Citrus Sinensis ID: 044747

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
MGSQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKKSASSIKAYCGI
ccccccccccEEEccccccccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccccccccccccccccccccccccEEEEccccccEEEEEccccEEEcccccccEEEEHHHHHHHHHccccccccccEEEccccccEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHcccccccccHHHHcccc
ccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHccccccEEEEEccEccccccccccccccccHHHcHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccEEEEcccccccccccccccccccccccEEEEEEcccccEEEEEEEcccEEEccccccEEEEEEccEEEEEEcccEEEEEEEEEEEcccccEEEEEEEEcccccccccHHHcccccccccccccHHHHHHHHHcccccccHHHHHHHccc
mgsqtkskipvidlskqdlksgtstwlsTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTeelfdvpieikvkntstkpyfeyygqytiiplyeslaidypdtrnatqsftnlmwpAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESygvegyydsyIGSVNYLLRYFkyrapepnetkmgltphtdktMTSIIHQINhinglqvqakdgewidvepspssfIVMAGDALMAwgndrirpcrhqvimdnasetRYSLGLfsfssgvvdipkelgdetqplkykpfdhfgflhfnqseegkkSASSIKAYCGI
mgsqtkskipvidlskqdlksgtstwLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASteelfdvpieikvkntstkpyfEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHfnqseegkksassikaycgi
MGSQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYsllesslsmselvvelDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKKSASSIKAYCGI
**********************TSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRA***************KTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHF*******************
*****KSKIPVIDLSKQDL*****TW**TCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKV***S*****EYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKKSASSIKAYCGI
********IPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHFNQ**********IKAYCGI
*****KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKKSASSIKAYCGI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGFLHFNQSEEGKKSASSIKAYCGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query322 2.2.26 [Sep-21-2011]
Q39110377 Gibberellin 20 oxidase 1 no no 0.885 0.755 0.285 4e-22
Q9C971355 Gibberellin 3-beta-dioxyg no no 0.763 0.692 0.271 3e-18
Q39224358 Protein SRG1 OS=Arabidops no no 0.798 0.717 0.265 4e-18
Q39111378 Gibberellin 20 oxidase 2 no no 0.863 0.735 0.261 2e-17
P93771372 Gibberellin 20 oxidase 1 no no 0.496 0.430 0.335 6e-16
Q9SKK4359 Probable 2-oxoacid depend no no 0.860 0.771 0.280 2e-15
Q84MB3365 1-aminocyclopropane-1-car no no 0.850 0.750 0.273 2e-14
Q8H1S4369 1-aminocyclopropane-1-car no no 0.841 0.734 0.249 1e-13
Q9LSW7365 1-aminocyclopropane-1-car no no 0.832 0.734 0.261 2e-13
Q39112380 Gibberellin 20 oxidase 3 no no 0.506 0.428 0.315 3e-13
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function desciption
 Score =  105 bits (263), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 148/308 (48%), Gaps = 23/308 (7%)

Query: 9   IPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDV 68
           +P+IDL  Q+L S  S+ L   + +  A ++ G F  +   IS+E  S+    T   FD+
Sbjct: 61  VPLIDL--QNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDM 118

Query: 69  PIE-----IKVKNTSTKPYFEYYGQY-TIIPLYESLAIDYPDTRNATQSFTNLMWPAEMI 122
           P+      ++    S      + G++ T +P  E+L+  + D  + ++S  +    A   
Sbjct: 119 PLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGH 178

Query: 123 AFGMICPYSLL--ESSLSMSELVVELDKMVTRMLFESYGVE-GYYDSYIGSVNYLLRYFK 179
            F    P+  +  E   +MS L ++    +  +L  S GV+  Y+  +    + ++R   
Sbjct: 179 GFQ---PFGKVYQEYCEAMSSLSLK----IMELLGLSLGVKRDYFREFFEENDSIMRLNY 231

Query: 180 YRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDA 239
           Y      +  +G  PH D T  +I+HQ +H+NGLQV  ++ +W  + P+P +F+V  GD 
Sbjct: 232 YPPCIKPDLTLGTGPHCDPTSLTILHQ-DHVNGLQVFVEN-QWRSIRPNPKAFVVNIGDT 289

