQ   87 (364)
Q Consensus         8 ~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (364)
                      ..++.+++-++.||+.+....+.   +-.|.+.+.--.+.+.++-+.++++    ..|..+.+.+..-++.|.+- ..++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence            35678899999999998887766   5677777766555555554444433    23456778888888888885 9999


Q ss_pred             HHHHHhccccCcceeehccc-chhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccccccc
Q 044658           88 YFFLLGFEYTTAAFSCAFIN-IVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMT  166 (364)
Q Consensus        88 ~~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~  166 (364)
                      ..++.|+++..++.+.++.. ++-+-+.+.+++.++|=.+..+  -....+++++.+.|+.+-...+..+          
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs~~~~~n----------  141 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTSKQDRNN----------  141 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEeeeecccc----------
Confidence            99999999999999999976 8888999999999999888776  1111245677777887776533211          


Q ss_pred             ccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccch
Q 044658          167 NDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGK  246 (364)
Q Consensus       167 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (364)
                            -+.++.++...|....+.+.+.|-.|.+..+...-+.-+...-....+..+++.   +... +.     +....
T Consensus       142 ------k~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali---~~~~-~~-----~~~~~  206 (288)
T COG4975         142 ------KEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALI---LGFF-KM-----EKRFN  206 (288)
T ss_pred             ------ccccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHH---Hhhc-cc-----ccchH
Confidence                  111234567889999999999999999988766533213232223333333322   2221 11     11122


Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchh----hHHHHHHHHhhhhhee
Q 044658          247 LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGS----VVGSIIVVIGLYILLW  322 (364)
Q Consensus       247 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~----~~G~~li~~g~~l~~~  322 (364)
                      +..+.-+..|.+ =..++..+..+.++.+..+.=-+..+..+++.+-+.++++|+=+..+    ++|++++++|..+...
T Consensus       207 K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         207 KYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             HHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            333444555653 56788889999998888777778888899999999999999988765    5788888888776654


Q ss_pred             c
Q 044658          323 G  323 (364)
Q Consensus       323 ~  323 (364)
                      .
T Consensus       286 ~  286 (288)
T COG4975         286 A  286 (288)
T ss_pred             e
Confidence            3

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.00  E-value=3.9e-09  Score=96.79  Aligned_cols=133  Identities=15%  Similarity=0.108  Sum_probs=105.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 044658            7 WKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLA   86 (364)
Q Consensus         7 ~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (364)
                      ..|.++++.++++|+...++.|...+ +.++....+   ..+.+.+.+..... .......+...|..++..++.. .++
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~t-~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLS-PQPAMVFSLPAIIKLLLAAAAM-GFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHh-cCccccCCHHHHHHHHHHHHHH-HHH
Confidence            45889999999999999999999876 477765433   23333333333222 2112235567777777777654 889


Q ss_pred             HHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           87 QYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        87 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      +.++++++++.+++.++.+.++.|++..++++++++|+++..+      ++|..+++.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999999999      9999999999988864

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.98  E-value=2e-08  Score=86.71  Aligned_cols=262  Identities=11%  Similarity=0.081  Sum_probs=186.4

Q ss_pred             CCCh--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhH
Q 044658           34 GLNH--LVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPV  111 (364)
Q Consensus        34 ~~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi  111 (364)
                      ++.|  +.+++.++++-..+-+...... +.++.   ...|+.+..++.+. .....+..-++.|++-..-.++..+--+
T Consensus        70 gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r---~iP~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKli  144 (367)
T KOG1582|consen   70 GFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRR---VIPWRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLI  144 (367)
T ss_pred             cCcccchHHHHHHHHHHHhhhheEEEee-cccce---ecchhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhh
Confidence            3553  4566666655444333322111 11222   23344444555554 6677777888888887777788877777


Q ss_pred             HHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHHH
Q 044658          112 STFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAF  191 (364)
Q Consensus       112 ~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  191 (364)
                      =+++.+.++-+.|.++.+      .++..+..+|+.+.++.++...                    .+-+..|+.+.-.|
T Consensus       145 PVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~~s--------------------PNF~~~Gv~mIsgA  198 (367)
T KOG1582|consen  145 PVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQTS--------------------PNFNLIGVMMISGA  198 (367)
T ss_pred             hhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhcccccC--------------------CCcceeeHHHHHHH
Confidence            778889999999999999      9999999999999998665322                    22246899998888


Q ss_pred             HHHHHhHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc---cchhhHHHHHHHHHhhhHHHHHHH
Q 044658          192 TVVWSSWFLIQARIGKKYP-CKYSSTAIMALFGAIQSAVLSLIVERNPAGWAM---KGKLEIITIIYSGVVGSGLCYVGM  267 (364)
Q Consensus       192 ~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~  267 (364)
                      -++-|.-.-.+++..+..+ +...+.++...++.+.+.......+.-...|+.   .+.......++.+ +.+.++....
T Consensus       199 Ll~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s-~~gylG~~~V  277 (367)
T KOG1582|consen  199 LLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS-LAGYLGIVFV  277 (367)
T ss_pred             HHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH-HHhHhhHHHH
Confidence            8898888777888877655 345677778888887777666665543333321   1112333344444 3566777777


Q ss_pred             HHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCccc
Q 044658          268 AWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKE  327 (364)
Q Consensus       268 ~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~~  327 (364)
                      ..-++..++..+..+....-.+++++++++|..+++..-.-|..+++.|+++-.+.++.+
T Consensus       278 LalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk  337 (367)
T KOG1582|consen  278 LALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK  337 (367)
T ss_pred             HHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence            778888999999999999999999999999999999999999999999999988877443

>TIGR00803 nst UDP-galactose transporter

Probab=98.94  E-value=3.9e-09  Score=92.64  Aligned_cols=211  Identities=13%  Similarity=0.049  Sum_probs=128.1

Q ss_pred             ceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCcccc--cccccccccccccC-CCC
Q 044658          100 AFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYL--GATNHMTNDVNTMN-SSK  176 (364)
Q Consensus       100 ~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~--~~~~~~~~~~~~~~-~~~  176 (364)
                      .......+..++++++..+.+.++|.+..+      +++.++...|+....+.+.+....  ........+.++.. ...
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~   78 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL   78 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence            344556778888888888888888888888      888888888887654432211000  00000000000000 001


Q ss_pred             CCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhH-HHHHHHHHHHHHHHHHHHhhcCC-Cccc--ccchhhHHHH
Q 044658          177 KADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSS-TAIMALFGAIQSAVLSLIVERNP-AGWA--MKGKLEIITI  252 (364)
Q Consensus       177 ~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l  252 (364)
                      ...+...|....+.+..+-+...+..++..++.+..... .....+.+.+.........+.+. ..+.  ...+...+. 
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  157 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWI-  157 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHH-
Confidence            123557788888888888888888888877664321111 11112222221111111111110 0111  011111111 


Q ss_pred             HHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhh
Q 044658          253 IYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYIL  320 (364)
Q Consensus       253 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~  320 (364)
                         -++...++..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus       158 ---~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       158 ---VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             ---HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence               22345667778999999999999999999999999999999999999999999999999997754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.87  E-value=6.7e-08  Score=76.54  Aligned_cols=122  Identities=14%  Similarity=0.112  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHH
Q 044658          184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLC  263 (364)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (364)
                      |.++.+++.++-+...++.|+-.++.++ ...... .    +... .. .          .+   ....++.|+++.+++
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~~~-~~-~----------~~---p~~~i~lgl~~~~la   61 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IAAL-LA-F----------GL---ALRAVLLGLAGYALS   61 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HHHH-HH-H----------hc---cHHHHHHHHHHHHHH
Confidence            6788899999999999999988877542 221111 0    0000 00 0          00   022567788899999


Q ss_pred             HHHHHHHHhccCcceehcchhhhHHHHHHHHHH--HhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          264 YVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFF--ILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       264 ~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~--~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      +.+|.+++++.+.+.+.++..+.++...+.++.  ++||++++.+++|+++|++|+++..+.+++
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            999999999999999999999998888888885  799999999999999999999998865443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.86  E-value=4.3e-08  Score=90.06  Aligned_cols=139  Identities=16%  Similarity=0.182  Sum_probs=108.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCCHHHHHHHHHHH
Q 044658            7 WKPIIMMVAVNLGLAAANALLKKILDGGLN--HLVIVAYRQIIATIFLAPVAYFWERK-----SRPKLTVPILCQLFFSA   79 (364)
Q Consensus         7 ~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~--p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~g   79 (364)
                      ..|.++.++++++|+...++.|...+++-+  .....++-+..+.+.+..........     .....+.+.|..++..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            469999999999999999999987653222  23334444444443333332222211     11235677888888899


