Citrus Sinensis ID: 044881
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 241 | ||||||
| 255555653 | 261 | conserved hypothetical protein [Ricinus | 0.962 | 0.888 | 0.739 | 2e-92 | |
| 225426236 | 260 | PREDICTED: bidirectional sugar transport | 0.983 | 0.911 | 0.673 | 2e-90 | |
| 356577487 | 256 | PREDICTED: bidirectional sugar transport | 0.987 | 0.929 | 0.663 | 6e-89 | |
| 356551255 | 257 | PREDICTED: bidirectional sugar transport | 0.991 | 0.929 | 0.668 | 2e-83 | |
| 357462365 | 263 | hypothetical protein MTR_3g080990 [Medic | 0.966 | 0.885 | 0.641 | 1e-81 | |
| 388498156 | 263 | unknown [Medicago truncatula] | 0.966 | 0.885 | 0.641 | 1e-81 | |
| 224075142 | 255 | predicted protein [Populus trichocarpa] | 0.983 | 0.929 | 0.639 | 1e-81 | |
| 388506664 | 263 | unknown [Medicago truncatula] | 0.966 | 0.885 | 0.641 | 1e-81 | |
| 449452222 | 265 | PREDICTED: bidirectional sugar transport | 0.979 | 0.890 | 0.690 | 2e-81 | |
| 356523628 | 247 | PREDICTED: bidirectional sugar transport | 0.937 | 0.914 | 0.676 | 7e-81 |
| >gi|255555653|ref|XP_002518862.1| conserved hypothetical protein [Ricinus communis] gi|223541849|gb|EEF43395.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/234 (73%), Positives = 208/234 (88%), Gaps = 2/234 (0%)
Query: 1 NIISLFLFLSPVPTFVEIVKKGTVEQYSAAPYLATLLNCMVWVLYGLPMVHPHSILVITI 60
NIIS FLFLSPVPTF++I KK VEQYSA PYLATL+NCMVWVLYGLPMVHP+S+LVITI
Sbjct: 16 NIISFFLFLSPVPTFIQIWKKRAVEQYSATPYLATLVNCMVWVLYGLPMVHPNSLLVITI 75
Query: 61 NGSGTAIEVVYIILFVLHSDKKKRIKVMLVVLVEVIFVALVALLVLTLLHSTKQRSMAVG 120
NG+GTAIE++Y+I+F+++SDKKKR+KV+L VLVEVIFVA++ALLVLTL H+TK+RSM VG
Sbjct: 76 NGTGTAIEILYLIIFIVYSDKKKRLKVVLAVLVEVIFVAVLALLVLTLAHTTKKRSMIVG 135
Query: 121 IICILFNIMMYASPLSVMKLVITTKSVEYMPFFLSLMSLANGIAWTTYAFLPFDQFIAIP 180
+CI FNIMMYASPLS+MK+VITTKSVEYMPFFLSL SLANG+AW++YAF+ FD FI IP
Sbjct: 136 FVCICFNIMMYASPLSIMKMVITTKSVEYMPFFLSLASLANGVAWSSYAFIRFDPFIFIP 195
Query: 181 NGLGTLLGVAQVILYACYYKSTKRQMAARQGKGQVDLSAVVVSESDSGDSKKIG 234
NGLGTL +AQ+ LYA +YKSTKRQ+ ARQGK +V LS VVV + +G+SK+ G
Sbjct: 196 NGLGTLFALAQLALYAVFYKSTKRQIEARQGKAEVGLSEVVV--NGNGNSKRTG 247
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426236|ref|XP_002263697.1| PREDICTED: bidirectional sugar transporter SWEET4 [Vitis vinifera] gi|297742391|emb|CBI34540.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356577487|ref|XP_003556856.1| PREDICTED: bidirectional sugar transporter SWEET4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356551255|ref|XP_003543992.1| PREDICTED: bidirectional sugar transporter SWEET4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357462365|ref|XP_003601464.1| hypothetical protein MTR_3g080990 [Medicago truncatula] gi|355490512|gb|AES71715.1| hypothetical protein MTR_3g080990 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388498156|gb|AFK37144.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224075142|ref|XP_002304566.1| predicted protein [Populus trichocarpa] gi|222841998|gb|EEE79545.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|388506664|gb|AFK41398.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449452222|ref|XP_004143859.1| PREDICTED: bidirectional sugar transporter SWEET4-like [Cucumis sativus] gi|449518753|ref|XP_004166400.1| PREDICTED: bidirectional sugar transporter SWEET4-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356523628|ref|XP_003530439.1| PREDICTED: bidirectional sugar transporter SWEET4-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 241 | ||||||