Query: 240 LMAWGNDRIRPCRHQVIMDNASETRYSLGLF--SFSSGVVDIPKELGDETQPLKYKPFDH 297
            MA  NDR + C H+ ++++ SE R SL  F       VV  P+EL D     +Y  F  
Sbjct: 290 FMALSNDRYKSCLHRAVVNSESE-RKSLAFFLCPKKDRVVTPPRELLDSITSRRYPDFTW 348

Query: 298 FGFLHFNQ 305
             FL F Q
Sbjct: 349 SMFLEFTQ 356
Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton. GA53 is less effectively oxidized than GA12, and GA25 is also formed as a minor product.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9C971|G3OX4_ARATH Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1 Back     alignment and function description
>sp|P93771|GAOX1_ORYSJ Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|Q9SKK4|GSL_ARATH Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description
>sp|Q39112|GAOX3_ARATH Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query322
147852210311 hypothetical protein VITISV_028513 [Viti 0.965 1.0 0.509 5e-93
225442749311 PREDICTED: gibberellin 20 oxidase 1 [Vit 0.965 1.0 0.509 5e-93
147800974317 hypothetical protein VITISV_030994 [Viti 0.968 0.984 0.503 1e-91
225442757317 PREDICTED: gibberellin 3-beta-dioxygenas 0.968 0.984 0.5 6e-91
224054172313 2-oxoglutarate-dependent dioxygenase [Po 0.968 0.996 0.520 6e-91
225442753313 PREDICTED: gibberellin 20 oxidase 3-like 0.968 0.996 0.495 7e-88
297743339 461 unnamed protein product [Vitis vinifera] 0.968 0.676 0.495 9e-88
224054180313 2-oxoglutarate-dependent dioxygenase [Po 0.968 0.996 0.486 3e-86
255553011313 Gibberellin 20 oxidase, putative [Ricinu 0.968 0.996 0.495 5e-86
255553295307 Gibberellin 20 oxidase, putative [Ricinu 0.953 1.0 0.493 2e-85
>gi|147852210|emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 164/322 (50%), Positives = 224/322 (69%), Gaps = 11/322 (3%)

Query: 1   MGSQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLA 60
           MGS+   ++PV++ S   LK GT +WL  CKDV HA EE+GCF A+Y K+S E  +    
Sbjct: 1   MGSEA-PRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 61  STEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAE 120
             EELFD+P E KVKNTS KPYF Y GQ+ +IPL+ES+ I+   T    +SFTN+MWPA 
Sbjct: 60  QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 121 MIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKY 180
              F         E+ LS S+LV EL++MV +M+FESY  E YYDS+I S  YLLR  KY
Sbjct: 120 NDHF--------CETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKY 171

Query: 181 RAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDAL 240
           R P+ NET +G + HTDK+  +++HQ N + GL+++ KDGEWI  +PSPSS++VMAGDAL
Sbjct: 172 RGPQKNETCIGTSCHTDKSFITVLHQ-NEVCGLEIRTKDGEWISFKPSPSSYVVMAGDAL 230

Query: 241 MAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDHFGF 300
           +AW N RI    H+VIM N ++ RYS+GLF++  G+++IP+EL DE  PL++KPF+H+G 
Sbjct: 231 LAWSNGRIHSPEHRVIM-NGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGL 289

Query: 301 LHFNQSEEGKKSASSIKAYCGI 322
           LHF  + +  ++ S+ KAYCG+
Sbjct: 290 LHFYFTNKAGQTESTAKAYCGV 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225442749|ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera] gi|297743336|emb|CBI36203.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147800974|emb|CAN77851.1| hypothetical protein VITISV_030994 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442757|ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 [Vitis vinifera] gi|297743341|emb|CBI36208.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054172|ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222845385|gb|EEE82932.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225442753|ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297743339|emb|CBI36206.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054180|ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222845389|gb|EEE82936.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255553011|ref|XP_002517548.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223543180|gb|EEF44712.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255553295|ref|XP_002517690.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223543322|gb|EEF44854.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query322
TAIR|locus:2011581314 AT1G52800 [Arabidopsis thalian 0.965 0.990 0.467 7.9e-78
TAIR|locus:2011576310 AT1G52790 [Arabidopsis thalian 0.944 0.980 0.462 1.6e-70
TAIR|locus:2011506317 AT1G52820 [Arabidopsis thalian 0.968 0.984 0.434 3.5e-68
TAIR|locus:2139389322 AOP1 [Arabidopsis thaliana (ta 0.531 0.531 0.447 3.3e-57
TAIR|locus:2196618320 AT1G15540 [Arabidopsis thalian 0.978 0.984 0.392 3.6e-57
TAIR|locus:2034255320 AT1G80320 [Arabidopsis thalian 0.968 0.975 0.384 7.5e-57
TAIR|locus:2010474322 AT1G28030 [Arabidopsis thalian 0.962 0.962 0.334 1.2e-44
TAIR|locus:2139370361 AOP3 [Arabidopsis thaliana (ta 0.434 0.387 0.437 1.1e-40
TAIR|locus:2011586289 AT1G52810 [Arabidopsis thalian 0.493 0.550 0.339 9.4e-40
TAIR|locus:2121671324 AT4G23340 [Arabidopsis thalian 0.919 0.913 0.275 1.2e-24
TAIR|locus:2011581 AT1G52800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
 Identities = 152/325 (46%), Positives = 211/325 (64%)