Q ss_pred             HHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           80 LTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      ++...+++.++++++++.+++.++.+..+.|++..++++++++|+++..+      ++|..+.++|+.+...
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence            88888999999999999999999999999999999999999999999999      9999999999998764

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.84  E-value=1.9e-08  Score=78.33  Aligned_cols=107  Identities=20%  Similarity=0.415  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHH
Q 044658          218 IMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFI  297 (364)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~  297 (364)
                      +++.++.+.........++..+.+.....+.+...+..|.++...++.++.+++++.+ ..++.+..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            4555555555555554332111122222244555666677666689999999999999 588899999999999999999


Q ss_pred             hcCCccchhhHHHHHHHHhhhhheecCc
Q 044658          298 LHERIYPGSVVGSIIVVIGLYILLWGKS  325 (364)
Q Consensus       298 l~e~~~~~~~~G~~li~~g~~l~~~~~~  325 (364)
                      ++|+++..+++|++++.+|+.+..+.+.
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999987543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.79  E-value=5.6e-08  Score=85.44  Aligned_cols=143  Identities=13%  Similarity=0.126  Sum_probs=117.3

Q ss_pred             chHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccchhhHHHHHHHHHhh
Q 044658          181 WAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWA-MKGKLEIITIIYSGVVG  259 (364)
Q Consensus       181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~  259 (364)
                      ...|+++++.|-+.|+..-.+.|.+...  ++.++..++.+++............+...-+. ..+++.+......+.+ 
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence            4679999999999999999988877554  46889999999999888777666544222222 2344566666666664 


Q ss_pred             hHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          260 SGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       260 ~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      ....+..|.++.++....++|.-++++|++.+++|.++++|+++..|++..++..+|+....+...+
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~  148 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS  148 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999999999999999999999999999999888765554

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.78  E-value=3.5e-08  Score=90.86  Aligned_cols=140  Identities=17%  Similarity=0.219  Sum_probs=107.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC---------CH-HHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILDG-GLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKL---------TV-PILCQ   74 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~~-~~~~~   74 (364)
                      ...|.++.++++++|+...+..|...++ +.+|..++++....+.+.++|+............         .. ..+..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            3569999999999999999999998762 3899999999999999999888754321110000         00 11111


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           75 LFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      .+..+.......+.+++.+++++++..+++...+.|+++.++++++++|+++..+      ++|..+++.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence            2233332223344677789999999999999999999999999999999999999      9999999999999864

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.73  E-value=2.5e-07  Score=76.15  Aligned_cols=134  Identities=25%  Similarity=0.317  Sum_probs=114.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC----C-------CHHH
Q 044658            9 PIIMMVAVNLGLAAANALLKKILDG------GLNHLVIVAYRQIIATIFLAPVAYFWERKSRPK----L-------TVPI   71 (364)
Q Consensus         9 ~~l~~~l~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~   71 (364)
                      |.++.+.+.++.+...+..|...++      ..++..+..+....+.+++.+.....+..+..+    .       ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5678999999999999999998876      578999999999999999999877655433111    0       2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhh
Q 044658           72 LCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTL  149 (364)
Q Consensus        72 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li  149 (364)
                      +..++..|++. ...+...+..++++++-..++......+.+.++++++++|+++..+      ++|+.+++.|+++-
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhee
Confidence            55666777776 8999999999999999999999999999999999999999999999      99999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.67  E-value=2.2e-08  Score=88.95  Aligned_cols=278  Identities=13%  Similarity=0.167  Sum_probs=168.1

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVT   84 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (364)
                      +...|.++.+.+.++.|.+.++-|+...+ ...   ..               .+......+. .++  +.++.|++.+.
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra~~gg~~y-l~~--~~Ww~G~ltm~   75 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRAGEGGYGY-LKE--PLWWAGMLTMI   75 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccccCCCcch-hhh--HHHHHHHHHHH
Confidence            45678888899999999999999988764 100   00               0111111111 122  45678999899


Q ss_pred             HHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCCccccccccc
Q 044658           85 LAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNH  164 (364)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~  164 (364)
                      ++...-|.|+.+.|++.++++..+..+..++++..+++||++...      .+|+.++++|-.++......+... .   
T Consensus        76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~haP~e~~i-~---  145 (335)
T KOG2922|consen   76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIHAPKEQEI-E---  145 (335)
T ss_pred             HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEecCccccc-c---
Confidence            999999999999999999999999999999999999999999999      999999999999998633222111 0   


Q ss_pred             ccccccccCCCCCCCCchHHHHHHHHHH-HHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHH-------HHHHHhhc
Q 044658          165 MTNDVNTMNSSKKADDWAIGSIVLIAFT-VVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSA-------VLSLIVER  236 (364)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~-~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  236 (364)
                       +.   .+..   ..-...+.+.-..-- +...+-....|+. ....+.+.+.....+.+++-..       .+-.....
T Consensus       146 -t~---~el~---~~~~~~~Fliy~~~iil~~~il~~~~~p~-~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g  217 (335)
T KOG2922|consen  146 -SV---EEVW---ELATEPGFLVYVIIIILIVLILIFFYAPR-YGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSG  217 (335)
T ss_pred             -cH---HHHH---HHhcCccHHHHHHHHHHHHHHHheeeccc-ccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcC
Confidence             00   0000   000011211111111 1111111111211 1111344444444444432111       11111111


Q ss_pred             CCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhh-HHHHHHHHHHHhcCCccc------hhhHH
Q 044658          237 NPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLI-QIFVAIVGFFILHERIYP------GSVVG  309 (364)
Q Consensus       237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~-pv~~~~~~~~~l~e~~~~------~~~~G  309 (364)
                      .. +.  ..+..|..++.+. .+........++|++..+++.++++.+.. ..++++-+.++++|.-..      ..+.|
T Consensus       218 ~~-ql--~~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~G  293 (335)
T KOG2922|consen  218 NN-QL--FYPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCG  293 (335)
T ss_pred             Cc-cc--ccHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh
Confidence            11 11  1223454444444 35667778889999999999998887764 456667778888886432      46788


Q ss_pred             HHHHHHhhhhheecCcc
Q 044658          310 SIIVVIGLYILLWGKSK  326 (364)
Q Consensus       310 ~~li~~g~~l~~~~~~~  326 (364)
                      ...++.|+++....|.+
T Consensus       294 f~ti~~G~flL~~~kd~  310 (335)
T KOG2922|consen  294 FVTIFLGIFLLHRTKDM  310 (335)
T ss_pred             HHHhhheeeEeeeeccc
Confidence            99999999988654443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.65  E-value=8.8e-07  Score=83.11  Aligned_cols=138  Identities=11%  Similarity=0.097  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHH
Q 044658          183 IGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGL  262 (364)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  262 (364)
                      .-..+.+.--.+...+.+..|...+..+-|..++.++++++.+................. .....|..++..|++. ..
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~-~~  126 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCH-LF  126 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHH-HH
Confidence            333444444444556677888888887558999999999998765544322111111111 1224566777778754 44


Q ss_pred             HHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          263 CYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       263 ~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                      .+...+.++++.+++.++++..++|++++++++++++|++++.+++|.+++++|+.+...
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            566678999999999999999999999999999999999999999999999999998864

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.59  E-value=4.9e-07  Score=69.89  Aligned_cols=67  Identities=18%  Similarity=0.221  Sum_probs=61.7

Q ss_pred             HHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          255 SGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       255 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      .++++.+.++.++..++++.+.+.+-.+.++.++++.+.+++++||++++.+++|..++++|+.+..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3445677899999999999999999999999999999999999999999999999999999998764

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.59  E-value=4.7e-07  Score=82.70  Aligned_cols=129  Identities=19%  Similarity=0.226  Sum_probs=104.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH----HHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 044658            7 WKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQI----IATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTG   82 (364)
Q Consensus         7 ~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   82 (364)
                      .+|+++.+++++.++......|..   +.+|...++....    .+.+++.++   +  +.++ ...+.....+..|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKP-LKKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccc-hHHHHHHHHHHHHHHH
Confidence            789999999999999999999976   3888888555554    333333322   1  1122 2344455556689885