| UNIPROTKB|A2X3S3 | 259 | SWEET4 "Bidirectional sugar tr | 0.995 | 0.926 | 0.545 | 4.2e-63 | |
| UNIPROTKB|Q6K4V2 | 259 | SWEET4 "Bidirectional sugar tr | 0.995 | 0.926 | 0.545 | 4.2e-63 | |
| TAIR|locus:2123426 | 258 | SWEET7 [Arabidopsis thaliana ( | 0.962 | 0.899 | 0.531 | 8.8e-63 | |
| UNIPROTKB|A2WSD8 | 259 | SWEET6A "Bidirectional sugar t | 0.979 | 0.911 | 0.485 | 2.5e-58 | |
| UNIPROTKB|Q8LR09 | 259 | SWEET6A "Bidirectional sugar t | 0.979 | 0.911 | 0.485 | 2.5e-58 | |
| UNIPROTKB|Q8W0K2 | 254 | SWEET6B "Bidirectional sugar t | 0.954 | 0.905 | 0.497 | 1.4e-57 | |
| UNIPROTKB|A2WSD3 | 254 | SWEET6B "Bidirectional sugar t | 0.954 | 0.905 | 0.484 | 2.5e-56 | |
| UNIPROTKB|Q6L568 | 237 | SWEET5 "Bidirectional sugar tr | 0.912 | 0.928 | 0.511 | 3.3e-56 | |
| TAIR|locus:2033319 | 261 | SWEET6 [Arabidopsis thaliana ( | 0.941 | 0.869 | 0.502 | 8.6e-56 | |
| TAIR|locus:505006381 | 251 | SWEET4 [Arabidopsis thaliana ( | 0.966 | 0.928 | 0.470 | 2.9e-55 |
| UNIPROTKB|A2X3S3 SWEET4 "Bidirectional sugar transporter SWEET4" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 132/242 (54%), Positives = 161/242 (66%)
Query: 1 NIISLFLFLSPVPTFVEIVKKGTVEQYSAAPYLATLLNCMVWVLYGLPMVHPHSILVITI 60
N +L LFLSPVPTF+ I KKG+VEQYSA PY+ATLLNCM+WVLYGLP VHPHS+LVITI
Sbjct: 16 NGTALVLFLSPVPTFIRIWKKGSVEQYSAVPYVATLLNCMMWVLYGLPAVHPHSMLVITI 75
Query: 61 NGSGTAIEVVYIILFVLHSDKKKRIKXXXXXXXXXXXXXXXXXXXXXXXHSTKQRSMAVG 120
NG+G AIE+ YI LF+ S R + H+ ++RSM VG
Sbjct: 76 NGTGMAIELTYIALFLAFSLGAVRRRVLLLLAAEVAFVAAVAALVLNLAHTHERRSMIVG 135
Query: 121 IICILFNIMMYASPLSVMKLVITTKSVEYMPFFLSLMSLANGIAWTTYAFLPFDQFIAIP 180
I+C+LF MYA+PLSVMK+VI TKSVEYMP FLSL SL NGI WT YA + FD +I IP
Sbjct: 136 ILCVLFGTGMYAAPLSVMKMVIQTKSVEYMPLFLSLASLVNGICWTAYALIRFDLYITIP 195
Query: 181 NGLGTLLGVAQVILYACYYKSTKRQMAARQGK--GQVDLSAVVVSESDSGDSKKIGTAVG 238
NGLG + VAQ+ILYA YYKST++ + AR+ K V ++ VVV + + S A
Sbjct: 196 NGLGVMFAVAQLILYAIYYKSTQQIIEARKRKEADHVAMTDVVVDSAKNNPSSGAAAAAA 255
Query: 239 GG 240
G
Sbjct: 256 NG 257
|
|
| UNIPROTKB|Q6K4V2 SWEET4 "Bidirectional sugar transporter SWEET4" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2123426 SWEET7 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2WSD8 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8LR09 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2WSD3 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L568 SWEET5 "Bidirectional sugar transporter SWEET5" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2033319 SWEET6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:505006381 SWEET4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 241 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 1e-27 | |
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 8e-15 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-27
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 119 VGIICILFNIMMYASPLSVMKLVITTKSVEYMPFFLSLMSLANGIAWTTYAFLPFDQFIA 178
+G++C++F++ ++ SPLS+++ VI TKSVE MPF L L + W Y L D +I
Sbjct: 3 LGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGYII 62
Query: 179 IPNGLGTLLGVAQVILYACYYKSTK 203
IPNG+G +LG +IL+ Y
Sbjct: 63 IPNGVGCVLGTIYLILFIIYPPKKA 87