Query:     1 MGSQTKS-KIPVIDL-SKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEV 58
             M S  K+ K+P++DL S+Q+LK  TSTW S  ++   A EE+GCF A+Y  ++Q+    +
Sbjct:     1 MASILKTTKVPILDLTSQQELKPNTSTWRSVSREACEALEEYGCFLAVYDGVTQQLDDSI 60

Query:    59 LASTEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWP 118
              A+ EELFD+P E K KN + KPY  Y GQ  +IPL+E L +DY   +   Q FT+LMWP
Sbjct:    61 FAAAEELFDLPTETKKKNVNEKPYHGYVGQMPVIPLHEGLGVDYVTNKEIAQRFTHLMWP 120

Query:   119 AEMIAFGMICPYXXXXXXXXXXXXXXXXDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYF 178
                  F   C                  D++V RM+FE+YGVE +Y+S++GS  YLL++ 
Sbjct:   121 QGNDRF---C-----NTVHTFSNAVAELDRLVVRMIFENYGVEKHYESHVGSKTYLLKFL 172

Query:   179 KYRAPEPNETKMGLTP-HTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAG 237
             KY AP P    M   P HTDKT  SI+HQ N +NGL+V++KDGEWI ++  P S++VMAG
Sbjct:   173 KYLAP-PESISMPAFPQHTDKTFLSILHQ-NDVNGLEVKSKDGEWISLQLPPKSYVVMAG 230

Query:   238 DALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDIPKELGDETQPLKYKPFDH 297
             D  M W NDRIR C H+V M+   +TRY+LGLFSF + +V IP+EL D+  PL YKPFD+
Sbjct:   231 DISMGWSNDRIRSCEHRVTMEG-DKTRYTLGLFSFLTDLVSIPEELVDDKHPLMYKPFDN 289

Query:   298 FGFLHFNQSEEGKKSASSIKAYCGI 322
                ++F  ++EG+++ S++KAYCGI
Sbjct:   290 IALINFYTTKEGREANSTLKAYCGI 314
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2011576 AT1G52790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011506 AT1G52820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139389 AOP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196618 AT1G15540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034255 AT1G80320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010474 AT1G28030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139370 AOP3 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011586 AT1G52810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121671 AT4G23340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.7LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00034484001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (311 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00007229001
SubName- Full=Chromosome undetermined scaffold_186, whole genome shotgun sequence; (178 aa)
  •     0.442
GSVIVG00015847001
SubName- Full=Chromosome chr2 scaffold_11, whole genome shotgun sequence; (257 aa)
  •     0.440
GSVIVG00020188001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (220 aa)
  •     0.405

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query322
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-24
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 3e-24
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 9e-23
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 9e-22
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-21
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-20
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 4e-19
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-17
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 5e-17
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-16
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-16
PLN02947374 PLN02947, PLN02947, oxidoreductase 6e-16
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 7e-16
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-15
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 4e-14
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-13
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-11
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-11
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-10
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-08
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-07
PLN02704335 PLN02704, PLN02704, flavonol synthase 7e-07
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 7e-07
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 8e-07
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-06
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 4e-06
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 0.004
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information 
 Score =  101 bits (253), Expect = 2e-24
 Identities = 80/313 (25%), Positives = 120/313 (38%), Gaps = 51/313 (16%)

Query: 2   GSQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLAS 61
            S T   IPVIDLS  +              + HA E +G F+     I      ++ + 
Sbjct: 50  PSTTDESIPVIDLSDPN----------ALTLIGHACETWGVFQVTNHGIPLSLLDDIESQ 99