Q ss_pred             HHHHHHHHHHhcc-ccCcceeehcccchhHHHHHHhhhhccccccccccccccch----hHHHHHHhhhhhhee
Q 044658           83 VTLAQYFFLLGFE-YTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKV----LGAIVCIGGALTLTL  151 (364)
Q Consensus        83 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~----~gi~~~~~Gv~li~~  151 (364)
                       .+++.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++      +    +|..+.+.|+.++..
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILGI  288 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHhc
Confidence             999999999999 9999999999999999999999999999999999      9    999999999998753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.51  E-value=1.8e-06  Score=78.60  Aligned_cols=134  Identities=19%  Similarity=0.228  Sum_probs=107.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 044658            7 WKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVA-YRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTL   85 (364)
Q Consensus         7 ~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (364)
                      ..|.++.++++++|+...+..|... + .++..... +.......+..+..  ..... .+...+.+......|++....
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFF--LSGFG-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999876 3 66666666 34332222222222  11111 345678888888999998567


Q ss_pred             HHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           86 AQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      ++.++++++++.+++.++++..+.|++..++++++++|+++..+      ++|+.+.+.|+.+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~~  287 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999      9999999999999864

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.46  E-value=4.2e-07  Score=70.25  Aligned_cols=67  Identities=22%  Similarity=0.276  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhe
Q 044658           78 SALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLT  150 (364)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~  150 (364)
                      .++++..+++.++..+++..|.+.+..+.++.++++.+++++++|||++.++      ++|+.++++|+.++.
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            3445568899999999999999999999889999999999999999999999      999999999999885

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.39  E-value=3.1e-06  Score=67.09  Aligned_cols=119  Identities=18%  Similarity=0.164  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 044658            8 KPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQ   87 (364)
Q Consensus         8 ~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   87 (364)
                      .++++++++.++-+...++.|...++ .+........  .      ...  ....       ..+ ..+..|+....+++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~~--~------~~~--~~~~-------~p~-~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWDF--I------AAL--LAFG-------LAL-RAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhHH--H------HHH--HHHh-------ccH-HHHHHHHHHHHHHH
Confidence            47888999999999999999999874 4433321110  0      000  0000       001 13566777779999


Q ss_pred             HHHHHhccccCcceeehcccchhHHHHHHhhh--hccccccccccccccchhHHHHHHhhhhhhee
Q 044658           88 YFFLLGFEYTTAAFSCAFINIVPVSTFLLALP--FRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        88 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~--~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      .++.++++..+++.+..+.+..+.++.+.++.  +++|+++..+      ++|+.++++|++++..
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhcc
Confidence            99999999999999999999998888888885  7999999999      9999999999999974

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.30  E-value=5.3e-06  Score=71.40  Aligned_cols=137  Identities=15%  Similarity=0.082  Sum_probs=116.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTL   85 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   85 (364)
                      +..|..+.+.+..+|+.+-+..|..-+. .+.-.-+.+-+.++.++.+|+.......  .-.++......+..++++..+
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~--~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP--ALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch--hhcChHHHHHHHHHHHHhccc
Confidence            5678999999999999999999988753 6666777888899999999987632222  224566677778889999899


Q ss_pred             HHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           86 AQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        86 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      .+.+...+++..|....+.+.++.|.+.++.++++++|+++..|      |.++...+.+..-.++
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~l  282 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGSTL  282 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999      9999999888876554

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.30  E-value=2.6e-05  Score=71.92  Aligned_cols=143  Identities=14%  Similarity=0.085  Sum_probs=113.6

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC--CCHHHHHHHHHHHHH
Q 044658            4 CRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPK--LTVPILCQLFFSALT   81 (364)
Q Consensus         4 ~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~   81 (364)
                      .+..+|-++++.+++++|.++++-+....+ .++.++...--+.+.++..+.....++++..+  .+.+....++..+++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence            456889999999999999999999999884 88888888777888888777766555554433  344444443333433


Q ss_pred             HHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccC
Q 044658           82 GVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKG  154 (364)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~  154 (364)
                       .+..+.+.-..+++.++....+-.-+..++..+++.+++++++++..      ++|..+.++|+++....+.
T Consensus       243 -lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  243 -LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             -HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccCC
Confidence             36666677788899999888887788899999999999999999999      9999999999999986443

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.09  E-value=5.1e-05  Score=59.03  Aligned_cols=70  Identities=16%  Similarity=0.286  Sum_probs=59.5

Q ss_pred             HHhhhHHHHHHHHHHHhccCcceehcc-hhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCc
Q 044658          256 GVVGSGLCYVGMAWCVEQRGPVFTSAF-TPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKS  325 (364)
Q Consensus       256 ~~~~~~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~  325 (364)
                      .+++.+++++++.+++|+.+.+.+=.+ ..+..+.+.+.+++++||++++.+++|+.+|++|++......+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            344567899999999999998776555 4688899999999999999999999999999999998865443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.95  E-value=0.00018  Score=66.20  Aligned_cols=127  Identities=18%  Similarity=0.116  Sum_probs=96.0

Q ss_pred             HHhHHHHHHHHhccCC-C--chhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHHH
Q 044658          195 WSSWFLIQARIGKKYP-C--KYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWCV  271 (364)
Q Consensus       195 ~a~~~i~~k~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~  271 (364)
                      +..+.+.++++.++.. .  +..+++.++....+...+.......     .......+...+..++ ....+..+-+.++
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~al   85 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-----PKSRKIPLKKYAILSF-LFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-----cCCCcChHHHHHHHHH-HHHHHHHHHHHHH
Confidence            3445566777766532 3  6788888888888777766555431     1111223334444554 4677888899999


Q ss_pred             hccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCccc
Q 044658          272 EQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKE  327 (364)
Q Consensus       272 ~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~~  327 (364)
                      ++++.....+.....|+..++++.+++|++.+..++++.+++.+|+.+....+.++
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~  141 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS  141 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence            99999999999999999999999999999999999999999999999998765544

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.93  E-value=0.00016  Score=55.49  Aligned_cols=68  Identities=7%  Similarity=0.168  Sum_probs=58.1

Q ss_pred             HhhhHHHHHHHHHHHhccCcceehcc-hhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658          257 VVGSGLCYVGMAWCVEQRGPVFTSAF-TPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       257 ~~~~~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      +++..+++.++..++++.+.+.+=.+ .-+..+.+.+.++++++|++++.+++|+.++++|+++.+...
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34567899999999999998766444 557888999999999999999999999999999999986543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.92  E-value=0.0019  Score=58.76  Aligned_cols=301  Identities=14%  Similarity=0.111  Sum_probs=175.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHH-hhhcCC----CCCCHHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYF-WERKSR----PKLTVPILCQLFFSA   79 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~~~----~~~~~~~~~~~~~~g   79 (364)
                      .-..|+++..++.++-|+..+..|+..+  .+-...=.+..+++.++ .|+... ..-+..    ...+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            4467899999999999999999998754  44333333334444443 343322 111111    123446677778889


Q ss_pred             HHHHHHHHHHHHHhccccCccee-ehcccchhHHHHHHhhhhcccccc-ccccccccchhHHHHHHhhhhhheeccCCcc
Q 044658           80 LTGVTLAQYFFLLGFEYTTAAFS-CAFINIVPVSTFLLALPFRLEKLN-MKSLDGRSKVLGAIVCIGGALTLTLYKGKPF  157 (364)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~ll~~~~l~e~~~-~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~  157 (364)
                      ++- .++...|-.+++|+..+.. ++...+.-++..++-.++.++--. ..+.-++.-++|++++++|+.+.........
T Consensus        81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            885 8999999999999999877 444556666666665555332100 0011123348999999999999974321111


Q ss_pred             cccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhc------cCC-Cch----hHHHHHHHHHHHH
Q 044658          158 YLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGK------KYP-CKY----SSTAIMALFGAIQ  226 (364)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~------~~~-~~~----~~~~~~~~~~~~~  226 (364)
                      +            ...++.++.+..+|.+.++++++..|.+++-...-..      ... +|.    ......+.-+.+.
T Consensus       160 ~------------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~t  227 (344)
T PF06379_consen  160 K------------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFIT  227 (344)
T ss_pred             h------------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHH
Confidence            1            0112234567789999999999999999886543211      000 111    1222334444455


Q ss_pred             HHHHHHHhhc---CCC---cccccchh---hHHHHHHHHHhhhHHHHHHHHHHHhccCc----ceehcchhhhHHHHHHH
Q 044658          227 SAVLSLIVER---NPA---GWAMKGKL---EIITIIYSGVVGSGLCYVGMAWCVEQRGP----VFTSAFTPLIQIFVAIV  293 (364)
Q Consensus       227 ~~~~~~~~~~---~~~---~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~a~~~~~~----~~~s~~~~l~pv~~~~~  293 (364)
                      -..+++....   +..   ++....+.   ....-+..|. .=..++++|..+-.+.+.    +--.+.+.+..+++-++
T Consensus       228 N~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvw  306 (344)
T PF06379_consen  228 NLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVW  306 (344)
T ss_pred             HHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHH
Confidence            5555554322   211   11111111   1111122222 234466777777777663    34456788888999999