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 241 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.86 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.79 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.46 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.24 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.14 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 98.73 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 98.19 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 97.99 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 97.93 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 96.72 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 96.2 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 95.66 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 94.32 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 94.16 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 93.72 | |
| PHA02246 | 192 | hypothetical protein | 91.96 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 90.29 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 88.03 | |
| PHA02246 | 192 | hypothetical protein | 86.8 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 84.15 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 82.01 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=321.17 Aligned_cols=198 Identities=50% Similarity=0.832 Sum_probs=178.2
Q ss_pred CeeehhHHhccHHHHHHHHHhCCCCCcCchhHHHHHHHHHHHHHHhcccccCCCeEEehhhHHHHHHHHHHHHHhhhccC
Q 044881 1 NIISLFLFLSPVPTFVEIVKKGTVEQYSAAPYLATLLNCMVWVLYGLPMVHPHSILVITINGSGTAIEVVYIILFVLHSD 80 (241)
Q Consensus 1 ~v~sv~~~~Splp~~~~I~k~kstg~~s~~p~~~~~~n~~lWl~YG~~~l~~~~~~li~~N~~G~~l~~~y~~v~~~y~~ 80 (241)
|++|++++++|+|+++||+|+||+|+.|..||+++++||.+|+.||+ +++++..++.+|.+|+++.++|+..|+.|++
T Consensus 14 ~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~--~~~~d~llitIN~~G~~ie~~Yi~~f~~ya~ 91 (243)
T KOG1623|consen 14 NIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGL--LKVHDYLLITINGIGLVIETVYISIFLYYAP 91 (243)
T ss_pred HHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhh--hccCceEEEEEehhcHHHHHHHHHHHheecC
Confidence 57899999999999999999999999999999999999999999998 6765788999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhHHHHHHHHHHHhhhhhhhhhhhccCCcccchhHHHHHHHH
Q 044881 81 KKKRIKVMLVVLVEVIFVALVALLVLTLLHSTKQRSMAVGIICILFNIMMYASPLSVMKLVITTKSVEYMPFFLSLMSLA 160 (241)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~a~~~si~~~~sPL~~i~~Viktkst~~i~~~~~~~~~~ 160 (241)
+|++.+.. ....+.++.+..++++...++++++.+.+|.+|.+++++||+|||..+++|+|+||+|.||++++++.++
T Consensus 92 ~k~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl 169 (243)
T KOG1623|consen 92 KKKTVKIV--LALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFL 169 (243)
T ss_pred chheeEee--ehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHH
Confidence 88733222 1223334444445566677888888999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhcccCCCeeEEechhHHHHHHHHHhhheeEEeCCc
Q 044881 161 NGIAWTTYAFLPFDQFIAIPNGLGTLLGVAQVILYACYYKST 202 (241)
Q Consensus 161 n~~lW~~YG~l~~d~~i~~~N~~G~~l~~~ql~l~~~y~~~~ 202 (241)
++..|++||++++|.++.+||++|++++.+|+.+|++|++++
T Consensus 170 ~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~ 211 (243)
T KOG1623|consen 170 VAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTT 211 (243)
T ss_pred HHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCc
Confidence 999999999999999999999999999999999999999877
|
|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
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| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
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| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00