Query: 62  TEELFDVPIEIKVKNTSTKPYFEYYGQYTIIPL------YESLAIDYPDTRNATQSFTNL 115
           T  LF +P + K+K   +      YG   I          E   I      +A Q     
Sbjct: 100 TRRLFSLPAQRKLKAARSPDGVSGYGVARISSFFNKKMWSEGFTIMGSPLEHARQ----- 154

Query: 116 MWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTR---MLFESYGVE-------GYYD 165
           +WP +   F  +           M E   E+ K+  R   ++  S G+        G   
Sbjct: 155 LWPQDHTKFCDV-----------MEEYQKEMKKLAERLMWLMLGSLGITEEDIKWAGPKS 203

Query: 166 SYIGSVNYLLRYFKYRA-PEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWID 224
                    L+   Y   P+P+   MGL PHTD ++ +I++Q ++ +GLQV  +   W+ 
Sbjct: 204 GS-QGAQAALQLNSYPVCPDPDRA-MGLAPHTDSSLLTILYQ-SNTSGLQVFREGVGWVT 260

Query: 225 VEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSGVVDI---PK 281
           V P P S +V  GD L    N R     H+ ++ N +  R S+  F      V I   PK
Sbjct: 261 VPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVV-NKTRHRISVAYFYGPPSDVQISPLPK 319

Query: 282 ELGDETQPLKYKP 294
            L D   P  Y+ 
Sbjct: 320 -LVDPNHPPLYRS 331

Length = 358
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 322
PLN02276361 gibberellin 20-oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02947374 oxidoreductase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.79
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.69
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.58
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.57
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 89.52
TIGR02466201 conserved hypothetical protein. This family consis 86.82
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 80.32
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information 
Probab=100.00  E-value=1.7e-75  Score=550.70  Aligned_cols=301  Identities=26%  Similarity=0.448  Sum_probs=260.9

Q ss_pred             CCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCceee
Q 044747            7 SKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFEY   85 (322)
Q Consensus         7 ~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY   85 (322)
                      .+||+|||+.+ ..++.+++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||
T Consensus        39 ~~iPvIDls~~-~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY  117 (361)
T PLN02276         39 LAVPLIDLGGF-LSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGY  117 (361)
T ss_pred             CCCCeEEChhh-cCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccc
Confidence            57999999985 2333445788999999999999999999999999999999999999999999999998754 367899


Q ss_pred             eecCC-----CCCceeeeecCCCCCch---hhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044747           86 YGQYT-----IIPLYESLAIDYPDTRN---ATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLFES  157 (322)
Q Consensus        86 ~~~~~-----~~d~~E~~~~~~~~~~~---~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~~~  157 (322)
                      .+.+.     ..|++|.|.++......   ....+.+|.||...++|+        +.+++|+..|.+|+..||++|+++
T Consensus       118 ~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr--------~~~~~y~~~~~~l~~~ll~~la~~  189 (361)
T PLN02276        118 ASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFG--------KVYQEYCEAMKTLSLKIMELLGIS  189 (361)
T ss_pred             CccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            86543     24799999886422111   111234567887667788        999999999999999999999999


Q ss_pred             cCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEeEh
Q 044747          158 YGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMA  236 (322)
Q Consensus       158 Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vVnv  236 (322)
                      ||++ ++|.+++..+.+.||++|||+++.++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|+||++|||+
T Consensus       190 Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q-d~v~GLQV~-~~g~Wi~V~p~pgalVVNi  267 (361)
T PLN02276        190 LGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQ-DQVGGLQVF-VDNKWRSVRPRPGALVVNI  267 (361)
T ss_pred             cCCCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEe-cCCCceEEE-ECCEEEEcCCCCCeEEEEc
Confidence            9999 889988888889999999999988888899999999999999999 899999997 7899999999999999999


Q ss_pred             hHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCCCccHHHHHHHHhhh--ccCCc
Q 044747          237 GDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYKPFDHFGFLHFNQSE--EGKKS  312 (322)
Q Consensus       237 Gd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~--~g~~~  312 (322)
                      ||+||+||||+||||+|||+. ++..+||||+||++|+.  +|.|+++|+++++|++|+++|++||++.+.+.  .++..
T Consensus       268 GD~L~~~TNG~~kSt~HRVv~-~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~  346 (361)
T PLN02276        268 GDTFMALSNGRYKSCLHRAVV-NSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNT  346 (361)
T ss_pred             HHHHHHHhCCccccccceeec-CCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhH
Confidence            999999999999999999998 66789999999999998  99999999999999999999999999987764  34444