Q ss_pred             HHHHhcCCc------cchhhHHHHHHHHhhhhheec
Q 044658          294 GFFILHERI------YPGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       294 ~~~~l~e~~------~~~~~~G~~li~~g~~l~~~~  323 (364)
                      +. .++|.-      -..-++|+++++.++.+..+.
T Consensus       307 Gl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  307 GL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            97 677742      234588988888888776553

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.82  E-value=6.4e-06  Score=71.42  Aligned_cols=136  Identities=13%  Similarity=0.154  Sum_probs=100.2

Q ss_pred             CchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhh
Q 044658          180 DWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVG  259 (364)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  259 (364)
                      ....|.++.-++ .++...++..++....  +|......++++-.+...|..+......  +.......|  ++.=|+. 
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~--LiLRg~m-  106 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKW--LILRGFM-  106 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEE--EEeehhh-
Confidence            346788888888 7777788878777655  4666777776666655555444332221  111112223  2333443 


Q ss_pred             hHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheec
Q 044658          260 SGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       260 ~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~  323 (364)
                      ...+..+.+++.++.+-+.+.++....|+++.+++|.+++|+.+..+.+|..+.+.|++++.+.
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence            3467788899999999999999999999999999999999999999999999999999998753

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.81  E-value=0.00044  Score=55.57  Aligned_cols=132  Identities=13%  Similarity=0.124  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHH
Q 044658          184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLC  263 (364)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (364)
                      ..+++++++.+-++...++.++.++..+|.....+.+..+.+.+.......+..  .........|+...  |.+.....
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l--GG~lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL--GGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc--cHHHHHHH
Confidence            357889999999999999999999877789999999999999988888777653  22222223344322  33445667


Q ss_pred             HHHHHHHHhccCcceehcch-hhhHHHHHHHHHH----HhcCCccchhhHHHHHHHHhhhh
Q 044658          264 YVGMAWCVEQRGPVFTSAFT-PLIQIFVAIVGFF----ILHERIYPGSVVGSIIVVIGLYI  319 (364)
Q Consensus       264 ~~~~~~a~~~~~~~~~s~~~-~l~pv~~~~~~~~----~l~e~~~~~~~~G~~li~~g~~l  319 (364)
                      ..+....+++.+++.+..+. .-|.+.+++++.+    .-++++++.+++|.+++++|+.+
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            77788889999987766654 4456667777775    24577899999999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.79  E-value=0.00012  Score=66.85  Aligned_cols=120  Identities=15%  Similarity=0.229  Sum_probs=88.3

Q ss_pred             CCchHHHHHHHHHHHHHHhHHHHHHHHhccCCC-chhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHH
Q 044658          179 DDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPC-KYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGV  257 (364)
Q Consensus       179 ~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  257 (364)
                      .+...|..+++.++++.+....++|+...+.+. ....                     .....+......|+.    |.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~---------------------~~~~~~~l~~~~W~~----G~   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA---------------------GSGGRSYLRRPLWWI----GL   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---------------------cchhhHHHhhHHHHH----HH
Confidence            346889999999999999999999987655321 0100                     000000001122332    33


Q ss_pred             hhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheec
Q 044658          258 VGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       258 ~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~  323 (364)
                      +...++..+...+....+++.++++..+..++..+++..++||+++...++|+.+++.|..+....
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            334556677778899999999999999999999999999999999999999999999999877543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.70  E-value=0.00049  Score=61.15  Aligned_cols=118  Identities=13%  Similarity=0.101  Sum_probs=89.2

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 044658            4 CRQWKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGV   83 (364)
Q Consensus         4 ~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   83 (364)
                      ++..++++.++++.+.+..+.++.|..   +.+|....+-. .++.++-..++....+   .+...|...+-++.|++- 
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~---~~~~~k~~~~nil~G~~w-  205 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSK---KPFFEKKSWKNILTGLIW-  205 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhccc---ccccccchHHhhHHHHHH-
Confidence            345789999999999999999998875   57887766644 4444433333322111   122234445557788886 


Q ss_pred             HHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccc
Q 044658           84 TLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKS  129 (364)
Q Consensus        84 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~  129 (364)
                      ..++.+++.+.+....+.+-.+.++.+++..+.+.+++||+=++++
T Consensus       206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke  251 (269)
T PF06800_consen  206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE  251 (269)
T ss_pred             HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence            9999999999999999999999999999999999999999988776

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.61  E-value=0.0013  Score=52.88  Aligned_cols=139  Identities=13%  Similarity=0.129  Sum_probs=94.6

Q ss_pred             hHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhH
Q 044658          182 AIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSG  261 (364)
Q Consensus       182 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  261 (364)
                      ....+.++.++.+-.+..-.+.++.+..++|.......+.++.+.+..+.+..++. ..+....+..|+.. .-|.+ ..
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~-~GG~l-Ga   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAW-IGGLL-GA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHH-Hccch-hh
Confidence            56788999999999999999999999887899999999999999888888775442 22222222334432 22222 22


Q ss_pred             HHHHHHHHHHhccCc-ceehcchhhhHHHHHHHHHHHhc----CCccchhhHHHHHHHHhhhhheec
Q 044658          262 LCYVGMAWCVEQRGP-VFTSAFTPLIQIFVAIVGFFILH----ERIYPGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       262 ~~~~~~~~a~~~~~~-~~~s~~~~l~pv~~~~~~~~~l~----e~~~~~~~~G~~li~~g~~l~~~~  323 (364)
                      +-.+.-.....+.++ ..+.....-+.+.+++.+.+=+.    .++++.+++|++++++|+++..+.
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            222333444555554 44555566677777777765332    568899999999999996666544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.60  E-value=0.00023  Score=54.55  Aligned_cols=110  Identities=15%  Similarity=0.164  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044658           14 VAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLG   93 (364)
Q Consensus        14 ~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   93 (364)
                      ++..++||.++++.|.... +.++..-.. |..-....     +           .+.|.+. +.-+++ -.+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~-ipf~lN-q~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF-----L-----------LLNPKYI-IPFLLN-QSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH-----H-----------HHhHHHH-HHHHHH-HHHHHHHHHH
Confidence            3567899999999999987 354333221 32111111     0           1112222 222333 6778889999


Q ss_pred             ccccCcceeehcc-cchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhh
Q 044658           94 FEYTTAAFSCAFI-NIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTL  149 (364)
Q Consensus        94 l~~~~~~~~~~l~-~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li  149 (364)
                      +...+.+.+.++. ++.=++|++.++++.+|..+++.      ++|+.+.+.|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence            9999999999995 68999999999999888889999      99999999999764

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.57  E-value=0.0015  Score=49.97  Aligned_cols=64  Identities=8%  Similarity=0.194  Sum_probs=54.9

Q ss_pred             hhhHHHHHHHHHHHhccCccee-hcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhe
Q 044658          258 VGSGLCYVGMAWCVEQRGPVFT-SAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILL  321 (364)
Q Consensus       258 ~~~~~~~~~~~~a~~~~~~~~~-s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~  321 (364)
                      ++..+++++...++|+++.+.+ ++-.-+..+.+.+.+++++||++++.+++|+.+++.|+...+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3467899999999999987654 455567788899999999999999999999999999998864

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.56  E-value=0.00054  Score=52.37  Aligned_cols=62  Identities=15%  Similarity=0.106  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhe
Q 044658           83 VTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLT  150 (364)
Q Consensus        83 ~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~  150 (364)
                      ..+++++...+++++|.+.+-.+ .....+.+.+.++++++|+++..+      ++|+.+.+.|+..+-
T Consensus        45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~lk  107 (109)
T PRK10650         45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence            47899999999999999998544 558889999999999999999999      999999999999873

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.53  E-value=0.0012  Score=50.23  Aligned_cols=66  Identities=20%  Similarity=0.268  Sum_probs=56.6

Q ss_pred             HhhhHHHHHHHHHHHhccCccee-hcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          257 VVGSGLCYVGMAWCVEQRGPVFT-SAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       257 ~~~~~~~~~~~~~a~~~~~~~~~-s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                      +++...++++...++|+.+.+.+ ++-.-+..+.+.+.+++++||++++.+++|+.++++|+...+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            34567899999999999987554 5556688899999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.53  E-value=0.00037  Score=52.44  Aligned_cols=66  Identities=18%  Similarity=0.269  Sum_probs=57.0

Q ss_pred             hhHHHHHHHHHHHhccCcce-ehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658          259 GSGLCYVGMAWCVEQRGPVF-TSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       259 ~~~~~~~~~~~a~~~~~~~~-~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      +..++|.+...++|+++.+. .++-.-+-.+.+.+.++++++|+.++.+++|..++++|+...+...
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            45689999999999998654 4666778888999999999999999999999999999999887643

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.51  E-value=0.0005  Score=62.79  Aligned_cols=139  Identities=21%  Similarity=0.208  Sum_probs=113.2

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHHH-HHHHHhhhcCC----C-CCCHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILD---GGLNHLVIVAYRQIIATIFLA-PVAYFWERKSR----P-KLTVPILCQL   75 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~---~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~----~-~~~~~~~~~~   75 (364)
                      -...|....+.+.+..+.-.++.|..+.   ++.+++....+..-++.+.++ |+....+....    . ..+...+..+
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL  239 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH
Confidence            3578999999999999999999999993   358899999998888888888 87765444332    1 2333433333


Q ss_pred             HHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           76 FFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        76 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      + .+++. .+.+...|..+..+++-.-++...+--+++...+++++++++++.+      ..|..++++|+.+-..
T Consensus       240 ~-~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  240 L-NSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYSR  307 (316)
T ss_pred             H-HHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHHH
Confidence            3 34776 7888899999999999999999988888888999999999999999      9999999999998863

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.41  E-value=0.0015  Score=59.69  Aligned_cols=143  Identities=11%  Similarity=0.163  Sum_probs=112.0

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHHHhhhcCC---CCCCHHHHHHHHH
Q 044658            4 CRQWKPIIMMVAVNLGLAAANALLKKILDGG---LNHLVIVAYRQIIATIFLAPVAYFWERKSR---PKLTVPILCQLFF   77 (364)
Q Consensus         4 ~~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~   77 (364)
                      .+...|-++.+++++++|...++.|.-.+++   .+--.+-.+--++..++++|..+....-..   .-.+..+...++.
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~  322 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVF  322 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeH
Confidence            3557899999999999999999999988743   443333444446667777765544333222   2223455556677


Q ss_pred             HHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheec
Q 044658           78 SALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLY  152 (364)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~  152 (364)
                      .++++.+++.++|..|.-.+++-.+++-..++....++.-.++.+.++++..      ++|.+..++|.+++...
T Consensus       323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence            8888889999999999999999999999888877889999999999999999      99999999999999753

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.37  E-value=0.00029  Score=54.86  Aligned_cols=67  Identities=15%  Similarity=0.198  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           79 ALTGVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      .+....++++++..++++.|.+.+..+ ....-+.+.++++++++|+++..+      ++|+.++++|+..+-.
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            333458899999999999999999666 468999999999999999999999      9999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.36  E-value=0.0014  Score=48.81  Aligned_cols=56  Identities=23%  Similarity=0.319  Sum_probs=34.7

Q ss_pred             hhhHHHHHHHHHHHhccCcceehc-chhhhHHHHHHHHHHHhcCCccchhhHHHHHH
Q 044658          258 VGSGLCYVGMAWCVEQRGPVFTSA-FTPLIQIFVAIVGFFILHERIYPGSVVGSIIV  313 (364)
Q Consensus       258 ~~~~~~~~~~~~a~~~~~~~~~s~-~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li  313 (364)
                      .+...+++++.+++|+.+.+.+=. ...+..+...+.+.+++||++|+.+++|+.+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            356789999999999999888844 45689999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.36  E-value=0.0024  Score=51.30  Aligned_cols=130  Identities=16%  Similarity=0.158  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 044658           10 IIMMVAVNLGLAAANALLKKILDGGLN-HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQY   88 (364)
Q Consensus        10 ~l~~~l~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (364)
                      +++.+++..+-+....+.....++ .+ |..-+++.+..+.+++..+....+++.....+..+|. .+.-|+++ ...-.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHH-HHHHH
Confidence            456677777788887777777764 55 9999999999999999888776655433323223333 34478887 88888


Q ss_pred             HHHHhccccCcceeehccc-chhHHHHHHhhh----hccccccccccccccchhHHHHHHhhhhh
Q 044658           89 FFLLGFEYTTAAFSCAFIN-IVPVSTFLLALP----FRLEKLNMKSLDGRSKVLGAIVCIGGALT  148 (364)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~----~l~e~~~~~~~~~~~~~~gi~~~~~Gv~l  148 (364)
                      +..+....++++.+..+.- -+-+...++..+    .-+++++..+      ++|+.+.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence            8999999999988766654 455555666664    4678899999      9999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.35  E-value=0.00034  Score=52.65  Aligned_cols=65  Identities=23%  Similarity=0.351  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHhccccCccee-ehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           81 TGVTLAQYFFLLGFEYTTAAFS-CAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      .+..+++.++..++++.|.+.+ ++....-.+.+.+.++++++|+++..+      ++|+.+.++|+..+-.
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhhh
Confidence            3357899999999999999998 555669999999999999999999999      9999999999998853

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.33  E-value=0.00048  Score=52.90  Aligned_cols=66  Identities=17%  Similarity=0.313  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           80 LTGVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      +.+..+++.++..++++.|.+.+..+ ....-+.+.++++++++|+++..+      ++|+.+.++|+..+..
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            34457888999999999999999666 558889999999999999999999      9999999999999964

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.28  E-value=0.00053  Score=52.11  Aligned_cols=64  Identities=13%  Similarity=0.155  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhe
Q 044658           81 TGVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLT  150 (364)
Q Consensus        81 ~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~  150 (364)
                      .+...++++...+++..|.+.+-.+ .....+.+.++++++++|++++.+      ++|+.+.+.|+..+.
T Consensus        37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~  101 (105)
T PRK11431         37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence            3348899999999999999998544 559999999999999999999999      999999999999885

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.24  E-value=0.0012  Score=58.60  Aligned_cols=80  Identities=10%  Similarity=0.172  Sum_probs=69.3

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          247 LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       247 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      +..+.+..-+++ ..+.+.+.+.++++.+|+...++..+..+++.++++++++++++..||++..+.++|+.+.......
T Consensus        15 ~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   15 KDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            344555555653 6788899999999999999999999999999999999999999999999999999999998876554


Q ss_pred             c
Q 044658          327 E  327 (364)
Q Consensus       327 ~  327 (364)
                      .
T Consensus        94 ~   94 (244)
T PF04142_consen   94 S   94 (244)
T ss_pred             c
Confidence            4

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.77  E-value=0.005  Score=54.52  Aligned_cols=132  Identities=14%  Similarity=0.038  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHH
Q 044658          184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLC  263 (364)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (364)
                      |.+.+++|+++++...+=.|+....  |++...+++.....+......+..+.  ..+        .....+|...-..+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~--p~f--------~p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGF--PPF--------YPWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCC--Ccc--------eeHHHhhhhhhhcC
Confidence            5678899999999999988877644  56655555555554444444443321  111        11222232234456


Q ss_pred             HHHHHHHHhccCcceehcc-hhhhHHHHHHHHHH-HhcCCc-----cchhhHHHHHHHHhhhhheecCccc
Q 044658          264 YVGMAWCVEQRGPVFTSAF-TPLIQIFVAIVGFF-ILHERI-----YPGSVVGSIIVVIGLYILLWGKSKE  327 (364)
Q Consensus       264 ~~~~~~a~~~~~~~~~s~~-~~l~pv~~~~~~~~-~l~e~~-----~~~~~~G~~li~~g~~l~~~~~~~~  327 (364)
                      +.+-.-.+|.++-...-.+ ...+.+.+-..+.+ +||++.     .+..++|++++++|..++..-|.+.
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            6667777777775554333 33466666666654 455433     3568999999999999987766554

The region concerned is approximately 280 residues long.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.70  E-value=0.019  Score=44.10  Aligned_cols=109  Identities=15%  Similarity=0.140  Sum_probs=74.7

Q ss_pred             HHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHHH
Q 044658          190 AFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAW  269 (364)
Q Consensus       190 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  269 (364)
                      +-+++|+..+-+.||..+..++...- . +..--. ..    ++.          +++.+.     ..+....+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~-~~----Ll~----------n~~y~i-----pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEI-KF----LLL----------NPKYII-----PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHH-HH----HHH----------hHHHHH-----HHHHHHHHHHHHHH
Confidence            45789999999999988775522211 1 111111 11    110          111222     22335566778889


Q ss_pred             HHhccCcceehcc-hhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhh
Q 044658          270 CVEQRGPVFTSAF-TPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYIL  320 (364)
Q Consensus       270 a~~~~~~~~~s~~-~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~  320 (364)
                      .+.+.+-+.+.++ +.+.-+++++.++++.+|..++..++|++++++|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            9999999999998 49999999999987777777888999999999998753