Q ss_pred             ccccccc
Q 044747          313 ASSIKAY  319 (322)
Q Consensus       313 ~~~~~~~  319 (322)
                      ++.++.|
T Consensus       347 l~~~~~~  353 (361)
T PLN02276        347 LQAFSNW  353 (361)
T ss_pred             HHHHHHH
Confidence            4554443

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query322
1w9y_A319 The Structure Of Acc Oxidase Length = 319 3e-08
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 7e-06
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 8e-06
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-05
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-04
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 8e-04
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 153 MLFESYGVEGYY--DSYIGSV--NYLLRYFKYR-APEPNETKMGLTPHTDKTMTSIIHQI 207
           +L E+ G+E  Y  +++ GS   N+  +   Y   P+P+  K GL  HTD     ++ Q 
Sbjct: 131 LLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIK-GLRAHTDAGGIILLFQD 189
Query: 208 NHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSL 267
           + ++GLQ+  KDG+WIDV P   S +V  GD L    N + +   H+VI       R SL
Sbjct: 190 DKVSGLQL-LKDGQWIDVPPXRHSIVVNLGDQLEVITNGKYKSVXHRVIAQKDG-ARXSL 247
Query: 268 GLF 270
             F
Sbjct: 248 ASF 250
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query322
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 2e-38
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 7e-38
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 4e-33
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 8e-33
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 6e-30
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 8e-30
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  138 bits (349), Expect = 2e-38
 Identities = 66/327 (20%), Positives = 127/327 (38%), Gaps = 27/327 (8%)

Query: 3   SQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLAST 62
            +   ++P IDL   +         +  ++++ A  ++G    I   I  +    V  + 
Sbjct: 41  KEDGPQVPTIDLKNIESDDEKIR-ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAG 99

Query: 63  EELFDVPIEIKVKNTSTKPY--FEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAE 120
           EE F + +E K K  + +     + YG         S  +++ D       F +L +P E
Sbjct: 100 EEFFSLSVEEKEKYANDQATGKIQGYGSKLA--NNASGQLEWEDY------FFHLAYPEE 151

Query: 121 MIAFGMI--CPYSLLESSLSMSELVVELDKMVTRMLFESYGVE-GYYDSYIGSVNYLLRY 177
                +    P   +E++   ++ +  L   V + L    G+E    +  +G +  LL  
Sbjct: 152 KRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQ 211

Query: 178 FK---YRA-PEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFI 233
            K   Y   P+P    +G+  HTD +  + I   N + GLQ+   +G+W+  +  P S +
Sbjct: 212 MKINYYPKCPQPELA-LGVEAHTDVSALTFILH-NMVPGLQLF-YEGKWVTAKCVPDSIV 268

Query: 234 VMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLF---SFSSGVVDIPKELGDETQPL 290
           +  GD L    N + +   H+ ++ N  + R S  +F        V+    E+     P 
Sbjct: 269 MHIGDTLEILSNGKYKSILHRGLV-NKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPA 327

Query: 291 KYKPFDHFGFLHFNQSEEGKKSASSIK 317
           K+ P      +       GK+    + 
Sbjct: 328 KFPPRTFAQHIEHKL--FGKEQEELVS 352
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query322
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.09
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.58
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 89.09
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.66
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 86.64
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=5.2e-78  Score=558.22  Aligned_cols=291  Identities=18%  Similarity=0.271  Sum_probs=258.7

Q ss_pred             CCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC-CCcee
Q 044747            6 KSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTST-KPYFE   84 (322)
Q Consensus         6 ~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G   84 (322)
                      +.+||||||+.+  .   .++++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+|
T Consensus         4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~G   78 (312)
T 3oox_A            4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARG   78 (312)
T ss_dssp             CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSE
T ss_pred             CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccc
Confidence            568999999974  2   14678999999999999999999999999999999999999999999999999864 46799