Many members are annotated as potential transmembrane proteins.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.43  E-value=0.033  Score=49.40  Aligned_cols=184  Identities=10%  Similarity=-0.002  Sum_probs=114.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 044658            9 PIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQY   88 (364)
Q Consensus         9 ~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (364)
                      |++..+++.+++|+.++-.|..-.  .|++.+-++.+....+.-+.+....   ..+    +.+.+.++.|.+- +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~---~~p----~f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLIL---GFP----PFYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhc---CCC----cceeHHHhhhhhh-hcCce
Confidence            567889999999999999996643  5777777766655555444444332   222    2244556667775 88888


Q ss_pred             HHHHhccccCcceeehcccc-hhHHHHHHhhh-hccccc-----cccccccccchhHHHHHHhhhhhheeccCCccc---
Q 044658           89 FFLLGFEYTTAAFSCAFINI-VPVSTFLLALP-FRLEKL-----NMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFY---  158 (364)
Q Consensus        89 ~~~~al~~~~~~~~~~l~~~-~pi~~~ll~~~-~l~e~~-----~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~---  158 (364)
                      +-.-.++.+..+....+-++ .-+..-..+++ +++++.     ....      .+|+.++++|..+...-+.+...   
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln------~~G~~l~~~~~~~f~fik~~~~~~~~  144 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLN------YIGVALVLVSGIIFSFIKSEEKEPKK  144 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHH------HHHHHHHHHHHHheeeecCCCCCccc
Confidence            88999999999988888764 44444454544 343322     2334      77888888888877653322210   


Q ss_pred             ------cccc-cccccccc--ccCCCC-----CCCCchHHHHHHHHHHHHHHhHHHHHHHHhcc
Q 044658          159 ------LGAT-NHMTNDVN--TMNSSK-----KADDWAIGSIVLIAFTVVWSSWFLIQARIGKK  208 (364)
Q Consensus       159 ------~~~~-~~~~~~~~--~~~~~~-----~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~  208 (364)
                            ...+ ..+..+..  +.+.+.     ..+++..|..+++++++.|+...+=..+..++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  145 SSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             cccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence                  0000 01111110  111111     11257789999999999999988877776655

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.31  E-value=0.0051  Score=45.83  Aligned_cols=55  Identities=24%  Similarity=0.281  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHH
Q 044658           82 GVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVC  142 (364)
Q Consensus        82 ~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~  142 (364)
                      ...++..++..++++.|.+.+-.+ ..+..+.+.+.+.++++|++|..+      +.|+.+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HhheeeC
Confidence            348888999999999999999655 569999999999999999999999      9998753

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.23  E-value=0.17  Score=47.07  Aligned_cols=145  Identities=15%  Similarity=0.092  Sum_probs=92.0

Q ss_pred             CchHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCChHHHHHHHHH---HHHHHHHHH-HHHhh-h-cCC-----CC
Q 044658            5 RQWKPIIMMVAVNLGLAAAN-------ALLKKILDGGLNHLVIVAYRQI---IATIFLAPV-AYFWE-R-KSR-----PK   66 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~-------~~~k~~~~~~~~p~~~~~~r~~---~~~l~l~~~-~~~~~-~-~~~-----~~   66 (364)
                      +..||++.++++.+..+...       +..+.....+.++.....-.+.   ++.++.-.+ ..+.. + ++.     .+
T Consensus       171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~  250 (345)
T PRK13499        171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS  250 (345)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence            45889999999999999988       5665544445665554444443   444433322 22211 1 111     11


Q ss_pred             CC----HHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeeh---cc-cchhHHHHHHhhhhccccccccccccccchhH
Q 044658           67 LT----VPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCA---FI-NIVPVSTFLLALPFRLEKLNMKSLDGRSKVLG  138 (364)
Q Consensus        67 ~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~g  138 (364)
                      .+    .+......+.|++- .+.+.++..+-...+.+...+   +. ++..++..+-+. ++||+=+..+++-+-.++|
T Consensus       251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G  328 (345)
T PRK13499        251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG  328 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence            12    34444456777775 788888888888776665555   55 555566666676 5899988545455666889


Q ss_pred             HHHHHhhhhhhee
Q 044658          139 AIVCIGGALTLTL  151 (364)
Q Consensus       139 i~~~~~Gv~li~~  151 (364)
                      +++.++|..++..
T Consensus       329 ~vliI~g~~lig~  341 (345)
T PRK13499        329 CVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988864

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.87  E-value=0.38  Score=44.26  Aligned_cols=141  Identities=11%  Similarity=0.072  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhccCC---CchhHHHHHHHHHHHHHHHHHHHhhcC-----CCcc---cccchhhHHH
Q 044658          183 IGSIVLIAFTVVWSSWFLIQARIGKKYP---CKYSSTAIMALFGAIQSAVLSLIVERN-----PAGW---AMKGKLEIIT  251 (364)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~  251 (364)
                      .-.+..+...+-++......|+..+..+   .|.+..+..-+.-.++.....+..++.     ....   ....+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3444555555566666666666554432   244444444444444444444433211     0111   1111112223


Q ss_pred             HHHHHHhhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658          252 IIYSGVVGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       252 l~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      +..-+. ...+.+.+++.+..+.+|++..+...+..+.+.++..+++++++++.||...++.+.|+.+.+...
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            333333 356677799999999999999999999999999999999999999999999999999999998443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.85  E-value=0.0066  Score=52.52  Aligned_cols=134  Identities=18%  Similarity=0.238  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHH
Q 044658          184 GSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLC  263 (364)
Q Consensus       184 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  263 (364)
                      ..+.+++=++.|+..-....+...   .|.+.+.-+.+-+.+..+...++..+   ..   +...+..-+..|. .=.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p---~~---T~~~~iv~~isG~-~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSP---EL---TLTIFIVGFISGA-FWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecC---cc---chhhHHHHHHhhh-Hhhhh
Confidence            567889999999988776665543   35555555555444444444333211   11   1223333344444 34578


Q ss_pred             HHHHHHHHhccCcceehcchh-hhHHHHHHHHHHHhcCCccchhh----HHHHHHHHhhhhheecCccc
Q 044658          264 YVGMAWCVEQRGPVFTSAFTP-LIQIFVAIVGFFILHERIYPGSV----VGSIIVVIGLYILLWGKSKE  327 (364)
Q Consensus       264 ~~~~~~a~~~~~~~~~s~~~~-l~pv~~~~~~~~~l~e~~~~~~~----~G~~li~~g~~l~~~~~~~~  327 (364)
                      +...+++++..+.+++.++.. .+-+-+.+++++.+||..+..++    +..++++.|+++..++++.+
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n  141 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN  141 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc
Confidence            889999999999999998866 45566788999999999987643    34667778888887766543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.31  E-value=0.11  Score=46.50  Aligned_cols=139  Identities=13%  Similarity=0.156  Sum_probs=109.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-----CCHHHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDG-GLNHLVIVAYRQIIATIFLAPVAYFWERKSRPK-----LTVPILCQLFFS   78 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~   78 (364)
                      +...|+.+++...++-|..+..-+..+.. .+++..+.+.--+..++.-....+. ....++.     ..++.+.-++..
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~-qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLIL-QGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhc-CCCCchHHHHHHcChhHHHHHHHH
Confidence            56789999999999889888887777763 4778888888777777766655432 2222221     235666778888


Q ss_pred             HHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           79 ALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      ++++ +.++.+-++-++.-.+-..+.+..+--++..+++.+.++.+++..|      |.|+.+.+.|+.+=.+
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHH
Confidence            9998 9999999999988777777788888999999999999999999999      9999999999887654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=95.30  E-value=0.014  Score=48.69  Aligned_cols=66  Identities=14%  Similarity=0.201  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCccc
Q 044658          262 LCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSKE  327 (364)
Q Consensus       262 ~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~~  327 (364)
                      .+++.|..++++++++.++.+..-+..+..+++++.+|+++...+++..++.+.|+++..+.....
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            356789999999999999999999999999999999999999999999999999999888765543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.28  E-value=0.23  Score=40.09  Aligned_cols=137  Identities=14%  Similarity=0.089  Sum_probs=85.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 044658            7 WKPIIMMVAVNLGLAAANALLKKILDGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLA   86 (364)
Q Consensus         7 ~~~~l~~~l~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   86 (364)
                      ...+++.+++..+-.....+.-......-+|+.-.+..+..+++++..+.+...++......++.-.+.+.-|+++ ...
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence            4455666777777777777666666643459999999999999999888776333222221122223344556665 555


Q ss_pred             HHHHHHhccccCcceeehc-ccchhHHHHHHhhhh----ccccccccccccccchhHHHHHHhhhhhhe
Q 044658           87 QYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPF----RLEKLNMKSLDGRSKVLGAIVCIGGALTLT  150 (364)
Q Consensus        87 ~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~----l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~  150 (364)
                      -.........+.++....+ ..-+-+...++..+=    -+.+++..+      ++|+.+.++|+.++.
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r------~lgi~L~l~gil~~~  145 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPR------ILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHH------HHHHHHHHHHHHHhc
Confidence            5555555566665544333 334444555554432    247778888      999999999965553

>TIGR00803 nst UDP-galactose transporter

Probab=95.25  E-value=0.041  Score=48.07  Aligned_cols=64  Identities=13%  Similarity=0.043  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhh
Q 044658           78 SALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALT  148 (364)
Q Consensus        78 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~l  148 (364)
                      ..+++ +....+..+.++|.+....++...+.++++.+++.++++|+++..+      ++|+.+.+.|+.+
T Consensus       158 ~~~~~-a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l  221 (222)
T TIGR00803       158 VGLLN-VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL  221 (222)
T ss_pred             HHHHH-HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence            33443 6777788899999999999999999999999999999999999999      9999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=94.50  E-value=0.35  Score=36.11  Aligned_cols=112  Identities=17%  Similarity=0.191  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 044658           11 IMMVAVNLGLAAANALLKKILDGGLN------HLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVT   84 (364)
Q Consensus        11 l~~~l~~~~~~~~~~~~k~~~~~~~~------p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   84 (364)
                      .-++...++||..+++.|.... +++      .-...++|-.....                ..++.+..    -.++ -
T Consensus         6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~iP----FllN-q   63 (125)
T KOG4831|consen    6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTLF----------------LNWEYLIP----FLLN-Q   63 (125)
T ss_pred             HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHHH----------------HhHHHHHH----HHHH-H
Confidence            3467788999999999998876 333      22223333211100                11222222    2233 3


Q ss_pred             HHHHHHHHhccccCcceeehccc-chhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhe
Q 044658           85 LAQYFFLLGFEYTTAAFSCAFIN-IVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLT  150 (364)
Q Consensus        85 ~~~~~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~  150 (364)
                      -+..+||.-+++.+.+.+..+.+ +.-.++++.+..+-.|....+.      +.|..+.++|+.+..
T Consensus        64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLCI  124 (125)
T ss_pred             hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhee
Confidence            45667888899999999988866 7888899999887666666677      899999999987753

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.45  E-value=0.022  Score=51.33  Aligned_cols=123  Identities=16%  Similarity=0.209  Sum_probs=88.3

Q ss_pred             CCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHH
Q 044658          178 ADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGV  257 (364)
Q Consensus       178 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  257 (364)
                      ..++..|.++++.+.++.+...++.|+..++... .                 ..-.+.  ...+......||    .|.
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~-~-----------------~~ra~~--gg~~yl~~~~Ww----~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA-S-----------------GLRAGE--GGYGYLKEPLWW----AGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh-h-----------------cccccC--CCcchhhhHHHH----HHH
Confidence            4566889999999999999999998887665321 0                 000000  111111112233    345


Q ss_pred             hhhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658          258 VGSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       258 ~~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      +..+++-.+-+.+-...+++.++++..++.+.+.+++..+++|++++...+|+.+.++|-.+.....
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            5555666666666667788999999999999999999999999999999999999999987776443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.29  E-value=0.77  Score=39.75  Aligned_cols=137  Identities=12%  Similarity=0.114  Sum_probs=97.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHHHhhh-------cCCCCCCHHHHHHHH
Q 044658            5 RQWKPIIMMVAVNLGLAAANALLKKILDGG-LNHLVIVAYRQIIATIFLAPVAYFWER-------KSRPKLTVPILCQLF   76 (364)
Q Consensus         5 ~~~~~~l~~~l~~~~~~~~~~~~k~~~~~~-~~p~~~~~~r~~~~~l~l~~~~~~~~~-------~~~~~~~~~~~~~~~   76 (364)
                      +...|-++++++..+-|.....-...-.++ -+...+.+.--+.+++.+..-..+...       ..+.   +..|.-+.
T Consensus       169 t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~Rh---P~~~~~l~  245 (337)
T KOG1580|consen  169 TFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRH---PYVFWDLT  245 (337)
T ss_pred             ccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhc---cHHHHHHH
Confidence            345678888888888888877655443321 123344444444455544332221100       0111   23455566


Q ss_pred             HHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           77 FSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      ..++++ ++++.+-+.-..+-++-.-+++..+--+|+.+.++++++.+++.+|      |+|..+.+.|...=..
T Consensus       246 l~ai~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  246 LLAIAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHhh
Confidence            778887 9999999999999999999999999999999999999999999999      9999999999887664

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.78  E-value=1.4  Score=40.07  Aligned_cols=134  Identities=10%  Similarity=0.084  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHH--HHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHH--HHHHHh
Q 044658          183 IGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTA--IMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITI--IYSGVV  258 (364)
Q Consensus       183 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~  258 (364)
                      .....++.-+++..+-.+..|.....++-|..+..  .|.+.+.+.....-...-.+.+.......+-|..+  ++.+- 
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~-   90 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM-   90 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH-
Confidence            34555556666666666777877777664444444  78877776665554433223333333334445443  33222 


Q ss_pred             hhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhhee
Q 044658          259 GSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLW  322 (364)
Q Consensus       259 ~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~  322 (364)
                           ...-..++++++.....++....|++..+....++|.+++..-+....++++|......
T Consensus        91 -----i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   91 -----LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             -----HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence                 22335678999999999999999999999999999999999999999998888766653

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=92.92  E-value=1.1  Score=40.52  Aligned_cols=124  Identities=9%  Similarity=0.110  Sum_probs=86.1

Q ss_pred             HHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCc-ccccch-hhHHHHHHHHHhhhHHHHHHHHHHHhccCccee
Q 044658          202 QARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAG-WAMKGK-LEIITIIYSGVVGSGLCYVGMAWCVEQRGPVFT  279 (364)
Q Consensus       202 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~  279 (364)
                      .+...+.++=|...+..+..+-.+.........+..... ....+. ...-.+.-.| ++++.=..+-++++++++.+..
T Consensus        35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta-lata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA-LATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh-hhhhcccccccceeeeeeeeee
Confidence            344444444577777777776666665555554432111 111111 1222223444 3677777889999999999999


Q ss_pred             hcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCcc
Q 044658          280 SAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKSK  326 (364)
Q Consensus       280 s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~~  326 (364)
                      ++.-...+++.++++.++-=|+++|.-..-..+|.+|+++..+...+
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq  160 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ  160 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc
Confidence            99999999999999999889999999888888899999888875443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.84  E-value=0.85  Score=41.93  Aligned_cols=141  Identities=11%  Similarity=0.043  Sum_probs=86.6

Q ss_pred             CchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcCC---CcccccchhhHHHHHHHH
Q 044658          180 DWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVERNP---AGWAMKGKLEIITIIYSG  256 (364)
Q Consensus       180 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~  256 (364)
                      +-..|+++..+++++.+.+++-.||..+-   ..+.......+-+-+..|.....-.-+   +-....+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W---sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGW---SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            34789999999999999999988887543   233334333333334444433322111   112223334556666667


Q ss_pred             HhhhHHHHHHHHHHHhccCccee-hcchhhhHHHHHHHHHHHhcC-------CccchhhHHHHHHHHhhhhheecC
Q 044658          257 VVGSGLCYVGMAWCVEQRGPVFT-SAFTPLIQIFVAIVGFFILHE-------RIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       257 ~~~~~~~~~~~~~a~~~~~~~~~-s~~~~l~pv~~~~~~~~~l~e-------~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      ++ =+++-..|-.++|+++.+.. ++..-+..+++.++--++.|+       +-....++|.++.++|+.+..+.-
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            64 56777889999999986543 344445555555554444332       223467899999999999887643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.22  E-value=0.5  Score=41.89  Aligned_cols=141  Identities=21%  Similarity=0.196  Sum_probs=102.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHHHHHHhhh----cCCCCC-CHHHHHHHHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILDGGL-NHLVIVAYRQIIATIFLAPVAYFWER----KSRPKL-TVPILCQLFFSA   79 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g   79 (364)
                      ...|.++..++.+.-+...+..|.....-. --..++++.-+.+.++++|...+...    ...+.. ..+.|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            467999999999999999999997765311 26788889999999999998876432    122222 567788888888