Q ss_pred             eeecCC-------CCCceeeeecCCCCC--chhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 044747           85 YYGQYT-------IIPLYESLAIDYPDT--RNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRMLF  155 (322)
Q Consensus        85 Y~~~~~-------~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l~  155 (322)
                      |.+.+.       ..|++|.|.++....  ......+.+|.||+.+|+||        +++++|+++|.+|+.+||++|+
T Consensus        79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr--------~~~~~y~~~~~~l~~~ll~~la  150 (312)
T 3oox_A           79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFK--------HDVSWLYNSLDGMGGKVLEAIA  150 (312)
T ss_dssp             EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHH--------HHHHHHHHHHHHHHHHHHHHHH
Confidence            987653       258999998865322  12223456789999999999        9999999999999999999999


Q ss_pred             HHcCCC-CcchhhhcCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCCeEEe
Q 044747          156 ESYGVE-GYYDSYIGSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIV  234 (322)
Q Consensus       156 ~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g~~vV  234 (322)
                      ++||++ ++|.+.+..+.+.||++||||++.++..+|+++|||+|+||||+| |+++||||++++|+|++|+|+||++||
T Consensus       151 ~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vV  229 (312)
T 3oox_A          151 TYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVI  229 (312)
T ss_dssp             HHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEE
T ss_pred             HHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEE
Confidence            999999 899998888889999999999987555599999999999999999 889999999999999999999999999


Q ss_pred             EhhHHHHHHhCCCccCCCceeecCC---CCCceEEEEeccCCCc--ceeCCCCCCCCCCCCCCC-CccHHHHHHHHhhhc
Q 044747          235 MAGDALMAWGNDRIRPCRHQVIMDN---ASETRYSLGLFSFSSG--VVDIPKELGDETQPLKYK-PFDHFGFLHFNQSEE  308 (322)
Q Consensus       235 nvGd~l~~~TnG~~ks~~HRVv~~~---~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~~~  308 (322)
                      |+||+||+||||+||||+|||+.++   ...+|||++||++|+.  +|.|+++|+++++|++|+ ++|++||+..|+++.
T Consensus       230 NiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~  309 (312)
T 3oox_A          230 NIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI  309 (312)
T ss_dssp             EECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred             EhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence            9999999999999999999999843   2567999999999998  999999999999999999 999999999999987


Q ss_pred             cC
Q 044747          309 GK  310 (322)
Q Consensus       309 g~  310 (322)
                      |.
T Consensus       310 ~l  311 (312)
T 3oox_A          310 KL  311 (312)
T ss_dssp             C-
T ss_pred             cc
Confidence            75
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 322
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-33
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-28
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-24
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-17
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  124 bits (311), Expect = 1e-33
 Identities = 47/296 (15%), Positives = 102/296 (34%), Gaps = 7/296 (2%)

Query: 3   SQTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLAST 62
            +   ++P IDL   +         +  ++++ A  ++G    I   I  +    V  + 
Sbjct: 40  KEDGPQVPTIDLKNIE-SDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAG 98

Query: 63  EELFDVPIEIKVKNTSTKPYFEYYGQYTIIPLYESLAIDYPDTRNATQSFTNLMWPAEMI 122
           EE F + +E K K  + +   +  G  + +    S  +++ D              +   
Sbjct: 99  EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 158

Query: 123 AFGMICPYSLLESSLSMSELVVELDKMVTRMLFESYGVEGYYDSYIGSVNYLLRYFKYRA 182
                   +  E +  +  L  ++ K ++  L             +  +   ++   Y  
Sbjct: 159 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPK 218

Query: 183 PEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPSSFIVMAGDALMA 242
               E  +G+  HTD +  + I              +G+W+  +  P S ++  GD L  
Sbjct: 219 CPQPELALGVEAHTDVSALTFILHNMV--PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEI 276

Query: 243 WGNDRIRPCRHQVIMDNASETRYSLGLF---SFSSGVVDIPKELGDETQPLKYKPF 295
             N + +   H+ ++ N  + R S  +F        V+    E+     P K+ P 
Sbjct: 277 LSNGKYKSILHRGLV-NKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPR 331
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query322
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.88
d2csga1417 Hypothetical protein YbiU {Salmonella typhimurium 85.11
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-71  Score=521.04  Aligned_cols=286  Identities=19%  Similarity=0.317  Sum_probs=244.2