Q ss_pred             HHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheecc
Q 044658           80 LTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYK  153 (364)
Q Consensus        80 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~  153 (364)
                      +++ +...+...+=++-+++-.--+-..--...=.+++..+++|..+...      |-+-++.+.|-..-++-+
T Consensus       263 lfg-F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  263 LFG-FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHH-HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHH
Confidence            887 4444444455565666544444444455566778899999999999      999988888888776543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=89.71  E-value=1.4  Score=37.95  Aligned_cols=111  Identities=15%  Similarity=0.193  Sum_probs=87.2

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccch
Q 044658           34 GLNHLVIVAYRQIIATIFLAPVAYFWERKSRP----KLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIV  109 (364)
Q Consensus        34 ~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~  109 (364)
                      +..-+...++.-+++..+++.+-...+.+...    ..+......+++.|++. ..-.++.-++++-++....++...+.
T Consensus       182 Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-vgiSy~saWcvrVtSSTtySMvGALN  260 (309)
T COG5070         182 NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-VGISYCSAWCVRVTSSTTYSMVGALN  260 (309)
T ss_pred             ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-hhhhhccceeEeehhhhHHHHHHHhh
Confidence            34577788888888888887776554432221    23445566778889987 77778888999988888889998898


Q ss_pred             hHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658          110 PVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus       110 pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      -.-.++.+.++++|+.+...      +.++++++...++-..
T Consensus       261 Klp~alaGlvffdap~nf~s------i~sillGflsg~iYav  296 (309)
T COG5070         261 KLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV  296 (309)
T ss_pred             hChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence            88999999999999999999      9999999887776654

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=87.47  E-value=0.13  Score=45.06  Aligned_cols=137  Identities=12%  Similarity=0.081  Sum_probs=96.3

Q ss_pred             chHHHHHHHHHHHHHHhHHHHHHHHhcc-CCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhh
Q 044658          181 WAIGSIVLIAFTVVWSSWFLIQARIGKK-YPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVG  259 (364)
Q Consensus       181 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  259 (364)
                      ..+|..++=.-.+|-......+..+.++ .+.|...++.....-+++-.++..+..+   ..    ...|-.-+.++. .
T Consensus        16 ~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~---~~----~~~~~hYilla~-~   87 (336)
T KOG2766|consen   16 TLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK---YI----KAKWRHYILLAF-V   87 (336)
T ss_pred             hhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH---HH----HHHHHHhhheeE-E
Confidence            3444444444444444444555555555 3357777777777777776666665431   11    123444555665 3


Q ss_pred             hHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecCc
Q 044658          260 SGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGKS  325 (364)
Q Consensus       260 ~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~~  325 (364)
                      -+=++++..+|-|+++.+.+..+..-..+...+++|++++.+-.+.++.|.++.++|+.+.....-
T Consensus        88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV  153 (336)
T KOG2766|consen   88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDV  153 (336)
T ss_pred             eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeee
Confidence            566787888999999999999999888999999999999999999999999999999988876543

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=85.19  E-value=1.2  Score=40.10  Aligned_cols=132  Identities=13%  Similarity=0.093  Sum_probs=72.9

Q ss_pred             HHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHh-hc-C------CCccc---ccchhhHHHHHHHHH
Q 044658          189 IAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIV-ER-N------PAGWA---MKGKLEIITIIYSGV  257 (364)
Q Consensus       189 l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~------~~~~~---~~~~~~~~~l~~~~~  257 (364)
                      +++.+||+-+-..+|...++.. ..+.+++-+.++.++...+.-+. +. .      +..+.   ..+...+.. ...|.
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~-A~aGG   79 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLF-AMAGG   79 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHH-HHHhh
Confidence            5678899988888887766532 22345566666555444433232 21 1      11111   111122222 23333


Q ss_pred             hhhHHHHHHHHHHHhccCcceehcch-hhhHHHHHHHHHHHhcCCcc--chhhHHHHHHHHhhhhheec
Q 044658          258 VGSGLCYVGMAWCVEQRGPVFTSAFT-PLIQIFVAIVGFFILHERIY--PGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       258 ~~~~~~~~~~~~a~~~~~~~~~s~~~-~l~pv~~~~~~~~~l~e~~~--~~~~~G~~li~~g~~l~~~~  323 (364)
                      +.--+++.+..+++...+.+.+-++. .+.-++++.+.+ ++..+.+  ..-..|..++++++++-...
T Consensus        80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~iLF~GV~cf~iAI~lga~a  147 (336)
T PF07168_consen   80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAEILFPGVACFLIAIILGAAA  147 (336)
T ss_pred             HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence            34557888899999888877665554 233344555555 3455544  24566888888877775433

Transport is dependent on glucose and a proton gradient [].

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=84.92  E-value=1.3  Score=39.56  Aligned_cols=65  Identities=17%  Similarity=0.085  Sum_probs=57.9

Q ss_pred             hhHHHHHHHHHHHhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheec
Q 044658          259 GSGLCYVGMAWCVEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWG  323 (364)
Q Consensus       259 ~~~~~~~~~~~a~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~  323 (364)
                      +-..+-.+.+.+++.++++..-++.--..+++-+++..+++.+++..||+|+..+.+|+......
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            45566777888999999999999999999999999999999999999999999999999887643

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=82.25  E-value=5.3  Score=35.57  Aligned_cols=140  Identities=16%  Similarity=0.137  Sum_probs=94.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC------CCCCHHHHHHHHHH
Q 044658            6 QWKPIIMMVAVNLGLAAANALLKKILD-GGLNHLVIVAYRQIIATIFLAPVAYFWERKSR------PKLTVPILCQLFFS   78 (364)
Q Consensus         6 ~~~~~l~~~l~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~------~~~~~~~~~~~~~~   78 (364)
                      +..|+.++-.+.++-+.-.-+-..... +.-+..+++++.+.++.++++....... ...      .+.+++...+.++.
T Consensus       188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTg-e~f~a~~fcaehp~~tyGy~~~~  266 (367)
T KOG1582|consen  188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTG-ELFSAWTFCAEHPVRTYGYAFLF  266 (367)
T ss_pred             ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcc-cchhhhHHHHhCcHhHHHHHHHH
Confidence            445665555555554444433333333 2345778888888888887776654321 111      12345677777777


Q ss_pred             HHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheecc
Q 044658           79 ALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYK  153 (364)
Q Consensus        79 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~  153 (364)
                      +..+ .++......=++.-.+..++.+...--..+.+++++++.++++.+.      .-+.++.+.|+++=...+
T Consensus       267 s~~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  267 SLAG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence            7766 6666555555566677777777778888999999999999999999      999999999999887544

>PRK02237 hypothetical protein; Provisional

Probab=81.66  E-value=8.6  Score=29.09  Aligned_cols=45  Identities=11%  Similarity=0.177  Sum_probs=38.9

Q ss_pred             hcchhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658          280 SAFTPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       280 s~~~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      +...-+-.+.++++++.+-|++|+...++|..+.++|+.++.+..
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            455667778899999999999999999999999999998887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	364
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.07
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.79
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.56
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.37

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.07  E-value=1.4e-10  Score=91.61  Aligned_cols=71  Identities=8%  Similarity=0.156  Sum_probs=54.3

Q ss_pred             HHHHhhhHHHHHHHHHHHhccCcceehcc-hhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658          254 YSGVVGSGLCYVGMAWCVEQRGPVFTSAF-TPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       254 ~~~~~~~~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      .++++++++++.++.+++++.+++.+..+ ..+.|+++++++++++||++++.+++|+++|++|+++....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35667889999999999999999999998 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.79  E-value=7.5e-08  Score=73.33  Aligned_cols=70  Identities=9%  Similarity=0.164  Sum_probs=64.3

Q ss_pred             HHHhhhHHHHHHHHHHHhccCcceehcc-hhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658          255 SGVVGSGLCYVGMAWCVEQRGPVFTSAF-TPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK  324 (364)
Q Consensus       255 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~  324 (364)
                      .++++..+++.++.+++|+.+.+.+..+ ..+.|+++.+++++++||++++.+++|+.+|++|+++....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5556788999999999999999999888 899999999999999999999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.56  E-value=3.1e-07  Score=69.92  Aligned_cols=69  Identities=16%  Similarity=0.302  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           77 FSALTGVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      ..+++...+++.++.+++++.|.+.+..+ ..+.|++++++++++++|+++..+      ++|+.+++.|+.++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            34555558899999999999999999888 799999999999999999999999      9999999999999974

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.37  E-value=2.3e-07  Score=73.15  Aligned_cols=69  Identities=16%  Similarity=0.302  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658           77 FSALTGVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL  151 (364)
Q Consensus        77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~  151 (364)
                      +.+++...+++.++.+++++.+++.+..+ .++.|++++++++++++|+++..+      ++|+.++++|++++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            35555568999999999999999999888 899999999999999999999999      9999999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00