Q ss_pred             CCCCCCCEEEcCCCCCcCCchhHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC---
Q 044747            4 QTKSKIPVIDLSKQDLKSGTSTWLSTCKDVRHAFEEFGCFEAIYQKISQEFRSEVLASTEELFDVPIEIKVKNTSTK---   80 (322)
Q Consensus         4 ~~~~~iPvIDls~l~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---   80 (322)
                      .+..+||||||+.+ ..++...|++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++....   
T Consensus        41 ~~~~~IPvIDls~l-~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~  119 (349)
T d1gp6a_          41 EDGPQVPTIDLKNI-ESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATG  119 (349)
T ss_dssp             CCSCCCCEEECTTT-TCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGT
T ss_pred             CCCCCcCeEEChhc-CCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccC
Confidence            45678999999985 23334458899999999999999999999999999999999999999999999999997643   


Q ss_pred             CceeeeecCC-----CCCceeeee-cCCCCCchhhhcccCCCCCCccccccccCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 044747           81 PYFEYYGQYT-----IIPLYESLA-IDYPDTRNATQSFTNLMWPAEMIAFGMICPYSLLESSLSMSELVVELDKMVTRML  154 (322)
Q Consensus        81 ~~~GY~~~~~-----~~d~~E~~~-~~~~~~~~~~~~~~~~~wP~~~p~f~~~~p~~~~~~~~~y~~~~~~l~~~ll~~l  154 (322)
                      .+.||.....     ..++.+.+. ....     ......|.||+..|.|+        +.+++|+++|.+++.+|++++
T Consensus       120 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~n~wp~~~~~f~--------e~~~~~~~~~~~la~~ll~~l  186 (349)
T d1gp6a_         120 KIQGYGSKLANNASGQLEWEDYFFHLAYP-----EEKRDLSIWPKTPSDYI--------EATSEYAKCLRLLATKVFKAL  186 (349)
T ss_dssp             BCSEEECCCCCSTTCCCCSCEEEEEEEES-----GGGCCGGGSCCSSTTHH--------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cccccccccccccccccchhhhhcccccc-----cccccccccccccchHH--------HHHHHHHHHHHHHHHhhhHHH
Confidence            2344433221     112222221 1111     12234578999999999        999999999999999999999


Q ss_pred             HHHcCCC-Ccchhhh---cCcceeeecccccCCCCCCCCCccccccCCCCceEEeeCCCCCceEEEcCCCCeEEcCCCCC
Q 044747          155 FESYGVE-GYYDSYI---GSVNYLLRYFKYRAPEPNETKMGLTPHTDKTMTSIIHQINHINGLQVQAKDGEWIDVEPSPS  230 (322)
Q Consensus       155 ~~~Lgl~-~~~~~~~---~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~d~~~GLqv~~~~g~W~~V~p~~g  230 (322)
                      +++||++ ++|.+.+   ..+.+.||++|||+++.+...+|+++|||+|+||||+| |.++||||+ .+|+|++|+|.+|
T Consensus       187 a~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q-~~~~GLqv~-~~g~W~~V~p~~~  264 (349)
T d1gp6a_         187 SVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLF-YEGKWVTAKCVPD  264 (349)
T ss_dssp             HHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE-CSCCCEEEE-ETTEEEECCCCTT
T ss_pred             HHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec-cCCcceeee-cCCceEEccCCCC
Confidence            9999999 7887665   34677899999999988888999999999999999999 999999995 6899999999999


Q ss_pred             eEEeEhhHHHHHHhCCCccCCCceeecCCCCCceEEEEeccCCCc--ce-eCCCCCCCCCCCCCCCCccHHHHHHHHhh
Q 044747          231 SFIVMAGDALMAWGNDRIRPCRHQVIMDNASETRYSLGLFSFSSG--VV-DIPKELGDETQPLKYKPFDHFGFLHFNQS  306 (322)
Q Consensus       231 ~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~~R~Si~~F~~P~~--~i-~p~~~~~~~~~p~~y~~~t~~e~~~~~~~  306 (322)
                      ++|||+||+||+||||+||||+|||+. +++++||||+||++|+.  +| .|+++|+++++|++|+|||++||++.|+.
T Consensus       265 a~vVNvGD~l~~~TnG~~~St~HRVv~-~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         265 SIVMHIGDTLEILSNGKYKSILHRGLV-NKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             CEEEEECHHHHHHTTTSSCCCCEEECC-CSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             CeeeeHHhHHHHHhCCCccCcCccccC-CCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHHHh
Confidence            999999999999999999999999999 66789999999999987  54 89999999999999999999999999985
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure